Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0007202

Physical Location & Seq

Genomic Coordinates Forward (+)

50378944 .. 50696672

Gene Structure 317729 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014286

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGGAGGAGAAGCTGATACAGCGGCTTGAATCGGCGGTGACGCGCCTGGAGGCGCTGTCGATGTCCGGGGGCTCTGCTGCGGCGGCGGCGCGGCGAGTGGGGACGACGCGCCGCTGGATCCGTCGGCAGTACGTGGGTAGGGTTTCGGCCGCAGCGGAGAAGATTGGGGGACAGGTGTTGGATATCACCAAGATTGTGGCGGAGGCTTTTGCTGCACAGAAGGACCTGATTATCAAGGTCAAGCAACACAAGAAACCTGACAATGCAGGGTTGGCTGAATTTCTGAAGCCACTCAACGAGGTCATTACGAAGGCAAATAAATTGACAGAAGGAAGGCGATCTGATTTTTTCAATCACTTGAAGAGTGCTGCTGACAGTCTCTCAGCTTTAGCATGGATTGCCTATACAGGGAAAGAATGTGGTATGAGCATGCCTATTGCACATGTCGAAGAAAGTTGGCAGATGGCTGAATTTTACAACAACAAGATTCTTGTCGAGTATAAAACCAAAGACCCAAATCATGTAGAGTGGGCCAAAGCTATGAAGGAACTATATATGCCTGGTTTGAGAGAATATGTTAAGAGTTTCTATCCGTTGGGTCCAGTCTGGAGTCCAACCGGCACAGCTGTTACTGCTGCTCCATCAAAACCAAAAGCTCCGGCACCAGGTGCACCTGCTCCTCCACCTCCTCCATCAGCTTCACTCTTCAGTTCTGAAACTTCTAAGGCTTCGTCATCACGCCCGAAAGAAGGGATGGCAGCTGTTTTCCAAGAGATCAATTCTGGCAAGCCTGTGACTTCAGGTCTGAGAAAGGTCACAGATGATATGAAGACGAAGAATCGTGCTGACAGAACTGGGGTTGTTGGTACCCAGGAGAAAGAAAGTCGTACTAGTGCACCTGCTGTTTCTAAAGTAGGACCTCCGAAGTTTGAGCTTCAAATGGGTCGGAAGTGGGCTGTTGAGAATCAGATTGGAAAGAAGGATTTGGTGATTAGTGAATGTGATCCAAAACAGTCAGTATATATTTTTGGATGCAAAGATTCTGTTTTGCAAATTCAAGGGAAAGTAAACAACATTACAATTGACAAATGCACTAAGATGGGAGTTGTATTTCAGGATGTTGTGGCTGCTTTTGAGATCGTCAATTGCAACCGTGTTGAGGTGCAATGTCAGGGCTCCGCCCCAACAGTTTCAATTGACAACACAGCTGGCTGCCAATTTTATTTAAGCAAGGATGCTCTCTCTGCATCTATAACAACAGCTAAATCAAGTGAAGTGAATATAATGGTACCTGGTGCTGAACCTGATGGCGATTGGGGCGAGCATGCATTGCCAGAACAGTTTATTCATGTGTATAAGGATGGTCGCTTTGAAACAACTCCAGTCTCTCACTCAGCAGGAGGATGCAGGGTACCGGCTACCTCCTGCATCTGGATGGTTAGCAGCCATCACCCTCCTATGGGCTTCCCTGACCTTGGTTATGGCCTATGGGAACACTCTCCGACTCCAAGTATTAGAGCTGCTTCCCTCCGGGTCATAGTAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005938 GO:0006996 GO:0007010 GO:0007015 GO:0007154 GO:0007163 GO:0007165 GO:0008092 GO:0008150 GO:0008154 GO:0008179 GO:0009653 GO:0009826 GO:0009987 GO:0015629 GO:0016043 GO:0016049 GO:0019899 GO:0023052 GO:0030029 GO:0030036 GO:0030863 GO:0030864 GO:0031279 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0045761 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051339 GO:0051716 GO:0060560 GO:0065007 GO:0065009 GO:0071840 GO:0071944 GO:0097435 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAP_C CAP_N

Protein Analysis

516

Amino Acids

55.89

Weight (kDa)

9.05

Isoelectric Point (pI)

