Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0004607

Physical Location & Seq

Genomic Coordinates Forward (+)

5238093 .. 5243921

Gene Structure 5829 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2529 bp

ATGACAGACATCTTGCTGGAGATATTAAACTTAAACAAGACAGAGATCATTTCCATTGATATCATCTCAAACCAAGATTTCACTGAGGACGAATGCAAGCGACTGCGTCAGAGCATAAAATGTGGACTTATCAATCGGCTTACTGTGGGTGATGTTCAAGACAAAGCAACAGCGCTCCAAGCAGTCAGAGTCAAAGATTGGTTAGAAACGGAGATAGTGAGACTCAGTCATCTTCGCGATCGAGCTAGTGAAAAAGGGCGCAGAAAGGAGCTTAGAGAGTGTGTAGAGAAGTTGCAGCTTCTAAAGACACCTGAGGAACGCCAGCGTAGACTAGAGGAAACTCCAGAAATACATGCAGATCCAAATATGGACCCGAGTTATGAATCTGAGGAGGAGGAAGACGAAGGAGATGATAAGAGACAAGATAGTTACACTAGATCTACAGGTTCTGCCTTTGGAAGGAAGGGGAGGGATCCAATCTCTCCACGAAGAGGAGGATCTTCTTTTAACGATTCCTGGAGTGGGACAAGGAATTATTCCAATCCGAATCGGGAGTTAAGCAGGAATATGTCGAATAAGGGATTCTACAACAAAGCAGAAAATACAACTGGAGCTGGTGAGATAGTGAACGATTCATGGGGTCAAGGAAGAGACAGAGAAACACTGAAAACAAACCAATGGGAGAAGAAACAAAATATTTCAAGTTTAGAAACAGGTGTTAGGAGTACGCAGTCTATGGTACCATCTGAATCATCTCCTGGTGGTGGCTCGGGAAATTCAGTGGCACATTTCTCCACTGGCATATCGCAATCTACAGCCACCATCAATGATGCAGAAAAAATATGGCATTACAAAGATCCTTCTGGGAAAGTTCAGGGACCATTTTCCATGGCACAGCTGCGCAAATGGAACAGCACTGGCTATTTTCCTGCCAACTTGAGAGCTTGGAAAAACACTGAGAAGGAAGAAGATTCTATCCTGGTAACTGATGTATTGGCCGGAAAGTTCCAGAAAGACCCTTCACCGGTTGACAGTAGTTTTCTAAAGGCCCAAATGGTGCAAGATTCACATCTCACACCTGCACATTCTGGGAAGCCTCAAGGAGGTCTCTTTCAGCGGGGTACAGAAGGCCAAGCTGGAGGAGGAAGTTGGGGGTCTCAAAACGAACTTAATCCTTCCTCAGGCAGGGGTACTCCATCATCAGTGGAGGTCCCCAAGTATTCTTCAGATGGGTGGAGCACAACAAACTTTCCCTCGCCTACTCCATCCCGAACTCCATTAGGTGGGGCAAGGGGTCAAGCTTATGAAAGTAATTGGTCACCCACCCCTGTTCATCCAACTGGCTCTGTCTTGGGTGGCAATGGAGTGCCGCAACCTAGTACAGTAGCTACTCCAGAAAGTGCACTGCGAGTTTCACTTTCTGGAAATGATCGCTCAAGCTCTCTTCATGGCATTAATGCAGCATCCAAGTCTGAAGGTGGTCCAATTCTGGGCTCCACAAATAGTCTTCAAATGCAGAGTCAAGTAAATGCTTCAATGAATCAAGTGCCAGACGTGAAAAATCTTGTTTCAAATCTGCAAAATCTGGTTCAGTCTGTGACTAGTCGTTCACCCGGTGGTGATACTCAAGGATGGGCTTCTGGTTCAGTTCCAAAACAGGAAATGACTGGTTCAGGCCCAGTATCTGGGAGTGAAACTCAACACTGGACAGGTGCTCCATCCCAAAGGATAGAACCAATTAGTGCTACTACTATGCCTGCACAACATCCGGCCCATGGTTACTGGAGTAATGCTCCATCTACCAACAATGCTACCCCGTCTATTAATACAGGAAATGCAGCTGGAAATTTCCCTTCATCAGGCTTCTCTGGTGTTCCCCAGTCTGATCCTTGGAGACCCCAAGTTCCGGCTAATCAATCATACATTCAGCCTCCAGCACTATCACCCCAGTTACCTTGGAGCATGGGTGTTCCAGATAACCAAAGTTCTCTGCCAAGAACGGGGCAAGAGAATCAAAACACAGGTTGGGCGCCAATTGGGGAAGATCCAAACATGGCCTGGGGAGGACAAGTGCCGGCAAATACAAACATGAATTGGGGAGCTCCGGGACAGGGTCCAGGGTGGGCTGGGCCTGGTCAAGGTCCAGTACCTGGAAATGCAGCGCCTAATTGGGTCCAACCTGCTGCTCAAGGACCGCCTGCAAATCCTGGTTGGGCTCCATCTGGTCAAGGGACAGCAGTTGGGAACACCAATCCTGGTTGGAGTGCACAAACTCAGAATGGAGGAGATAGGTTCTCAAATCAAAGGGATCGTGGCCCACATGGCGGAGATTCTGGTTATGGTGGTGGCAAGCCCTGGAATAGGCAGTCGTCATTTGGTGGTGGTGGTGGCGGCGGCGGCGGCGGTGGGGGAGGAGGTTTGTGGAGAACTACTTCAAAAGTGTGCAGGTTCTTTGAGAGTGGTCACTGCAAGAAGGGCGCAGCGTGTGATTATCTGCACCCGACCAGTAAGAATTTTGGGAACACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0010964 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031935 GO:0032259 GO:0032776 GO:0033043 GO:0033044 GO:0034641 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0044728 GO:0046483 GO:0050789 GO:0050794 GO:0051128 GO:0051171 GO:0051252 GO:0060255 GO:0060966 GO:0060968 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:1901360 GO:1902275 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GYF Plus-3 SWIB zf-CCCH

Protein Analysis

843

Amino Acids

89.66

Weight (kDa)

6.73

Isoelectric Point (pI)

54.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NERD_plant	PF25980	61 - 110	3.7e-27	Plant NERD domain
GYF	PF02213	282 - 322	1.4e-14	GYF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004607)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16485 AT2G16485
fragaria_vesca	FvH4_2g10320 FvH4_2g10320 FvH4_2g10320 FvH4_2g10320 FvH4_2g10320 FvH4_2g10320 FvH4_2g10320
malus_domestica	MD00G1040500.v1.1 MD10G1064000.v1.1
prunus_persica	Prupe.8G085700_v2.0.a1
pyrus_communis	pycom05g04690 pycom05g04700 pycom10g04950 pycom10g04960
rosa_chinensis	RchiOBHm_Chr6g0267521
rosa_laevigata	RLG00000013994
rosa_multiflora	Rmu_co8013812.1_g000001 Rmu_co8150174.1_g000001 Rmu_sc0008030.1_g000001 Rmu_sc0012005.1_g000009
rosa_roxburghii	Rroxscaffold_7G00200660
rosa_rugosa	Rorug06G0033200 Rorug06G0033300 Rorug06G0033400
rosa_samantha	Rh6AG154800 Rh6BG155500 Rh6CG150700 Rh6DG140700
rosa_wichuraiana	Rw6G013290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1087
Acc16I	TGCGCA	1 cut(s)	902
Acc36I	ACCTGC	3 cut(s)	1087, 2188, 2436
Acc65I	GGTACC	1 cut(s)	739
AccB1I	GGYRCC	2 cut(s)	739, 2029
