pycom08g14920

Phosphopantothenate-cysteine ligase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
14350905 .. 14354696
3792 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g14920.8

Sequence Viewer

Length: 1194 bp
ATGTTTAAATATTTGATCTTCATATTTAACCGTTCACAGTCACGTCTTTATCCGTTGATATTCATCGATTATAATATTTTCGCGGGAATCAACGGCTACGAAACACTTCATCCTTCCATTCTTCCCAGAAGTTTGAATCGCCGAATCGAAAGACAAACCCACTTCGATTTTCATCAGCTGCTCTCAGCTCTCTCACTCCAGGAATTGGAGGTAGGGAAATCTCAAATGGCTCTAACAAATGGGTTGGAAGTTCAAAGGGAAATCCTGGATGCCGAAATCAAGTCATTTTTTGACTCAGCTCCTCCTTTGAAGGACAGTGATGATATCAGTGGAAAACTTGAGGAATTTGTGAAGAAGAATTCAGTACCTTCCGAAAGTGGAGGAGTTAGGAGGGTTGTGTGTGTGACATCAGGTGGCACTACGGTTCCTCTAGAGCAACGATGTGTTCGCTACATTGACAACTTTAGCTCAGGTCACAGAGGAGCGGCATCCACAGAGTACTTTTTGAAGGCAGGTTATGCTGTTATCTTTCTATATCGAAGGGGTAGTTGCCAGCCATATTGCAGATCTCTTCCCGATGATCCTTTGCTTGAAAGTTTTGAATATACAGATGACTCAAATATTAAAGTGTGCCAGTCGCATTCAGAAGTAGTGAGGAATGCCATCACTAAAACTCATGCTGCAGTAACAGGAGGCCTCTTGTTGAAACTTCCTTTCACAACCATATTCGAGTATCTTCAGATGATTGCGTTTTCAATAAGAAGTCTCGGGCCACATGCAATTCTTTATCTTGCAGCTGCAGTGTCTGACTTTTATGTTCCCTGGAAAAGCATGGCAGAACACAAAATTCAGTCGGGATCTGGTCCATTGGACATGCGACTTGTTCAGGTGCCAAAGATGCTCTTAGTGCTGAGGAAAGACTGGGCGCCAAGGGCCTTCTGTATATCATTTAAGCTGGAGACGGATTCAAAGATTCTTTTAGAGAAGGCTGATATGGCTCTTCAGAAGTACAAGGTGCATATGGTTGTAGCGAATGAACTTTCAACCCGCAAGGAAGAGGTTGTAGTCGTCAGAAGTAACGAAAAGATATCAGTTCGCCGAAACCAATCTCCGGGTGTTGTTGATGTGGAGTGTCCACTAATTGAACTTATTGTGGGAAGACATTCTGCGTATATCGAGAATCCTGATCTATGA

Protein Analysis

398

Amino Acids

44.88

Weight (kDa)

8.07

Isoelectric Point (pI)

