pycom08g17670

Rhamnogalacturonate lyase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
17846065 .. 17851785
5721 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1938 bp
ATGTCATCTCAGAGCGTGCAACTGATTATTCAGGACCGTTATGTGGTCATGGATAATGGCATACTCCAAGTTACGTTATCAAAACCAGATGGAATTGTTACCAAAATACAATACAATGGCATTGACAATTTGCTCGAAGTTCTTGATGAAGAAGTAAATAGAGGGTATTGGGACCTTGTTTGGAGTGAAGCAGGAAGTGTGGGCACAACCGGGACATTTGATGTGATTAAAGGGACAAAATTCAAGGTTCGAGTGGAAAACGAGGACCAAGTAGAGATCTCCTTCACAAGAAAGTGGAATCCGTCTCAAAAGGGAGAACTTGTCCCTCTCAAAATAGATAAAAGATTTATAATGCTTCGTAATTCTTCAGGCTTCTACTCATATGCCATCTATGAGCACTTGAAAGAATGGCCTCCTTTCAACCTTCCACAGACCAGGATTGTCTTCAGGCTCAGAAAAGAAAAGTTTCACTATATGGCCATAGCAGATAACAGGCAAAGATACATGCCCCTCCCTGACGATCGATCTCCTGAGAGAAGTCAAGCCCTAGCTTACCCTGAAGCAGTCCTTCTTGTCGATCCTGTAGAGCCAGAATTCAAGGGAGAGGTGGATGATAAGTACGAATACTCATGCGAGAACCAAAACCTGCATGTTCATGGTTGGGTATGTATGGACCCACCTGTTGGCTTTTGGCAAATAACACCCAGTGATGAATTTCGATCCGGTGGACCTCTCAAACAAAATCTCACCTCCCATGTTGGCCCCTTTTGCCTTGCGATGTTTCTTAGCGCTCATTATTCAGGAGAGGACCTAGTACTGAAGCTGAAACCAGATGAGCCGTGGAAGAAAGTTTTTGGCCCCGTATTCATTTATCTTAATTCTGCGTCCGATGCAACTGATCCATCACCACTTTGGGATGATGCAAAAAAACAGATGATGACAGAAGTGCAAAGCTGGCCTTACAAGTTTCCTGCTTCCAAGGATTATCCGCCACCGGATCAACGGGGTAATGTTAAGGGTCGAATACAGATTCTGGATAGGTATGTTAGTAAAGATCGCATACCTGGAAACGGTGCGTATGTAGGCTTGGCACCACCAGGAGACGCTGGATCATGGCAAAGAGATTGTAAGGGCTACCAGTTCTGGACTAGGGCAGATGAGAAAGGATATTACTCTATTCAGAATATACGTGAGGGTGACTATAATCTCTATGCATGGTGTCCTGGTTTCATTGGAGATTATCGATATGACGCAACTATTAGCATAACCGCAGGTGGTGATATTGATGTGGATGATATTGTATATGAACCTCCAAGAGATGGACCAACGCTGTGGGAAATTGGCATCCCTGATCGATCTGCTGCTGAATTCTATATTCCTGATCCTAATCCAATGTATATCAATAAACTTTATGTCAACCATCCTGATAGGTTCAGGCAGTACGGATTATGGGAAAGATATCAAGAGTTATATCCTGATGAAGATTTAATTTACAGCATCGGCACCAGTGACTATACTAAAGATTGGTTCTTCGCCCAGGTTCCTAGGAAGAAAGATGATGACACATATCAAGGCACTACATGGCAAATCAAGTTTCAACTTAAGCATTTCAGTGAAAGTGATACCCTCAAACTTCGAATAGCCCTTGCTACTGCAAACATTGCAGAATTACAGATTCAAATAAATGATTCGAAAGCCGACCCTCCGCTGTTTACGACCGGAGTGATTGGAAAGGACAATACAATTGCTAGGCATGGAATCCATGGTCTGTACTGGCTGTATAACATAGATATACCAGGCACATTGCTGGTGGAAGGAGCCAATACCCTATTTCTAACGCAAACAATGAGCACTAGCCCTTTGGCTCCTTTCCATGGACTCATGTATGACTATATTCGTTTAGAAGGTCCATCATCTTCTTCTTCCAGTACCACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

646

Amino Acids

73.89

Weight (kDa)

5.07

Isoelectric Point (pI)

