Belongs to the ubiquitin-conjugating enzyme family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53023 AT1G53025 AT1G53025 |
| fragaria_vesca | FvH4_6g26220 FvH4_6g26220 FvH4_6g26220 FvH4_6g26220 |
| malus_domestica | MD09G1247000.v1.1 MD17G1240000.v1.1 |
| prunus_persica | Prupe.3G132700_v2.0.a1 |
| pyrus_communis | pycom09g16440 pycom17g24330 |
| rosa_chinensis | RchiOBHm_Chr2g0126571 |
| rosa_laevigata | RLG00000018913 |
| rosa_multiflora | Rmu_sc0002369.1_g000030 Rmu_sc0007463.1_g000009 Rmu_sc0021234.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00117080 |
| rosa_rugosa | Rorug02G0263700 Rorug02G0263800 Rorug02G0263900 |
| rosa_samantha | Rh2AG320900 Rh2BG329200 Rh2CG309000 Rh2DG348500 |
| rosa_wichuraiana | Rw2G025990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 642 |
| AccII | CGCG | 1 cut(s) | 1179 |
| AciI | CCGC | 4 cut(s) | 12, 607, 1139, 1278 |
| AclWI | GGATC | 5 cut(s) | 118, 160, 381, 600, 1351 |
| AcsI | RAATTY | 4 cut(s) | 566, 654, 672, 874 |
| AcuI | CTGAAG | 1 cut(s) | 489 |
| AdeI | CACNNNGTG | 1 cut(s) | 401 |
| AfaI | GTAC | 4 cut(s) | 92, 842, 881, 1082 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 642 |
| AjnI | CCWGG | 4 cut(s) | 349, 371, 949, 1027 |
| AleI | CACNNNNGTG | 1 cut(s) | 1232 |
| AluBI | AGCT | 4 cut(s) | 98, 992, 1301, 1395 |
| AluI | AGCT | 4 cut(s) | 98, 992, 1301, 1395 |
| Alw21I | GWGCWC | 1 cut(s) | 1189 |
| Alw26I | GTCTC | 5 cut(s) | 46, 555, 806, 911, 985 |
| Alw44I | GTGCAC | 1 cut(s) | 1185 |
| AlwI | GGATC | 5 cut(s) | 118, 160, 381, 600, 1351 |
| AoxI | GGCC | 2 cut(s) | 3, 1136 |
| ApaLI | GTGCAC | 1 cut(s) | 1185 |
| ApeKI | GCWGC | 3 cut(s) | 628, 1202, 1392 |
| ApoI | RAATTY | 4 cut(s) | 566, 654, 672, 874 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 686, 718, 770, 802 |
| AspA2I | CCTAGG | 1 cut(s) | 910 |
| AspS9I | GGNCC | 2 cut(s) | 755, 946 |
| AsuC2I | CCSGG | 1 cut(s) | 762 |
| AsuHPI | GGTGA | 5 cut(s) | 311, 387, 587, 819, 1324 |
| AvaII | GGWCC | 2 cut(s) | 755, 946 |
| AvrII | CCTAGG | 1 cut(s) | 910 |
| BaeGI | GKGCMC | 3 cut(s) | 767, 1189, 1229 |
| BanII | GRGCYC | 1 cut(s) | 1014 |
| BbsI | GAAGAC | 2 cut(s) | 234, 851 |
| Bbv12I | GWGCWC | 1 cut(s) | 1189 |
| BbvI | GCAGC | 2 cut(s) | 640, 1214 |
| BccI | CCATC | 3 cut(s) | 272, 418, 829 |
| BciT130I | CCWGG | 4 cut(s) | 351, 373, 951, 1029 |
| BciVI | GTATCC | 2 cut(s) | 548, 1084 |
| BcnI | CCSGG | 1 cut(s) | 762 |
| BcoDI | GTCTC | 5 cut(s) | 46, 555, 806, 911, 985 |
| BfaI | CTAG | 4 cut(s) | 99, 504, 911, 1389 |
| BfuI | GTATCC | 2 cut(s) | 548, 1084 |
| BglII | AGATCT | 1 cut(s) | 436 |
| BisI | GCNGC | 5 cut(s) | 607, 629, 1139, 1203, 1393 |
| BlnI | CCTAGG | 1 cut(s) | 910 |
| BlsI | GCNGC | 5 cut(s) | 608, 630, 1140, 1204, 1394 |