47.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CAP_N-CM	PF01213	3 - 28	2.1e-06	CAP N-terminal conserved motif
CAP_N	PF21938	43 - 198	9.3e-34	CAP, N-terminal domain
CAP_C	PF08603	307 - 464	1e-61	Adenylate cyclase associated (CAP) C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34490 AT4G34490
fragaria_vesca	FvH4_2g08710 FvH4_2g08710
malus_domestica	MD05G1067200.v1.1 MD10G1076900.v1.1 MD10G1122300.v1.1
prunus_persica	Prupe.8G097900_v2.0.a1
pyrus_communis	pycom05g05800 pycom10g06010
rosa_chinensis	RchiOBHm_Chr6g0264151
rosa_laevigata	RLG00000014286 RLG00000014287
rosa_multiflora	Rmu_co8011486.1_g000001 Rmu_sc0012952.1_g000006
rosa_roxburghii	Rroxscaffold_176G00431440 Rroxscaffold_176G00431490 Rroxscaffold_7G00203570
rosa_rugosa	Rorug04G0194500 Rorug06G0007800
rosa_samantha	Rh6AG129400 Rh6BG125600 Rh6CG124400 Rh6DG111200
rosa_wichuraiana	Rw6G011200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	682, 907
Acc36I	ACCTGC	2 cut(s)	682, 907
Acc65I	GGTACC	3 cut(s)	866, 1288, 1411
AccB1I	GGYRCC	4 cut(s)	661, 866, 1288, 1411
AccII	CGCG	3 cut(s)	43, 91, 109
AclWI	GGATC	3 cut(s)	112, 125, 998
AcoI	YGGCCR	1 cut(s)	147
AcsI	RAATTY	3 cut(s)	278, 470, 1053
AcuI	CTGAAG	3 cut(s)	305, 691, 783
AdeI	CACNNNGTG	1 cut(s)	668
AfaI	GTAC	5 cut(s)	131, 868, 889, 1290, 1413
AfiI	CCNNNNNNNGG	8 cut(s)	408, 665, 749, 1159, 1431, 1459, 1460, 1475
AflIII	ACRYGT	1 cut(s)	442
AgsI	TTSAA	7 cut(s)	29, 352, 361, 938, 1058, 1194, 1373
AhdI	GACNNNNNGTC	1 cut(s)	801
AhlI	ACTAGT	1 cut(s)	890
AjnI	CCWGG	5 cut(s)	45, 559, 664, 870, 1291
Alw21I	GWGCWC	2 cut(s)	673, 898
Alw26I	GTCTC	2 cut(s)	383, 1390
Alw44I	GTGCAC	2 cut(s)	669, 894
AlwI	GGATC	3 cut(s)	112, 125, 998
AoxI	GGCC	3 cut(s)	147, 531, 1483
ApaLI	GTGCAC	2 cut(s)	669, 894
ApoI	RAATTY	3 cut(s)	278, 470, 1053
Asp718I	GGTACC	3 cut(s)	866, 1288, 1411
AspLEI	GCGC	4 cut(s)	45, 55, 91, 111
AspS9I	GGNCC	4 cut(s)	223, 531, 599, 917
AsuC2I	CCSGG	2 cut(s)	67, 1532
AsuHPI	GGTGA	4 cut(s)	49, 178, 1000, 1442
AvaII	GGWCC	3 cut(s)	223, 599, 917
BaeGI	GKGCMC	2 cut(s)	673, 898
BamHI	GGATCC	1 cut(s)	117
BanI	GGYRCC	4 cut(s)	661, 866, 1288, 1411
BanII	GRGCYC	2 cut(s)	74, 1178
BbsI	GAAGAC	1 cut(s)	836
Bbv12I	GWGCWC	2 cut(s)	673, 898
BccI	CCATC	9 cut(s)	457, 649, 700, 748, 1093, 1301, 1355, 1429, 1455
BciT130I	CCWGG	5 cut(s)	47, 561, 666, 872, 1293
BcnI	CCSGG	2 cut(s)	67, 1532
