Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012952.1

Orthogroup ID

OG0007202

Physical Location & Seq

Genomic Coordinates Forward (+)

21181 .. 32302

Gene Structure 11122 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012952.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2691 bp

atggaggagaagctgatacagcggcttgaatcggcggtgacgcgcctggaggcgctgtcgctgtccgggggctctgccgcggcggcgagtggggacgacgcgccgctggatccgtcggttttggcgttcgaggatctgattgggcagtacgtgggtagggtttcggccgcggcggagaagattgggggacaggtgttggatatcaccaagattgtggcggaggcttttgctgcccagaaggacctgattatcaaggtcaagcaacacaagaaacctgacaatgcagggttggctgaatttctgaagccactcaatgaggtcattacaaaggcaaataaattgacagaaggaaggcgatctgattttttcaatcacttgaagagtgctgctgacagtctctcagctttagcatggattgcctatacagggaaagaatgtggtatgagcatgcctattgcacatgtcgaagaaagttggcagatggctgaattttacaacaacaagattcttgtcgagtataagaccaaagacccaaatcatgtagagtgggccaaagctatgaaggaactatatatgcctggtttgagagaatatgttaagagtttctatccgttgggtccagtctggagtccaaccggcacagctgttactgctgctccatcaaaaccaaaagctccggcaccaggtgcacctgctcctccacctcctccatcggcttcactcttcagttctgaaacttctaaggcttcgtcatcacgcccgaaagaagggatggcagctgttttccaagagatcaattctggcaagcctgtgactacaggtctgagaaaggtcacagatgatatgaagacaaagaatcgtgctgacagaactggggttgttggtacccaggagaaagaaagccgtactagtgcacctgctgtttctaaagtaggacctccgatgtttgagcttcaaatgggtcggaagtgggctgttgagaatcagattggaaagaaggatttggtgattagtgaatgtgatccaaaacagtcagtatatatttttggatgcaaagactctgttttgcaaattcaagggaaagtgaacaacattacaattgacaaatgcactaagatgggagttgtatttcaggatgttgtggctgcttttgagatcgtcaattgcaaccgtgttgaggtgcaatgtcagggctccgccccaacagtttcaattgacaacacagctggctgccaattttatttaagcaaggatgctctatctgcatctataacaacggctaaatcaagtgaagtgaatataatggtacctggtgctgaacctgatggcgattggggtgagcacgcattgccagaacaatttattcatgtgtataaggatgactcccagtcgttcatcggggtcaactacggccaggttgccgacaacctcccggcgccggcggccaccgccaagctcctccagtccacctccatcaagcaagtccgcctctacggatccgaccccgacgtcatcaaggccctcgccaacaccggcatcggcatcgtcatcggaatcgccaacgacgccatcccctccctcgccgccgatcccaacgccgccgcccagtgggtcaactcgaacgtcgtcccgttctacccggccagcaatatcaccctcatcaacgtcggcaatgaggtcctcttctccaacgaccagggcctcatctcgcagctcctccccgccatgcgaaatgtccagtctgccctcgccgccgcctccctcggcgggaaggtccgcgtctcctccgtccacgccatgacgttgctgtcgcagtccgacccgccctcctcgggtcggttcaacccggcgttggttgacgtcctcaaggggctgctggcgttccagagggacaatgcctcgcccttcgccatcaacccgtacccgtttttcgcctaccagagcgacccgagacccgaaacgctcgcgttttgcctcttccagcccaacgcgggacgagtcgacccgggctccgggatcaaatacatgaacatgttcgatgctcaggttgatgctgtgaagtctgccctgaatgcaattggattcaatgacattgatattttggtggccgagacaggatggccataccgcggagatagcaatgaagttggacctagtgttgagaatgcaaaggcatacaatggcaatttgattcagcatcttagatccatggttgggactccattgattcctggaaaacctgtggagacatacatatttgcactctatgatgaggatctgaaacctggtccaacctctgagcgatcgttcgggctgttcaagcttgatttatctcccagttatgatgctggtctctcaaagagtagccagactccctcaacaccatcagggactccttcaccgaggcctactccttcacctaagtctactacttcatcaaagtggtgcgtgcccaaaactagtggcgtttctgatgctcagttgcaggcaaatctcgactatgcttgtggccatggaattgattgcagcgcaatccaacccggaggtgcctgttttgacccaaacacagtagcatcccatgctgcctacgccatgaatctttactaccagactgttggcacagatccaatgaattgtgatttctcacaatcagcaacactgacctccacaaaccccagtaagtttccctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005938 GO:0006996 GO:0007010 GO:0007015 GO:0007154 GO:0007163 GO:0007165 GO:0008092 GO:0008150 GO:0008154 GO:0008179 GO:0009653 GO:0009826 GO:0009987 GO:0015629 GO:0016043 GO:0016049 GO:0019899 GO:0023052 GO:0030029 GO:0030036 GO:0030863 GO:0030864 GO:0031279 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0045761 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051339 GO:0051716 GO:0060560 GO:0065007 GO:0065009 GO:0071840 GO:0071944 GO:0097435 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAP_C CAP_N