34.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rhamnogal_lyase PF06045 3 - 203 7e-97 Rhamnogalacturonate lyase family
fn3_3 PF14686 357 - 429 2.8e-26 Polysaccharide lyase family 4, domain II
CBM-like PF14683 443 - 634 8.6e-51 Polysaccharide lyase family 4, domain III
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 350
AarI CACCTGC 1 cut(s) 1262
Acc36I ACCTGC 2 cut(s) 654, 1262
AccB1I GGYRCC 2 cut(s) 1090, 1502
AccB7I CCANNNNNTGG 2 cut(s) 683, 1319
AciI CCGC 3 cut(s) 989, 1269, 1706
AclWI GGATC 6 cut(s) 572, 714, 893, 1005, 1117, 1376
AcoI YGGCCR 1 cut(s) 477
AcsI RAATTY 4 cut(s) 239, 593, 713, 1367
AcuI CTGAAG 4 cut(s) 351, 430, 579, 839
AdeI CACNNNGTG 1 cut(s) 707
AfaI GTAC 5 cut(s) 620, 816, 1442, 1772, 1930
AfeI AGCGCT 1 cut(s) 790
AfiI CCNNNNNNNGG 5 cut(s) 43, 683, 1070, 1319, 1874
AflII CTTAAG 1 cut(s) 1601
AgsI TTSAA 6 cut(s) 244, 403, 421, 598, 1598, 1679
AjnI CCWGG 6 cut(s) 434, 1063, 1096, 1222, 1536, 1795
AluBI AGCT 3 cut(s) 551, 823, 954
AluI AGCT 3 cut(s) 551, 823, 954
Alw21I GWGCWC 2 cut(s) 399, 1853
Alw26I GTCTC 2 cut(s) 309, 1095
AlwI GGATC 6 cut(s) 572, 714, 893, 1005, 1117, 1376
AlwNI CAGNNNCTG 1 cut(s) 1033
Aor51HI AGCGCT 1 cut(s) 790
AoxI GGCC 5 cut(s) 410, 477, 760, 856, 956
ApeKI GCWGC 1 cut(s) 1361
ApoI RAATTY 4 cut(s) 239, 593, 713, 1367
Asp700I GAANNNNTTC 1 cut(s) 465
AspA2I CCTAGG 1 cut(s) 1544
AspLEI GCGC 1 cut(s) 791
AsuC2I CCSGG 1 cut(s) 211
AsuHPI GGTGA 4 cut(s) 739, 897, 1208, 1289
AsuII TTCGAA 2 cut(s) 1636, 1691
AvaII GGWCC 8 cut(s) 34, 172, 265, 673, 728, 808, 1322, 1907
AvrII CCTAGG 1 cut(s) 1544
BaeGI GKGCMC 1 cut(s) 206
BalI TGGCCA 1 cut(s) 479
BanI GGYRCC 2 cut(s) 1090, 1502
BbsI GAAGAC 1 cut(s) 436
Bbv12I GWGCWC 2 cut(s) 399, 1853
BbvI GCAGC 1 cut(s) 1348
BccI CCATC 6 cut(s) 83, 395, 910, 1313, 1428, 1918
BceAI ACGGC 1 cut(s) 823
BciT130I CCWGG 6 cut(s) 436, 1065, 1098, 1224, 1538, 1797
BcnI CCSGG 1 cut(s) 211
BcoDI GTCTC 2 cut(s) 309, 1095
BfaI CTAG 6 cut(s) 548, 812, 1149, 1545, 1749, 1854
BfmI CTRYAG 1 cut(s) 582
BfoI RGCGCY 1 cut(s) 792
BfrI CTTAAG 1 cut(s) 1601
BfuAI ACCTGC 2 cut(s) 654, 1262
BglII AGATCT 1 cut(s) 276
BisI GCNGC 1 cut(s) 1362
BlnI CCTAGG 1 cut(s) 1544
BlsI GCNGC 1 cut(s) 1363
BmcAI AGTACT 1 cut(s) 816
Bme1390I CCNGG 7 cut(s) 211, 436, 1065, 1098, 1224, 1538, 1797
Bme18I GGWCC 8 cut(s) 34, 172, 265, 673, 728, 808, 1322, 1907