AccB7I	CCANNNNNTGG	3 cut(s)	1283, 1685, 2150
AccI	GTMKAC	1 cut(s)	328
AccII	CGCG	1 cut(s)	237
AciI	CCGC	9 cut(s)	1117, 1370, 2195, 2325, 2391, 2394, 2397, 2400, 2403
AclWI	GGATC	8 cut(s)	353, 467, 480, 505, 851, 1880, 2039, 2316
AcoI	YGGCCR	1 cut(s)	996
AcsI	RAATTY	3 cut(s)	775, 1846, 2512
AcuI	CTGAAG	2 cut(s)	1209, 1494
AcyI	GRCGYC	1 cut(s)	2030
AdeI	CACNNNGTG	1 cut(s)	1616
AfaI	GTAC	6 cut(s)	727, 741, 1123, 1192, 1381, 2148
AfeI	AGCGCT	1 cut(s)	174
AgeI	ACCGGT	1 cut(s)	1024
AgsI	TTSAA	6 cut(s)	158, 702, 1511, 1536, 1572, 2436
AhlI	ACTAGT	1 cut(s)	1601
AjiI	CACGTC	1 cut(s)	1555
Alw21I	GWGCWC	5 cut(s)	1241, 1405, 1717, 2104, 2269
Alw26I	GTCTC	6 cut(s)	214, 412, 645, 1112, 1161, 1888
Alw44I	GTGCAC	2 cut(s)	1401, 2265
AlwI	GGATC	8 cut(s)	353, 467, 480, 505, 851, 1880, 2039, 2316
AlwNI	CAGNNNCTG	3 cut(s)	449, 1685, 2150
Ama87I	CYCGRG	2 cut(s)	373, 769
Aor51HI	AGCGCT	1 cut(s)	174
AoxI	GGCC	8 cut(s)	996, 1047, 1129, 1675, 1770, 2055, 2129, 2314
ApaLI	GTGCAC	2 cut(s)	1401, 2265
ApeKI	GCWGC	7 cut(s)	295, 898, 1460, 1838, 2159, 2183, 2480
ApoI	RAATTY	3 cut(s)	775, 1846, 2512
ArsI	GACNNNNNNTTYG	2 cut(s)	1504, 1536
AseI	ATTAAT	2 cut(s)	1455, 1824
AsiGI	ACCGGT	1 cut(s)	1024
Asp700I	GAANNNNTTC	1 cut(s)	2431
Asp718I	GGTACC	1 cut(s)	739
AspLEI	GCGC	6 cut(s)	175, 261, 903, 2032, 2164, 2480
AsuC2I	CCSGG	2 cut(s)	1614, 2106
AsuHPI	GGTGA	7 cut(s)	161, 629, 1014, 1311, 1602, 1631, 1935
AvaI	CYCGRG	2 cut(s)	373, 769
AvaII	GGWCC	8 cut(s)	370, 878, 1210, 1481, 2114, 2141, 2173, 2192
AxyI	CCTNAGG	2 cut(s)	312, 1180
BaeGI	GKGCMC	2 cut(s)	1405, 2269
BamHI	GGATCC	1 cut(s)	472
BanI	GGYRCC	2 cut(s)	739, 2029
BanII	GRGCYC	3 cut(s)	1496, 2104, 2218
BbsI	GAAGAC	2 cut(s)	405, 1499
Bbv12I	GWGCWC	5 cut(s)	1241, 1405, 1717, 2104, 2269
BbvI	GCAGC	7 cut(s)	307, 885, 1472, 1850, 2170, 2171, 2492
BccI	CCATC	9 cut(s)	751, 830, 1204, 1223, 1273, 1626, 1726, 1804, 2227
BcnI	CCSGG	2 cut(s)	1614, 2106
BcoDI	GTCTC	6 cut(s)	214, 412, 645, 1112, 1161, 1888
BcuI	ACTAGT	1 cut(s)	1601
BfaI	CTAG	5 cut(s)	246, 332, 435, 1377, 1602
BfmI	CTRYAG	2 cut(s)	441, 813
BfoI	RGCGCY	3 cut(s)	176, 2033, 2165
BfuAI	ACCTGC	3 cut(s)	1087, 2188, 2436
BglI	GCCNNNNNGGC	1 cut(s)	2322
BglII	AGATCT	1 cut(s)	437
Bme18I	GGWCC	8 cut(s)	370, 878, 1210, 1481, 2114, 2141, 2173, 2192