| BmcAI | AGTACT | 1 cut(s) | 92 |
| Bme1390I | CCNGG | 5 cut(s) | 351, 373, 762, 951, 1029 |
| Bme18I | GGWCC | 2 cut(s) | 755, 946 |
| BmgT120I | GGNCC | 2 cut(s) | 755, 946 |
| BmiI | GGNNCC | 4 cut(s) | 513, 947, 948, 1276 |
| BmrFI | CCNGG | 5 cut(s) | 351, 373, 762, 951, 1029 |
| BmsI | GCATC | 1 cut(s) | 73 |
| BpiI | GAAGAC | 2 cut(s) | 234, 851 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 12, 44 |
| BpmI | CTGGAG | 1 cut(s) | 39 |
| BpuEI | CTTGAG | 1 cut(s) | 38 |
| BpuMI | CCSGG | 1 cut(s) | 762 |
| Bsa29I | ATCGAT | 1 cut(s) | 385 |
| BsaBI | GATNNNNATC | 1 cut(s) | 391 |
| BsaJI | CCNNGG | 5 cut(s) | 371, 910, 949, 950, 1028 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 642 |
| Bse118I | RCCGGY | 1 cut(s) | 514 |
| Bse3DI | GCAATG | 1 cut(s) | 532 |
| Bse8I | GATNNNNATC | 1 cut(s) | 391 |
| BseBI | CCWGG | 4 cut(s) | 351, 373, 951, 1029 |
| BseCI | ATCGAT | 1 cut(s) | 385 |
| BseDI | CCNNGG | 5 cut(s) | 371, 910, 949, 950, 1028 |
| BseGI | GGATG | 3 cut(s) | 410, 667, 1250 |
| BseJI | GATNNNNATC | 1 cut(s) | 391 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 642 |
| BseMI | GCAATG | 1 cut(s) | 532 |
| BseMII | CTCAG | 4 cut(s) | 108, 338, 728, 893 |
| BseSI | GKGCMC | 3 cut(s) | 767, 1189, 1229 |
| BseXI | GCAGC | 2 cut(s) | 640, 1214 |
| Bsh1236I | CGCG | 1 cut(s) | 1179 |
| BshFI | GGCC | 2 cut(s) | 5, 1138 |
| BshVI | ATCGAT | 1 cut(s) | 385 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1189 |
| BsiSI | CCGG | 2 cut(s) | 515, 761 |
| BslFI | GGGAC | 1 cut(s) | 932 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 642 |
| BsmAI | GTCTC | 5 cut(s) | 46, 555, 806, 911, 985 |
| BsmBI | CGTCTC | 1 cut(s) | 46 |
| BsmFI | GGGAC | 1 cut(s) | 932 |
| BsmI | GAATGC | 2 cut(s) | 1009, 1264 |
| BsnI | GGCC | 2 cut(s) | 5, 1138 |
| Bsp1286I | GDGCHC | 4 cut(s) | 767, 1014, 1189, 1229 |
| Bsp143I | GATC | 8 cut(s) | 110, 127, 152, 382, 386, 436, 592, 1343 |
| Bsp68I | TCGCGA | 1 cut(s) | 1179 |
| BspACI | CCGC | 4 cut(s) | 12, 607, 1139, 1278 |
| BspANI | GGCC | 2 cut(s) | 5, 1138 |
| BspCNI | CTCAG | 4 cut(s) | 107, 337, 729, 894 |
| BspDI | ATCGAT | 1 cut(s) | 385 |
| BspFNI | CGCG | 1 cut(s) | 1179 |
| BspLI | GGNNCC | 4 cut(s) | 513, 947, 948, 1276 |
| BspPI | GGATC | 5 cut(s) | 118, 160, 381, 600, 1351 |
| BsrDI | GCAATG | 1 cut(s) | 532 |
| BsrFI | RCCGGY | 1 cut(s) | 514 |
| BssAI | RCCGGY | 1 cut(s) | 514 |
| BssECI | CCNNGG | 5 cut(s) | 371, 910, 949, 950, 1028 |
| BssMI | GATC | 8 cut(s) | 110, 127, 152, 382, 386, 436, 592, 1343 |
| BssT1I | CCWWGG | 1 cut(s) | 910 |
| Bst2UI | CCWGG | 4 cut(s) | 351, 373, 951, 1029 |
| Bst4CI | ACNGT | 7 cut(s) | 80, 299, 460, 536, 558, 782, 1355 |
| Bst6I | CTCTTC | 3 cut(s) | 13, 372, 809 |
| BstC8I | GCNNGC | 1 cut(s) | 426 |
