Rh5CG345100

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0008003
Physical Location & Seq
Reverse (-)
39773187 .. 39774900
1714 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG345100.1

Sequence Viewer

Length: 1050 bp
ATGAACAAGAAGATGCAGTCGCCACCAACAACACCATCGAAACGCAATACCAGTCCTTCCCTTTTCTTCCGGTGCTTAGACCTTGTCCTTCCATGGCTAACCCCACAAGAGCTGGCCATGGCATCTCTGACCTGCACCACCCTCCGCAACCTCTCCAAGTCCATCACTCTCCGCCGTGTCTCCGACGCTTCCAGATCCCTCGAGCCACATCCCATCCCATTCCATAACTCACTCGATCAACACCCTTATGCCTACTTCATCTACACCCCTTCCTCTCTAACCCCATCATCTTCTTCTTCTCCTTCACTGCTTCGCCAACCGTGGGGTTCCAGTCACCACGAGACAGACTCGGACACCAGAACTGAAACGTCGTCGTTGCGTTTTGTTGACGAATCGGGAAACTGTGCGTCGTCTGGGTGTGAATGTGAGGAGACATGTGAGGATGGGAAAGAGGGGTGTCCGTGTGTTGTTGGATTTGCTGGCTTCGACGGCGTCGTTTTCGAGTGTGGACCCAGTTGTGGATGCCGGTTAAGTTGTGGGAATCGGTTGACTCAGACCGGGATTCAGGTTAAGTTGAAGATTGTGAGGGACAGAAGAAAAGGGTGGGGTTTGTATGCCGACCAGTTCATCCCAAAGGGTCGGTTTGTGTGCGAGTATGCAGGTGAACTATTGACAACAAAGGAATCAAGACTGCGGCAAGAAATGTATGATGAACTTTCGTCGGGTGGTCATTTCTCCCCTGCTCTTTTGGTTGTGAGGGAGCATCTTCCATCCAAAAAGGCATGTCTGAGACTCAATATTGATGCCACAAGAATCGGAAATGTCTCAAGGTTCATCAACCATTCTTGCGACGGAGGTAATTTGTCCACAGCTCTTGTTAGAAGCTCAGGGGCTTTGCTTCCACGTCTTTGCTTTTTTGCTTCAGATGACATAAAAGTGGATGAAGAGTTTACATTTAGCTATGGTGAAACTAGGCTGAACTCCAAGGGTTTGCGGTGTTTTTGTGCAAGCTCTTGCTGTGTTGGTATATTACCCTCGGAGCAGACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00310 map00310
Pfam Domains
Protein Families
Pre-SET SET

Protein Analysis

349

Amino Acids

38.46

Weight (kDa)

7.78

Isoelectric Point (pI)

