pycom09g15010

Histone-lysine n-methyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
14900042 .. 14900705
664 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g15010.1

Sequence Viewer

Length: 477 bp
ATGGCTTTCAGCTGCTGCTGCTCAATCTTCTCCTCTAATATTATAGTTCTTGCCAAAACTCCTATATTAGAATCTACTTACATCATAATTGTTAAGGCCATTCCCAATTTCCCATATACGTTCCAATACTTTAGATATTTATATTTTTTTTCTTTTTCTGGTGAGAAAGGTGAACTCTTGACAACAAAAGAAGCAAGACTGCGACAACAAGTATATGATGAGTTTGCTTCAGGTGGTAATTTTTCTCCTGCTCTTTTGGTTGTGAGGGAGCATCTTCCATCCAGAAAGGCGTGTTTAAGATACAATATCGTTTCAGGTGCTTTGCTCCCACGCCTTTGCTTTTTTTCTTCAAAAGTCATACAAGAAGACGACGATCTTACTTTTAGCTATGGAGAAGTTACGCTAAGGTCTAAGGGTTTAAAGTGCTTTTGCGGAAGCTCTTGTTGTCTTGGAATGTTGCCATCAGAGCAGACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

159

Amino Acids

17.81

Weight (kDa)

8.36

Isoelectric Point (pI)

48.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 432
AcuI CTGAAG 1 cut(s) 213
AgsI TTSAA 1 cut(s) 351
AluBI AGCT 3 cut(s) 12, 387, 438
AluI AGCT 3 cut(s) 12, 387, 438
AlwNI CAGNNNCTG 1 cut(s) 15
AoxI GGCC 1 cut(s) 96
ApeKI GCWGC 3 cut(s) 12, 15, 18
AsuHPI GGTGA 2 cut(s) 173, 182
BbsI GAAGAC 1 cut(s) 372
BbvI GCAGC 2 cut(s) 2, 5
BccI CCATC 2 cut(s) 286, 469
BisI GCNGC 3 cut(s) 13, 16, 19
BlsI GCNGC 3 cut(s) 14, 17, 20
BmsI GCATC 1 cut(s) 280
BpiI GAAGAC 1 cut(s) 372
Bpu10I CCTNAGC 1 cut(s) 404
BseGI GGATG 1 cut(s) 278
BseRI GAGGAG 1 cut(s) 22
BseXI GCAGC 2 cut(s) 2, 5
BshFI GGCC 1 cut(s) 98
BsnI GGCC 1 cut(s) 98
Bsp143I GATC 1 cut(s) 373
BspACI CCGC 1 cut(s) 432
BspANI GGCC 1 cut(s) 98
BssMI GATC 1 cut(s) 373
BstDEI CTNAG 3 cut(s) 404, 411, 474
BstF5I GGATG 1 cut(s) 278
BstKTI GATC 1 cut(s) 376
BstMBI GATC 1 cut(s) 373
BstMWI GCNNNNNNNGC 2 cut(s) 18, 466
BstV1I GCAGC 2 cut(s) 2, 5
BstV2I GAAGAC 1 cut(s) 372
BsuRI GGCC 1 cut(s) 98
BtsCI GGATG 1 cut(s) 278
CaiI CAGNNNCTG 1 cut(s) 15
CviJI RGCY 5 cut(s) 5, 12, 98, 387, 438
CviKI_1 RGCY 5 cut(s) 5, 12, 98, 387, 438
DdeI CTNAG 3 cut(s) 404, 411, 474
DpnI GATC 1 cut(s) 375
DpnII GATC 1 cut(s) 373
DraI TTTAAA 1 cut(s) 420
Eco57I CTGAAG 1 cut(s) 213
Fnu4HI GCNGC 3 cut(s) 13, 16, 19
FokI GGATG 1 cut(s) 265
Fsp4HI GCNGC 3 cut(s) 13, 16, 19
GluI GCNGC 3 cut(s) 13, 16, 19
HaeIII GGCC 1 cut(s) 98
HinfI GANTC 1 cut(s) 71
HphI GGTGA 2 cut(s) 173, 182
Hpy166II GTNNAC 1 cut(s) 173
Hpy188I TCNGA 1 cut(s) 466
Hpy188III TCNNGA 2 cut(s) 178, 282
Hpy8I GTNNAC 1 cut(s) 173
Hpy99I CGWCG 1 cut(s) 374
HpyCH4IV ACGT 1 cut(s) 119
HpyF10VI GCNNNNNNNGC 2 cut(s) 18, 466
HpyF3I CTNAG 3 cut(s) 404, 411, 474
HpySE526I ACGT 1 cut(s) 119
Kzo9I GATC 1 cut(s) 373
LmnI GCTCC 2 cut(s) 268, 330
LpnPI CCDG 5 cut(s) 144, 216, 261, 295, 300
Lsp1109I GCAGC 2 cut(s) 2, 5
LweI GCATC 1 cut(s) 280
MaeII ACGT 1 cut(s) 119
MaeIII GTNAC 1 cut(s) 397
MalI GATC 1 cut(s) 375
MboI GATC 1 cut(s) 373
MboII GAAGA 4 cut(s) 19, 266, 339, 377
MluCI AATT 3 cut(s) 87, 106, 238
MnlI CCTC 2 cut(s) 43, 258
MseI TTAA 3 cut(s) 93, 296, 419
MspA1I CMGCKG 1 cut(s) 12
MwoI GCNNNNNNNGC 2 cut(s) 18, 466
NdeII GATC 1 cut(s) 373
PfeI GAWTC 1 cut(s) 71
PkrI GCNGC 3 cut(s) 14, 17, 20
PstNI CAGNNNCTG 1 cut(s) 15
PvuII CAGCTG 1 cut(s) 12
SaqAI TTAA 3 cut(s) 93, 296, 419
SatI GCNGC 3 cut(s) 13, 16, 19
Sau3AI GATC 1 cut(s) 373
SetI ASST 8 cut(s) 14, 122, 172, 235, 319, 389, 410, 440
SfaNI GCATC 1 cut(s) 280
Sse9I AATT 3 cut(s) 87, 106, 238
SsiI CCGC 1 cut(s) 432
SspI AATATT 1 cut(s) 40
TaiI ACGT 1 cut(s) 122
TasI AATT 3 cut(s) 87, 106, 238
TfiI GAWTC 1 cut(s) 71
Tru1I TTAA 3 cut(s) 93, 296, 419
Tru9I TTAA 3 cut(s) 93, 296, 419
TseI GCWGC 3 cut(s) 12, 15, 18
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.