| BstDEI | CTNAG | 9 cut(s) | 87, 94, 324, 417, 737, 902, 1130, 1143, 1302 |
| BstF5I | GGATG | 3 cut(s) | 410, 667, 1250 |
| BstFNI | CGCG | 1 cut(s) | 1179 |
| BstKTI | GATC | 8 cut(s) | 113, 130, 155, 385, 389, 439, 595, 1346 |
| BstMAI | GTCTC | 5 cut(s) | 46, 555, 806, 911, 985 |
| BstMBI | GATC | 8 cut(s) | 110, 127, 152, 382, 386, 436, 592, 1343 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 1211, 1298 |
| BstNI | CCWGG | 4 cut(s) | 351, 373, 951, 1029 |
| BstNSI | RCATGY | 1 cut(s) | 1209 |
| BstSCI | CCNGG | 5 cut(s) | 349, 371, 760, 949, 1027 |
| BstSLI | GKGCMC | 3 cut(s) | 767, 1189, 1229 |
| BstUI | CGCG | 1 cut(s) | 1179 |
| BstV1I | GCAGC | 2 cut(s) | 640, 1214 |
| BstV2I | GAAGAC | 2 cut(s) | 234, 851 |
| BstX2I | RGATCY | 1 cut(s) | 436 |
| BstYI | RGATCY | 1 cut(s) | 436 |
| Bsu15I | ATCGAT | 1 cut(s) | 385 |
| BsuI | GTATCC | 2 cut(s) | 548, 1084 |
| BsuRI | GGCC | 2 cut(s) | 5, 1138 |
| BsuTUI | ATCGAT | 1 cut(s) | 385 |
| BtsCI | GGATG | 3 cut(s) | 410, 667, 1250 |
| BtsIMutI | CAGTG | 2 cut(s) | 85, 123 |
| BtuMI | TCGCGA | 1 cut(s) | 1179 |
| Cac8I | GCNNGC | 1 cut(s) | 426 |
| Cfr10I | RCCGGY | 1 cut(s) | 514 |
| Cfr13I | GGNCC | 2 cut(s) | 755, 946 |
| ClaI | ATCGAT | 1 cut(s) | 385 |
| CseI | GACGC | 1 cut(s) | 430 |
| Csp6I | GTAC | 4 cut(s) | 91, 841, 880, 1081 |
| CviAII | CATG | 7 cut(s) | 217, 310, 447, 610, 776, 1034, 1206 |
| CviQI | GTAC | 4 cut(s) | 91, 841, 880, 1081 |
| DdeI | CTNAG | 9 cut(s) | 87, 94, 324, 417, 737, 902, 1130, 1143, 1302 |
| DpnI | GATC | 8 cut(s) | 112, 129, 154, 384, 388, 438, 594, 1345 |
| DpnII | GATC | 8 cut(s) | 110, 127, 152, 382, 386, 436, 592, 1343 |
| DraIII | CACNNNGTG | 1 cut(s) | 401 |
| Eam1104I | CTCTTC | 3 cut(s) | 13, 372, 809 |
| EarI | CTCTTC | 3 cut(s) | 13, 372, 809 |
| Eco130I | CCWWGG | 1 cut(s) | 910 |
| Eco24I | GRGCYC | 1 cut(s) | 1014 |
| Eco47I | GGWCC | 2 cut(s) | 755, 946 |
| Eco57I | CTGAAG | 1 cut(s) | 489 |
| EcoO109I | RGGNCCY | 2 cut(s) | 755, 946 |
| EcoRI | GAATTC | 1 cut(s) | 654 |
| EcoRII | CCWGG | 4 cut(s) | 349, 371, 949, 1027 |
| EcoT14I | CCWWGG | 1 cut(s) | 910 |
| EcoT38I | GRGCYC | 1 cut(s) | 1014 |
| ErhI | CCWWGG | 1 cut(s) | 910 |
| Esp3I | CGTCTC | 1 cut(s) | 46 |
| FaeI | CATG | 7 cut(s) | 220, 313, 450, 613, 779, 1037, 1209 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 351, 383 |
| FaqI | GGGAC | 1 cut(s) | 932 |
| FatI | CATG | 7 cut(s) | 216, 309, 446, 609, 775, 1033, 1205 |
| Fnu4HI | GCNGC | 5 cut(s) | 607, 629, 1139, 1203, 1393 |
| FokI | GGATG | 3 cut(s) | 397, 674, 1237 |
| FriOI | GRGCYC | 1 cut(s) | 1014 |
| Fsp4HI | GCNGC | 5 cut(s) | 607, 629, 1139, 1203, 1393 |
| FspBI | CTAG | 4 cut(s) | 99, 504, 911, 1389 |
| GluI | GCNGC | 5 cut(s) | 607, 629, 1139, 1203, 1393 |
| GsuI | CTGGAG | 1 cut(s) | 39 |