62.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SET PF00856 201 - 322 6.2e-20 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 650
Acc36I ACCTGC 2 cut(s) 140, 650
AciI CCGC 4 cut(s) 145, 172, 694, 994
AclWI GGATC 1 cut(s) 189
AcoI YGGCCR 1 cut(s) 114
AcuI CTGAAG 1 cut(s) 906
AcyI GRCGYC 1 cut(s) 492
AfiI CCNNNNNNNGG 2 cut(s) 322, 518
AflIII ACRYGT 1 cut(s) 434
AgsI TTSAA 1 cut(s) 577
AjiI CACGTC 1 cut(s) 905
AluBI AGCT 5 cut(s) 112, 872, 885, 960, 1011
AluI AGCT 5 cut(s) 112, 872, 885, 960, 1011
Alw26I GTCTC 5 cut(s) 184, 335, 425, 784, 829
AlwI GGATC 1 cut(s) 189
Ama87I CYCGRG 1 cut(s) 200
AoxI GGCC 1 cut(s) 114
AspS9I GGNCC 1 cut(s) 509
AsuC2I CCSGG 1 cut(s) 559
AsuHPI GGTGA 3 cut(s) 326, 674, 977
AvaI CYCGRG 1 cut(s) 200
AvaII GGWCC 1 cut(s) 509
BalI TGGCCA 1 cut(s) 116
BauI CACGAG 1 cut(s) 338
BccI CCATC 6 cut(s) 43, 170, 221, 292, 437, 778
BceAI ACGGC 2 cut(s) 159, 505
BcnI CCSGG 1 cut(s) 559
BcoDI GTCTC 5 cut(s) 184, 335, 425, 784, 829
BfaI CTAG 1 cut(s) 972
BfuAI ACCTGC 2 cut(s) 140, 650
BisI GCNGC 1 cut(s) 695
BlsI GCNGC 1 cut(s) 696
Bme1390I CCNGG 1 cut(s) 559
Bme18I GGWCC 1 cut(s) 509
BmeT110I CYCGRG 1 cut(s) 200
BmgBI CACGTC 1 cut(s) 905
BmgT120I GGNCC 1 cut(s) 509
BmiI GGNNCC 2 cut(s) 328, 511
BmrFI CCNGG 1 cut(s) 559
BmrI ACTGGG 1 cut(s) 507
BmsI GCATC 5 cut(s) 3, 131, 512, 772, 793
BmuI ACTGGG 1 cut(s) 507
BplI GAGNNNNNCTC 2 cut(s) 332, 364
Bpu10I CCTNAGC 1 cut(s) 886
BpuEI CTTGAG 1 cut(s) 811
BpuMI CCSGG 1 cut(s) 559
BsaHI GRCGYC 1 cut(s) 492
BsaJI CCNNGG 5 cut(s) 92, 117, 320, 984, 1035
BsaWI WCCGGW 1 cut(s) 69
Bsc4I CCNNNNNNNGG 2 cut(s) 322, 518
Bse118I RCCGGY 1 cut(s) 525
Bse1I ACTGG 4 cut(s) 51, 330, 513, 622
BseDI CCNNGG 5 cut(s) 92, 117, 320, 984, 1035
BseGI GGATG 7 cut(s) 208, 213, 448, 527, 627, 770, 946
BseLI CCNNNNNNNGG 2 cut(s) 322, 518
BseMII CTCAG 3 cut(s) 566, 779, 900
BseNI ACTGG 4 cut(s) 51, 330, 513, 622
BseRI GAGGAG 1 cut(s) 443
BsgI GTGCAG 1 cut(s) 118
BshFI GGCC 1 cut(s) 116
BsiHKCI CYCGRG 1 cut(s) 200
BsiSI CCGG 3 cut(s) 70, 526, 558
BslFI GGGAC 1 cut(s) 602
BslI CCNNNNNNNGG 2 cut(s) 322, 518
BsmAI GTCTC 5 cut(s) 184, 335, 425, 784, 829
BsmFI GGGAC 1 cut(s) 602
BsnI GGCC 1 cut(s) 116
BsoBI CYCGRG 1 cut(s) 200
Bsp143I GATC 2 cut(s) 194, 235
Bsp19I CCATGG 2 cut(s) 92, 117
BspACI CCGC 4 cut(s) 145, 172, 694, 994
BspANI GGCC 1 cut(s) 116
BspCNI CTCAG 3 cut(s) 565, 780, 899
BspLI GGNNCC 2 cut(s) 328, 511
BspMI ACCTGC 2 cut(s) 140, 650
BspPI GGATC 1 cut(s) 189
BsrFI RCCGGY 1 cut(s) 525
BsrI ACTGG 4 cut(s) 51, 330, 513, 622
BssAI RCCGGY 1 cut(s) 525
BssECI CCNNGG 5 cut(s) 92, 117, 320, 984, 1035
BssMI GATC 2 cut(s) 194, 235