50.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 72
Acc36I ACCTGC 1 cut(s) 503
AccB1I GGYRCC 2 cut(s) 889, 925
AccB7I CCANNNNNTGG 1 cut(s) 205
AccBSI CCGCTC 1 cut(s) 485
AccII CGCG 1 cut(s) 83
AciI CCGC 3 cut(s) 83, 485, 1048
AclWI GGATC 2 cut(s) 575, 865
AcsI RAATTY 3 cut(s) 344, 358, 846
AcuI CTGAAG 2 cut(s) 722, 986
AcyI GRCGYC 1 cut(s) 926
AfaI GTAC 3 cut(s) 366, 500, 1010
AfiI CCNNNNNNNGG 2 cut(s) 205, 1111
AjiI CACGTC 1 cut(s) 44
AjnI CCWGG 3 cut(s) 198, 264, 821
AluBI AGCT 6 cut(s) 178, 188, 299, 468, 797, 955
AluI AGCT 6 cut(s) 178, 188, 299, 468, 797, 955
Alw26I GTCTC 2 cut(s) 770, 953
AlwI GGATC 2 cut(s) 575, 865
AlwNI CAGNNNCTG 1 cut(s) 806
Ama87I CYCGRG 1 cut(s) 767
AoxI GGCC 3 cut(s) 694, 770, 933
ApeKI GCWGC 4 cut(s) 178, 680, 794, 797
ApoI RAATTY 3 cut(s) 344, 358, 846
Asp700I GAANNNNTTC 2 cut(s) 105, 1162
AspLEI GCGC 1 cut(s) 928
AspS9I GGNCC 3 cut(s) 770, 863, 933
AsuC2I CCSGG 1 cut(s) 1113
AvaI CYCGRG 1 cut(s) 767
AvaII GGWCC 1 cut(s) 863
BanI GGYRCC 2 cut(s) 889, 925
BbsI GAAGAC 1 cut(s) 1165
BbvCI CCTCAGC 1 cut(s) 911
BbvI GCAGC 4 cut(s) 165, 667, 784, 806
BccI CCATC 1 cut(s) 671
BceAI ACGGC 1 cut(s) 109
BciT130I CCWGG 3 cut(s) 200, 266, 823
BcnI CCSGG 1 cut(s) 1113
BcoDI GTCTC 2 cut(s) 770, 953
BfaI CTAG 1 cut(s) 431
BfmI CTRYAG 2 cut(s) 681, 798
BfoI RGCGCY 1 cut(s) 929
BfuAI ACCTGC 1 cut(s) 503
BglII AGATCT 1 cut(s) 566
BisI GCNGC 5 cut(s) 179, 486, 681, 795, 798
BlsI GCNGC 5 cut(s) 180, 487, 682, 796, 799
BmcAI AGTACT 1 cut(s) 500
Bme1390I CCNGG 4 cut(s) 200, 266, 823, 1113
Bme18I GGWCC 1 cut(s) 863
BmeT110I CYCGRG 1 cut(s) 767
BmgBI CACGTC 1 cut(s) 44
BmgT120I GGNCC 3 cut(s) 770, 863, 933
BmiI GGNNCC 3 cut(s) 426, 891, 927
BmrFI CCNGG 4 cut(s) 200, 266, 823, 1113
BmrI ACTGGG 1 cut(s) 931
BmsI GCATC 3 cut(s) 259, 497, 888
BmuI ACTGGG 1 cut(s) 931
BpiI GAAGAC 1 cut(s) 1165
BpmI CTGGAG 2 cut(s) 182, 977
Bpu10I CCTNAGC 2 cut(s) 469, 911
BpuEI CTTGAG 1 cut(s) 359
BpuMI CCSGG 1 cut(s) 1113
Bsa29I ATCGAT 1 cut(s) 66
BsaBI GATNNNNATC 2 cut(s) 62, 171
BsaHI GRCGYC 1 cut(s) 926
BsaJI CCNNGG 2 cut(s) 821, 929
Bsc4I CCNNNNNNNGG 2 cut(s) 205, 1111
Bse1I ACTGG 2 cut(s) 634, 926
Bse8I GATNNNNATC 2 cut(s) 62, 171
BseBI CCWGG 3 cut(s) 200, 266, 823
BseCI ATCGAT 1 cut(s) 66
BseDI CCNNGG 2 cut(s) 821, 929
BseGI GGATG 3 cut(s) 109, 274, 488
BseJI GATNNNNATC 2 cut(s) 62, 171
BseLI CCNNNNNNNGG 2 cut(s) 205, 1111
BseMII CTCAG 4 cut(s) 198, 309, 483, 902
BseNI ACTGG 2 cut(s) 634, 926
BseRI GAGGAG 3 cut(s) 291, 396, 495
BseXI GCAGC 4 cut(s) 165, 667, 784, 806
Bsh1236I CGCG 1 cut(s) 83
BshFI GGCC 3 cut(s) 696, 772, 935