BmeT110I	CYCGRG	2 cut(s)	373, 769
BmgBI	CACGTC	1 cut(s)	1555
BmrI	ACTGGG	3 cut(s)	1673, 1873, 1942
BmsI	GCATC	2 cut(s)	820, 1472
BmuI	ACTGGG	3 cut(s)	1673, 1873, 1942
BpiI	GAAGAC	2 cut(s)	405, 1499
BplI	GAGNNNNNCTC	4 cut(s)	1681, 1713, 1777, 1809
BpmI	CTGGAG	8 cut(s)	38, 327, 538, 630, 1158, 1377, 1804, 1917
BpuEI	CTTGAG	5 cut(s)	958, 1083, 1420, 1611, 2172
BpuMI	CCSGG	2 cut(s)	1614, 2106
BsaBI	GATNNNNATC	1 cut(s)	1068
BsaHI	GRCGYC	1 cut(s)	2030
BsaI	GGTCTC	3 cut(s)	1112, 1161, 1888
BsaJI	CCNNGG	7 cut(s)	888, 1774, 1889, 1955, 2058, 2117, 2354
BsaWI	WCCGGW	1 cut(s)	1024
BsaXI	ACNNNNNCTCC	6 cut(s)	1699, 1729, 1951, 1981, 2055, 2085
Bse118I	RCCGGY	2 cut(s)	1024, 2074
Bse21I	CCTNAGG	2 cut(s)	312, 1180
Bse3DI	GCAATG	1 cut(s)	1366
Bse8I	GATNNNNATC	1 cut(s)	1068
BseDI	CCNNGG	7 cut(s)	888, 1774, 1889, 1955, 2058, 2117, 2354
BseGI	GGATG	6 cut(s)	1265, 1333, 1463, 1637, 1718, 1765
BseJI	GATNNNNATC	1 cut(s)	1068
BseMI	GCAATG	1 cut(s)	1366
BseMII	CTCAG	7 cut(s)	75, 238, 303, 378, 948, 1194, 2288
BseRI	GAGGAG	6 cut(s)	404, 407, 507, 1155, 2298, 2427
BseSI	GKGCMC	2 cut(s)	1405, 2269
BseXI	GCAGC	7 cut(s)	307, 885, 1472, 1850, 2170, 2171, 2492
BseYI	CCCAGC	1 cut(s)	2126
BsgI	GTGCAG	4 cut(s)	1065, 1743, 2464, 2480
Bsh1236I	CGCG	1 cut(s)	237
Bsh1285I	CGRYCG	1 cut(s)	241
BshFI	GGCC	8 cut(s)	998, 1049, 1131, 1677, 1772, 2057, 2131, 2316
BshNI	GGYRCC	2 cut(s)	739, 2029
BshTI	ACCGGT	1 cut(s)	1024
BsiEI	CGRYCG	1 cut(s)	241
BsiHKAI	GWGCWC	5 cut(s)	1241, 1405, 1717, 2104, 2269
BsiHKCI	CYCGRG	2 cut(s)	373, 769
BsiSI	CCGG	7 cut(s)	999, 1025, 1614, 1769, 1907, 2075, 2105
BslFI	GGGAC	5 cut(s)	538, 891, 1196, 2121, 2245
BsmAI	GTCTC	6 cut(s)	214, 412, 645, 1112, 1161, 1888
BsmFI	GGGAC	5 cut(s)	538, 891, 1196, 2121, 2245
BsmI	GAATGC	1 cut(s)	98
BsnI	GGCC	8 cut(s)	998, 1049, 1131, 1677, 1772, 2057, 2131, 2316
Bso31I	GGTCTC	3 cut(s)	1112, 1161, 1888
BsoBI	CYCGRG	2 cut(s)	373, 769
Bsp1286I	GDGCHC	7 cut(s)	1241, 1405, 1496, 1717, 2104, 2218, 2269
Bsp19I	CCATGG	2 cut(s)	888, 1774
Bsp68I	TCGCGA	1 cut(s)	237
BspACI	CCGC	9 cut(s)	1117, 1370, 2195, 2325, 2391, 2394, 2397, 2400, 2403
BspANI	GGCC	8 cut(s)	998, 1049, 1131, 1677, 1772, 2057, 2131, 2316
BspCNI	CTCAG	7 cut(s)	76, 237, 304, 379, 949, 1193, 2287