BssNI GRCGYC 1 cut(s) 492
BssSI CACGAG 1 cut(s) 338
BssT1I CCWWGG 3 cut(s) 92, 117, 984
Bst2BI CACGAG 1 cut(s) 338
Bst4CI ACNGT 2 cut(s) 321, 404
Bst6I CTCTTC 1 cut(s) 939
BstACI GRCGYC 1 cut(s) 492
BstC8I GCNNGC 3 cut(s) 114, 481, 1009
BstDEI CTNAG 4 cut(s) 76, 552, 788, 886
BstDSI CCRYGG 3 cut(s) 92, 117, 320
BstF5I GGATG 7 cut(s) 208, 213, 448, 527, 627, 770, 946
BstKTI GATC 2 cut(s) 197, 238
BstMAI GTCTC 5 cut(s) 184, 335, 425, 784, 829
BstMBI GATC 2 cut(s) 194, 235
BstMWI GCNNNNNNNGC 1 cut(s) 489
BstNSI RCATGY 2 cut(s) 438, 786
BstSCI CCNGG 1 cut(s) 557
BstX2I RGATCY 1 cut(s) 194
BstYI RGATCY 1 cut(s) 194
BsuRI GGCC 1 cut(s) 116
BtgI CCRYGG 3 cut(s) 92, 117, 320
BtrI CACGTC 1 cut(s) 905
BtsCI GGATG 7 cut(s) 208, 213, 448, 527, 627, 770, 946
BtsI GCAGTG 1 cut(s) 305
BtsIMutI CAGTG 1 cut(s) 305
BveI ACCTGC 2 cut(s) 140, 650
Cac8I GCNNGC 3 cut(s) 114, 481, 1009
Cfr10I RCCGGY 1 cut(s) 525
Cfr13I GGNCC 1 cut(s) 509
CseI GACGC 3 cut(s) 194, 396, 481
CspCI CAANNNNNGTGG 2 cut(s) 856, 891
CviAII CATG 4 cut(s) 93, 118, 435, 783
DdeI CTNAG 4 cut(s) 76, 552, 788, 886
DpnI GATC 2 cut(s) 196, 237
DpnII GATC 2 cut(s) 194, 235
EaeI YGGCCR 1 cut(s) 114
Eam1104I CTCTTC 1 cut(s) 939
EarI CTCTTC 1 cut(s) 939
EciI GGCGGA 1 cut(s) 161
Eco130I CCWWGG 3 cut(s) 92, 117, 984
Eco47I GGWCC 1 cut(s) 509
Eco57I CTGAAG 1 cut(s) 906
Eco88I CYCGRG 1 cut(s) 200
EcoT14I CCWWGG 3 cut(s) 92, 117, 984
ErhI CCWWGG 3 cut(s) 92, 117, 984
FaeI CATG 4 cut(s) 96, 121, 438, 786
FaqI GGGAC 1 cut(s) 602
FatI CATG 4 cut(s) 92, 117, 434, 782
Fnu4HI GCNGC 1 cut(s) 695
FokI GGATG 7 cut(s) 195, 200, 455, 534, 614, 757, 953
Fsp4HI GCNGC 1 cut(s) 695
FspBI CTAG 1 cut(s) 972
GluI GCNGC 1 cut(s) 695
HaeIII GGCC 1 cut(s) 116
HapII CCGG 3 cut(s) 70, 526, 558
HgaI GACGC 3 cut(s) 194, 396, 481
Hin1I GRCGYC 1 cut(s) 492
Hin1II CATG 4 cut(s) 96, 121, 438, 786
HincII GTYRAC 2 cut(s) 388, 549
HindII GTYRAC 2 cut(s) 388, 549
HinfI GANTC 8 cut(s) 347, 392, 541, 550, 562, 683, 792, 813
HpaII CCGG 3 cut(s) 70, 526, 558
HphI GGTGA 3 cut(s) 326, 674, 977
Hpy166II GTNNAC 6 cut(s) 388, 509, 549, 665, 867, 951
Hpy188I TCNGA 8 cut(s) 129, 184, 352, 555, 789, 818, 925, 1039
Hpy188III TCNNGA 3 cut(s) 192, 396, 687
Hpy8I GTNNAC 6 cut(s) 388, 509, 549, 665, 867, 951
Hpy99I CGWCG 8 cut(s) 188, 373, 376, 412, 491, 497, 724, 854
HpyAV CCTTC 4 cut(s) 66, 98, 279, 312
HpyCH4III ACNGT 2 cut(s) 321, 404
HpyCH4IV ACGT 2 cut(s) 368, 904
HpyCH4V TGCA 4 cut(s) 16, 135, 659, 1007
HpyF10VI GCNNNNNNNGC 1 cut(s) 489
HpyF3I CTNAG 4 cut(s) 76, 552, 788, 886
HpySE526I ACGT 2 cut(s) 368, 904
Hsp92I GRCGYC 1 cut(s) 492