BshNI GGYRCC 2 cut(s) 889, 925
BshVI ATCGAT 1 cut(s) 66
BsiHKCI CYCGRG 1 cut(s) 767
BsiSI CCGG 1 cut(s) 1112
BslI CCNNNNNNNGG 2 cut(s) 205, 1111
BsmAI GTCTC 2 cut(s) 770, 953
BsmBI CGTCTC 1 cut(s) 953
BsmI GAATGC 2 cut(s) 640, 664
BsnI GGCC 3 cut(s) 696, 772, 935
BsoBI CYCGRG 1 cut(s) 767
Bsp143I GATC 5 cut(s) 15, 566, 580, 857, 1186
BspACI CCGC 3 cut(s) 83, 485, 1048
BspANI GGCC 3 cut(s) 696, 772, 935
BspCNI CTCAG 4 cut(s) 197, 308, 482, 903
BspDI ATCGAT 1 cut(s) 66
BspFNI CGCG 1 cut(s) 83
BspLI GGNNCC 3 cut(s) 426, 891, 927
BspMAI CTGCAG 2 cut(s) 685, 802
BspMI ACCTGC 1 cut(s) 503
BspPI GGATC 2 cut(s) 575, 865
BspQI GCTCTTC 1 cut(s) 1005
BspT107I GGYRCC 2 cut(s) 889, 925
BsrBI CCGCTC 1 cut(s) 485
BsrI ACTGG 2 cut(s) 634, 926
BssECI CCNNGG 2 cut(s) 821, 929
BssMI GATC 5 cut(s) 15, 566, 580, 857, 1186
BssNI GRCGYC 1 cut(s) 926
BssT1I CCWWGG 1 cut(s) 929
Bst2UI CCWGG 3 cut(s) 200, 266, 823
Bst4CI ACNGT 4 cut(s) 32, 39, 317, 424
Bst6I CTCTTC 3 cut(s) 576, 1005, 1050
BstACI GRCGYC 1 cut(s) 926
BstAPI GCANNNNNTGC 1 cut(s) 518
BstC8I GCNNGC 1 cut(s) 554
BstDEI CTNAG 5 cut(s) 184, 295, 469, 904, 911
BstF5I GGATG 3 cut(s) 109, 274, 488
BstFNI CGCG 1 cut(s) 83
BstH2I RGCGCY 1 cut(s) 929
BstHHI GCGC 1 cut(s) 928
BstKTI GATC 5 cut(s) 18, 569, 583, 860, 1189
BstMAI GTCTC 2 cut(s) 770, 953
BstMBI GATC 5 cut(s) 15, 566, 580, 857, 1186
BstMWI GCNNNNNNNGC 5 cut(s) 518, 898, 907, 932, 995
BstNI CCWGG 3 cut(s) 200, 266, 823
BstNSI RCATGY 2 cut(s) 779, 877
BstSCI CCNGG 4 cut(s) 198, 264, 821, 1111
BstSFI CTRYAG 2 cut(s) 681, 798
BstUI CGCG 1 cut(s) 83
BstV1I GCAGC 4 cut(s) 165, 667, 784, 806
BstV2I GAAGAC 1 cut(s) 1165
BstX2I RGATCY 2 cut(s) 566, 857
BstYI RGATCY 2 cut(s) 566, 857
Bsu15I ATCGAT 1 cut(s) 66
BsuRI GGCC 3 cut(s) 696, 772, 935
BsuTUI ATCGAT 1 cut(s) 66
BtrI CACGTC 1 cut(s) 44
BtsCI GGATG 3 cut(s) 109, 274, 488
BtsI GCAGTG 1 cut(s) 807
BtsIMutI CAGTG 3 cut(s) 322, 334, 807
BveI ACCTGC 1 cut(s) 503
Cac8I GCNNGC 1 cut(s) 554
CaiI CAGNNNCTG 1 cut(s) 806
CfoI GCGC 1 cut(s) 928
Cfr13I GGNCC 3 cut(s) 770, 863, 933
ClaI ATCGAT 1 cut(s) 66
Csp6I GTAC 3 cut(s) 365, 499, 1009
CviAII CATG 4 cut(s) 677, 776, 832, 874
CviQI GTAC 3 cut(s) 365, 499, 1009
DdeI CTNAG 5 cut(s) 184, 295, 469, 904, 911
DinI GGCGCC 1 cut(s) 927
DpnI GATC 5 cut(s) 17, 568, 582, 859, 1188
DpnII GATC 5 cut(s) 15, 566, 580, 857, 1186
DraI TTTAAA 1 cut(s) 7
Eam1104I CTCTTC 3 cut(s) 576, 1005, 1050
EarI CTCTTC 3 cut(s) 576, 1005, 1050
Eco130I CCWWGG 1 cut(s) 929
Eco147I AGGCCT 1 cut(s) 696
Eco32I GATATC 2 cut(s) 325, 1089
Eco47I GGWCC 1 cut(s) 863