Protein Analysis

896

Amino Acids

95.66

Weight (kDa)

5.68

Isoelectric Point (pI)

41.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34490 AT4G34490
fragaria_vesca	FvH4_2g08710 FvH4_2g08710
malus_domestica	MD05G1067200.v1.1 MD10G1076900.v1.1 MD10G1122300.v1.1
prunus_persica	Prupe.8G097900_v2.0.a1
pyrus_communis	pycom05g05800 pycom10g06010
rosa_chinensis	RchiOBHm_Chr6g0264151
rosa_laevigata	RLG00000014286 RLG00000014287
rosa_multiflora	Rmu_co8011486.1_g000001 Rmu_sc0012952.1_g000006
rosa_roxburghii	Rroxscaffold_176G00431440 Rroxscaffold_176G00431490 Rroxscaffold_7G00203570
rosa_rugosa	Rorug04G0194500 Rorug06G0007800
rosa_samantha	Rh6AG129400 Rh6BG125600 Rh6CG124400 Rh6DG111200
rosa_wichuraiana	Rw6G011200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	700, 925
AasI	GACNNNNNNGTC	2 cut(s)	1508, 1807
AatII	GACGTC	2 cut(s)	1512, 1863
Acc36I	ACCTGC	2 cut(s)	700, 925
Acc65I	GGTACC	2 cut(s)	884, 1306
AccB1I	GGYRCC	5 cut(s)	679, 884, 1306, 1435, 2546
AccI	GTMKAC	2 cut(s)	2001, 2426
AccII	CGCG	8 cut(s)	43, 80, 101, 170, 1779, 1967, 1991, 2130
AcoI	YGGCCR	7 cut(s)	165, 1411, 1443, 1641, 2106, 2120, 2509
AcsI	RAATTY	3 cut(s)	296, 488, 1071
AcuI	CTGAAG	2 cut(s)	323, 709
AcyI	GRCGYC	4 cut(s)	1436, 1509, 1566, 1860
AdeI	CACNNNGTG	1 cut(s)	686
AfaI	GTAC	5 cut(s)	149, 886, 907, 1308, 1922
AflIII	ACRYGT	2 cut(s)	460, 2031
AgsI	TTSAA	9 cut(s)	29, 370, 379, 956, 1076, 1212, 1843, 2086, 2320
AhdI	GACNNNNNGTC	2 cut(s)	819, 1387
AhlI	ACTAGT	2 cut(s)	908, 2459
AjnI	CCWGG	9 cut(s)	45, 577, 682, 888, 1309, 1413, 1695, 2230, 2284
Alw21I	GWGCWC	3 cut(s)	691, 916, 1344
Alw26I	GTCTC	6 cut(s)	401, 1786, 1945, 2105, 2240, 2357
Alw44I	GTGCAC	2 cut(s)	687, 912
Ama87I	CYCGRG	3 cut(s)	1831, 1948, 2005
ApaLI	GTGCAC	2 cut(s)	687, 912
ApoI	RAATTY	3 cut(s)	296, 488, 1071
Asp700I	GAANNNNTTC	1 cut(s)	2033
Asp718I	GGTACC	2 cut(s)	884, 1306
AspLEI	GCGC	5 cut(s)	45, 55, 103, 1438, 2531
AsuC2I	CCSGG	8 cut(s)	67, 1433, 1640, 1847, 2006, 2007, 2014, 2541