Hsp92II CATG 4 cut(s) 96, 121, 438, 786
Kzo9I GATC 2 cut(s) 194, 235
LmnI GCTCC 2 cut(s) 760, 1039
LweI GCATC 5 cut(s) 3, 131, 512, 772, 793
MaeI CTAG 1 cut(s) 972
MaeII ACGT 2 cut(s) 368, 904
MaeIII GTNAC 1 cut(s) 332
MalI GATC 2 cut(s) 196, 237
MboI GATC 2 cut(s) 194, 235
MboII GAAGA 9 cut(s) 22, 58, 282, 285, 288, 589, 606, 758, 956
MflI RGATCY 1 cut(s) 194
MlsI TGGCCA 1 cut(s) 116
MluCI AATT 1 cut(s) 859
MluNI TGGCCA 1 cut(s) 116
MlyI GAGTC 3 cut(s) 341, 544, 786
MmeI TCCRAC 2 cut(s) 207, 451
Mox20I TGGCCA 1 cut(s) 116
MscI TGGCCA 1 cut(s) 116
MseI TTAA 3 cut(s) 530, 570, 1048
MslI CAYNNNNRTG 2 cut(s) 246, 935
Msp20I TGGCCA 1 cut(s) 116
MspI CCGG 3 cut(s) 70, 526, 558
MspR9I CCNGG 1 cut(s) 559
MwoI GCNNNNNNNGC 1 cut(s) 489
NciI CCSGG 1 cut(s) 559
NcoI CCATGG 2 cut(s) 92, 117
NdeII GATC 2 cut(s) 194, 235
NlaIII CATG 4 cut(s) 96, 121, 438, 786
NlaIV GGNNCC 2 cut(s) 328, 511
NmuCI GTSAC 1 cut(s) 332
NspI RCATGY 2 cut(s) 438, 786
PaeR7I CTCGAG 1 cut(s) 200
PaqCI CACCTGC 1 cut(s) 650
PciI ACATGT 1 cut(s) 434
PcsI WCGNNNNNNNCGW 1 cut(s) 492
PfeI GAWTC 5 cut(s) 392, 541, 562, 683, 813
PflFI GACNNNGTC 2 cut(s) 83, 491
PkrI GCNGC 1 cut(s) 696
PleI GAGTC 3 cut(s) 341, 544, 786
PpsI GAGTC 3 cut(s) 341, 544, 786
PscI ACATGT 1 cut(s) 434
PspN4I GGNNCC 2 cut(s) 328, 511
PspPI GGNCC 1 cut(s) 509
PspXI VCTCGAGB 1 cut(s) 200
PsuI RGATCY 1 cut(s) 194
PsyI GACNNNGTC 2 cut(s) 83, 491
RseI CAYNNNNRTG 2 cut(s) 246, 935
SaqAI TTAA 3 cut(s) 530, 570, 1048
SatI GCNGC 1 cut(s) 695
Sau3AI GATC 2 cut(s) 194, 235
Sau96I GGNCC 1 cut(s) 509
SchI GAGTC 3 cut(s) 341, 544, 786
ScrFI CCNGG 1 cut(s) 559
SfaNI GCATC 5 cut(s) 3, 131, 512, 772, 793
Sfr274I CTCGAG 1 cut(s) 200
SinI GGWCC 1 cut(s) 509
SlaI CTCGAG 1 cut(s) 200
SmiMI CAYNNNNRTG 2 cut(s) 246, 935
SmlI CTYRAG 2 cut(s) 200, 826
SmoI CTYRAG 2 cut(s) 200, 826
Sse9I AATT 1 cut(s) 859
SsiI CCGC 4 cut(s) 145, 172, 694, 994
SspI AATATT 1 cut(s) 799
SspMI CTAG 1 cut(s) 972
StyD4I CCNGG 1 cut(s) 557
StyI CCWWGG 3 cut(s) 92, 117, 984
TaaI ACNGT 2 cut(s) 321, 404
TaiI ACGT 2 cut(s) 371, 907
TaqI TCGA 5 cut(s) 38, 201, 234, 486, 501
TasI AATT 1 cut(s) 859
TauI GCSGC 1 cut(s) 697
TfiI GAWTC 5 cut(s) 392, 541, 562, 683, 813
Tru1I TTAA 3 cut(s) 530, 570, 1048
Tru9I TTAA 3 cut(s) 530, 570, 1048
TscAI CASTG 1 cut(s) 312
TseFI GTSAC 1 cut(s) 332
Tsp45I GTSAC 1 cut(s) 332
TspDTI ATGAA 6 cut(s) 17, 247, 616, 726, 823, 957
TspGWI ACGGA 2 cut(s) 450, 867
TspRI CASTG 1 cut(s) 312
Tth111I GACNNNGTC 2 cut(s) 83, 491
VpaK11BI GGWCC 1 cut(s) 509
XceI RCATGY 2 cut(s) 438, 786
XhoI CTCGAG 1 cut(s) 200
XspI CTAG 1 cut(s) 972
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.