pycom10g06010

Belongs to the CAP family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
6771801 .. 6774679
2879 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g06010.7

Sequence Viewer

Length: 1245 bp
ATGAGAATGTCGAGTGCCTACCGAGTCTTTCTAACTCGGAGTGTGGAAGAGAGAGTGCGGTTGAGGTTTGTGGCTATGGAGGAGAAGCTGATACAGAGGCTGGAATCGGCTGTGTCGCGCTTAGAGGCGCTGTCGCTGTCCGGTGGTGGAGGGTCGGCGACAGCCCGGGGTTTCGAGGATGCGCCGCTGGATCCGTCGATTGTGGCTTATGAGGATCTGATTGGGCAGTACCTGGGTAGGGTTTCGGCCGCAGCTGAGAAGATTGGGGGGCAGGTGCTGGACATCACCAAGGTTCTCCAGCAAGCTTTTTCTACTCAGAAGGACCTGCTTATCCAGGTTAAGCAAACTCAGAAACCTGACAATACAGGGTTAGCTGAGTTTCTGAAACCACTGAATGAAGCCATCACAAAGGCAAATTCTTTGACAGAAGGGAGGCGGTCTGATTTTTTTAATCACTTGAAGACTGCTGCTGACAGTCTCTCAGCTTTGGCATGGATTGCATATACAGGGAAGGAATGTGGTATGAGCATGCCTATTGCACACGTCGAAGAAAGTTGGCAGATGGCTGAATTCTACTGCAACAAGATTCTTGTGGAGTATAAAACCAAAGACCCAAATCATTTAGAGTGGGCCAAAGCTCTCAAGGAACTGTATTTGCCTGGTTTAAGAGATTATGTTAAGAGTTTCTATCCGTTGGGTCCAGTTTGGAGTTCAACCGGAAAAGCTGTAACTGCTGCTTCTTCAAAACCAAAAGCTCCTGCACCAGGTGCCCCTGCTCCTCCACCTCCTCCATCAGCATCACTCTTTAGCTCCGAAACTTCACAGGCTTCATCATCTCGCCCCAAAGAAGGGATGGCAGCTGTTTTCCAAGAGATTAATTCTGGAAAGCCTGTGACTTCAGGTCTGAGAAAGGTGACAGCTGATATGAAGACAAAGAATCGTGCTGACAGAAGTGGCGTTGTTGGTACCCATGAGAAGGAAAGTCGTACGAGTTCACCTGCTGTTGCTAAAGTAGGACCACCAAAGTTTGAGCTCCAGATGGGTCGCAAGTGGGTTGTTGAGAATCAGATTGCGAAGAAAGATTTGGTTATTAGTGAATGTGATTCAAAACAGTCTGTATATATTTTTGGGTGCAAAGATTCTGTTCTTCAAATTCAAGGGAAAGTAAACAACATTACCATTGACAAATGCGCTAACATGGGAGTCCTGTTTACGGATGTTGTGGCTGCTTGTGATCGATCGTAA

Protein Analysis

415

Amino Acids

45.08

Weight (kDa)

9.08

Isoelectric Point (pI)