BcoDI	GTCTC	2 cut(s)	383, 1390
BcuI	ACTAGT	1 cut(s)	890
BfaI	CTAG	1 cut(s)	891
BfoI	RGCGCY	1 cut(s)	56
BfuAI	ACCTGC	2 cut(s)	682, 907
Bme1390I	CCNGG	7 cut(s)	47, 67, 561, 666, 872, 1293, 1532
Bme18I	GGWCC	3 cut(s)	223, 599, 917
BmeRI	GACNNNNNGTC	1 cut(s)	801
BmgT120I	GGNCC	4 cut(s)	223, 531, 599, 917
BmiI	GGNNCC	7 cut(s)	119, 600, 663, 868, 1177, 1290, 1413
BmrFI	CCNGG	7 cut(s)	47, 67, 561, 666, 872, 1293, 1532
BmrI	ACTGGG	1 cut(s)	864
BmsI	GCATC	5 cut(s)	1022, 1225, 1256, 1394, 1437
BmuI	ACTGGG	1 cut(s)	864
BpiI	GAAGAC	1 cut(s)	836
BpmI	CTGGAG	3 cut(s)	68, 628, 1365
BpuMI	CCSGG	2 cut(s)	67, 1532
BsaAI	YACGTR	1 cut(s)	133
BsaJI	CCNNGG	3 cut(s)	66, 870, 1474
BsaXI	ACNNNNNCTCC	4 cut(s)	41, 71, 622, 652
Bsc4I	CCNNNNNNNGG	8 cut(s)	408, 665, 749, 1159, 1431, 1459, 1460, 1475
Bse118I	RCCGGY	2 cut(s)	617, 1414
Bse1I	ACTGG	3 cut(s)	602, 859, 1382
Bse3DI	GCAATG	2 cut(s)	1172, 1328
BseBI	CCWGG	5 cut(s)	47, 561, 666, 872, 1293
BseDI	CCNNGG	3 cut(s)	66, 870, 1474
BseGI	GGATG	7 cut(s)	759, 1037, 1123, 1240, 1366, 1409, 1440
BseLI	CCNNNNNNNGG	8 cut(s)	408, 665, 749, 1159, 1431, 1459, 1460, 1475
BseMI	GCAATG	2 cut(s)	1172, 1328
BseMII	CTCAG	3 cut(s)	396, 797, 1407
BseNI	ACTGG	3 cut(s)	602, 859, 1382
BseRI	GAGGAG	3 cut(s)	20, 669, 678
BseSI	GKGCMC	2 cut(s)	673, 898
BseX3I	CGGCCG	1 cut(s)	147
BsgI	GTGCAG	1 cut(s)	198
Bsh1236I	CGCG	3 cut(s)	43, 91, 109
Bsh1285I	CGRYCG	1 cut(s)	150
BshFI	GGCC	3 cut(s)	149, 533, 1485
BshNI	GGYRCC	4 cut(s)	661, 866, 1288, 1411
BsiEI	CGRYCG	1 cut(s)	150
BsiHKAI	GWGCWC	2 cut(s)	673, 898
BsiSI	CCGG	5 cut(s)	66, 618, 659, 1415, 1531
BslFI	GGGAC	2 cut(s)	115, 183
BslI	CCNNNNNNNGG	8 cut(s)	408, 665, 749, 1159, 1431, 1459, 1460, 1475
BsmAI	GTCTC	2 cut(s)	383, 1390
BsmFI	GGGAC	2 cut(s)	115, 183
BsnI	GGCC	3 cut(s)	149, 533, 1485
Bsp1286I	GDGCHC	4 cut(s)	74, 673, 898, 1178
Bsp143I	GATC	5 cut(s)	117, 338, 774, 1003, 1137
BspANI	GGCC	3 cut(s)	149, 533, 1485
BspCNI	CTCAG	3 cut(s)	395, 798, 1406
BspFNI	CGCG	3 cut(s)	43, 91, 109
BspLI	GGNNCC	7 cut(s)	119, 600, 663, 868, 1177, 1290, 1413
BspMI	ACCTGC	2 cut(s)	682, 907
BspPI	GGATC	3 cut(s)	112, 125, 998
BspT107I	GGYRCC	4 cut(s)	661, 866, 1288, 1411
BsrDI	GCAATG	2 cut(s)	1172, 1328
BsrFI	RCCGGY	2 cut(s)	617, 1414
BsrI	ACTGG	3 cut(s)	602, 859, 1382
BssAI	RCCGGY	2 cut(s)	617, 1414
BssECI	CCNNGG	3 cut(s)	66, 870, 1474
