Belongs to the ubiquitin-conjugating enzyme family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53023 AT1G53025 AT1G53025 |
| fragaria_vesca | FvH4_6g26220 FvH4_6g26220 FvH4_6g26220 FvH4_6g26220 |
| malus_domestica | MD09G1247000.v1.1 MD17G1240000.v1.1 |
| prunus_persica | Prupe.3G132700_v2.0.a1 |
| pyrus_communis | pycom09g16440 pycom17g24330 |
| rosa_chinensis | RchiOBHm_Chr2g0126571 |
| rosa_laevigata | RLG00000018913 |
| rosa_multiflora | Rmu_sc0002369.1_g000030 Rmu_sc0007463.1_g000009 Rmu_sc0021234.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00117080 |
| rosa_rugosa | Rorug02G0263700 Rorug02G0263800 Rorug02G0263900 |
| rosa_samantha | Rh2AG320900 Rh2BG329200 Rh2CG309000 Rh2DG348500 |
| rosa_wichuraiana | Rw2G025990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 239 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 786 |
| AccBSI | CCGCTC | 1 cut(s) | 1068 |
| AccI | GTMKAC | 4 cut(s) | 583, 1072, 1190, 1268 |
| AciI | CCGC | 3 cut(s) | 71, 186, 1068 |
| AclWI | GGATC | 6 cut(s) | 150, 218, 295, 506, 519, 1501 |
| AcsI | RAATTY | 6 cut(s) | 107, 692, 798, 816, 1018, 1433 |
| AcuI | CTGAAG | 1 cut(s) | 1274 |
| AcvI | CACGTG | 1 cut(s) | 1062 |
| AfaI | GTAC | 4 cut(s) | 660, 917, 1226, 1372 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 94, 578, 786 |
| AgeI | ACCGGT | 1 cut(s) | 87 |
| AgsI | TTSAA | 7 cut(s) | 182, 301, 359, 508, 698, 1165, 1418 |
| AjnI | CCWGG | 7 cut(s) | 226, 478, 500, 904, 1093, 1171, 1217 |
| AluBI | AGCT | 6 cut(s) | 82, 234, 491, 621, 626, 1136 |
| AluI | AGCT | 6 cut(s) | 82, 234, 491, 621, 626, 1136 |
| Alw21I | GWGCWC | 2 cut(s) | 236, 1333 |
| Alw26I | GTCTC | 6 cut(s) | 686, 950, 1049, 1129, 1175, 1254 |
| Alw44I | GTGCAC | 1 cut(s) | 1329 |
| AlwI | GGATC | 6 cut(s) | 150, 218, 295, 506, 519, 1501 |
| AoxI | GGCC | 3 cut(s) | 175, 216, 789 |
| ApaLI | GTGCAC | 1 cut(s) | 1329 |
| ApeKI | GCWGC | 5 cut(s) | 593, 618, 772, 1346, 1523 |
| ApoI | RAATTY | 6 cut(s) | 107, 692, 798, 816, 1018, 1433 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 830, 862 |
| AsiGI | ACCGGT | 1 cut(s) | 87 |
| AspS9I | GGNCC | 3 cut(s) | 217, 789, 899 |
| AsuC2I | CCSGG | 1 cut(s) | 854 |
| AsuHPI | GGTGA | 3 cut(s) | 93, 963, 1474 |
| AvaII | GGWCC | 1 cut(s) | 899 |
| BaeGI | GKGCMC | 1 cut(s) | 1333 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1362, 1395 |
| BamHI | GGATCC | 1 cut(s) | 511 |
| BanII | GRGCYC | 2 cut(s) | 236, 273 |
| BbrPI | CACGTG | 1 cut(s) | 1062 |
| BbsI | GAAGAC | 4 cut(s) | 123, 995, 1262, 1377 |
| Bbv12I | GWGCWC | 2 cut(s) | 236, 1333 |
| BbvI | GCAGC | 4 cut(s) | 605, 630, 784, 1358 |
| BccI | CCATC | 4 cut(s) | 197, 595, 917, 973 |