47.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 262, 1006
Acc36I ACCTGC 3 cut(s) 262, 333, 1006
Acc65I GGTACC 1 cut(s) 965
AccB1I GGYRCC 2 cut(s) 767, 965
AccII CGCG 1 cut(s) 118
AciI CCGC 4 cut(s) 58, 185, 249, 436
AclWI GGATC 3 cut(s) 185, 198, 222
AcoI YGGCCR 1 cut(s) 246
AcsI RAATTY 3 cut(s) 415, 569, 1152
AcuI CTGAAG 1 cut(s) 882
AdeI CACNNNGTG 1 cut(s) 767
AfaI GTAC 3 cut(s) 230, 967, 988
AfiI CCNNNNNNNGG 6 cut(s) 238, 764, 848, 849, 976, 1213
AflIII ACRYGT 1 cut(s) 541
AgsI TTSAA 6 cut(s) 460, 714, 744, 1107, 1151, 1157
AhdI GACNNNNNGTC 1 cut(s) 900
AjiI CACGTC 1 cut(s) 544
AjnI CCWGG 4 cut(s) 231, 333, 658, 763
AjuI GAANNNNNNNTTGG 2 cut(s) 1067, 1099
Alw21I GWGCWC 1 cut(s) 1035
Alw26I GTCTC 1 cut(s) 482
AlwI GGATC 3 cut(s) 185, 198, 222
AlwNI CAGNNNCTG 3 cut(s) 100, 232, 277
Ama87I CYCGRG 1 cut(s) 165
AoxI GGCC 2 cut(s) 246, 630
ApeKI GCWGC 5 cut(s) 251, 467, 734, 857, 1226
ApoI RAATTY 3 cut(s) 415, 569, 1152
AseI ATTAAT 1 cut(s) 876
Asp718I GGTACC 1 cut(s) 965
AspLEI GCGC 4 cut(s) 120, 130, 184, 1193
AspS9I GGNCC 4 cut(s) 322, 630, 698, 1016
AsuC2I CCSGG 2 cut(s) 166, 167
AsuHPI GGTGA 3 cut(s) 277, 925, 987
AvaI CYCGRG 1 cut(s) 165
AvaII GGWCC 3 cut(s) 322, 698, 1016
BaeGI GKGCMC 1 cut(s) 772
BamHI GGATCC 1 cut(s) 190
BanI GGYRCC 2 cut(s) 767, 965
BanII GRGCYC 1 cut(s) 1035
BbsI GAAGAC 2 cut(s) 467, 935
Bbv12I GWGCWC 1 cut(s) 1035
BbvI GCAGC 5 cut(s) 263, 454, 721, 869, 1213
BccI CCATC 5 cut(s) 410, 556, 799, 847, 1033
BciT130I CCWGG 4 cut(s) 233, 335, 660, 765
BcnI CCSGG 2 cut(s) 166, 167
BcoDI GTCTC 1 cut(s) 482
BfoI RGCGCY 1 cut(s) 131
BfuAI ACCTGC 3 cut(s) 262, 333, 1006
BisI GCNGC 7 cut(s) 185, 249, 252, 468, 735, 858, 1227
BlsI GCNGC 7 cut(s) 186, 250, 253, 469, 736, 859, 1228
Bme1390I CCNGG 6 cut(s) 166, 167, 233, 335, 660, 765
Bme18I GGWCC 3 cut(s) 322, 698, 1016
BmeRI GACNNNNNGTC 1 cut(s) 900
BmeT110I CYCGRG 1 cut(s) 165
BmgBI CACGTC 1 cut(s) 544
BmgT120I GGNCC 4 cut(s) 322, 630, 698, 1016
BmiI GGNNCC 4 cut(s) 192, 699, 769, 967
BmrFI CCNGG 6 cut(s) 166, 167, 233, 335, 660, 765
BmsI GCATC 2 cut(s) 169, 806
BpiI GAAGAC 2 cut(s) 467, 935
BpmI CTGGAG 2 cut(s) 281, 1019
BpuEI CTTGAG 1 cut(s) 626