Eco57I CTGAAG 2 cut(s) 722, 986
Eco88I CYCGRG 1 cut(s) 767
EcoO109I RGGNCCY 1 cut(s) 933
EcoRI GAATTC 1 cut(s) 358
EcoRII CCWGG 3 cut(s) 198, 264, 821
EcoRV GATATC 2 cut(s) 325, 1089
EcoT14I CCWWGG 1 cut(s) 929
EgeI GGCGCC 1 cut(s) 927
EheI GGCGCC 1 cut(s) 927
ErhI CCWWGG 1 cut(s) 929
Esp3I CGTCTC 1 cut(s) 953
FaeI CATG 4 cut(s) 680, 779, 835, 877
FalI AAGNNNNNCTT 2 cut(s) 887, 919
FatI CATG 4 cut(s) 676, 775, 831, 873
FauI CCCGC 2 cut(s) 76, 1055
FauNDI CATATG 1 cut(s) 1020
Fnu4HI GCNGC 5 cut(s) 179, 486, 681, 795, 798
FokI GGATG 3 cut(s) 96, 281, 475
Fsp4HI GCNGC 5 cut(s) 179, 486, 681, 795, 798
FspBI CTAG 1 cut(s) 431
GlaI GCGC 1 cut(s) 927
GluI GCNGC 5 cut(s) 179, 486, 681, 795, 798
GsuI CTGGAG 2 cut(s) 182, 977
HaeII RGCGCY 1 cut(s) 929
HaeIII GGCC 3 cut(s) 696, 772, 935
HapII CCGG 1 cut(s) 1112
HhaI GCGC 1 cut(s) 928
Hin1I GRCGYC 1 cut(s) 926
Hin1II CATG 4 cut(s) 680, 779, 835, 877
Hin6I GCGC 1 cut(s) 926
HinP1I GCGC 1 cut(s) 926
HinfI GANTC 8 cut(s) 87, 136, 144, 293, 614, 965, 973, 1180
HpaII CCGG 1 cut(s) 1112
Hpy166II GTNNAC 2 cut(s) 35, 1136
Hpy188I TCNGA 6 cut(s) 373, 646, 741, 808, 1005, 1073
Hpy188III TCNNGA 5 cut(s) 431, 575, 855, 1177, 1184
Hpy8I GTNNAC 2 cut(s) 35, 1136
HpyAV CCTTC 7 cut(s) 123, 304, 378, 502, 534, 946, 979
HpyCH4III ACNGT 4 cut(s) 32, 39, 317, 424
HpyCH4IV ACGT 1 cut(s) 43
HpyCH4V TGCA 6 cut(s) 564, 683, 779, 794, 800, 1018
HpyF10VI GCNNNNNNNGC 5 cut(s) 518, 898, 907, 932, 995
HpyF3I CTNAG 5 cut(s) 184, 295, 469, 904, 911
HpySE526I ACGT 1 cut(s) 43
Hsp92I GRCGYC 1 cut(s) 926
Hsp92II CATG 4 cut(s) 680, 779, 835, 877
HspAI GCGC 1 cut(s) 926
KasI GGCGCC 1 cut(s) 925
Kzo9I GATC 5 cut(s) 15, 566, 580, 857, 1186
LguI GCTCTTC 1 cut(s) 1005
LmnI GCTCC 2 cut(s) 304, 482
Lsp1109I GCAGC 4 cut(s) 165, 667, 784, 806
LweI GCATC 3 cut(s) 259, 497, 888
MaeI CTAG 1 cut(s) 431
MaeII ACGT 1 cut(s) 43
MaeIII GTNAC 5 cut(s) 39, 403, 473, 685, 1076
MalI GATC 5 cut(s) 17, 568, 582, 859, 1188
MbiI CCGCTC 1 cut(s) 485
MboI GATC 5 cut(s) 15, 566, 580, 857, 1186
MboII GAAGA 9 cut(s) 10, 113, 364, 367, 563, 728, 992, 1067, 1170
MflI RGATCY 2 cut(s) 566, 857
MluCI AATT 6 cut(s) 203, 344, 358, 780, 846, 1140
Mly113I GGCGCC 1 cut(s) 926
MlyI GAGTC 2 cut(s) 287, 608
MmeI TCCRAC 1 cut(s) 225
MroXI GAANNNNTTC 2 cut(s) 105, 1162
MseI TTAA 4 cut(s) 6, 27, 624, 951
MspA1I CMGCKG 2 cut(s) 178, 797
MspI CCGG 1 cut(s) 1112
MspR9I CCNGG 4 cut(s) 200, 266, 823, 1113
Mva1269I GAATGC 2 cut(s) 640, 664
MvaI CCWGG 3 cut(s) 200, 266, 823
MvnI CGCG 1 cut(s) 83
MwoI GCNNNNNNNGC 5 cut(s) 518, 898, 907, 932, 995
NarI GGCGCC 1 cut(s) 926