| BceAI | ACGGC | 1 cut(s) | 84 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 582, 616 |
| BciT130I | CCWGG | 7 cut(s) | 228, 480, 502, 906, 1095, 1173, 1219 |
| BciVI | GTATCC | 1 cut(s) | 1083 |
| BcnI | CCSGG | 1 cut(s) | 854 |
| BcoDI | GTCTC | 6 cut(s) | 686, 950, 1049, 1129, 1175, 1254 |
| BfaI | CTAG | 3 cut(s) | 240, 648, 1452 |
| BfmI | CTRYAG | 2 cut(s) | 591, 745 |
| BfuAI | ACCTGC | 1 cut(s) | 239 |
| BfuI | GTATCC | 1 cut(s) | 1083 |
| BisI | GCNGC | 6 cut(s) | 186, 594, 619, 773, 1347, 1524 |
| BlpI | GCTNAGC | 1 cut(s) | 622 |
| BlsI | GCNGC | 6 cut(s) | 187, 595, 620, 774, 1348, 1525 |
| Bme1390I | CCNGG | 8 cut(s) | 228, 480, 502, 854, 906, 1095, 1173, 1219 |
| Bme18I | GGWCC | 1 cut(s) | 899 |
| BmgT120I | GGNCC | 3 cut(s) | 217, 789, 899 |
| BmiI | GGNNCC | 3 cut(s) | 75, 513, 901 |
| BmrFI | CCNGG | 8 cut(s) | 228, 480, 502, 854, 906, 1095, 1173, 1219 |
| BmsI | GCATC | 2 cut(s) | 553, 1387 |
| BoxI | GACNNNNGTC | 1 cut(s) | 678 |
| BpiI | GAAGAC | 4 cut(s) | 123, 995, 1262, 1377 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 716, 748 |
| BpmI | CTGGAG | 1 cut(s) | 1215 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 622 |
| BpuEI | CTTGAG | 2 cut(s) | 260, 1411 |
| BpuMI | CCSGG | 1 cut(s) | 854 |
| BsaAI | YACGTR | 1 cut(s) | 1062 |
| BsaBI | GATNNNNATC | 1 cut(s) | 417 |
| BsaI | GGTCTC | 1 cut(s) | 1129 |
| BsaJI | CCNNGG | 7 cut(s) | 227, 444, 479, 500, 904, 1094, 1172 |
| BsaWI | WCCGGW | 3 cut(s) | 87, 103, 995 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1386, 1416 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 94, 578, 786 |
| Bse118I | RCCGGY | 2 cut(s) | 87, 596 |
| Bse1I | ACTGG | 3 cut(s) | 583, 1091, 1198 |
| Bse8I | GATNNNNATC | 1 cut(s) | 417 |
| BseBI | CCWGG | 7 cut(s) | 228, 480, 502, 906, 1095, 1173, 1219 |
| BseDI | CCNNGG | 7 cut(s) | 227, 444, 479, 500, 904, 1094, 1172 |
| BseGI | GGATG | 1 cut(s) | 1461 |
| BseJI | GATNNNNATC | 1 cut(s) | 417 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 94, 578, 786 |
| BseMII | CTCAG | 5 cut(s) | 159, 636, 747, 1060, 1356 |
| BseNI | ACTGG | 3 cut(s) | 583, 1091, 1198 |
| BseSI | GKGCMC | 1 cut(s) | 1333 |
| BseXI | GCAGC | 4 cut(s) | 605, 630, 784, 1358 |
| BseYI | CCCAGC | 1 cut(s) | 125 |
| BsgI | GTGCAG | 1 cut(s) | 1424 |
| BshFI | GGCC | 3 cut(s) | 177, 218, 791 |
| BshTI | ACCGGT | 1 cut(s) | 87 |
| BsiHKAI | GWGCWC | 2 cut(s) | 236, 1333 |
| BsiSI | CCGG | 5 cut(s) | 88, 104, 597, 853, 996 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 94, 578, 786 |
| BsmAI | GTCTC | 6 cut(s) | 686, 950, 1049, 1129, 1175, 1254 |
| BsmI | GAATGC | 2 cut(s) | 307, 1153 |