BspFNI	CGCG	1 cut(s)	237
BspMI	ACCTGC	3 cut(s)	1087, 2188, 2436
BspPI	GGATC	8 cut(s)	353, 467, 480, 505, 851, 1880, 2039, 2316
BspT107I	GGYRCC	2 cut(s)	739, 2029
BspTNI	GGTCTC	3 cut(s)	1112, 1161, 1888
BsrDI	GCAATG	1 cut(s)	1366
BsrFI	RCCGGY	2 cut(s)	1024, 2074
BssAI	RCCGGY	2 cut(s)	1024, 2074
BssECI	CCNNGG	7 cut(s)	888, 1774, 1889, 1955, 2058, 2117, 2354
BssNI	GRCGYC	1 cut(s)	2030
BssT1I	CCWWGG	4 cut(s)	888, 1774, 1889, 1955
Bst4CI	ACNGT	3 cut(s)	145, 1034, 1384
Bst6I	CTCTTC	3 cut(s)	484, 643, 1449
BstACI	GRCGYC	1 cut(s)	2030
BstC8I	GCNNGC	6 cut(s)	98, 323, 1758, 2076, 2199, 2351
BstDEI	CTNAG	8 cut(s)	84, 224, 272, 312, 387, 957, 1180, 2274
BstDSI	CCRYGG	2 cut(s)	888, 1774
BstEII	GGTNACC	1 cut(s)	1317
BstENI	CCTNNNNNAGG	7 cut(s)	457, 1101, 1179, 1183, 1857, 2136, 2359
BstF5I	GGATG	6 cut(s)	1265, 1333, 1463, 1637, 1718, 1765
BstFNI	CGCG	1 cut(s)	237
BstH2I	RGCGCY	3 cut(s)	176, 2033, 2165
BstHHI	GCGC	6 cut(s)	175, 261, 903, 2032, 2164, 2480
BstMAI	GTCTC	6 cut(s)	214, 412, 645, 1112, 1161, 1888
BstMCI	CGRYCG	1 cut(s)	241
BstMWI	GCNNNNNNNGC	5 cut(s)	179, 2322, 2397, 2400, 2475
BstNSI	RCATGY	1 cut(s)	356
BstPI	GGTNACC	1 cut(s)	1317
BstSFI	CTRYAG	2 cut(s)	441, 813
BstSLI	GKGCMC	2 cut(s)	1405, 2269
BstUI	CGCG	1 cut(s)	237
BstV1I	GCAGC	7 cut(s)	307, 885, 1472, 1850, 2170, 2171, 2492
BstV2I	GAAGAC	2 cut(s)	405, 1499
BstX2I	RGATCY	6 cut(s)	358, 437, 472, 497, 856, 2044
BstYI	RGATCY	6 cut(s)	358, 437, 472, 497, 856, 2044
Bsu36I	CCTNAGG	2 cut(s)	312, 1180
BsuRI	GGCC	8 cut(s)	998, 1049, 1131, 1677, 1772, 2057, 2131, 2316
BtgI	CCRYGG	2 cut(s)	888, 1774
BtrI	CACGTC	1 cut(s)	1555
BtsCI	GGATG	6 cut(s)	1265, 1333, 1463, 1637, 1718, 1765
BtsI	GCAGTG	2 cut(s)	1403, 2464
BtuMI	TCGCGA	1 cut(s)	237
BveI	ACCTGC	3 cut(s)	1087, 2188, 2436
Cac8I	GCNNGC	6 cut(s)	98, 323, 1758, 2076, 2199, 2351
CaiI	CAGNNNCTG	3 cut(s)	449, 1685, 2150
CfoI	GCGC	6 cut(s)	175, 261, 903, 2032, 2164, 2480
Cfr10I	RCCGGY	2 cut(s)	1024, 2074
CseI	GACGC	1 cut(s)	95
Csp6I	GTAC	6 cut(s)	726, 740, 1122, 1191, 1380, 2147
CspAI	ACCGGT	1 cut(s)	1024
CviAII	CATG	9 cut(s)	353, 636, 889, 1448, 1775, 1963, 2053, 2089, 2321
CviQI	GTAC	6 cut(s)	726, 740, 1122, 1191, 1380, 2147
DdeI	CTNAG	8 cut(s)	84, 224, 272, 312, 387, 957, 1180, 2274