BssMI	GATC	5 cut(s)	117, 338, 774, 1003, 1137
BssT1I	CCWWGG	1 cut(s)	1474
Bst2UI	CCWGG	5 cut(s)	47, 561, 666, 872, 1293
Bst4CI	ACNGT	5 cut(s)	377, 1014, 1154, 1189, 1341
Bst6I	CTCTTC	2 cut(s)	356, 710
BstAPI	GCANNNNNTGC	3 cut(s)	398, 668, 1330
BstBAI	YACGTR	1 cut(s)	133
BstC8I	GCNNGC	5 cut(s)	431, 788, 1210, 1322, 1326
BstDEI	CTNAG	5 cut(s)	382, 723, 806, 1095, 1393
BstF5I	GGATG	7 cut(s)	759, 1037, 1123, 1240, 1366, 1409, 1440
BstFNI	CGCG	3 cut(s)	43, 91, 109
BstH2I	RGCGCY	1 cut(s)	56
BstHHI	GCGC	4 cut(s)	45, 55, 91, 111
BstKTI	GATC	5 cut(s)	120, 341, 777, 1006, 1140
BstMAI	GTCTC	2 cut(s)	383, 1390
BstMBI	GATC	5 cut(s)	117, 338, 774, 1003, 1137
BstMCI	CGRYCG	1 cut(s)	150
BstNI	CCWGG	5 cut(s)	47, 561, 666, 872, 1293
BstNSI	RCATGY	3 cut(s)	433, 446, 1328
BstSCI	CCNGG	7 cut(s)	45, 65, 559, 664, 870, 1291, 1530
BstSLI	GKGCMC	2 cut(s)	673, 898
BstUI	CGCG	3 cut(s)	43, 91, 109
BstV2I	GAAGAC	1 cut(s)	836
BstX2I	RGATCY	1 cut(s)	117
BstXI	CCANNNNNNTGG	1 cut(s)	196
BstYI	RGATCY	1 cut(s)	117
BstZI	CGGCCG	1 cut(s)	147
BsuRI	GGCC	3 cut(s)	149, 533, 1485
BtsCI	GGATG	7 cut(s)	759, 1037, 1123, 1240, 1366, 1409, 1440
BveI	ACCTGC	2 cut(s)	682, 907
Cac8I	GCNNGC	5 cut(s)	431, 788, 1210, 1322, 1326
CfoI	GCGC	4 cut(s)	45, 55, 91, 111
Cfr10I	RCCGGY	2 cut(s)	617, 1414
Cfr13I	GGNCC	4 cut(s)	223, 531, 599, 917
CseI	GACGC	2 cut(s)	49, 115
CsiI	ACCWGGT	2 cut(s)	664, 1291
Csp6I	GTAC	5 cut(s)	130, 867, 888, 1289, 1412
CviAII	CATG	6 cut(s)	393, 430, 443, 521, 1325, 1349
CviQI	GTAC	5 cut(s)	130, 867, 888, 1289, 1412
DdeI	CTNAG	5 cut(s)	382, 723, 806, 1095, 1393
DpnI	GATC	5 cut(s)	119, 340, 776, 1005, 1139
DpnII	GATC	5 cut(s)	117, 338, 774, 1003, 1137
DraIII	CACNNNGTG	1 cut(s)	668
DriI	GACNNNNNGTC	1 cut(s)	801
EaeI	YGGCCR	1 cut(s)	147
EagI	CGGCCG	1 cut(s)	147
Eam1104I	CTCTTC	2 cut(s)	356, 710
Eam1105I	GACNNNNNGTC	1 cut(s)	801
EarI	CTCTTC	2 cut(s)	356, 710
EciI	GGCGGA	2 cut(s)	215, 1168
EclXI	CGGCCG	1 cut(s)	147
Eco130I	CCWWGG	1 cut(s)	1474
Eco24I	GRGCYC	2 cut(s)	74, 1178
Eco32I	GATATC	1 cut(s)	184
Eco47I	GGWCC	3 cut(s)	223, 599, 917
Eco52I	CGGCCG	1 cut(s)	147
Eco57I	CTGAAG	3 cut(s)	305, 691, 783
EcoO109I	RGGNCCY	2 cut(s)	223, 917
EcoRII	CCWGG	5 cut(s)	45, 559, 664, 870, 1291
EcoRV	GATATC	1 cut(s)	184
EcoT14I	CCWWGG	1 cut(s)	1474
EcoT22I	ATGCAT	1 cut(s)	1330
EcoT38I	GRGCYC	2 cut(s)	74, 1178
ErhI	CCWWGG	1 cut(s)	1474