BpuMI CCSGG 2 cut(s) 166, 167
Bsa29I ATCGAT 1 cut(s) 1237
BsaJI CCNNGG 4 cut(s) 165, 166, 232, 288
BsaWI WCCGGW 2 cut(s) 140, 716
Bsc4I CCNNNNNNNGG 6 cut(s) 238, 764, 848, 849, 976, 1213
Bse1I ACTGG 1 cut(s) 701
BseBI CCWGG 4 cut(s) 233, 335, 660, 765
BseCI ATCGAT 1 cut(s) 1237
BseDI CCNNGG 4 cut(s) 165, 166, 232, 288
BseGI GGATG 3 cut(s) 184, 858, 1222
BseLI CCNNNNNNNGG 6 cut(s) 238, 764, 848, 849, 976, 1213
BseMII CTCAG 6 cut(s) 246, 329, 362, 366, 495, 896
BseNI ACTGG 1 cut(s) 701
BseRI GAGGAG 3 cut(s) 95, 768, 777
BseSI GKGCMC 1 cut(s) 772
BseX3I CGGCCG 1 cut(s) 246
BseXI GCAGC 5 cut(s) 263, 454, 721, 869, 1213
BsgI GTGCAG 1 cut(s) 744
Bsh1236I CGCG 1 cut(s) 118
Bsh1285I CGRYCG 2 cut(s) 249, 1241
BshFI GGCC 2 cut(s) 248, 632
BshNI GGYRCC 2 cut(s) 767, 965
BshVI ATCGAT 1 cut(s) 1237
BsiEI CGRYCG 2 cut(s) 249, 1241
BsiHKAI GWGCWC 1 cut(s) 1035
BsiHKCI CYCGRG 1 cut(s) 165
BsiSI CCGG 3 cut(s) 141, 166, 717
BsiWI CGTACG 1 cut(s) 986
BslI CCNNNNNNNGG 6 cut(s) 238, 764, 848, 849, 976, 1213
BsmAI GTCTC 1 cut(s) 482
BsnI GGCC 2 cut(s) 248, 632
BsoBI CYCGRG 1 cut(s) 165
Bsp1286I GDGCHC 2 cut(s) 772, 1035
Bsp143I GATC 4 cut(s) 190, 214, 1234, 1238
BspACI CCGC 4 cut(s) 58, 185, 249, 436
BspANI GGCC 2 cut(s) 248, 632
BspCNI CTCAG 6 cut(s) 247, 328, 361, 367, 494, 897
BspDI ATCGAT 1 cut(s) 1237
BspFNI CGCG 1 cut(s) 118
BspLI GGNNCC 4 cut(s) 192, 699, 769, 967
BspMI ACCTGC 3 cut(s) 262, 333, 1006
BspPI GGATC 3 cut(s) 185, 198, 222
BspT107I GGYRCC 2 cut(s) 767, 965
BsrI ACTGG 1 cut(s) 701
BssECI CCNNGG 4 cut(s) 165, 166, 232, 288
BssMI GATC 4 cut(s) 190, 214, 1234, 1238
BssT1I CCWWGG 1 cut(s) 288
Bst2UI CCWGG 4 cut(s) 233, 335, 660, 765
Bst4CI ACNGT 3 cut(s) 476, 651, 1113
Bst6I CTCTTC 1 cut(s) 42
BstAPI GCANNNNNTGC 2 cut(s) 497, 767
BstC8I GCNNGC 2 cut(s) 303, 530
BstDEI CTNAG 7 cut(s) 121, 255, 315, 348, 375, 481, 905
BstENI CCTNNNNNAGG 1 cut(s) 762
BstF5I GGATG 3 cut(s) 184, 858, 1222
BstFNI CGCG 1 cut(s) 118
BstH2I RGCGCY 1 cut(s) 131
BstHHI GCGC 4 cut(s) 120, 130, 184, 1193
BstKTI GATC 4 cut(s) 193, 217, 1237, 1241
BstMAI GTCTC 1 cut(s) 482
BstMBI GATC 4 cut(s) 190, 214, 1234, 1238
BstMCI CGRYCG 2 cut(s) 249, 1241
