pycom10g06640

14-3-3-like protein 16R

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
7770899 .. 7772931
2033 bp
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UTR
Exon/CDS
Intron
pycom10g06640.4

Sequence Viewer

Length: 399 bp
ATGAAAGGGGATTACCATAGGTATTTGGCTGAGTTCAAAACCGGGGATGAGCGTAAAGAGGCGGCTGAGAACACCCTCAATGCCTATAAGGCAGCGCAGGATATTGCAACCTCTGAGTTGGCTCCAACTCATCCCATCCGTTTAGGATTGGCTTTGAACTTCTCTGTGTTTTACTACGAGATTCTAAATTCTCCTGACCGGGCTTGCAGCCTTGCAAAGCAGGCTTTTGATGAAGCCATTGCAGAGCTGGATACACTGGGAGAGGATTCATACAAGGATAGCACTCTGATAATGCAACTTCTTCGTGATAATCTCACATTGTGGACTTCGGATATGCAGGATGACGGAACAGATGAGATTAAAGAAGCATCCAAGCCTCAGGCTGAGCCACAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

133

Amino Acids

14.85

Weight (kDa)

4.43

Isoelectric Point (pI)

34.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 62
AcsI RAATTY 1 cut(s) 187
AdeI CACNNNGTG 1 cut(s) 321
AgsI TTSAA 2 cut(s) 37, 157
AleI CACNNNNGTG 1 cut(s) 394
AluBI AGCT 1 cut(s) 247
AluI AGCT 1 cut(s) 247
ApeKI GCWGC 2 cut(s) 92, 207
ApoI RAATTY 1 cut(s) 187
AspLEI GCGC 1 cut(s) 97
AsuC2I CCSGG 2 cut(s) 43, 200
AxyI CCTNAGG 1 cut(s) 378
BbvI GCAGC 2 cut(s) 104, 219
BccI CCATC 1 cut(s) 143
BcgI CGANNNNNNTGC 2 cut(s) 284, 318
BciVI GTATCC 1 cut(s) 244
BcnI CCSGG 2 cut(s) 43, 200
BfuI GTATCC 1 cut(s) 244
BglI GCCNNNNNGGC 1 cut(s) 89
BisI GCNGC 3 cut(s) 63, 93, 208
BlpI GCTNAGC 1 cut(s) 384
BlsI GCNGC 3 cut(s) 64, 94, 209
Bme1390I CCNGG 2 cut(s) 43, 200
BmiI GGNNCC 1 cut(s) 123
BmrFI CCNGG 2 cut(s) 43, 200
BmrI ACTGGG 1 cut(s) 266
BmsI GCATC 1 cut(s) 377
BmuI ACTGGG 1 cut(s) 266
Bpu1102I GCTNAGC 1 cut(s) 384
BpuMI CCSGG 2 cut(s) 43, 200
BsaJI CCNNGG 1 cut(s) 42
Bse1I ACTGG 1 cut(s) 261
Bse21I CCTNAGG 1 cut(s) 378
Bse3DI GCAATG 1 cut(s) 237
BseDI CCNNGG 1 cut(s) 42
BseGI GGATG 5 cut(s) 52, 130, 135, 346, 368
BseMI GCAATG 1 cut(s) 237
BseMII CTCAG 5 cut(s) 21, 57, 105, 375, 392
BseNI ACTGG 1 cut(s) 261
BseXI GCAGC 2 cut(s) 104, 219
BsiSI CCGG 2 cut(s) 42, 199
Bsp1720I GCTNAGC 1 cut(s) 384
BspACI CCGC 1 cut(s) 62
BspCNI CTCAG 5 cut(s) 22, 58, 106, 376, 391
BspLI GGNNCC 1 cut(s) 123
BsrDI GCAATG 1 cut(s) 237
BsrI ACTGG 1 cut(s) 261
BssECI CCNNGG 1 cut(s) 42
BstC8I GCNNGC 2 cut(s) 205, 222
BstDEI CTNAG 5 cut(s) 30, 66, 114, 378, 384
BstF5I GGATG 5 cut(s) 52, 130, 135, 346, 368