| BsnI | GGCC | 3 cut(s) | 177, 218, 791 |
| Bso31I | GGTCTC | 1 cut(s) | 1129 |
| Bsp1286I | GDGCHC | 3 cut(s) | 236, 273, 1333 |
| Bsp143I | GATC | 7 cut(s) | 142, 223, 287, 364, 511, 736, 1493 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 622 |
| Bsp19I | CCATGG | 1 cut(s) | 444 |
| BspACI | CCGC | 3 cut(s) | 71, 186, 1068 |
| BspANI | GGCC | 3 cut(s) | 177, 218, 791 |
| BspCNI | CTCAG | 5 cut(s) | 160, 635, 746, 1059, 1357 |
| BspLI | GGNNCC | 3 cut(s) | 75, 513, 901 |
| BspMAI | CTGCAG | 1 cut(s) | 595 |
| BspMI | ACCTGC | 1 cut(s) | 239 |
| BspPI | GGATC | 6 cut(s) | 150, 218, 295, 506, 519, 1501 |
| BspTNI | GGTCTC | 1 cut(s) | 1129 |
| BsrBI | CCGCTC | 1 cut(s) | 1068 |
| BsrFI | RCCGGY | 2 cut(s) | 87, 596 |
| BsrI | ACTGG | 3 cut(s) | 583, 1091, 1198 |
| BssAI | RCCGGY | 2 cut(s) | 87, 596 |
| BssECI | CCNNGG | 7 cut(s) | 227, 444, 479, 500, 904, 1094, 1172 |
| BssMI | GATC | 7 cut(s) | 142, 223, 287, 364, 511, 736, 1493 |
| BssNAI | GTATAC | 2 cut(s) | 1191, 1269 |
| BssT1I | CCWWGG | 1 cut(s) | 444 |
| Bst1107I | GTATAC | 2 cut(s) | 1191, 1269 |
| Bst2UI | CCWGG | 7 cut(s) | 228, 480, 502, 906, 1095, 1173, 1219 |
| Bst4CI | ACNGT | 3 cut(s) | 158, 1229, 1505 |
| Bst6I | CTCTTC | 3 cut(s) | 801, 953, 1227 |
| BstBAI | YACGTR | 1 cut(s) | 1062 |
| BstC8I | GCNNGC | 3 cut(s) | 24, 28, 54 |
| BstDEI | CTNAG | 8 cut(s) | 168, 543, 622, 733, 1046, 1274, 1287, 1365 |
| BstDSI | CCRYGG | 1 cut(s) | 444 |
| BstF5I | GGATG | 1 cut(s) | 1461 |
| BstKTI | GATC | 7 cut(s) | 145, 226, 290, 367, 514, 739, 1496 |
| BstMAI | GTCTC | 6 cut(s) | 686, 950, 1049, 1129, 1175, 1254 |
| BstMBI | GATC | 7 cut(s) | 142, 223, 287, 364, 511, 736, 1493 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 191, 1065, 1355 |
| BstNI | CCWGG | 7 cut(s) | 228, 480, 502, 906, 1095, 1173, 1219 |
| BstNSI | RCATGY | 1 cut(s) | 1353 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 678 |
| BstSCI | CCNGG | 8 cut(s) | 226, 478, 500, 852, 904, 1093, 1171, 1217 |
| BstSFI | CTRYAG | 2 cut(s) | 591, 745 |
| BstSLI | GKGCMC | 1 cut(s) | 1333 |
| BstV1I | GCAGC | 4 cut(s) | 605, 630, 784, 1358 |
| BstV2I | GAAGAC | 4 cut(s) | 123, 995, 1262, 1377 |
| BstX2I | RGATCY | 2 cut(s) | 142, 511 |
| BstYI | RGATCY | 2 cut(s) | 142, 511 |
| BstZ17I | GTATAC | 2 cut(s) | 1191, 1269 |
| BsuI | GTATCC | 1 cut(s) | 1083 |
| BsuRI | GGCC | 3 cut(s) | 177, 218, 791 |
| BtgI | CCRYGG | 1 cut(s) | 444 |
| BtgZI | GCGATG | 2 cut(s) | 175, 684 |
| BtsCI | GGATG | 1 cut(s) | 1461 |
| BtsI | GCAGTG | 2 cut(s) | 894, 1407 |
| BtsIMutI | CAGTG | 3 cut(s) | 894, 1234, 1407 |
| BveI | ACCTGC | 1 cut(s) | 239 |
| Cac8I | GCNNGC | 3 cut(s) | 24, 28, 54 |