BstMWI GCNNNNNNNGC 3 cut(s) 497, 731, 767
BstNI CCWGG 4 cut(s) 233, 335, 660, 765
BstNSI RCATGY 1 cut(s) 532
BstSCI CCNGG 6 cut(s) 164, 165, 231, 333, 658, 763
BstSLI GKGCMC 1 cut(s) 772
BstUI CGCG 1 cut(s) 118
BstV1I GCAGC 5 cut(s) 263, 454, 721, 869, 1213
BstV2I GAAGAC 2 cut(s) 467, 935
BstX2I RGATCY 2 cut(s) 190, 214
BstYI RGATCY 2 cut(s) 190, 214
BstZI CGGCCG 1 cut(s) 246
Bsu15I ATCGAT 1 cut(s) 1237
BsuRI GGCC 2 cut(s) 248, 632
BsuTUI ATCGAT 1 cut(s) 1237
BtrI CACGTC 1 cut(s) 544
BtsCI GGATG 3 cut(s) 184, 858, 1222
BtsIMutI CAGTG 1 cut(s) 389
BveI ACCTGC 3 cut(s) 262, 333, 1006
Cac8I GCNNGC 2 cut(s) 303, 530
CaiI CAGNNNCTG 3 cut(s) 100, 232, 277
CfoI GCGC 4 cut(s) 120, 130, 184, 1193
Cfr13I GGNCC 4 cut(s) 322, 630, 698, 1016
Cfr9I CCCGGG 1 cut(s) 165
ClaI ATCGAT 1 cut(s) 1237
CsiI ACCWGGT 1 cut(s) 763
Csp6I GTAC 3 cut(s) 229, 966, 987
CviAII CATG 4 cut(s) 492, 529, 971, 1198
CviQI GTAC 3 cut(s) 229, 966, 987
DdeI CTNAG 7 cut(s) 121, 255, 315, 348, 375, 481, 905
DpnI GATC 4 cut(s) 192, 216, 1236, 1240
DpnII GATC 4 cut(s) 190, 214, 1234, 1238
DraIII CACNNNGTG 1 cut(s) 767
DriI GACNNNNNGTC 1 cut(s) 900
EaeI YGGCCR 1 cut(s) 246
EagI CGGCCG 1 cut(s) 246
Eam1104I CTCTTC 1 cut(s) 42
Eam1105I GACNNNNNGTC 1 cut(s) 900
EarI CTCTTC 1 cut(s) 42
Ecl136II GAGCTC 1 cut(s) 1033
EclXI CGGCCG 1 cut(s) 246
Eco130I CCWWGG 1 cut(s) 288
Eco24I GRGCYC 1 cut(s) 1035
Eco47I GGWCC 3 cut(s) 322, 698, 1016
Eco52I CGGCCG 1 cut(s) 246
Eco53kI GAGCTC 1 cut(s) 1033
Eco57I CTGAAG 1 cut(s) 882
Eco88I CYCGRG 1 cut(s) 165
EcoICRI GAGCTC 1 cut(s) 1033
EcoNI CCTNNNNNAGG 1 cut(s) 762
EcoO109I RGGNCCY 1 cut(s) 322
EcoRI GAATTC 1 cut(s) 569
EcoRII CCWGG 4 cut(s) 231, 333, 658, 763
EcoT14I CCWWGG 1 cut(s) 288
EcoT38I GRGCYC 1 cut(s) 1035
ErhI CCWWGG 1 cut(s) 288
FaeI CATG 4 cut(s) 495, 532, 974, 1201
FatI CATG 4 cut(s) 491, 528, 970, 1197
Fnu4HI GCNGC 7 cut(s) 185, 249, 252, 468, 735, 858, 1227
FokI GGATG 3 cut(s) 191, 865, 1229
FriOI GRGCYC 1 cut(s) 1035
Fsp4HI GCNGC 7 cut(s) 185, 249, 252, 468, 735, 858, 1227
GlaI GCGC 4 cut(s) 119, 129, 183, 1192
GluI GCNGC 7 cut(s) 185, 249, 252, 468, 735, 858, 1227
GsuI CTGGAG 2 cut(s) 281, 1019
HaeII RGCGCY 1 cut(s) 131
