RLG00000034432

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0008003
Physical Location & Seq
Reverse (-)
42638566 .. 42640250
1685 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034432

Sequence Viewer

Length: 1038 bp
ATGAACAAGAAGATGCAGTCGCCACCAACAACACCATCGAAACGCAATACCAGTCCTTCCCTTTTCTTCCGGTGCTTAGACCTCGTCCTTCCATGGCTAACCCCACAAGAGCTAGCCATGGCATCTCTGACCTGCACCACCCTCCGCAACCTCTCCAAGTCCATCACTCTCCGCCGCGCCTCCGACGCTTCCAGATCCCTCGAGCCACATCCCATCCCATTCCATAACTCACTCGATCAACACCCTTATGCCTACTTCATCTACACCCCATCATCTTCTTCTTCTTCTTCTGCACTGCTTCGCCAACCGTGGGGTTCCAGTCACCACGAGTCAGACTCGGACACCAGAACTGAAACGTCGTCGTTGCGTTTTGTTGACGAATCGGGAAACTGTGCGTCGTCTGGGTGTGAATGTGAAGAGACATGTGAGGATGGGAAAGAGGGATGTCCGTGTGTCGTTGGCTTTGCTGGCTTCGACGGCGTCGTTTTCGAGTGTGGACCCAGTTGTGGATGCCGGTTAAGTTGTGGGAATCGGTTGACTCAGACCGGGATTCAGGTTAAGTTGAAGATTGTGAGGGACATAAGAAAAGGGTGGGGTTTGTATGCCGTCCAGTTCATCCCAAAGGGTCGGTTTGTGTGCGAGTATGCAGGTGAACTATTGACAACAAAGGAATCAAGACTGCGGCAAGAAATGTATGATGAACTTTCGTCGGGTGGTCATTTCTCCCCTGCTCTTTTGGTTGTGAGGGAGCATCTTCCATCCAAAAAGGCATGTCTGAGACTCAATATTGACGCCACAAGAGTCGGAAATGTCTCAAGGTTCATCAACCATTCTTGCGACGGAGGTAATTTGTCCACAGCTCTTGTTAGAAGCTCAGGGGCTTTGCTTCCACGTCTTTGCTTTTTTGCTTCAGATGACATAAAAGTGGATGAAGAGCTTACATTTAGCTATGGTGAAACTAGGCTAAACTCCAAGGGTTTGCGGTGTTTTTGTGCAAGCTCTAGCTGTGTTGGTATATTACCCTCGGAGCGGACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00310 map00310
Pfam Domains
Protein Families
Pre-SET SET

Protein Analysis

346

Amino Acids

37.9

Weight (kDa)

8.05

Isoelectric Point (pI)