DinI	GGCGCC	1 cut(s)	2031
DraIII	CACNNNGTG	1 cut(s)	1616
EaeI	YGGCCR	1 cut(s)	996
Eam1104I	CTCTTC	3 cut(s)	484, 643, 1449
EarI	CTCTTC	3 cut(s)	484, 643, 1449
EciI	GGCGGA	1 cut(s)	2340
Ecl136II	GAGCTC	1 cut(s)	2102
Eco130I	CCWWGG	4 cut(s)	888, 1774, 1889, 1955
Eco24I	GRGCYC	3 cut(s)	1496, 2104, 2218
Eco31I	GGTCTC	3 cut(s)	1112, 1161, 1888
Eco32I	GATATC	1 cut(s)	61
Eco47I	GGWCC	8 cut(s)	370, 878, 1210, 1481, 2114, 2141, 2173, 2192
Eco47III	AGCGCT	1 cut(s)	174
Eco53kI	GAGCTC	1 cut(s)	2102
Eco57I	CTGAAG	2 cut(s)	1209, 1494
Eco81I	CCTNAGG	2 cut(s)	312, 1180
Eco88I	CYCGRG	2 cut(s)	373, 769
Eco91I	GGTNACC	1 cut(s)	1317
EcoICRI	GAGCTC	1 cut(s)	2102
EcoNI	CCTNNNNNAGG	7 cut(s)	457, 1101, 1179, 1183, 1857, 2136, 2359
EcoO109I	RGGNCCY	1 cut(s)	1210
EcoO65I	GGTNACC	1 cut(s)	1317
EcoRV	GATATC	1 cut(s)	61
EcoT14I	CCWWGG	4 cut(s)	888, 1774, 1889, 1955
EcoT38I	GRGCYC	3 cut(s)	1496, 2104, 2218
EgeI	GGCGCC	1 cut(s)	2031
EheI	GGCGCC	1 cut(s)	2031
ErhI	CCWWGG	4 cut(s)	888, 1774, 1889, 1955
FaeI	CATG	9 cut(s)	356, 639, 892, 1451, 1778, 1966, 2056, 2092, 2324
FaqI	GGGAC	5 cut(s)	538, 891, 1196, 2121, 2245
FatI	CATG	9 cut(s)	352, 635, 888, 1447, 1774, 1962, 2052, 2088, 2320
FauI	CCCGC	1 cut(s)	1110
FblI	GTMKAC	1 cut(s)	328
FokI	GGATG	6 cut(s)	1252, 1320, 1450, 1644, 1705, 1752
FriOI	GRGCYC	3 cut(s)	1496, 2104, 2218
FspBI	CTAG	5 cut(s)	246, 332, 435, 1377, 1602
FspI	TGCGCA	1 cut(s)	902
GlaI	GCGC	6 cut(s)	174, 260, 902, 2031, 2163, 2479
GsaI	CCCAGC	1 cut(s)	2130
GsuI	CTGGAG	8 cut(s)	38, 327, 538, 630, 1158, 1377, 1804, 1917
HaeII	RGCGCY	3 cut(s)	176, 2033, 2165
HaeIII	GGCC	8 cut(s)	998, 1049, 1131, 1677, 1772, 2057, 2131, 2316
HapII	CCGG	7 cut(s)	999, 1025, 1614, 1769, 1907, 2075, 2105
HgaI	GACGC	1 cut(s)	95
HhaI	GCGC	6 cut(s)	175, 261, 903, 2032, 2164, 2480
Hin1I	GRCGYC	1 cut(s)	2030
Hin1II	CATG	9 cut(s)	356, 639, 892, 1451, 1778, 1966, 2056, 2092, 2324
Hin6I	GCGC	6 cut(s)	173, 259, 901, 2030, 2162, 2478
HinP1I	GCGC	6 cut(s)	173, 259, 901, 2030, 2162, 2478
HincII	GTYRAC	1 cut(s)	1030
HindII	GTYRAC	1 cut(s)	1030
HindIII	AAGCTT	1 cut(s)	1299
HpaII	CCGG	7 cut(s)	999, 1025, 1614, 1769, 1907, 2075, 2105
HphI	GGTGA	7 cut(s)	161, 629, 1014, 1311, 1602, 1631, 1935