BmiI GGNNCC 9 cut(s) 173, 675, 763, 859, 1092, 1504, 1542, 1819, 1866
BmrFI CCNGG 7 cut(s) 211, 436, 1065, 1098, 1224, 1538, 1797
BmrI ACTGGG 1 cut(s) 699
BmsI GCATC 4 cut(s) 880, 910, 1353, 1506
BmuI ACTGGG 1 cut(s) 699
BpiI GAAGAC 1 cut(s) 436
Bpu14I TTCGAA 2 cut(s) 1636, 1691
BpuMI CCSGG 1 cut(s) 211
Bsa29I ATCGAT 3 cut(s) 523, 1243, 1354
BsaAI YACGTR 1 cut(s) 1190
BsaBI GATNNNNATC 1 cut(s) 1386
BsaJI CCNNGG 6 cut(s) 839, 978, 1536, 1544, 1762, 1873
BsaWI WCCGGW 3 cut(s) 722, 994, 1718
BsaXI ACNNNNNCTCC 2 cut(s) 306, 336
Bsc4I CCNNNNNNNGG 5 cut(s) 43, 683, 1070, 1319, 1874
Bse1I ACTGG 5 cut(s) 705, 1138, 1506, 1778, 1926
Bse3DI GCAATG 2 cut(s) 1659, 1802
Bse8I GATNNNNATC 1 cut(s) 1386
BseBI CCWGG 6 cut(s) 436, 1065, 1098, 1224, 1538, 1797
BseCI ATCGAT 3 cut(s) 523, 1243, 1354
BseDI CCNNGG 6 cut(s) 839, 978, 1536, 1544, 1762, 1873
BseGI GGATG 5 cut(s) 616, 922, 1297, 1344, 1420
BseJI GATNNNNATC 1 cut(s) 1386
BseLI CCNNNNNNNGG 5 cut(s) 43, 683, 1070, 1319, 1874
BseMI GCAATG 2 cut(s) 1659, 1802
BseMII CTCAG 3 cut(s) 23, 466, 522
BseNI ACTGG 5 cut(s) 705, 1138, 1506, 1778, 1926
BseSI GKGCMC 1 cut(s) 206
BseXI GCAGC 1 cut(s) 1348
Bsh1285I CGRYCG 2 cut(s) 523, 1719
BshFI GGCC 5 cut(s) 412, 479, 762, 858, 958
BshNI GGYRCC 2 cut(s) 1090, 1502
BshVI ATCGAT 3 cut(s) 523, 1243, 1354
BsiEI CGRYCG 2 cut(s) 523, 1719
BsiHKAI GWGCWC 2 cut(s) 399, 1853
BsiSI CCGG 4 cut(s) 210, 723, 995, 1719
BslFI GGGAC 4 cut(s) 185, 226, 247, 308
BslI CCNNNNNNNGG 5 cut(s) 43, 683, 1070, 1319, 1874
BsmAI GTCTC 2 cut(s) 309, 1095
BsmBI CGTCTC 2 cut(s) 309, 1095
BsmFI GGGAC 4 cut(s) 185, 226, 247, 308
BsnI GGCC 5 cut(s) 412, 479, 762, 858, 958
Bsp119I TTCGAA 2 cut(s) 1636, 1691
Bsp1286I GDGCHC 3 cut(s) 206, 399, 1853
Bsp19I CCATGG 2 cut(s) 1762, 1873
BspACI CCGC 3 cut(s) 989, 1269, 1706
BspANI GGCC 5 cut(s) 412, 479, 762, 858, 958
BspCNI CTCAG 3 cut(s) 22, 465, 523
BspDI ATCGAT 3 cut(s) 523, 1243, 1354
BspLI GGNNCC 9 cut(s) 173, 675, 763, 859, 1092, 1504, 1542, 1819, 1866
BspMI ACCTGC 2 cut(s) 654, 1262
BspPI GGATC 6 cut(s) 572, 714, 893, 1005, 1117, 1376
BspT104I TTCGAA 2 cut(s) 1636, 1691
BspT107I GGYRCC 2 cut(s) 1090, 1502
BspTI CTTAAG 1 cut(s) 1601
BsrDI GCAATG 2 cut(s) 1659, 1802
BsrI ACTGG 5 cut(s) 705, 1138, 1506, 1778, 1926