60.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SET PF00856 197 - 318 1.7e-20 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 638
Acc36I ACCTGC 2 cut(s) 140, 638
AccBSI CCGCTC 1 cut(s) 1030
AccII CGCG 1 cut(s) 177
AciI CCGC 6 cut(s) 145, 172, 175, 682, 982, 1030
AclWI GGATC 1 cut(s) 189
AcuI CTGAAG 1 cut(s) 894
AcyI GRCGYC 2 cut(s) 480, 792
AfiI CCNNNNNNNGG 3 cut(s) 310, 506, 1029
AflIII ACRYGT 1 cut(s) 422
AgsI TTSAA 1 cut(s) 565
AjiI CACGTC 1 cut(s) 893
AluBI AGCT 7 cut(s) 112, 860, 873, 937, 948, 999, 1005
AluI AGCT 7 cut(s) 112, 860, 873, 937, 948, 999, 1005
Alw26I GTCTC 3 cut(s) 413, 772, 817
AlwI GGATC 1 cut(s) 189
Ama87I CYCGRG 1 cut(s) 200
AspLEI GCGC 1 cut(s) 179
AspS9I GGNCC 1 cut(s) 497
AsuC2I CCSGG 1 cut(s) 547
AsuHPI GGTGA 3 cut(s) 314, 662, 965
AsuNHI GCTAGC 1 cut(s) 112
AvaI CYCGRG 1 cut(s) 200
AvaII GGWCC 1 cut(s) 497
BauI CACGAG 1 cut(s) 326
BccI CCATC 6 cut(s) 43, 170, 221, 277, 425, 766
BceAI ACGGC 2 cut(s) 493, 590
BcnI CCSGG 1 cut(s) 547
BcoDI GTCTC 3 cut(s) 413, 772, 817
BfaI CTAG 3 cut(s) 113, 960, 1002
BfuAI ACCTGC 2 cut(s) 140, 638
BisI GCNGC 2 cut(s) 175, 683
BlsI GCNGC 2 cut(s) 176, 684
Bme1390I CCNGG 1 cut(s) 547
Bme18I GGWCC 1 cut(s) 497
BmeT110I CYCGRG 1 cut(s) 200
BmgBI CACGTC 1 cut(s) 893
BmgT120I GGNCC 1 cut(s) 497
BmiI GGNNCC 2 cut(s) 316, 499
BmrFI CCNGG 1 cut(s) 547
BmrI ACTGGG 1 cut(s) 495
BmsI GCATC 4 cut(s) 3, 131, 500, 760
BmtI GCTAGC 1 cut(s) 116
BmuI ACTGGG 1 cut(s) 495
BplI GAGNNNNNCTC 2 cut(s) 320, 352
Bpu10I CCTNAGC 1 cut(s) 874
BpuEI CTTGAG 1 cut(s) 799
BpuMI CCSGG 1 cut(s) 547
BsaHI GRCGYC 2 cut(s) 480, 792
BsaJI CCNNGG 5 cut(s) 92, 117, 308, 972, 1023
BsaWI WCCGGW 1 cut(s) 69
Bsc4I CCNNNNNNNGG 3 cut(s) 310, 506, 1029
Bse118I RCCGGY 1 cut(s) 513
Bse1I ACTGG 4 cut(s) 51, 318, 501, 610
BseDI CCNNGG 5 cut(s) 92, 117, 308, 972, 1023
BseGI GGATG 8 cut(s) 208, 213, 436, 449, 515, 615, 758, 934
BseLI CCNNNNNNNGG 3 cut(s) 310, 506, 1029
BseMII CTCAG 3 cut(s) 554, 767, 888
BseNI ACTGG 4 cut(s) 51, 318, 501, 610
BsgI GTGCAG 2 cut(s) 118, 276
Bsh1236I CGCG 1 cut(s) 177
BsiHKCI CYCGRG 1 cut(s) 200
BsiSI CCGG 3 cut(s) 70, 514, 546
BslFI GGGAC 1 cut(s) 590
BslI CCNNNNNNNGG 3 cut(s) 310, 506, 1029
BsmAI GTCTC 3 cut(s) 413, 772, 817
BsmFI GGGAC 1 cut(s) 590
BsoBI CYCGRG 1 cut(s) 200
Bsp143I GATC 2 cut(s) 194, 235
Bsp19I CCATGG 2 cut(s) 92, 117
BspACI CCGC 6 cut(s) 145, 172, 175, 682, 982, 1030
BspCNI CTCAG 3 cut(s) 553, 768, 887
BspFNI CGCG 1 cut(s) 177
BspLI GGNNCC 2 cut(s) 316, 499
BspMI ACCTGC 2 cut(s) 140, 638
BspOI GCTAGC 1 cut(s) 116
BspPI GGATC 1 cut(s) 189
BspQI GCTCTTC 1 cut(s) 927
BsrBI CCGCTC 1 cut(s) 1030
BsrFI RCCGGY 1 cut(s) 513
BsrI ACTGG 4 cut(s) 51, 318, 501, 610
BssAI RCCGGY 1 cut(s) 513
BssECI CCNNGG 5 cut(s) 92, 117, 308, 972, 1023