Hpy166II	GTNNAC	7 cut(s)	125, 329, 628, 1030, 1403, 1610, 2267
Hpy188I	TCNGA	9 cut(s)	111, 188, 388, 546, 748, 1228, 1474, 1885, 2277
Hpy8I	GTNNAC	7 cut(s)	125, 329, 628, 1030, 1403, 1610, 2267
HpyCH4III	ACNGT	3 cut(s)	145, 1034, 1384
HpyCH4IV	ACGT	1 cut(s)	1554
HpyF10VI	GCNNNNNNNGC	5 cut(s)	179, 2322, 2397, 2400, 2475
HpyF3I	CTNAG	8 cut(s)	84, 224, 272, 312, 387, 957, 1180, 2274
HpySE526I	ACGT	1 cut(s)	1554
Hsp92I	GRCGYC	1 cut(s)	2030
Hsp92II	CATG	9 cut(s)	356, 639, 892, 1451, 1778, 1966, 2056, 2092, 2324
HspAI	GCGC	6 cut(s)	173, 259, 901, 2030, 2162, 2478
KasI	GGCGCC	1 cut(s)	2029
KpnI	GGTACC	1 cut(s)	743
KroI	GCCGGC	1 cut(s)	2074
KroNI	GCCGGC	1 cut(s)	2076
Lsp1109I	GCAGC	7 cut(s)	307, 885, 1472, 1850, 2170, 2171, 2492
LweI	GCATC	2 cut(s)	820, 1472
MaeI	CTAG	5 cut(s)	246, 332, 435, 1377, 1602
MaeII	ACGT	1 cut(s)	1554
MaeIII	GTNAC	7 cut(s)	428, 982, 1317, 1597, 1778, 1950, 2462
MfeI	CAATTG	1 cut(s)	2034
MflI	RGATCY	6 cut(s)	358, 437, 472, 497, 856, 2044
MhlI	GDGCHC	7 cut(s)	1241, 1405, 1496, 1717, 2104, 2218, 2269
Mly113I	GGCGCC	1 cut(s)	2030
MlyI	GAGTC	3 cut(s)	198, 216, 1528
MmeI	TCCRAC	3 cut(s)	1361, 2200, 2240
MroNI	GCCGGC	1 cut(s)	2074
MroXI	GAANNNNTTC	1 cut(s)	2431
MseI	TTAA	7 cut(s)	26, 32, 507, 557, 1170, 1455, 1824
MspA1I	CMGCKG	3 cut(s)	898, 1117, 1841
MspI	CCGG	7 cut(s)	999, 1025, 1614, 1769, 1907, 2075, 2105
MunI	CAATTG	1 cut(s)	2034
Mva1269I	GAATGC	1 cut(s)	98
MvnI	CGCG	1 cut(s)	237
MwoI	GCNNNNNNNGC	5 cut(s)	179, 2322, 2397, 2400, 2475
NaeI	GCCGGC	1 cut(s)	2076
NarI	GGCGCC	1 cut(s)	2030
NciI	CCSGG	2 cut(s)	1614, 2106
NcoI	CCATGG	2 cut(s)	888, 1774
NgoMIV	GCCGGC	1 cut(s)	2074
NlaIII	CATG	9 cut(s)	356, 639, 892, 1451, 1778, 1966, 2056, 2092, 2324
NmuCI	GTSAC	3 cut(s)	1317, 1597, 2462
NruI	TCGCGA	1 cut(s)	237
NsbI	TGCGCA	1 cut(s)	902
NspI	RCATGY	1 cut(s)	356
PaqCI	CACCTGC	1 cut(s)	1087
PctI	GAATGC	1 cut(s)	98
PdiI	GCCGGC	1 cut(s)	2076
PdmI	GAANNNNTTC	1 cut(s)	2431
PflFI	GACNNNGTC	3 cut(s)	105, 225, 2112
PflMI	CCANNNNNTGG	3 cut(s)	1283, 1685, 2150
PfoI	TCCNGGA	2 cut(s)	515, 2104
PinAI	ACCGGT	1 cut(s)	1024
Ple19I	CGATCG	1 cut(s)	241
PleI	GAGTC	3 cut(s)	197, 216, 1527
PluTI	GGCGCC	1 cut(s)	2033
PpsI	GAGTC	3 cut(s)	197, 216, 1527
PpuMI	RGGWCCY	1 cut(s)	1210
PshBI	ATTAAT	2 cut(s)	1455, 1824