BssECI CCNNGG 6 cut(s) 839, 978, 1536, 1544, 1762, 1873
BssT1I CCWWGG 4 cut(s) 978, 1544, 1762, 1873
Bst2UI CCWGG 6 cut(s) 436, 1065, 1098, 1224, 1538, 1797
Bst4CI ACNGT 2 cut(s) 38, 1073
BstAFI CTTAAG 1 cut(s) 1601
BstAPI GCANNNNNTGC 1 cut(s) 1661
BstBAI YACGTR 1 cut(s) 1190
BstBI TTCGAA 2 cut(s) 1636, 1691
BstC8I GCNNGC 2 cut(s) 17, 956
BstDEI CTNAG 4 cut(s) 9, 452, 531, 785
BstDSI CCRYGG 3 cut(s) 839, 1762, 1873
BstF5I GGATG 5 cut(s) 616, 922, 1297, 1344, 1420
BstH2I RGCGCY 1 cut(s) 792
BstHHI GCGC 1 cut(s) 791
BstMAI GTCTC 2 cut(s) 309, 1095
BstMCI CGRYCG 2 cut(s) 523, 1719
BstMWI GCNNNNNNNGC 4 cut(s) 768, 890, 955, 1661
BstNI CCWGG 6 cut(s) 436, 1065, 1098, 1224, 1538, 1797
BstNSI RCATGY 2 cut(s) 508, 653
BstSCI CCNGG 7 cut(s) 209, 434, 1063, 1096, 1222, 1536, 1795
BstSFI CTRYAG 1 cut(s) 582
BstSLI GKGCMC 1 cut(s) 206
BstV1I GCAGC 1 cut(s) 1348
BstV2I GAAGAC 1 cut(s) 436
BstX2I RGATCY 1 cut(s) 276
BstXI CCANNNNNNTGG 1 cut(s) 1332
BstYI RGATCY 1 cut(s) 276
Bsu15I ATCGAT 3 cut(s) 523, 1243, 1354
BsuRI GGCC 5 cut(s) 412, 479, 762, 858, 958
BsuTUI ATCGAT 3 cut(s) 523, 1243, 1354
BtgI CCRYGG 3 cut(s) 839, 1762, 1873
BtgZI GCGATG 1 cut(s) 791
BtsCI GGATG 5 cut(s) 616, 922, 1297, 1344, 1420
BtsIMutI CAGTG 3 cut(s) 712, 1513, 1618
BveI ACCTGC 2 cut(s) 654, 1262
Cac8I GCNNGC 2 cut(s) 17, 956
CaiI CAGNNNCTG 1 cut(s) 1033
CfoI GCGC 1 cut(s) 791
ClaI ATCGAT 3 cut(s) 523, 1243, 1354
CseI GACGC 3 cut(s) 873, 1112, 1259
Csp6I GTAC 5 cut(s) 619, 815, 1441, 1771, 1929
CviQI GTAC 5 cut(s) 619, 815, 1441, 1771, 1929
DdeI CTNAG 4 cut(s) 9, 452, 531, 785
DraIII CACNNNGTG 1 cut(s) 707
EaeI YGGCCR 1 cut(s) 477
EciI GGCGGA 1 cut(s) 978
Eco130I CCWWGG 4 cut(s) 978, 1544, 1762, 1873
Eco32I GATATC 1 cut(s) 1460
Eco47I GGWCC 8 cut(s) 34, 172, 265, 673, 728, 808, 1322, 1907
Eco47III AGCGCT 1 cut(s) 790
Eco57I CTGAAG 4 cut(s) 351, 430, 579, 839
EcoO109I RGGNCCY 2 cut(s) 172, 808
EcoRI GAATTC 2 cut(s) 593, 1367
EcoRII CCWGG 6 cut(s) 434, 1063, 1096, 1222, 1536, 1795
EcoRV GATATC 1 cut(s) 1460
EcoT14I CCWWGG 4 cut(s) 978, 1544, 1762, 1873
EcoT22I ATGCAT 1 cut(s) 1216
ErhI CCWWGG 4 cut(s) 978, 1544, 1762, 1873
Esp3I CGTCTC 2 cut(s) 309, 1095
FalI AAGNNNNNCTT 4 cut(s) 552, 584, 943, 975
FaqI GGGAC 4 cut(s) 185, 226, 247, 308
FauNDI CATATG 1 cut(s) 382
Fnu4HI GCNGC 1 cut(s) 1362