BssMI GATC 2 cut(s) 194, 235
BssNI GRCGYC 2 cut(s) 480, 792
BssSI CACGAG 1 cut(s) 326
BssT1I CCWWGG 3 cut(s) 92, 117, 972
Bst2BI CACGAG 1 cut(s) 326
Bst4CI ACNGT 2 cut(s) 309, 392
Bst6I CTCTTC 2 cut(s) 411, 927
BstACI GRCGYC 2 cut(s) 480, 792
BstC8I GCNNGC 3 cut(s) 114, 469, 997
BstDEI CTNAG 4 cut(s) 76, 540, 776, 874
BstDSI CCRYGG 3 cut(s) 92, 117, 308
BstF5I GGATG 8 cut(s) 208, 213, 436, 449, 515, 615, 758, 934
BstFNI CGCG 1 cut(s) 177
BstHHI GCGC 1 cut(s) 179
BstKTI GATC 2 cut(s) 197, 238
BstMAI GTCTC 3 cut(s) 413, 772, 817
BstMBI GATC 2 cut(s) 194, 235
BstMWI GCNNNNNNNGC 3 cut(s) 185, 468, 477
BstNSI RCATGY 2 cut(s) 426, 774
BstSCI CCNGG 1 cut(s) 545
BstUI CGCG 1 cut(s) 177
BstX2I RGATCY 1 cut(s) 194
BstYI RGATCY 1 cut(s) 194
BtgI CCRYGG 3 cut(s) 92, 117, 308
BtrI CACGTC 1 cut(s) 893
BtsCI GGATG 8 cut(s) 208, 213, 436, 449, 515, 615, 758, 934
BtsI GCAGTG 1 cut(s) 293
BtsIMutI CAGTG 1 cut(s) 293
BveI ACCTGC 2 cut(s) 140, 638
Cac8I GCNNGC 3 cut(s) 114, 469, 997
CfoI GCGC 1 cut(s) 179
Cfr10I RCCGGY 1 cut(s) 513
Cfr13I GGNCC 1 cut(s) 497
CseI GACGC 4 cut(s) 194, 384, 469, 800
CspCI CAANNNNNGTGG 2 cut(s) 844, 879
CviAII CATG 4 cut(s) 93, 118, 423, 771
DdeI CTNAG 4 cut(s) 76, 540, 776, 874
DpnI GATC 2 cut(s) 196, 237
DpnII GATC 2 cut(s) 194, 235
Eam1104I CTCTTC 2 cut(s) 411, 927
EarI CTCTTC 2 cut(s) 411, 927
EciI GGCGGA 1 cut(s) 161
Eco130I CCWWGG 3 cut(s) 92, 117, 972
Eco47I GGWCC 1 cut(s) 497
Eco57I CTGAAG 1 cut(s) 894
Eco88I CYCGRG 1 cut(s) 200
EcoT14I CCWWGG 3 cut(s) 92, 117, 972
ErhI CCWWGG 3 cut(s) 92, 117, 972
FaeI CATG 4 cut(s) 96, 121, 426, 774
FaqI GGGAC 1 cut(s) 590
FatI CATG 4 cut(s) 92, 117, 422, 770
Fnu4HI GCNGC 2 cut(s) 175, 683
FokI GGATG 8 cut(s) 195, 200, 443, 456, 522, 602, 745, 941
Fsp4HI GCNGC 2 cut(s) 175, 683
FspBI CTAG 3 cut(s) 113, 960, 1002
GlaI GCGC 1 cut(s) 178
GluI GCNGC 2 cut(s) 175, 683
HapII CCGG 3 cut(s) 70, 514, 546
HgaI GACGC 4 cut(s) 194, 384, 469, 800
HhaI GCGC 1 cut(s) 179
Hin1I GRCGYC 2 cut(s) 480, 792
Hin1II CATG 4 cut(s) 96, 121, 426, 774
Hin6I GCGC 1 cut(s) 177
HinP1I GCGC 1 cut(s) 177
HincII GTYRAC 2 cut(s) 376, 537
HindII GTYRAC 2 cut(s) 376, 537
HinfI GANTC 9 cut(s) 329, 335, 380, 529, 538, 550, 671, 780, 801
HpaII CCGG 3 cut(s) 70, 514, 546
HphI GGTGA 3 cut(s) 314, 662, 965
Hpy166II GTNNAC 5 cut(s) 376, 497, 537, 653, 855
Hpy188I TCNGA 9 cut(s) 129, 184, 334, 340, 543, 777, 806, 913, 1027
Hpy188III TCNNGA 3 cut(s) 192, 384, 675
Hpy8I GTNNAC 5 cut(s) 376, 497, 537, 653, 855
Hpy99I CGWCG 8 cut(s) 188, 361, 364, 400, 479, 485, 712, 842
HpyAV CCTTC 2 cut(s) 66, 98
HpyCH4III ACNGT 2 cut(s) 309, 392
HpyCH4IV ACGT 2 cut(s) 356, 892
HpyCH4V TGCA 5 cut(s) 16, 135, 293, 647, 995
HpyF10VI GCNNNNNNNGC 3 cut(s) 185, 468, 477
HpyF3I CTNAG 4 cut(s) 76, 540, 776, 874