Psp124BI	GAGCTC	1 cut(s)	2104
Psp5II	RGGWCCY	1 cut(s)	1210
PspEI	GGTNACC	1 cut(s)	1317
PspFI	CCCAGC	1 cut(s)	2126
PspPPI	RGGWCCY	1 cut(s)	1210
PstNI	CAGNNNCTG	3 cut(s)	449, 1685, 2150
PsuI	RGATCY	6 cut(s)	358, 437, 472, 497, 856, 2044
PsyI	GACNNNGTC	3 cut(s)	105, 225, 2112
PvuI	CGATCG	1 cut(s)	241
PvuII	CAGCTG	2 cut(s)	898, 1841
RruI	TCGCGA	1 cut(s)	237
RsaI	GTAC	6 cut(s)	727, 741, 1123, 1192, 1381, 2148
RsaNI	GTAC	6 cut(s)	726, 740, 1122, 1191, 1380, 2147
SacI	GAGCTC	1 cut(s)	2104
SaqAI	TTAA	7 cut(s)	26, 32, 507, 557, 1170, 1455, 1824
SchI	GAGTC	3 cut(s)	198, 216, 1528
SduI	GDGCHC	7 cut(s)	1241, 1405, 1496, 1717, 2104, 2218, 2269
SfaNI	GCATC	2 cut(s)	820, 1472
SfcI	CTRYAG	2 cut(s)	441, 813
SfoI	GGCGCC	1 cut(s)	2031
SinI	GGWCC	8 cut(s)	370, 878, 1210, 1481, 2114, 2141, 2173, 2192
SmlI	CTYRAG	5 cut(s)	937, 1098, 1435, 1626, 2187
SmoI	CTYRAG	5 cut(s)	937, 1098, 1435, 1626, 2187
SpeI	ACTAGT	1 cut(s)	1601
SsiI	CCGC	9 cut(s)	1117, 1370, 2195, 2325, 2391, 2394, 2397, 2400, 2403
SspDI	GGCGCC	1 cut(s)	2029
SspI	AATATT	1 cut(s)	697
SspMI	CTAG	5 cut(s)	246, 332, 435, 1377, 1602
SstI	GAGCTC	1 cut(s)	2104
StyI	CCWWGG	4 cut(s)	888, 1774, 1889, 1955
TaaI	ACNGT	3 cut(s)	145, 1034, 1384
TaiI	ACGT	1 cut(s)	1557
TaqI	TCGA	2 cut(s)	241, 572
TatI	WGTACW	1 cut(s)	1379
TauI	GCSGC	5 cut(s)	1372, 2394, 2397, 2400, 2403
Tru1I	TTAA	7 cut(s)	26, 32, 507, 557, 1170, 1455, 1824
Tru9I	TTAA	7 cut(s)	26, 32, 507, 557, 1170, 1455, 1824
TseFI	GTSAC	3 cut(s)	1317, 1597, 2462
TseI	GCWGC	7 cut(s)	295, 898, 1460, 1838, 2159, 2183, 2480
Tsp45I	GTSAC	3 cut(s)	1317, 1597, 2462
TspDTI	ATGAA	8 cut(s)	396, 624, 1320, 1322, 1436, 1553, 1845, 2105
TspGWI	ACGGA	1 cut(s)	224
Tth111I	GACNNNGTC	3 cut(s)	105, 225, 2112
Van91I	CCANNNNNTGG	3 cut(s)	1283, 1685, 2150
VneI	GTGCAC	2 cut(s)	1401, 2265
VpaK11BI	GGWCC	8 cut(s)	370, 878, 1210, 1481, 2114, 2141, 2173, 2192
VspI	ATTAAT	2 cut(s)	1455, 1824
XagI	CCTNNNNNAGG	7 cut(s)	457, 1101, 1179, 1183, 1857, 2136, 2359
XapI	RAATTY	3 cut(s)	775, 1846, 2512
XceI	RCATGY	1 cut(s)	356
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2055
XmiI	GTMKAC	1 cut(s)	328
XmnI	GAANNNNTTC	1 cut(s)	2431
XspI	CTAG	5 cut(s)	246, 332, 435, 1377, 1602

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.