| Cfr10I | RCCGGY | 2 cut(s) | 87, 596 |
| Cfr13I | GGNCC | 3 cut(s) | 217, 789, 899 |
| Csp6I | GTAC | 4 cut(s) | 659, 916, 1225, 1371 |
| CspAI | ACCGGT | 1 cut(s) | 87 |
| CviAII | CATG | 7 cut(s) | 151, 330, 445, 615, 685, 920, 1350 |
| CviQI | GTAC | 4 cut(s) | 659, 916, 1225, 1371 |
| DdeI | CTNAG | 8 cut(s) | 168, 543, 622, 733, 1046, 1274, 1287, 1365 |
| DpnI | GATC | 7 cut(s) | 144, 225, 289, 366, 513, 738, 1495 |
| DpnII | GATC | 7 cut(s) | 142, 223, 287, 364, 511, 736, 1493 |
| Eam1104I | CTCTTC | 3 cut(s) | 801, 953, 1227 |
| EarI | CTCTTC | 3 cut(s) | 801, 953, 1227 |
| EciI | GGCGGA | 1 cut(s) | 86 |
| Ecl136II | GAGCTC | 1 cut(s) | 234 |
| Eco130I | CCWWGG | 1 cut(s) | 444 |
| Eco147I | AGGCCT | 1 cut(s) | 177 |
| Eco24I | GRGCYC | 2 cut(s) | 236, 273 |
| Eco31I | GGTCTC | 1 cut(s) | 1129 |
| Eco47I | GGWCC | 1 cut(s) | 899 |
| Eco53kI | GAGCTC | 1 cut(s) | 234 |
| Eco57I | CTGAAG | 1 cut(s) | 1274 |
| Eco72I | CACGTG | 1 cut(s) | 1062 |
| EcoICRI | GAGCTC | 1 cut(s) | 234 |
| EcoO109I | RGGNCCY | 1 cut(s) | 899 |
| EcoRI | GAATTC | 1 cut(s) | 798 |
| EcoRII | CCWGG | 7 cut(s) | 226, 478, 500, 904, 1093, 1171, 1217 |
| EcoT14I | CCWWGG | 1 cut(s) | 444 |
| EcoT38I | GRGCYC | 2 cut(s) | 236, 273 |
| ErhI | CCWWGG | 1 cut(s) | 444 |
| FaeI | CATG | 7 cut(s) | 154, 333, 448, 618, 688, 923, 1353 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 480, 512 |
| FatI | CATG | 7 cut(s) | 150, 329, 444, 614, 684, 919, 1349 |
| FblI | GTMKAC | 4 cut(s) | 583, 1072, 1190, 1268 |
| Fnu4HI | GCNGC | 6 cut(s) | 186, 594, 619, 773, 1347, 1524 |
| FokI | GGATG | 1 cut(s) | 1468 |
| FriOI | GRGCYC | 2 cut(s) | 236, 273 |
| Fsp4HI | GCNGC | 6 cut(s) | 186, 594, 619, 773, 1347, 1524 |
| FspBI | CTAG | 3 cut(s) | 240, 648, 1452 |
| GluI | GCNGC | 6 cut(s) | 186, 594, 619, 773, 1347, 1524 |
| GsaI | CCCAGC | 1 cut(s) | 129 |
| GsuI | CTGGAG | 1 cut(s) | 1215 |
| HaeIII | GGCC | 3 cut(s) | 177, 218, 791 |
| HapII | CCGG | 5 cut(s) | 88, 104, 597, 853, 996 |
| Hin1II | CATG | 7 cut(s) | 154, 333, 448, 618, 688, 923, 1353 |
| HincII | GTYRAC | 1 cut(s) | 552 |
| HindII | GTYRAC | 1 cut(s) | 552 |
| HindIII | AAGCTT | 1 cut(s) | 489 |
| HinfI | GANTC | 6 cut(s) | 98, 135, 323, 449, 638, 1100 |
| HpaI | GTTAAC | 1 cut(s) | 552 |
| HpaII | CCGG | 5 cut(s) | 88, 104, 597, 853, 996 |
| HphI | GGTGA | 3 cut(s) | 93, 963, 1474 |
| Hpy166II | GTNNAC | 8 cut(s) | 540, 552, 584, 985, 1073, 1191, 1269, 1331 |
| Hpy188I | TCNGA | 9 cut(s) | 97, 169, 427, 562, 637, 736, 766, 1254, 1366 |
| Hpy188III | TCNNGA | 5 cut(s) | 146, 277, 285, 368, 803 |
| Hpy8I | GTNNAC | 8 cut(s) | 540, 552, 584, 985, 1073, 1191, 1269, 1331 |