HaeIII GGCC 2 cut(s) 248, 632
HapII CCGG 3 cut(s) 141, 166, 717
HhaI GCGC 4 cut(s) 120, 130, 184, 1193
Hin1II CATG 4 cut(s) 495, 532, 974, 1201
Hin6I GCGC 4 cut(s) 118, 128, 182, 1191
HinP1I GCGC 4 cut(s) 118, 128, 182, 1191
HindIII AAGCTT 1 cut(s) 303
HinfI GANTC 8 cut(s) 24, 104, 586, 937, 1063, 1103, 1139, 1203
HpaII CCGG 3 cut(s) 141, 166, 717
HphI GGTGA 3 cut(s) 277, 925, 987
Hpy166II GTNNAC 3 cut(s) 995, 1168, 1212
Hpy188I TCNGA 9 cut(s) 39, 219, 318, 351, 384, 442, 814, 906, 1068
Hpy188III TCNNGA 2 cut(s) 882, 1036
Hpy8I GTNNAC 3 cut(s) 995, 1168, 1212
Hpy99I CGWCG 2 cut(s) 199, 548
HpyAV CCTTC 5 cut(s) 313, 422, 505, 842, 970
HpyCH4III ACNGT 3 cut(s) 476, 651, 1113
HpyCH4IV ACGT 1 cut(s) 543
HpyCH4V TGCA 5 cut(s) 500, 539, 579, 761, 1134
HpyF10VI GCNNNNNNNGC 3 cut(s) 497, 731, 767
HpyF3I CTNAG 7 cut(s) 121, 255, 315, 348, 375, 481, 905
HpySE526I ACGT 1 cut(s) 543
Hsp92II CATG 4 cut(s) 495, 532, 974, 1201
HspAI GCGC 4 cut(s) 118, 128, 182, 1191
KpnI GGTACC 1 cut(s) 969
Kzo9I GATC 4 cut(s) 190, 214, 1234, 1238
LmnI GCTCC 4 cut(s) 760, 781, 815, 1038
Lsp1109I GCAGC 5 cut(s) 263, 454, 721, 869, 1213
LweI GCATC 2 cut(s) 169, 806
MabI ACCWGGT 1 cut(s) 763
MaeII ACGT 1 cut(s) 543
MaeIII GTNAC 3 cut(s) 727, 892, 913
MalI GATC 4 cut(s) 192, 216, 1236, 1240
MboI GATC 4 cut(s) 190, 214, 1234, 1238
MboII GAAGA 8 cut(s) 59, 271, 472, 560, 732, 940, 1087, 1139
MflI RGATCY 2 cut(s) 190, 214
MhlI GDGCHC 2 cut(s) 772, 1035
MluCI AATT 4 cut(s) 415, 569, 877, 1152
MlyI GAGTC 2 cut(s) 33, 1212
MseI TTAA 5 cut(s) 339, 450, 665, 678, 876
MspA1I CMGCKG 4 cut(s) 187, 254, 860, 920
MspI CCGG 3 cut(s) 141, 166, 717
MspR9I CCNGG 6 cut(s) 166, 167, 233, 335, 660, 765
MvaI CCWGG 4 cut(s) 233, 335, 660, 765
MvnI CGCG 1 cut(s) 118
MwoI GCNNNNNNNGC 3 cut(s) 497, 731, 767
NciI CCSGG 2 cut(s) 166, 167
NdeII GATC 4 cut(s) 190, 214, 1234, 1238
NlaIII CATG 4 cut(s) 495, 532, 974, 1201
NlaIV GGNNCC 4 cut(s) 192, 699, 769, 967
NmuCI GTSAC 2 cut(s) 892, 913
NspI RCATGY 1 cut(s) 532
PaeI GCATGC 1 cut(s) 532
PaqCI CACCTGC 2 cut(s) 262, 1006
PfeI GAWTC 6 cut(s) 104, 586, 937, 1063, 1103, 1139
Pfl23II CGTACG 1 cut(s) 986
PkrI GCNGC 7 cut(s) 186, 250, 253, 469, 736, 859, 1228