| HaeIII | GGCC | 2 cut(s) | 5, 1138 |
| HapII | CCGG | 2 cut(s) | 515, 761 |
| HgaI | GACGC | 1 cut(s) | 430 |
| Hin1II | CATG | 7 cut(s) | 220, 313, 450, 613, 779, 1037, 1209 |
| HinfI | GANTC | 4 cut(s) | 313, 868, 904, 1037 |
| HpaII | CCGG | 2 cut(s) | 515, 761 |
| HphI | GGTGA | 5 cut(s) | 311, 387, 587, 819, 1324 |
| Hpy166II | GTNNAC | 3 cut(s) | 340, 841, 1187 |
| Hpy188I | TCNGA | 9 cut(s) | 110, 115, 436, 469, 592, 622, 738, 903, 1243 |
| Hpy188III | TCNNGA | 5 cut(s) | 18, 150, 659, 1074, 1178 |
| Hpy8I | GTNNAC | 3 cut(s) | 340, 841, 1187 |
| HpyAV | CCTTC | 4 cut(s) | 474, 676, 1024, 1052 |
| HpyCH4III | ACNGT | 7 cut(s) | 80, 299, 460, 536, 558, 782, 1355 |
| HpyCH4IV | ACGT | 1 cut(s) | 1183 |
| HpyCH4V | TGCA | 6 cut(s) | 164, 309, 319, 1007, 1187, 1262 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 1211, 1298 |
| HpyF3I | CTNAG | 9 cut(s) | 87, 94, 324, 417, 737, 902, 1130, 1143, 1302 |
| HpySE526I | ACGT | 1 cut(s) | 1183 |
| Hsp92II | CATG | 7 cut(s) | 220, 313, 450, 613, 779, 1037, 1209 |
| KflI | GGGWCCC | 1 cut(s) | 946 |
| Kzo9I | GATC | 8 cut(s) | 110, 127, 152, 382, 386, 436, 592, 1343 |
| LmnI | GCTCC | 3 cut(s) | 490, 1052, 1280 |
| Lsp1109I | GCAGC | 2 cut(s) | 640, 1214 |
| LweI | GCATC | 1 cut(s) | 73 |
| MaeI | CTAG | 4 cut(s) | 99, 504, 911, 1389 |
| MaeII | ACGT | 1 cut(s) | 1183 |
| MaeIII | GTNAC | 1 cut(s) | 1321 |
| MalI | GATC | 8 cut(s) | 112, 129, 154, 384, 388, 438, 594, 1345 |
| MboI | GATC | 8 cut(s) | 110, 127, 152, 382, 386, 436, 592, 1343 |
| MboII | GAAGA | 7 cut(s) | 128, 239, 359, 593, 796, 851, 1009 |
| MflI | RGATCY | 1 cut(s) | 436 |
| MhlI | GDGCHC | 4 cut(s) | 767, 1014, 1189, 1229 |
| MluCI | AATT | 7 cut(s) | 184, 566, 654, 672, 874, 940, 1283 |
| MlyI | GAGTC | 3 cut(s) | 307, 913, 1046 |
| MmeI | TCCRAC | 2 cut(s) | 88, 1030 |
| MseI | TTAA | 2 cut(s) | 134, 561 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1232 |
| MspA1I | CMGCKG | 1 cut(s) | 1395 |
| MspI | CCGG | 2 cut(s) | 515, 761 |
| MspR9I | CCNGG | 5 cut(s) | 351, 373, 762, 951, 1029 |
| Mva1269I | GAATGC | 2 cut(s) | 1009, 1264 |
| MvaI | CCWGG | 4 cut(s) | 351, 373, 951, 1029 |
| MvnI | CGCG | 1 cut(s) | 1179 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 1211, 1298 |
| NciI | CCSGG | 1 cut(s) | 762 |
| NdeII | GATC | 8 cut(s) | 110, 127, 152, 382, 386, 436, 592, 1343 |
| NlaIII | CATG | 7 cut(s) | 220, 313, 450, 613, 779, 1037, 1209 |
| NlaIV | GGNNCC | 4 cut(s) | 513, 947, 948, 1276 |
| NruI | TCGCGA | 1 cut(s) | 1179 |
| NspI | RCATGY | 1 cut(s) | 1209 |
| OliI | CACNNNNGTG | 1 cut(s) | 1232 |
| PasI | CCCWGGG | 1 cut(s) | 950 |
| PctI | GAATGC | 2 cut(s) | 1009, 1264 |
| PfeI | GAWTC | 1 cut(s) | 868 |
| PflFI | GACNNNGTC | 1 cut(s) | 1160 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 642 |