FokI GGATG 5 cut(s) 623, 929, 1304, 1331, 1407
Fsp4HI GCNGC 1 cut(s) 1362
FspBI CTAG 6 cut(s) 548, 812, 1149, 1545, 1749, 1854
GlaI GCGC 1 cut(s) 790
GluI GCNGC 1 cut(s) 1362
HaeII RGCGCY 1 cut(s) 792
HaeIII GGCC 5 cut(s) 412, 479, 762, 858, 958
HapII CCGG 4 cut(s) 210, 723, 995, 1719
HgaI GACGC 3 cut(s) 873, 1112, 1259
HhaI GCGC 1 cut(s) 791
Hin6I GCGC 1 cut(s) 789
HinP1I GCGC 1 cut(s) 789
HincII GTYRAC 1 cut(s) 1417
HindII GTYRAC 1 cut(s) 1417
HinfI GANTC 6 cut(s) 298, 1030, 1675, 1688, 1758, 1878
HpaII CCGG 4 cut(s) 210, 723, 995, 1719
HphI GGTGA 4 cut(s) 739, 897, 1208, 1289
Hpy166II GTNNAC 3 cut(s) 728, 1417, 1713
Hpy188I TCNGA 4 cut(s) 12, 455, 889, 1182
Hpy8I GTNNAC 3 cut(s) 728, 1417, 1713
HpyAV CCTTC 5 cut(s) 292, 434, 578, 1808, 1898
HpyCH4III ACNGT 2 cut(s) 38, 1073
HpyCH4IV ACGT 2 cut(s) 74, 1189
HpyCH4V TGCA 8 cut(s) 19, 649, 893, 923, 949, 1214, 1655, 1664
HpyF10VI GCNNNNNNNGC 4 cut(s) 768, 890, 955, 1661
HpyF3I CTNAG 4 cut(s) 9, 452, 531, 785
HpySE526I ACGT 2 cut(s) 74, 1189
HspAI GCGC 1 cut(s) 789
LmnI GCTCC 2 cut(s) 1817, 1870
Lsp1109I GCAGC 1 cut(s) 1348
LweI GCATC 4 cut(s) 880, 910, 1353, 1506
MaeI CTAG 6 cut(s) 548, 812, 1149, 1545, 1749, 1854
MaeII ACGT 2 cut(s) 74, 1189
MaeIII GTNAC 4 cut(s) 70, 97, 1196, 1508
MfeI CAATTG 1 cut(s) 1743
MflI RGATCY 1 cut(s) 276
MhlI GDGCHC 3 cut(s) 206, 399, 1853
MlsI TGGCCA 1 cut(s) 479
MluNI TGGCCA 1 cut(s) 479
MlyI GAGTC 1 cut(s) 1872
Mox20I TGGCCA 1 cut(s) 479
Mph1103I ATGCAT 1 cut(s) 1216
MroXI GAANNNNTTC 1 cut(s) 465
MscI TGGCCA 1 cut(s) 479
MseI TTAA 5 cut(s) 228, 876, 1014, 1487, 1602
MslI CAYNNNNRTG 2 cut(s) 654, 1611
Msp20I TGGCCA 1 cut(s) 479
MspA1I CMGCKG 1 cut(s) 1708
MspCI CTTAAG 1 cut(s) 1601
MspI CCGG 4 cut(s) 210, 723, 995, 1719
MspR9I CCNGG 7 cut(s) 211, 436, 1065, 1098, 1224, 1538, 1797
MunI CAATTG 1 cut(s) 1743
MvaI CCWGG 6 cut(s) 436, 1065, 1098, 1224, 1538, 1797
MwoI GCNNNNNNNGC 4 cut(s) 768, 890, 955, 1661
NciI CCSGG 1 cut(s) 211
NcoI CCATGG 2 cut(s) 1762, 1873
NdeI CATATG 1 cut(s) 382
NlaIV GGNNCC 9 cut(s) 173, 675, 763, 859, 1092, 1504, 1542, 1819, 1866
NmuCI GTSAC 2 cut(s) 1196, 1508
NsiI ATGCAT 1 cut(s) 1216
NspI RCATGY 2 cut(s) 508, 653
NspV TTCGAA 2 cut(s) 1636, 1691
PaqCI CACCTGC 1 cut(s) 1262
PdmI GAANNNNTTC 1 cut(s) 465
PfeI GAWTC 5 cut(s) 298, 1030, 1675, 1688, 1758