AsuHPI	GGTGA	7 cut(s)	49, 196, 1018, 1349, 1645, 2391, 2409
AvaI	CYCGRG	3 cut(s)	1831, 1948, 2005
AvaII	GGWCC	7 cut(s)	241, 617, 935, 1678, 1774, 2150, 2288
BaeGI	GKGCMC	3 cut(s)	691, 916, 2454
BalI	TGGCCA	2 cut(s)	2122, 2511
BamHI	GGATCC	2 cut(s)	109, 1496
BanI	GGYRCC	5 cut(s)	679, 884, 1306, 1435, 2546
BanII	GRGCYC	3 cut(s)	74, 1196, 2012
BbsI	GAAGAC	1 cut(s)	854
Bbv12I	GWGCWC	3 cut(s)	691, 916, 1344
BceAI	ACGGC	3 cut(s)	888, 1293, 1426
BcgI	CGANNNNNNTGC	4 cut(s)	1525, 1531, 1559, 1565
BciT130I	CCWGG	9 cut(s)	47, 579, 684, 890, 1311, 1415, 1697, 2232, 2286
BcnI	CCSGG	8 cut(s)	67, 1433, 1640, 1847, 2006, 2007, 2014, 2541
BcoDI	GTCTC	6 cut(s)	401, 1786, 1945, 2105, 2240, 2357
BcuI	ACTAGT	2 cut(s)	908, 2459
BfaI	CTAG	3 cut(s)	909, 2154, 2460
BfmI	CTRYAG	1 cut(s)	816
BfoI	RGCGCY	2 cut(s)	56, 1439
BfuAI	ACCTGC	2 cut(s)	700, 925
BglI	GCCNNNNNGGC	1 cut(s)	83
Bme18I	GGWCC	7 cut(s)	241, 617, 935, 1678, 1774, 2150, 2288
BmeRI	GACNNNNNGTC	2 cut(s)	819, 1387
BmeT110I	CYCGRG	3 cut(s)	1831, 1948, 2005
BmrI	ACTGGG	5 cut(s)	882, 1381, 1600, 2331, 2670
BmuI	ACTGGG	5 cut(s)	882, 1381, 1600, 2331, 2670
BpiI	GAAGAC	1 cut(s)	854
BplI	GAGNNNNNCTC	2 cut(s)	2395, 2427
BpmI	CTGGAG	3 cut(s)	68, 646, 1445
Bpu10I	CCTNAGC	1 cut(s)	2043
BpuEI	CTTGAG	1 cut(s)	1850
BpuMI	CCSGG	8 cut(s)	67, 1433, 1640, 1847, 2006, 2007, 2014, 2541
BsaAI	YACGTR	1 cut(s)	151
BsaBI	GATNNNNATC	1 cut(s)	2274
BsaHI	GRCGYC	4 cut(s)	1436, 1509, 1566, 1860
BsaI	GGTCTC	2 cut(s)	1945, 2357
BsaXI	ACNNNNNCTCC	8 cut(s)	41, 71, 640, 670, 1811, 1841, 1994, 2024
Bse118I	RCCGGY	3 cut(s)	635, 1438, 1532
Bse1I	ACTGG	8 cut(s)	620, 877, 1387, 1462, 1606, 1738, 2337, 2676
Bse3DI	GCAATG	4 cut(s)	1190, 1346, 1678, 2146
Bse8I	GATNNNNATC	1 cut(s)	2274
BseBI	CCWGG	9 cut(s)	47, 579, 684, 890, 1311, 1415, 1697, 2232, 2286
BseGI	GGATG	8 cut(s)	777, 1055, 1141, 1258, 1384, 1569, 2123, 2573
BseJI	GATNNNNATC	1 cut(s)	2274
BseMI	GCAATG	4 cut(s)	1190, 1346, 1678, 2146
BseMII	CTCAG	5 cut(s)	414, 815, 2057, 2289, 2492