Ple19I CGATCG 1 cut(s) 1241
PleI GAGTC 2 cut(s) 32, 1211
PpsI GAGTC 2 cut(s) 32, 1211
PpuMI RGGWCCY 1 cut(s) 322
PshBI ATTAAT 1 cut(s) 876
Psp124BI GAGCTC 1 cut(s) 1035
Psp5II RGGWCCY 1 cut(s) 322
Psp6I CCWGG 4 cut(s) 231, 333, 658, 763
PspGI CCWGG 4 cut(s) 231, 333, 658, 763
PspLI CGTACG 1 cut(s) 986
PspN4I GGNNCC 4 cut(s) 192, 699, 769, 967
PspPI GGNCC 4 cut(s) 322, 630, 698, 1016
PspPPI RGGWCCY 1 cut(s) 322
PstNI CAGNNNCTG 3 cut(s) 100, 232, 277
PsuI RGATCY 2 cut(s) 190, 214
PvuI CGATCG 1 cut(s) 1241
PvuII CAGCTG 3 cut(s) 254, 860, 920
RsaI GTAC 3 cut(s) 230, 967, 988
RsaNI GTAC 3 cut(s) 229, 966, 987
SacI GAGCTC 1 cut(s) 1035
SaqAI TTAA 5 cut(s) 339, 450, 665, 678, 876
SatI GCNGC 7 cut(s) 185, 249, 252, 468, 735, 858, 1227
Sau3AI GATC 4 cut(s) 190, 214, 1234, 1238
Sau96I GGNCC 4 cut(s) 322, 630, 698, 1016
SchI GAGTC 2 cut(s) 33, 1212
ScrFI CCNGG 6 cut(s) 166, 167, 233, 335, 660, 765
SduI GDGCHC 2 cut(s) 772, 1035
SexAI ACCWGGT 1 cut(s) 763
SfaNI GCATC 2 cut(s) 169, 806
SinI GGWCC 3 cut(s) 322, 698, 1016
SmaI CCCGGG 1 cut(s) 167
SmlI CTYRAG 1 cut(s) 641
SmoI CTYRAG 1 cut(s) 641
SphI GCATGC 1 cut(s) 532
Sse9I AATT 4 cut(s) 415, 569, 877, 1152
SsiI CCGC 4 cut(s) 58, 185, 249, 436
SstI GAGCTC 1 cut(s) 1035
StyD4I CCNGG 6 cut(s) 164, 165, 231, 333, 658, 763
StyI CCWWGG 1 cut(s) 288
TaaI ACNGT 3 cut(s) 476, 651, 1113
TaiI ACGT 1 cut(s) 546
TaqI TCGA 5 cut(s) 11, 174, 197, 546, 1237
TasI AATT 4 cut(s) 415, 569, 877, 1152
TauI GCSGC 2 cut(s) 187, 251
TfiI GAWTC 6 cut(s) 104, 586, 937, 1063, 1103, 1139
Tru1I TTAA 5 cut(s) 339, 450, 665, 678, 876
Tru9I TTAA 5 cut(s) 339, 450, 665, 678, 876
TscAI CASTG 1 cut(s) 396
TseFI GTSAC 2 cut(s) 892, 913
TseI GCWGC 5 cut(s) 251, 467, 734, 857, 1226
Tsp45I GTSAC 2 cut(s) 892, 913
TspDTI ATGAA 3 cut(s) 411, 819, 941
TspGWI ACGGA 3 cut(s) 183, 681, 1229
TspMI CCCGGG 1 cut(s) 165
TspRI CASTG 1 cut(s) 396
VpaK11BI GGWCC 3 cut(s) 322, 698, 1016
VspI ATTAAT 1 cut(s) 876
XagI CCTNNNNNAGG 1 cut(s) 762
XapI RAATTY 3 cut(s) 415, 569, 1152
XceI RCATGY 1 cut(s) 532
XcmI CCANNNNNNNNNTGG 1 cut(s) 850
XmaI CCCGGG 1 cut(s) 165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.