PflMI CCANNNNNTGG 2 cut(s) 683, 1319
PkrI GCNGC 1 cut(s) 1363
Ple19I CGATCG 1 cut(s) 523
PleI GAGTC 1 cut(s) 1872
PpsI GAGTC 1 cut(s) 1872
Ppu21I YACGTR 1 cut(s) 1190
PpuMI RGGWCCY 2 cut(s) 172, 808
PsiI TTATAA 1 cut(s) 350
Psp5II RGGWCCY 2 cut(s) 172, 808
Psp6I CCWGG 6 cut(s) 434, 1063, 1096, 1222, 1536, 1795
PspGI CCWGG 6 cut(s) 434, 1063, 1096, 1222, 1536, 1795
PspN4I GGNNCC 9 cut(s) 173, 675, 763, 859, 1092, 1504, 1542, 1819, 1866
PspPPI RGGWCCY 2 cut(s) 172, 808
PstNI CAGNNNCTG 1 cut(s) 1033
PsuI RGATCY 1 cut(s) 276
PvuI CGATCG 1 cut(s) 523
RsaI GTAC 5 cut(s) 620, 816, 1442, 1772, 1930
RsaNI GTAC 5 cut(s) 619, 815, 1441, 1771, 1929
RseI CAYNNNNRTG 2 cut(s) 654, 1611
SaqAI TTAA 5 cut(s) 228, 876, 1014, 1487, 1602
SatI GCNGC 1 cut(s) 1362
ScaI AGTACT 1 cut(s) 816
SchI GAGTC 1 cut(s) 1872
ScrFI CCNGG 7 cut(s) 211, 436, 1065, 1098, 1224, 1538, 1797
SduI GDGCHC 3 cut(s) 206, 399, 1853
SfaNI GCATC 4 cut(s) 880, 910, 1353, 1506
SfcI CTRYAG 1 cut(s) 582
SfuI TTCGAA 2 cut(s) 1636, 1691
SinI GGWCC 8 cut(s) 34, 172, 265, 673, 728, 808, 1322, 1907
SmiMI CAYNNNNRTG 2 cut(s) 654, 1611
SmlI CTYRAG 1 cut(s) 1601
SmoI CTYRAG 1 cut(s) 1601
SsiI CCGC 3 cut(s) 989, 1269, 1706
SspMI CTAG 6 cut(s) 548, 812, 1149, 1545, 1749, 1854
StyD4I CCNGG 7 cut(s) 209, 434, 1063, 1096, 1222, 1536, 1795
StyI CCWWGG 4 cut(s) 978, 1544, 1762, 1873
TaaI ACNGT 2 cut(s) 38, 1073
TaiI ACGT 2 cut(s) 77, 1192
TatI WGTACW 2 cut(s) 814, 1770
TfiI GAWTC 5 cut(s) 298, 1030, 1675, 1688, 1758
Tru1I TTAA 5 cut(s) 228, 876, 1014, 1487, 1602
Tru9I TTAA 5 cut(s) 228, 876, 1014, 1487, 1602
TscAI CASTG 3 cut(s) 712, 1513, 1618
TseFI GTSAC 2 cut(s) 1196, 1508
TseI GCWGC 1 cut(s) 1361
Tsp45I GTSAC 2 cut(s) 1196, 1508
TspDTI ATGAA 7 cut(s) 162, 644, 726, 856, 1219, 1320, 1494
TspGWI ACGGA 2 cut(s) 291, 1458
TspRI CASTG 3 cut(s) 712, 1513, 1618
Van91I CCANNNNNTGG 2 cut(s) 683, 1319
Vha464I CTTAAG 1 cut(s) 1601
VpaK11BI GGWCC 8 cut(s) 34, 172, 265, 673, 728, 808, 1322, 1907
XapI RAATTY 4 cut(s) 239, 593, 713, 1367
XceI RCATGY 2 cut(s) 508, 653
XcmI CCANNNNNNNNNTGG 2 cut(s) 837, 909
XmaJI CCTAGG 1 cut(s) 1544
XmnI GAANNNNTTC 1 cut(s) 465
XspI CTAG 6 cut(s) 548, 812, 1149, 1545, 1749, 1854
ZrmI AGTACT 1 cut(s) 816
Zsp2I ATGCAT 1 cut(s) 1216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.