BseNI	ACTGG	8 cut(s)	620, 877, 1387, 1462, 1606, 1738, 2337, 2676
BseRI	GAGGAG	7 cut(s)	20, 687, 696, 1448, 1706, 1774, 1819
BseSI	GKGCMC	3 cut(s)	691, 916, 2454
BseX3I	CGGCCG	1 cut(s)	165
Bsh1236I	CGCG	8 cut(s)	43, 80, 101, 170, 1779, 1967, 1991, 2130
Bsh1285I	CGRYCG	2 cut(s)	168, 2306
BshNI	GGYRCC	5 cut(s)	679, 884, 1306, 1435, 2546
BsiEI	CGRYCG	2 cut(s)	168, 2306
BsiHKAI	GWGCWC	3 cut(s)	691, 916, 1344
BsiHKCI	CYCGRG	3 cut(s)	1831, 1948, 2005
BslFI	GGGAC	7 cut(s)	107, 201, 1613, 1904, 2007, 2230, 2404
BsmAI	GTCTC	6 cut(s)	401, 1786, 1945, 2105, 2240, 2357
BsmBI	CGTCTC	1 cut(s)	1786
BsmFI	GGGAC	7 cut(s)	107, 201, 1613, 1904, 2007, 2230, 2404
BsmI	GAATGC	2 cut(s)	2077, 2170
Bso31I	GGTCTC	2 cut(s)	1945, 2357
BsoBI	CYCGRG	3 cut(s)	1831, 1948, 2005
Bsp1286I	GDGCHC	7 cut(s)	74, 691, 916, 1196, 1344, 2012, 2454
Bsp19I	CCATGG	2 cut(s)	2208, 2512
BspCNI	CTCAG	5 cut(s)	413, 816, 2056, 2290, 2491
BspFNI	CGCG	8 cut(s)	43, 80, 101, 170, 1779, 1967, 1991, 2130
BspMI	ACCTGC	2 cut(s)	700, 925
BspT107I	GGYRCC	5 cut(s)	679, 884, 1306, 1435, 2546
BspTNI	GGTCTC	2 cut(s)	1945, 2357
BsrDI	GCAATG	4 cut(s)	1190, 1346, 1678, 2146
BsrFI	RCCGGY	3 cut(s)	635, 1438, 1532
BsrI	ACTGG	8 cut(s)	620, 877, 1387, 1462, 1606, 1738, 2337, 2676
BssAI	RCCGGY	3 cut(s)	635, 1438, 1532
BssNI	GRCGYC	4 cut(s)	1436, 1509, 1566, 1860
BssT1I	CCWWGG	2 cut(s)	2208, 2512
Bst2UI	CCWGG	9 cut(s)	47, 579, 684, 890, 1311, 1415, 1697, 2232, 2286
Bst4CI	ACNGT	6 cut(s)	395, 1032, 1172, 1207, 2569, 2614
Bst6I	CTCTTC	4 cut(s)	374, 728, 1688, 1982
BstACI	GRCGYC	4 cut(s)	1436, 1509, 1566, 1860
BstAPI	GCANNNNNTGC	4 cut(s)	416, 686, 1348, 2579
BstBAI	YACGTR	1 cut(s)	151
BstDEI	CTNAG	9 cut(s)	400, 741, 824, 1113, 2043, 2201, 2298, 2421, 2478
BstDSI	CCRYGG	5 cut(s)	78, 168, 2128, 2208, 2512
BstF5I	GGATG	8 cut(s)	777, 1055, 1141, 1258, 1384, 1569, 2123, 2573
BstFNI	CGCG	8 cut(s)	43, 80, 101, 170, 1779, 1967, 1991, 2130
BstH2I	RGCGCY	2 cut(s)	56, 1439
BstHHI	GCGC	5 cut(s)	45, 55, 103, 1438, 2531