FaeI	CATG	6 cut(s)	396, 433, 446, 524, 1328, 1352
FaqI	GGGAC	2 cut(s)	115, 183
FatI	CATG	6 cut(s)	392, 429, 442, 520, 1324, 1348
FokI	GGATG	7 cut(s)	766, 1044, 1130, 1247, 1373, 1416, 1447
FriOI	GRGCYC	2 cut(s)	74, 1178
FspBI	CTAG	1 cut(s)	891
GlaI	GCGC	4 cut(s)	44, 54, 90, 110
GsuI	CTGGAG	3 cut(s)	68, 628, 1365
HaeII	RGCGCY	1 cut(s)	56
HaeIII	GGCC	3 cut(s)	149, 533, 1485
HapII	CCGG	5 cut(s)	66, 618, 659, 1415, 1531
HgaI	GACGC	2 cut(s)	49, 115
HhaI	GCGC	4 cut(s)	45, 55, 91, 111
Hin1II	CATG	6 cut(s)	396, 433, 446, 524, 1328, 1352
Hin6I	GCGC	4 cut(s)	43, 53, 89, 109
HinP1I	GCGC	4 cut(s)	43, 53, 89, 109
HinfI	GANTC	7 cut(s)	29, 487, 610, 838, 964, 1040, 1504
HpaII	CCGG	5 cut(s)	66, 618, 659, 1415, 1531
HphI	GGTGA	4 cut(s)	49, 178, 1000, 1442
Hpy166II	GTNNAC	3 cut(s)	671, 896, 1069
Hpy188I	TCNGA	8 cut(s)	285, 343, 715, 807, 924, 948, 969, 1503
Hpy188III	TCNNGA	3 cut(s)	607, 1115, 1432
Hpy8I	GTNNAC	3 cut(s)	671, 896, 1069
Hpy99I	CGWCG	2 cut(s)	109, 126
HpyAV	CCTTC	7 cut(s)	214, 304, 323, 327, 538, 743, 973
HpyCH4III	ACNGT	5 cut(s)	377, 1014, 1154, 1189, 1341
HpyCH4IV	ACGT	1 cut(s)	132
HpyF3I	CTNAG	5 cut(s)	382, 723, 806, 1095, 1393
HpySE526I	ACGT	1 cut(s)	132
Hsp92II	CATG	6 cut(s)	396, 433, 446, 524, 1328, 1352
HspAI	GCGC	4 cut(s)	43, 53, 89, 109
KpnI	GGTACC	3 cut(s)	870, 1292, 1415
Kzo9I	GATC	5 cut(s)	117, 338, 774, 1003, 1137
LmnI	GCTCC	4 cut(s)	643, 661, 682, 1181
LweI	GCATC	5 cut(s)	1022, 1225, 1256, 1394, 1437
MabI	ACCWGGT	2 cut(s)	664, 1291
MaeI	CTAG	1 cut(s)	891
MaeII	ACGT	1 cut(s)	132
MaeIII	GTNAC	4 cut(s)	37, 628, 793, 814
MalI	GATC	5 cut(s)	119, 340, 776, 1005, 1139
MboI	GATC	5 cut(s)	117, 338, 774, 1003, 1137
MboII	GAAGA	6 cut(s)	172, 373, 461, 697, 841, 847
MfeI	CAATTG	3 cut(s)	1080, 1144, 1194
MflI	RGATCY	1 cut(s)	117
MhlI	GDGCHC	4 cut(s)	74, 673, 898, 1178
MluCI	AATT	9 cut(s)	278, 320, 470, 778, 1053, 1080, 1144, 1194, 1217
MlyI	GAGTC	2 cut(s)	619, 1498
MmeI	TCCRAC	4 cut(s)	159, 638, 926, 1526
Mph1103I	ATGCAT	1 cut(s)	1330
MseI	TTAA	2 cut(s)	579, 1226
MslI	CAYNNNNRTG	2 cut(s)	1097, 1433
MspA1I	CMGCKG	6 cut(s)	22, 114, 155, 626, 761, 1208
MspI	CCGG	5 cut(s)	66, 618, 659, 1415, 1531
MspR9I	CCNGG	7 cut(s)	47, 67, 561, 666, 872, 1293, 1532
MunI	CAATTG	3 cut(s)	1080, 1144, 1194
MvaI	CCWGG	5 cut(s)	47, 561, 666, 872, 1293
MvnI	CGCG	3 cut(s)	43, 91, 109
NciI	CCSGG	2 cut(s)	67, 1532
