No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom03g14320 pycom05g27920 pycom10g06640 pycom17g07560 |
| rosa_chinensis | RchiOBHm_Chr1g0320321 RchiOBHm_Chr2g0086351 RchiOBHm_Chr6g0254621 |
| rosa_laevigata | RLG00000014896 |
| rosa_roxburghii | Rroxscaffold_7G00210630 |
| rosa_rugosa | Rorug05G0553500 Rorug05G0554400 |
| rosa_samantha | Rh6AG070600 Rh6AG070800 Rh6AG071000 Rh6AG071100 Rh6AG110900 Rh6BG063000 Rh6BG063400 Rh6BG063500 Rh7AG296800 |
| rosa_wichuraiana | Rw6G006210 Rw6G006230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 235 |
| AfaI | GTAC | 1 cut(s) | 224 |
| AflIII | ACRYGT | 1 cut(s) | 130 |
| AgsI | TTSAA | 2 cut(s) | 149, 198 |
| AjiI | CACGTC | 1 cut(s) | 133 |
| AluBI | AGCT | 1 cut(s) | 172 |
| AluI | AGCT | 1 cut(s) | 172 |
| ApeKI | GCWGC | 1 cut(s) | 169 |
| ApoI | RAATTY | 1 cut(s) | 235 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 49, 81 |
| BbvI | GCAGC | 1 cut(s) | 181 |
| BccI | CCATC | 1 cut(s) | 100 |
| BisI | GCNGC | 1 cut(s) | 170 |
| BlsI | GCNGC | 1 cut(s) | 171 |
| BmgBI | CACGTC | 1 cut(s) | 133 |
| BmsI | GCATC | 1 cut(s) | 16 |
| Bse1I | ACTGG | 1 cut(s) | 251 |
| BseGI | GGATG | 1 cut(s) | 127 |
| BseMII | CTCAG | 1 cut(s) | 164 |
| BseNI | ACTGG | 1 cut(s) | 251 |
| BseXI | GCAGC | 1 cut(s) | 181 |
| BsgI | GTGCAG | 1 cut(s) | 188 |
| Bsp143I | GATC | 1 cut(s) | 9 |
| BspCNI | CTCAG | 1 cut(s) | 165 |
| BsrI | ACTGG | 1 cut(s) | 251 |
| BssMI | GATC | 1 cut(s) | 9 |
| BstC8I | GCNNGC | 2 cut(s) | 53, 167 |
| BstDEI | CTNAG | 1 cut(s) | 173 |
| BstF5I | GGATG | 1 cut(s) | 127 |
| BstKTI | GATC | 1 cut(s) | 12 |
| BstMBI | GATC | 1 cut(s) | 9 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 162 |
| BstNSI | RCATGY | 1 cut(s) | 55 |
| BstV1I | GCAGC | 1 cut(s) | 181 |
| BtrI | CACGTC | 1 cut(s) | 133 |
| BtsCI | GGATG | 1 cut(s) | 127 |
| BtsI | GCAGTG | 1 cut(s) | 12 |
| BtsIMutI | CAGTG | 1 cut(s) | 12 |
| Cac8I | GCNNGC | 2 cut(s) | 53, 167 |
| Csp6I | GTAC | 1 cut(s) | 223 |
| CviAII | CATG | 2 cut(s) | 52, 247 |
| CviJI | RGCY | 2 cut(s) | 172, 264 |
| CviKI_1 | RGCY | 2 cut(s) | 172, 264 |
| CviQI | GTAC | 1 cut(s) | 223 |
| DdeI | CTNAG | 1 cut(s) | 173 |
| DpnI | GATC | 1 cut(s) | 11 |
| DpnII | GATC | 1 cut(s) | 9 |
| FaeI | CATG | 2 cut(s) | 55, 250 |
| FaiI | YATR | 4 cut(s) | 18, 53, 158, 248 |
| FatI | CATG | 2 cut(s) | 51, 246 |
| Fnu4HI | GCNGC | 1 cut(s) | 170 |
| FokI | GGATG | 1 cut(s) | 134 |
| Fsp4HI | GCNGC | 1 cut(s) | 170 |
| GluI | GCNGC | 1 cut(s) | 170 |
| Hin1II | CATG | 2 cut(s) | 55, 250 |
| HinfI | GANTC | 3 cut(s) | 42, 145, 177 |
| Hpy188I | TCNGA | 1 cut(s) | 69 |
| Hpy188III | TCNNGA | 1 cut(s) | 46 |
| Hpy99I | CGWCG | 1 cut(s) | 137 |
| HpyCH4IV | ACGT | 1 cut(s) | 132 |
| HpyCH4V | TGCA | 2 cut(s) | 55, 169 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 162 |
| HpyF3I | CTNAG | 1 cut(s) | 173 |
| HpySE526I | ACGT | 1 cut(s) | 132 |
| Hsp92II | CATG | 2 cut(s) | 55, 250 |
| Kzo9I | GATC | 1 cut(s) | 9 |
| LmnI | GCTCC | 1 cut(s) | 48 |
| LpnPI | CCDG | 3 cut(s) | 15, 31, 264 |
| Lsp1109I | GCAGC | 1 cut(s) | 181 |
| LweI | GCATC | 1 cut(s) | 16 |
| MaeII | ACGT | 1 cut(s) | 132 |
| MalI | GATC | 1 cut(s) | 11 |
| MboI | GATC | 1 cut(s) | 9 |
| MluCI | AATT | 1 cut(s) | 235 |
| MnlI | CCTC | 3 cut(s) | 32, 135, 205 |
| MspA1I | CMGCKG | 1 cut(s) | 172 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 162 |
| NdeII | GATC | 1 cut(s) | 9 |
| NlaIII | CATG | 2 cut(s) | 55, 250 |
| NspI | RCATGY | 1 cut(s) | 55 |
| PaeI | GCATGC | 1 cut(s) | 55 |
| PfeI | GAWTC | 3 cut(s) | 42, 145, 177 |
| PkrI | GCNGC | 1 cut(s) | 171 |
| PvuII | CAGCTG | 1 cut(s) | 172 |
| RsaI | GTAC | 1 cut(s) | 224 |
| RsaNI | GTAC | 1 cut(s) | 223 |
| SatI | GCNGC | 1 cut(s) | 170 |
| Sau3AI | GATC | 1 cut(s) | 9 |
| SetI | ASST | 3 cut(s) | 135, 174, 203 |
| SfaNI | GCATC | 1 cut(s) | 16 |
| SphI | GCATGC | 1 cut(s) | 55 |
| Sse9I | AATT | 1 cut(s) | 235 |
| TaiI | ACGT | 1 cut(s) | 135 |
| TasI | AATT | 1 cut(s) | 235 |
| TatI | WGTACW | 1 cut(s) | 222 |
| TfiI | GAWTC | 3 cut(s) | 42, 145, 177 |
| TscAI | CASTG | 1 cut(s) | 12 |
| TseI | GCWGC | 1 cut(s) | 169 |
| TspDTI | ATGAA | 2 cut(s) | 138, 235 |
| TspRI | CASTG | 1 cut(s) | 12 |
| XapI | RAATTY | 1 cut(s) | 235 |
| XceI | RCATGY | 1 cut(s) | 55 |