BstMAI	GTCTC	6 cut(s)	401, 1786, 1945, 2105, 2240, 2357
BstMCI	CGRYCG	2 cut(s)	168, 2306
BstNI	CCWGG	9 cut(s)	47, 579, 684, 890, 1311, 1415, 1697, 2232, 2286
BstNSI	RCATGY	3 cut(s)	451, 464, 2035
BstSFI	CTRYAG	1 cut(s)	816
BstSLI	GKGCMC	3 cut(s)	691, 916, 2454
BstUI	CGCG	8 cut(s)	43, 80, 101, 170, 1779, 1967, 1991, 2130
BstV2I	GAAGAC	1 cut(s)	854
BstX2I	RGATCY	6 cut(s)	109, 133, 1496, 2204, 2275, 2623
BstXI	CCANNNNNNTGG	2 cut(s)	214, 2615
BstYI	RGATCY	6 cut(s)	109, 133, 1496, 2204, 2275, 2623
BstZI	CGGCCG	1 cut(s)	165
BtgI	CCRYGG	5 cut(s)	78, 168, 2128, 2208, 2512
BtsCI	GGATG	8 cut(s)	777, 1055, 1141, 1258, 1384, 1569, 2123, 2573
BtsIMutI	CAGTG	2 cut(s)	1613, 2657
BveI	ACCTGC	2 cut(s)	700, 925
CfoI	GCGC	5 cut(s)	45, 55, 103, 1438, 2531
Cfr10I	RCCGGY	3 cut(s)	635, 1438, 1532
Cfr42I	CCGCGG	3 cut(s)	81, 171, 2131
Cfr9I	CCCGGG	1 cut(s)	2005
CseI	GACGC	4 cut(s)	49, 107, 1574, 1768
CsiI	ACCWGGT	3 cut(s)	682, 1309, 2284
Csp6I	GTAC	5 cut(s)	148, 885, 906, 1307, 1921
CspCI	CAANNNNNGTGG	2 cut(s)	2443, 2478
CviQI	GTAC	5 cut(s)	148, 885, 906, 1307, 1921
DdeI	CTNAG	9 cut(s)	400, 741, 824, 1113, 2043, 2201, 2298, 2421, 2478
DinI	GGCGCC	1 cut(s)	1437
DraIII	CACNNNGTG	1 cut(s)	686
DrdI	GACNNNNNNGTC	2 cut(s)	1508, 1807
DriI	GACNNNNNGTC	2 cut(s)	819, 1387
DseDI	GACNNNNNNGTC	2 cut(s)	1508, 1807
EaeI	YGGCCR	7 cut(s)	165, 1411, 1443, 1641, 2106, 2120, 2509
EagI	CGGCCG	1 cut(s)	165
Eam1104I	CTCTTC	4 cut(s)	374, 728, 1688, 1982
Eam1105I	GACNNNNNGTC	2 cut(s)	819, 1387
EarI	CTCTTC	4 cut(s)	374, 728, 1688, 1982
EciI	GGCGGA	4 cut(s)	188, 233, 1186, 1475
EclXI	CGGCCG	1 cut(s)	165
Eco130I	CCWWGG	2 cut(s)	2208, 2512
Eco147I	AGGCCT	1 cut(s)	2407
Eco24I	GRGCYC	3 cut(s)	74, 1196, 2012
Eco31I	GGTCTC	2 cut(s)	1945, 2357
Eco32I	GATATC	1 cut(s)	202
Eco47I	GGWCC	7 cut(s)	241, 617, 935, 1678, 1774, 2150, 2288
Eco52I	CGGCCG	1 cut(s)	165
Eco57I	CTGAAG	2 cut(s)	323, 709
Eco88I	CYCGRG	3 cut(s)	1831, 1948, 2005
EcoO109I	RGGNCCY	5 cut(s)	241, 935, 1519, 1678, 1699