NdeII	GATC	5 cut(s)	117, 338, 774, 1003, 1137
NlaIII	CATG	6 cut(s)	396, 433, 446, 524, 1328, 1352
NlaIV	GGNNCC	7 cut(s)	119, 600, 663, 868, 1177, 1290, 1413
NmuCI	GTSAC	3 cut(s)	37, 793, 814
NsiI	ATGCAT	1 cut(s)	1330
NspI	RCATGY	3 cut(s)	433, 446, 1328
PaeI	GCATGC	2 cut(s)	433, 1328
PaqCI	CACCTGC	2 cut(s)	682, 907
PciI	ACATGT	1 cut(s)	442
PfeI	GAWTC	5 cut(s)	29, 487, 838, 964, 1040
PleI	GAGTC	2 cut(s)	618, 1498
PpsI	GAGTC	2 cut(s)	618, 1498
Ppu21I	YACGTR	1 cut(s)	133
PpuMI	RGGWCCY	2 cut(s)	223, 917
PscI	ACATGT	1 cut(s)	442
Psp5II	RGGWCCY	2 cut(s)	223, 917
Psp6I	CCWGG	5 cut(s)	45, 559, 664, 870, 1291
PspGI	CCWGG	5 cut(s)	45, 559, 664, 870, 1291
PspN4I	GGNNCC	7 cut(s)	119, 600, 663, 868, 1177, 1290, 1413
PspPI	GGNCC	4 cut(s)	223, 531, 599, 917
PspPPI	RGGWCCY	2 cut(s)	223, 917
PsuI	RGATCY	1 cut(s)	117
PvuII	CAGCTG	3 cut(s)	626, 761, 1208
RsaI	GTAC	5 cut(s)	131, 868, 889, 1290, 1413
RsaNI	GTAC	5 cut(s)	130, 867, 888, 1289, 1412
RseI	CAYNNNNRTG	2 cut(s)	1097, 1433
SaqAI	TTAA	2 cut(s)	579, 1226
Sau3AI	GATC	5 cut(s)	117, 338, 774, 1003, 1137
Sau96I	GGNCC	4 cut(s)	223, 531, 599, 917
SchI	GAGTC	2 cut(s)	619, 1498
ScrFI	CCNGG	7 cut(s)	47, 67, 561, 666, 872, 1293, 1532
SduI	GDGCHC	4 cut(s)	74, 673, 898, 1178
SexAI	ACCWGGT	2 cut(s)	664, 1291
SfaNI	GCATC	5 cut(s)	1022, 1225, 1256, 1394, 1437
SinI	GGWCC	3 cut(s)	223, 599, 917
SmiMI	CAYNNNNRTG	2 cut(s)	1097, 1433
SpeI	ACTAGT	1 cut(s)	890
SphI	GCATGC	2 cut(s)	433, 1328
Sse9I	AATT	9 cut(s)	278, 320, 470, 778, 1053, 1080, 1144, 1194, 1217
SspMI	CTAG	1 cut(s)	891
StyD4I	CCNGG	7 cut(s)	45, 65, 559, 664, 870, 1291, 1530
StyI	CCWWGG	1 cut(s)	1474
TaaI	ACNGT	5 cut(s)	377, 1014, 1154, 1189, 1341
TaiI	ACGT	1 cut(s)	135
TaqI	TCGA	3 cut(s)	59, 447, 495
TasI	AATT	9 cut(s)	278, 320, 470, 778, 1053, 1080, 1144, 1194, 1217
TauI	GCSGC	7 cut(s)	25, 83, 86, 89, 94, 114, 152
TfiI	GAWTC	5 cut(s)	29, 487, 838, 964, 1040
Tru1I	TTAA	2 cut(s)	579, 1226
Tru9I	TTAA	2 cut(s)	579, 1226
TseFI	GTSAC	3 cut(s)	37, 793, 814
Tsp45I	GTSAC	3 cut(s)	37, 793, 814
TspDTI	ATGAA	3 cut(s)	557, 842, 1337
TspGWI	ACGGA	2 cut(s)	110, 582
VneI	GTGCAC	2 cut(s)	669, 894
VpaK11BI	GGWCC	3 cut(s)	223, 599, 917
XapI	RAATTY	3 cut(s)	278, 470, 1053
XceI	RCATGY	3 cut(s)	433, 446, 1328
XspI	CTAG	1 cut(s)	891
Zsp2I	ATGCAT	1 cut(s)	1330

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.