BstHHI GCGC 1 cut(s) 97
BstMWI GCNNNNNNNGC 2 cut(s) 89, 221
BstSCI CCNGG 2 cut(s) 41, 198
BstV1I GCAGC 2 cut(s) 104, 219
Bsu36I CCTNAGG 1 cut(s) 378
BsuI GTATCC 1 cut(s) 244
BtsCI GGATG 5 cut(s) 52, 130, 135, 346, 368
BtsIMutI CAGTG 1 cut(s) 254
Cac8I GCNNGC 2 cut(s) 205, 222
CfoI GCGC 1 cut(s) 97
DdeI CTNAG 5 cut(s) 30, 66, 114, 378, 384
DraIII CACNNNGTG 1 cut(s) 321
Eco81I CCTNAGG 1 cut(s) 378
FaiI YATR 4 cut(s) 18, 87, 271, 335
Fnu4HI GCNGC 3 cut(s) 63, 93, 208
FokI GGATG 5 cut(s) 59, 117, 122, 353, 355
Fsp4HI GCNGC 3 cut(s) 63, 93, 208
GlaI GCGC 1 cut(s) 96
GluI GCNGC 3 cut(s) 63, 93, 208
HapII CCGG 2 cut(s) 42, 199
HhaI GCGC 1 cut(s) 97
Hin6I GCGC 1 cut(s) 95
HinP1I GCGC 1 cut(s) 95
HinfI GANTC 2 cut(s) 181, 266
HpaII CCGG 2 cut(s) 42, 199
Hpy166II GTNNAC 1 cut(s) 324
Hpy188I TCNGA 3 cut(s) 115, 288, 331
Hpy188III TCNNGA 2 cut(s) 194, 305
Hpy8I GTNNAC 1 cut(s) 324
HpyCH4V TGCA 6 cut(s) 107, 207, 215, 242, 295, 337
HpyF10VI GCNNNNNNNGC 2 cut(s) 89, 221
HpyF3I CTNAG 5 cut(s) 30, 66, 114, 378, 384
HspAI GCGC 1 cut(s) 95
LmnI GCTCC 1 cut(s) 127
LpnPI CCDG 9 cut(s) 55, 83, 206, 207, 212, 233, 242, 323, 365
Lsp1109I GCAGC 2 cut(s) 104, 219
LweI GCATC 1 cut(s) 377
MboII GAAGA 1 cut(s) 293
MluCI AATT 1 cut(s) 187
MmeI TCCRAC 1 cut(s) 149
MnlI CCTC 5 cut(s) 52, 86, 121, 256, 387
MseI TTAA 1 cut(s) 360
MslI CAYNNNNRTG 1 cut(s) 394
MspI CCGG 2 cut(s) 42, 199
MspR9I CCNGG 2 cut(s) 43, 200
MwoI GCNNNNNNNGC 2 cut(s) 89, 221
NciI CCSGG 2 cut(s) 43, 200
NlaIV GGNNCC 1 cut(s) 123
OliI CACNNNNGTG 1 cut(s) 394
PfeI GAWTC 2 cut(s) 181, 266
PkrI GCNGC 3 cut(s) 64, 94, 209
PspN4I GGNNCC 1 cut(s) 123
RseI CAYNNNNRTG 1 cut(s) 394
SaqAI TTAA 1 cut(s) 360
SatI GCNGC 3 cut(s) 63, 93, 208
ScrFI CCNGG 2 cut(s) 43, 200
SetI ASST 3 cut(s) 23, 113, 249
SfaNI GCATC 1 cut(s) 377
SmiMI CAYNNNNRTG 1 cut(s) 394
Sse9I AATT 1 cut(s) 187
SsiI CCGC 1 cut(s) 62
StyD4I CCNGG 2 cut(s) 41, 198
TasI AATT 1 cut(s) 187
TauI GCSGC 1 cut(s) 65
TfiI GAWTC 2 cut(s) 181, 266
Tru1I TTAA 1 cut(s) 360
Tru9I TTAA 1 cut(s) 360
TscAI CASTG 1 cut(s) 261
TseI GCWGC 2 cut(s) 92, 207
TspDTI ATGAA 3 cut(s) 17, 246, 258
TspGWI ACGGA 2 cut(s) 128, 360
TspRI CASTG 1 cut(s) 261
XapI RAATTY 1 cut(s) 187
XcmI CCANNNNNNNNNTGG 1 cut(s) 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.