EcoRII	CCWGG	9 cut(s)	45, 577, 682, 888, 1309, 1413, 1695, 2230, 2284
EcoRV	GATATC	1 cut(s)	202
EcoT14I	CCWWGG	2 cut(s)	2208, 2512
EcoT38I	GRGCYC	3 cut(s)	74, 1196, 2012
EgeI	GGCGCC	1 cut(s)	1437
EheI	GGCGCC	1 cut(s)	1437
ErhI	CCWWGG	2 cut(s)	2208, 2512
Esp3I	CGTCTC	1 cut(s)	1786
FaqI	GGGAC	7 cut(s)	107, 201, 1613, 1904, 2007, 2230, 2404
FauI	CCCGC	4 cut(s)	1729, 1760, 1830, 1984
FblI	GTMKAC	2 cut(s)	2001, 2426
FokI	GGATG	8 cut(s)	784, 1062, 1148, 1265, 1391, 1556, 2130, 2560
FriOI	GRGCYC	3 cut(s)	74, 1196, 2012
FspBI	CTAG	3 cut(s)	909, 2154, 2460
GlaI	GCGC	5 cut(s)	44, 54, 102, 1437, 2530
GsuI	CTGGAG	3 cut(s)	68, 646, 1445
HaeII	RGCGCY	2 cut(s)	56, 1439
HgaI	GACGC	4 cut(s)	49, 107, 1574, 1768
HhaI	GCGC	5 cut(s)	45, 55, 103, 1438, 2531
Hin1I	GRCGYC	4 cut(s)	1436, 1509, 1566, 1860
Hin6I	GCGC	5 cut(s)	43, 53, 101, 1436, 2529
HinP1I	GCGC	5 cut(s)	43, 53, 101, 1436, 2529
HincII	GTYRAC	4 cut(s)	1405, 1615, 1858, 2002
HindII	GTYRAC	4 cut(s)	1405, 1615, 1858, 2002
HindIII	AAGCTT	1 cut(s)	2321
HphI	GGTGA	7 cut(s)	49, 196, 1018, 1349, 1645, 2391, 2409
Hpy188III	TCNNGA	4 cut(s)	625, 1133, 1885, 2495
Hpy99I	CGWCG	6 cut(s)	101, 118, 1511, 1568, 1628, 1670
HpyCH4III	ACNGT	6 cut(s)	395, 1032, 1172, 1207, 2569, 2614
HpyCH4IV	ACGT	6 cut(s)	150, 1509, 1623, 1665, 1802, 1860
HpyF3I	CTNAG	9 cut(s)	400, 741, 824, 1113, 2043, 2201, 2298, 2421, 2478
HpySE526I	ACGT	6 cut(s)	150, 1509, 1623, 1665, 1802, 1860
Hsp92I	GRCGYC	4 cut(s)	1436, 1509, 1566, 1860
HspAI	GCGC	5 cut(s)	43, 53, 101, 1436, 2529
KasI	GGCGCC	1 cut(s)	1435
KpnI	GGTACC	2 cut(s)	888, 1310
KroI	GCCGGC	1 cut(s)	1438
KroNI	GCCGGC	1 cut(s)	1440
KspI	CCGCGG	3 cut(s)	81, 171, 2131
LmnI	GCTCC	7 cut(s)	661, 679, 700, 1199, 1461, 1719, 2015
MabI	ACCWGGT	3 cut(s)	682, 1309, 2284
MaeI	CTAG	3 cut(s)	909, 2154, 2460
MaeII	ACGT	6 cut(s)	150, 1509, 1623, 1665, 1802, 1860
MaeIII	GTNAC	4 cut(s)	37, 646, 811, 832
MboII	GAAGA	7 cut(s)	190, 391, 479, 715, 859, 1675, 1969
MfeI	CAATTG	4 cut(s)	1098, 1162, 1212, 2076