| PkrI | GCNGC | 5 cut(s) | 608, 630, 1140, 1204, 1394 |
| PleI | GAGTC | 3 cut(s) | 307, 912, 1045 |
| PpsI | GAGTC | 3 cut(s) | 307, 912, 1045 |
| PpuMI | RGGWCCY | 2 cut(s) | 755, 946 |
| Psp5II | RGGWCCY | 2 cut(s) | 755, 946 |
| Psp6I | CCWGG | 4 cut(s) | 349, 371, 949, 1027 |
| PspGI | CCWGG | 4 cut(s) | 349, 371, 949, 1027 |
| PspN4I | GGNNCC | 4 cut(s) | 513, 947, 948, 1276 |
| PspPI | GGNCC | 2 cut(s) | 755, 946 |
| PspPPI | RGGWCCY | 2 cut(s) | 755, 946 |
| PsuI | RGATCY | 1 cut(s) | 436 |
| PsyI | GACNNNGTC | 1 cut(s) | 1160 |
| PvuII | CAGCTG | 1 cut(s) | 1395 |
| RruI | TCGCGA | 1 cut(s) | 1179 |
| RsaI | GTAC | 4 cut(s) | 92, 842, 881, 1082 |
| RsaNI | GTAC | 4 cut(s) | 91, 841, 880, 1081 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1232 |
| SaqAI | TTAA | 2 cut(s) | 134, 561 |
| SatI | GCNGC | 5 cut(s) | 607, 629, 1139, 1203, 1393 |
| Sau3AI | GATC | 8 cut(s) | 110, 127, 152, 382, 386, 436, 592, 1343 |
| Sau96I | GGNCC | 2 cut(s) | 755, 946 |
| ScaI | AGTACT | 1 cut(s) | 92 |
| SchI | GAGTC | 3 cut(s) | 307, 913, 1046 |
| ScrFI | CCNGG | 5 cut(s) | 351, 373, 762, 951, 1029 |
| SduI | GDGCHC | 4 cut(s) | 767, 1014, 1189, 1229 |
| SfaNI | GCATC | 1 cut(s) | 73 |
| SinI | GGWCC | 2 cut(s) | 755, 946 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1232 |
| SmlI | CTYRAG | 1 cut(s) | 53 |
| SmoI | CTYRAG | 1 cut(s) | 53 |
| Sse9I | AATT | 7 cut(s) | 184, 566, 654, 672, 874, 940, 1283 |
| SsiI | CCGC | 4 cut(s) | 12, 607, 1139, 1278 |
| SspI | AATATT | 1 cut(s) | 1195 |
| SspMI | CTAG | 4 cut(s) | 99, 504, 911, 1389 |
| StyD4I | CCNGG | 5 cut(s) | 349, 371, 760, 949, 1027 |
| StyI | CCWWGG | 1 cut(s) | 910 |
| TaaI | ACNGT | 7 cut(s) | 80, 299, 460, 536, 558, 782, 1355 |
| TaiI | ACGT | 1 cut(s) | 1186 |
| TaqI | TCGA | 3 cut(s) | 357, 385, 862 |
| TasI | AATT | 7 cut(s) | 184, 566, 654, 672, 874, 940, 1283 |
| TatI | WGTACW | 3 cut(s) | 90, 840, 1080 |
| TauI | GCSGC | 2 cut(s) | 609, 1141 |
| TfiI | GAWTC | 1 cut(s) | 868 |
| Tru1I | TTAA | 2 cut(s) | 134, 561 |
| Tru9I | TTAA | 2 cut(s) | 134, 561 |
| TscAI | CASTG | 2 cut(s) | 85, 130 |
| TseI | GCWGC | 3 cut(s) | 628, 1202, 1392 |
| TspDTI | ATGAA | 7 cut(s) | 183, 240, 678, 732, 951, 1038, 1325 |
| TspRI | CASTG | 2 cut(s) | 85, 130 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1160 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 642 |
| VneI | GTGCAC | 1 cut(s) | 1185 |
| VpaK11BI | GGWCC | 2 cut(s) | 755, 946 |
| XapI | RAATTY | 4 cut(s) | 566, 654, 672, 874 |
| XceI | RCATGY | 1 cut(s) | 1209 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 421, 639 |
| XmaJI | CCTAGG | 1 cut(s) | 910 |
| XspI | CTAG | 4 cut(s) | 99, 504, 911, 1389 |
| ZrmI | AGTACT | 1 cut(s) | 92 |