| Hpy99I | CGWCG | 3 cut(s) | 61, 386, 389 |
| HpyAV | CCTTC | 6 cut(s) | 188, 502, 525, 642, 820, 1196 |
| HpyCH4III | ACNGT | 3 cut(s) | 158, 1229, 1505 |
| HpyCH4IV | ACGT | 2 cut(s) | 657, 1061 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 191, 1065, 1355 |
| HpyF3I | CTNAG | 8 cut(s) | 168, 543, 622, 733, 1046, 1274, 1287, 1365 |
| HpySE526I | ACGT | 2 cut(s) | 657, 1061 |
| Hsp92II | CATG | 7 cut(s) | 154, 333, 448, 618, 688, 923, 1353 |
| KspAI | GTTAAC | 1 cut(s) | 552 |
| Kzo9I | GATC | 7 cut(s) | 142, 223, 287, 364, 511, 736, 1493 |
| LmnI | GCTCC | 3 cut(s) | 73, 231, 1065 |
| Lsp1109I | GCAGC | 4 cut(s) | 605, 630, 784, 1358 |
| LweI | GCATC | 2 cut(s) | 553, 1387 |
| MaeI | CTAG | 3 cut(s) | 240, 648, 1452 |
| MaeII | ACGT | 2 cut(s) | 657, 1061 |
| MaeIII | GTNAC | 3 cut(s) | 99, 574, 1471 |
| MalI | GATC | 7 cut(s) | 144, 225, 289, 366, 513, 738, 1495 |
| MbiI | CCGCTC | 1 cut(s) | 1068 |
| MboI | GATC | 7 cut(s) | 142, 223, 287, 364, 511, 736, 1493 |
| MboII | GAAGA | 9 cut(s) | 128, 364, 371, 818, 940, 995, 1244, 1267, 1377 |
| MflI | RGATCY | 2 cut(s) | 142, 511 |
| MhlI | GDGCHC | 3 cut(s) | 236, 273, 1333 |
| MlyI | GAGTC | 1 cut(s) | 107 |
| MmeI | TCCRAC | 2 cut(s) | 75, 545 |
| MseI | TTAA | 3 cut(s) | 551, 705, 1437 |
| MspA1I | CMGCKG | 1 cut(s) | 626 |
| MspI | CCGG | 5 cut(s) | 88, 104, 597, 853, 996 |
| MspR9I | CCNGG | 8 cut(s) | 228, 480, 502, 854, 906, 1095, 1173, 1219 |
| Mva1269I | GAATGC | 2 cut(s) | 307, 1153 |
| MvaI | CCWGG | 7 cut(s) | 228, 480, 502, 906, 1095, 1173, 1219 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 191, 1065, 1355 |
| NciI | CCSGG | 1 cut(s) | 854 |
| NcoI | CCATGG | 1 cut(s) | 444 |
| NdeII | GATC | 7 cut(s) | 142, 223, 287, 364, 511, 736, 1493 |
| NlaIII | CATG | 7 cut(s) | 154, 333, 448, 618, 688, 923, 1353 |
| NlaIV | GGNNCC | 3 cut(s) | 75, 513, 901 |
| NmuCI | GTSAC | 1 cut(s) | 99 |
| NspI | RCATGY | 1 cut(s) | 1353 |
| PceI | AGGCCT | 1 cut(s) | 177 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 56, 74, 144 |
| PctI | GAATGC | 2 cut(s) | 307, 1153 |
| PfeI | GAWTC | 5 cut(s) | 135, 323, 449, 638, 1100 |
| PflFI | GACNNNGTC | 1 cut(s) | 1304 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 786 |
| PfoI | TCCNGGA | 1 cut(s) | 1217 |
| PinAI | ACCGGT | 1 cut(s) | 87 |
| PkrI | GCNGC | 6 cut(s) | 187, 595, 620, 774, 1348, 1525 |
| PleI | GAGTC | 1 cut(s) | 106 |
| PmaCI | CACGTG | 1 cut(s) | 1062 |
| PmlI | CACGTG | 1 cut(s) | 1062 |
| PpsI | GAGTC | 1 cut(s) | 106 |
| Ppu21I | YACGTR | 1 cut(s) | 1062 |
| PpuMI | RGGWCCY | 1 cut(s) | 899 |
| PshAI | GACNNNNGTC | 1 cut(s) | 678 |
| Psp124BI | GAGCTC | 1 cut(s) | 236 |