MflI	RGATCY	6 cut(s)	109, 133, 1496, 2204, 2275, 2623
MhlI	GDGCHC	7 cut(s)	74, 691, 916, 1196, 1344, 2012, 2454
MlsI	TGGCCA	2 cut(s)	2122, 2511
MluNI	TGGCCA	2 cut(s)	2122, 2511
Mly113I	GGCGCC	1 cut(s)	1436
MlyI	GAGTC	7 cut(s)	637, 1052, 1376, 2007, 2212, 2365, 2386
MmeI	TCCRAC	9 cut(s)	177, 656, 944, 1524, 1713, 1842, 2128, 2315, 2560
Mox20I	TGGCCA	2 cut(s)	2122, 2511
MreI	CGCCGGCG	1 cut(s)	1438
MroNI	GCCGGC	1 cut(s)	1438
MroXI	GAANNNNTTC	1 cut(s)	2033
MscI	TGGCCA	2 cut(s)	2122, 2511
MseI	TTAA	2 cut(s)	597, 1244
MslI	CAYNNNNRTG	3 cut(s)	1115, 2030, 2440
Msp20I	TGGCCA	2 cut(s)	2122, 2511
MspA1I	CMGCKG	8 cut(s)	22, 80, 106, 170, 644, 779, 1226, 2130
MunI	CAATTG	4 cut(s)	1098, 1162, 1212, 2076
Mva1269I	GAATGC	2 cut(s)	2077, 2170
MvaI	CCWGG	9 cut(s)	47, 579, 684, 890, 1311, 1415, 1697, 2232, 2286
MvnI	CGCG	8 cut(s)	43, 80, 101, 170, 1779, 1967, 1991, 2130
NaeI	GCCGGC	1 cut(s)	1440
NarI	GGCGCC	1 cut(s)	1436
NciI	CCSGG	8 cut(s)	67, 1433, 1640, 1847, 2006, 2007, 2014, 2541
NcoI	CCATGG	2 cut(s)	2208, 2512
NgoMIV	GCCGGC	1 cut(s)	1438
NmeAIII	GCCGAG	2 cut(s)	1743, 2134
NmuCI	GTSAC	3 cut(s)	37, 811, 832
NspI	RCATGY	3 cut(s)	451, 464, 2035
PaeI	GCATGC	1 cut(s)	451
PaqCI	CACCTGC	2 cut(s)	700, 925
PceI	AGGCCT	1 cut(s)	2407
PciI	ACATGT	2 cut(s)	460, 2031
PcsI	WCGNNNNNNNCGW	1 cut(s)	122
PctI	GAATGC	2 cut(s)	2077, 2170
PdiI	GCCGGC	1 cut(s)	1440
PdmI	GAANNNNTTC	1 cut(s)	2033
PfeI	GAWTC	9 cut(s)	29, 505, 856, 982, 1554, 2082, 2191, 2227, 2596
PfoI	TCCNGGA	2 cut(s)	2012, 2230
Ple19I	CGATCG	1 cut(s)	2306
PleI	GAGTC	7 cut(s)	636, 1052, 1376, 2006, 2212, 2365, 2386
PluTI	GGCGCC	1 cut(s)	1439
PpsI	GAGTC	7 cut(s)	636, 1052, 1376, 2006, 2212, 2365, 2386
Ppu21I	YACGTR	1 cut(s)	151
PpuMI	RGGWCCY	3 cut(s)	241, 935, 1678
PscI	ACATGT	2 cut(s)	460, 2031
Psp5II	RGGWCCY	3 cut(s)	241, 935, 1678
Psp6I	CCWGG	9 cut(s)	45, 577, 682, 888, 1309, 1413, 1695, 2230, 2284
PspGI	CCWGG	9 cut(s)	45, 577, 682, 888, 1309, 1413, 1695, 2230, 2284
PspPPI	RGGWCCY	3 cut(s)	241, 935, 1678