NciI CCSGG 1 cut(s) 1113
NdeI CATATG 1 cut(s) 1020
NdeII GATC 5 cut(s) 15, 566, 580, 857, 1186
NlaIII CATG 4 cut(s) 680, 779, 835, 877
NlaIV GGNNCC 3 cut(s) 426, 891, 927
NmuCI GTSAC 3 cut(s) 39, 403, 473
NspI RCATGY 2 cut(s) 779, 877
PceI AGGCCT 1 cut(s) 696
PciSI GCTCTTC 1 cut(s) 1005
PctI GAATGC 2 cut(s) 640, 664
PdmI GAANNNNTTC 2 cut(s) 105, 1162
PfeI GAWTC 6 cut(s) 87, 136, 144, 965, 973, 1180
PflMI CCANNNNNTGG 1 cut(s) 205
PfoI TCCNGGA 2 cut(s) 198, 264
PkrI GCNGC 5 cut(s) 180, 487, 682, 796, 799
PleI GAGTC 2 cut(s) 287, 608
PluTI GGCGCC 1 cut(s) 929
PpsI GAGTC 2 cut(s) 287, 608
PsiI TTATAA 1 cut(s) 72
Psp6I CCWGG 3 cut(s) 198, 264, 821
PspGI CCWGG 3 cut(s) 198, 264, 821
PspN4I GGNNCC 3 cut(s) 426, 891, 927
PspPI GGNCC 3 cut(s) 770, 863, 933
PstI CTGCAG 2 cut(s) 685, 802
PstNI CAGNNNCTG 1 cut(s) 806
PsuI RGATCY 2 cut(s) 566, 857
PvuII CAGCTG 2 cut(s) 178, 797
RsaI GTAC 3 cut(s) 366, 500, 1010
RsaNI GTAC 3 cut(s) 365, 499, 1009
SapI GCTCTTC 1 cut(s) 1005
SaqAI TTAA 4 cut(s) 6, 27, 624, 951
SatI GCNGC 5 cut(s) 179, 486, 681, 795, 798
Sau3AI GATC 5 cut(s) 15, 566, 580, 857, 1186
Sau96I GGNCC 3 cut(s) 770, 863, 933
ScaI AGTACT 1 cut(s) 500
SchI GAGTC 2 cut(s) 287, 608
ScrFI CCNGG 4 cut(s) 200, 266, 823, 1113
SfaNI GCATC 3 cut(s) 259, 497, 888
SfcI CTRYAG 2 cut(s) 681, 798
SfoI GGCGCC 1 cut(s) 927
SinI GGWCC 1 cut(s) 863
SmlI CTYRAG 1 cut(s) 338
SmoI CTYRAG 1 cut(s) 338
Sse9I AATT 6 cut(s) 203, 344, 358, 780, 846, 1140
SseBI AGGCCT 1 cut(s) 696
SsiI CCGC 3 cut(s) 83, 485, 1048
SspDI GGCGCC 1 cut(s) 925
SspI AATATT 3 cut(s) 11, 76, 622
SspMI CTAG 1 cut(s) 431
StuI AGGCCT 1 cut(s) 696
StyD4I CCNGG 4 cut(s) 198, 264, 821, 1111
StyI CCWWGG 1 cut(s) 929
TaaI ACNGT 4 cut(s) 32, 39, 317, 424
TaiI ACGT 1 cut(s) 46
TaqI TCGA 6 cut(s) 66, 147, 165, 538, 729, 1176
TasI AATT 6 cut(s) 203, 344, 358, 780, 846, 1140
TatI WGTACW 2 cut(s) 498, 1008
TauI GCSGC 1 cut(s) 488
TfiI GAWTC 6 cut(s) 87, 136, 144, 965, 973, 1180
Tru1I TTAA 4 cut(s) 6, 27, 624, 951
Tru9I TTAA 4 cut(s) 6, 27, 624, 951
TscAI CASTG 3 cut(s) 322, 334, 807
TseFI GTSAC 3 cut(s) 39, 403, 473
TseI GCWGC 4 cut(s) 178, 680, 794, 797
Tsp45I GTSAC 3 cut(s) 39, 403, 473
TspDTI ATGAA 5 cut(s) 10, 52, 98, 161, 1050
TspGWI ACGGA 2 cut(s) 42, 977
TspRI CASTG 3 cut(s) 322, 334, 807
Van91I CCANNNNNTGG 1 cut(s) 205
VpaK11BI GGWCC 1 cut(s) 863
XapI RAATTY 3 cut(s) 344, 358, 846
XbaI TCTAGA 1 cut(s) 430
XceI RCATGY 2 cut(s) 779, 877
XmnI GAANNNNTTC 2 cut(s) 105, 1162
XspI CTAG 1 cut(s) 431
ZrmI AGTACT 1 cut(s) 500
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.