| Psp5II | RGGWCCY | 1 cut(s) | 899 |
| Psp6I | CCWGG | 7 cut(s) | 226, 478, 500, 904, 1093, 1171, 1217 |
| PspCI | CACGTG | 1 cut(s) | 1062 |
| PspFI | CCCAGC | 1 cut(s) | 125 |
| PspGI | CCWGG | 7 cut(s) | 226, 478, 500, 904, 1093, 1171, 1217 |
| PspN4I | GGNNCC | 3 cut(s) | 75, 513, 901 |
| PspPI | GGNCC | 3 cut(s) | 217, 789, 899 |
| PspPPI | RGGWCCY | 1 cut(s) | 899 |
| PstI | CTGCAG | 1 cut(s) | 595 |
| PsuI | RGATCY | 2 cut(s) | 142, 511 |
| PsyI | GACNNNGTC | 1 cut(s) | 1304 |
| PvuII | CAGCTG | 1 cut(s) | 626 |
| RsaI | GTAC | 4 cut(s) | 660, 917, 1226, 1372 |
| RsaNI | GTAC | 4 cut(s) | 659, 916, 1225, 1371 |
| SacI | GAGCTC | 1 cut(s) | 236 |
| SaqAI | TTAA | 3 cut(s) | 551, 705, 1437 |
| SatI | GCNGC | 6 cut(s) | 186, 594, 619, 773, 1347, 1524 |
| Sau3AI | GATC | 7 cut(s) | 142, 223, 287, 364, 511, 736, 1493 |
| Sau96I | GGNCC | 3 cut(s) | 217, 789, 899 |
| SchI | GAGTC | 1 cut(s) | 107 |
| ScrFI | CCNGG | 8 cut(s) | 228, 480, 502, 854, 906, 1095, 1173, 1219 |
| SduI | GDGCHC | 3 cut(s) | 236, 273, 1333 |
| SfaNI | GCATC | 2 cut(s) | 553, 1387 |
| SfcI | CTRYAG | 2 cut(s) | 591, 745 |
| SinI | GGWCC | 1 cut(s) | 899 |
| SmlI | CTYRAG | 2 cut(s) | 275, 1426 |
| SmoI | CTYRAG | 2 cut(s) | 275, 1426 |
| SseBI | AGGCCT | 1 cut(s) | 177 |
| SsiI | CCGC | 3 cut(s) | 71, 186, 1068 |
| SspMI | CTAG | 3 cut(s) | 240, 648, 1452 |
| SstI | GAGCTC | 1 cut(s) | 236 |
| StuI | AGGCCT | 1 cut(s) | 177 |
| StyD4I | CCNGG | 8 cut(s) | 226, 478, 500, 852, 904, 1093, 1171, 1217 |
| StyI | CCWWGG | 1 cut(s) | 444 |
| TaaI | ACNGT | 3 cut(s) | 158, 1229, 1505 |
| TaiI | ACGT | 2 cut(s) | 660, 1064 |
| TaqI | TCGA | 2 cut(s) | 147, 1516 |
| TatI | WGTACW | 1 cut(s) | 1224 |
| TauI | GCSGC | 1 cut(s) | 188 |
| TfiI | GAWTC | 5 cut(s) | 135, 323, 449, 638, 1100 |
| Tru1I | TTAA | 3 cut(s) | 551, 705, 1437 |
| Tru9I | TTAA | 3 cut(s) | 551, 705, 1437 |
| TscAI | CASTG | 3 cut(s) | 894, 1234, 1407 |
| TseFI | GTSAC | 1 cut(s) | 99 |
| TseI | GCWGC | 5 cut(s) | 593, 618, 772, 1346, 1523 |
| Tsp45I | GTSAC | 1 cut(s) | 99 |
| TspDTI | ATGAA | 5 cut(s) | 360, 365, 603, 876, 1475 |
| TspGWI | ACGGA | 2 cut(s) | 151, 903 |
| TspRI | CASTG | 3 cut(s) | 894, 1234, 1407 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1304 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 786 |
| VneI | GTGCAC | 1 cut(s) | 1329 |
| VpaK11BI | GGWCC | 1 cut(s) | 899 |
| XapI | RAATTY | 6 cut(s) | 107, 692, 798, 816, 1018, 1433 |
| XceI | RCATGY | 1 cut(s) | 1353 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 783 |
| XmiI | GTMKAC | 4 cut(s) | 583, 1072, 1190, 1268 |
| XspI | CTAG | 3 cut(s) | 240, 648, 1452 |