PsuI	RGATCY	6 cut(s)	109, 133, 1496, 2204, 2275, 2623
PvuI	CGATCG	1 cut(s)	2306
PvuII	CAGCTG	3 cut(s)	644, 779, 1226
RsaI	GTAC	5 cut(s)	149, 886, 907, 1308, 1922
RsaNI	GTAC	5 cut(s)	148, 885, 906, 1307, 1921
RseI	CAYNNNNRTG	3 cut(s)	1115, 2030, 2440
SacII	CCGCGG	3 cut(s)	81, 171, 2131
SalI	GTCGAC	1 cut(s)	2000
SaqAI	TTAA	2 cut(s)	597, 1244
SchI	GAGTC	7 cut(s)	637, 1052, 1376, 2007, 2212, 2365, 2386
SduI	GDGCHC	7 cut(s)	74, 691, 916, 1196, 1344, 2012, 2454
SexAI	ACCWGGT	3 cut(s)	682, 1309, 2284
SfcI	CTRYAG	1 cut(s)	816
SfoI	GGCGCC	1 cut(s)	1437
Sfr303I	CCGCGG	3 cut(s)	81, 171, 2131
SgrAI	CRCCGGYG	1 cut(s)	1438
SgrBI	CCGCGG	3 cut(s)	81, 171, 2131
SinI	GGWCC	7 cut(s)	241, 617, 935, 1678, 1774, 2150, 2288
SmaI	CCCGGG	1 cut(s)	2007
SmiMI	CAYNNNNRTG	3 cut(s)	1115, 2030, 2440
SmlI	CTYRAG	1 cut(s)	1865
SmoI	CTYRAG	1 cut(s)	1865
SpeI	ACTAGT	2 cut(s)	908, 2459
SphI	GCATGC	1 cut(s)	451
SseBI	AGGCCT	1 cut(s)	2407
SspDI	GGCGCC	1 cut(s)	1435
SspMI	CTAG	3 cut(s)	909, 2154, 2460
StuI	AGGCCT	1 cut(s)	2407
StyI	CCWWGG	2 cut(s)	2208, 2512
TaaI	ACNGT	6 cut(s)	395, 1032, 1172, 1207, 2569, 2614
TaiI	ACGT	6 cut(s)	153, 1512, 1626, 1668, 1805, 1863
TaqI	TCGA	7 cut(s)	129, 465, 513, 1619, 2001, 2037, 2496
TfiI	GAWTC	9 cut(s)	29, 505, 856, 982, 1554, 2082, 2191, 2227, 2596
Tru1I	TTAA	2 cut(s)	597, 1244
Tru9I	TTAA	2 cut(s)	597, 1244
TscAI	CASTG	2 cut(s)	1613, 2664
TseFI	GTSAC	3 cut(s)	37, 811, 832
Tsp45I	GTSAC	3 cut(s)	37, 811, 832
TspDTI	ATGAA	9 cut(s)	575, 860, 1355, 1384, 2042, 2157, 2424, 2609, 2645
TspGWI	ACGGA	4 cut(s)	102, 600, 1509, 1777
TspMI	CCCGGG	1 cut(s)	2005
TspRI	CASTG	2 cut(s)	1613, 2664
VneI	GTGCAC	2 cut(s)	687, 912
VpaK11BI	GGWCC	7 cut(s)	241, 617, 935, 1678, 1774, 2150, 2288
XapI	RAATTY	3 cut(s)	296, 488, 1071
XceI	RCATGY	3 cut(s)	451, 464, 2035
XmaI	CCCGGG	1 cut(s)	2005
XmiI	GTMKAC	2 cut(s)	2001, 2426
XmnI	GAANNNNTTC	1 cut(s)	2033
XspI	CTAG	3 cut(s)	909, 2154, 2460
ZraI	GACGTC	2 cut(s)	1510, 1861

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.