HpySE526I ACGT 2 cut(s) 356, 892
Hsp92I GRCGYC 2 cut(s) 480, 792
Hsp92II CATG 4 cut(s) 96, 121, 426, 774
HspAI GCGC 1 cut(s) 177
Kzo9I GATC 2 cut(s) 194, 235
LguI GCTCTTC 1 cut(s) 927
LmnI GCTCC 2 cut(s) 748, 1027
LweI GCATC 4 cut(s) 3, 131, 500, 760
MaeI CTAG 3 cut(s) 113, 960, 1002
MaeII ACGT 2 cut(s) 356, 892
MaeIII GTNAC 1 cut(s) 320
MalI GATC 2 cut(s) 196, 237
MbiI CCGCTC 1 cut(s) 1030
MboI GATC 2 cut(s) 194, 235
MflI RGATCY 1 cut(s) 194
MluCI AATT 1 cut(s) 847
MlyI GAGTC 5 cut(s) 329, 338, 532, 774, 810
MmeI TCCRAC 2 cut(s) 207, 784
MseI TTAA 3 cut(s) 518, 558, 1036
MslI CAYNNNNRTG 2 cut(s) 246, 923
MspI CCGG 3 cut(s) 70, 514, 546
MspR9I CCNGG 1 cut(s) 547
MvnI CGCG 1 cut(s) 177
MwoI GCNNNNNNNGC 3 cut(s) 185, 468, 477
NciI CCSGG 1 cut(s) 547
NcoI CCATGG 2 cut(s) 92, 117
NdeII GATC 2 cut(s) 194, 235
NheI GCTAGC 1 cut(s) 112
NlaIII CATG 4 cut(s) 96, 121, 426, 774
NlaIV GGNNCC 2 cut(s) 316, 499
NmuCI GTSAC 1 cut(s) 320
NspI RCATGY 2 cut(s) 426, 774
PaeR7I CTCGAG 1 cut(s) 200
PaqCI CACCTGC 1 cut(s) 638
PciI ACATGT 1 cut(s) 422
PciSI GCTCTTC 1 cut(s) 927
PcsI WCGNNNNNNNCGW 1 cut(s) 480
PfeI GAWTC 4 cut(s) 380, 529, 550, 671
PflFI GACNNNGTC 2 cut(s) 83, 479
PkrI GCNGC 2 cut(s) 176, 684
PleI GAGTC 5 cut(s) 329, 337, 532, 774, 809
PpsI GAGTC 5 cut(s) 329, 337, 532, 774, 809
PscI ACATGT 1 cut(s) 422
PspN4I GGNNCC 2 cut(s) 316, 499
PspPI GGNCC 1 cut(s) 497
PspXI VCTCGAGB 1 cut(s) 200
PsuI RGATCY 1 cut(s) 194
PsyI GACNNNGTC 2 cut(s) 83, 479
RseI CAYNNNNRTG 2 cut(s) 246, 923
SapI GCTCTTC 1 cut(s) 927
SaqAI TTAA 3 cut(s) 518, 558, 1036
SatI GCNGC 2 cut(s) 175, 683
Sau3AI GATC 2 cut(s) 194, 235
Sau96I GGNCC 1 cut(s) 497
SchI GAGTC 5 cut(s) 329, 338, 532, 774, 810
ScrFI CCNGG 1 cut(s) 547
SfaNI GCATC 4 cut(s) 3, 131, 500, 760
Sfr274I CTCGAG 1 cut(s) 200
SinI GGWCC 1 cut(s) 497
SlaI CTCGAG 1 cut(s) 200
SmiMI CAYNNNNRTG 2 cut(s) 246, 923
SmlI CTYRAG 2 cut(s) 200, 814
SmoI CTYRAG 2 cut(s) 200, 814
Sse9I AATT 1 cut(s) 847
SsiI CCGC 6 cut(s) 145, 172, 175, 682, 982, 1030
SspI AATATT 1 cut(s) 787
SspMI CTAG 3 cut(s) 113, 960, 1002
StyD4I CCNGG 1 cut(s) 545
StyI CCWWGG 3 cut(s) 92, 117, 972
TaaI ACNGT 2 cut(s) 309, 392
TaiI ACGT 2 cut(s) 359, 895
TaqI TCGA 5 cut(s) 38, 201, 234, 474, 489
TasI AATT 1 cut(s) 847
TauI GCSGC 2 cut(s) 177, 685
TfiI GAWTC 4 cut(s) 380, 529, 550, 671
Tru1I TTAA 3 cut(s) 518, 558, 1036
Tru9I TTAA 3 cut(s) 518, 558, 1036
TscAI CASTG 1 cut(s) 300
TseFI GTSAC 1 cut(s) 320
Tsp45I GTSAC 1 cut(s) 320
TspDTI ATGAA 6 cut(s) 17, 247, 604, 714, 811, 945
TspGWI ACGGA 2 cut(s) 438, 855
TspRI CASTG 1 cut(s) 300
Tth111I GACNNNGTC 2 cut(s) 83, 479
VpaK11BI GGWCC 1 cut(s) 497
XceI RCATGY 2 cut(s) 426, 774
XhoI CTCGAG 1 cut(s) 200
XspI CTAG 3 cut(s) 113, 960, 1002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.