Rh7AG296800

Belongs to the 14-3-3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0009729
Physical Location & Seq
Reverse (-)
32496889 .. 32502543
5655 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG296800.1

Sequence Viewer

Length: 234 bp
ATGAGAGCCTGTCATCTTGCAAAGCAAGCCTTTGATGAAGCTATCTCCGAGCTGGATACTTTGAGTGAGGAGTCATACAAGGACAACACCTTAATCATGCAACTCTTGAGGGACAACCTCACATTGTGGACATCTGACATCCCGGAGGATGGAGCAAAGTTTGATCCTTTTTCAATGTCGATTCGTTTGGTTGATATAGGTGAAAAAATTTATTTGCGTCTGGTGCTTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04011 ko04110 ko04114 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04151 map04390 map04391 map04722 map05169 map05203
Pfam Domains
Protein Families
14-3-3

Protein Analysis

77

Amino Acids

8.88

Weight (kDa)

4.5

Isoelectric Point (pI)

46.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
14-3-3 PF00244 2 - 44 6.2e-18 14-3-3 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 158
AcsI RAATTY 1 cut(s) 207
AdeI CACNNNGTG 1 cut(s) 126
AfiI CCNNNNNNNGG 1 cut(s) 149
AgsI TTSAA 2 cut(s) 174, 230
AluBI AGCT 2 cut(s) 41, 52
AluI AGCT 2 cut(s) 41, 52
AlwI GGATC 1 cut(s) 158
ApoI RAATTY 1 cut(s) 207
AsuC2I CCSGG 1 cut(s) 143
AsuHPI GGTGA 1 cut(s) 212
BccI CCATC 1 cut(s) 143
BciVI GTATCC 1 cut(s) 49
BcnI CCSGG 1 cut(s) 143
BfuI GTATCC 1 cut(s) 49
Bme1390I CCNGG 1 cut(s) 143
BmrFI CCNGG 1 cut(s) 143
BpuEI CTTGAG 1 cut(s) 127
BpuMI CCSGG 1 cut(s) 143
Bsc4I CCNNNNNNNGG 1 cut(s) 149
BseGI GGATG 2 cut(s) 138, 154
BseLI CCNNNNNNNGG 1 cut(s) 149
BseRI GAGGAG 1 cut(s) 83
BsiSI CCGG 1 cut(s) 143
BslFI GGGAC 1 cut(s) 125
BslI CCNNNNNNNGG 1 cut(s) 149
BsmFI GGGAC 1 cut(s) 125
Bsp143I GATC 1 cut(s) 163
BspPI GGATC 1 cut(s) 158
BssMI GATC 1 cut(s) 163
BstC8I GCNNGC 1 cut(s) 27
BstF5I GGATG 2 cut(s) 138, 154
BstKTI GATC 1 cut(s) 166
BstMBI GATC 1 cut(s) 163
BstMWI GCNNNNNNNGC 2 cut(s) 26, 223
BstSCI CCNGG 1 cut(s) 141
BsuI GTATCC 1 cut(s) 49
BtsCI GGATG 2 cut(s) 138, 154
Cac8I GCNNGC 1 cut(s) 27
CseI GACGC 1 cut(s) 206
CviAII CATG 1 cut(s) 97
CviJI RGCY 4 cut(s) 8, 29, 41, 52
CviKI_1 RGCY 4 cut(s) 8, 29, 41, 52
DpnI GATC 1 cut(s) 165
DpnII GATC 1 cut(s) 163
DraIII CACNNNGTG 1 cut(s) 126
FaeI CATG 1 cut(s) 100
FaiI YATR 3 cut(s) 76, 98, 197
FalI AAGNNNNNCTT 2 cut(s) 14, 46
FaqI GGGAC 1 cut(s) 125
FatI CATG 1 cut(s) 96
FokI GGATG 2 cut(s) 125, 161
HapII CCGG 1 cut(s) 143
HgaI GACGC 1 cut(s) 206
Hin1II CATG 1 cut(s) 100
HinfI GANTC 2 cut(s) 71, 181
HpaII CCGG 1 cut(s) 143
HphI GGTGA 1 cut(s) 212
Hpy166II GTNNAC 1 cut(s) 129
Hpy188I TCNGA 2 cut(s) 49, 136
Hpy188III TCNNGA 1 cut(s) 106
Hpy8I GTNNAC 1 cut(s) 129
HpyCH4V TGCA 2 cut(s) 20, 100
HpyF10VI GCNNNNNNNGC 2 cut(s) 26, 223
Hsp92II CATG 1 cut(s) 100
Kzo9I GATC 1 cut(s) 163
LmnI GCTCC 1 cut(s) 152
LpnPI CCDG 4 cut(s) 22, 38, 156, 206
MalI GATC 1 cut(s) 165
MboI GATC 1 cut(s) 163
MluCI AATT 1 cut(s) 207
MlyI GAGTC 1 cut(s) 80
MnlI CCTC 4 cut(s) 61, 102, 128, 139
MseI TTAA 1 cut(s) 92
MspI CCGG 1 cut(s) 143
MspR9I CCNGG 1 cut(s) 143
MwoI GCNNNNNNNGC 2 cut(s) 26, 223
NciI CCSGG 1 cut(s) 143
NdeII GATC 1 cut(s) 163
NlaIII CATG 1 cut(s) 100
PfeI GAWTC 1 cut(s) 181
PfoI TCCNGGA 1 cut(s) 141
PleI GAGTC 1 cut(s) 79
PpsI GAGTC 1 cut(s) 79
SaqAI TTAA 1 cut(s) 92
Sau3AI GATC 1 cut(s) 163
SchI GAGTC 1 cut(s) 80
ScrFI CCNGG 1 cut(s) 143
SetI ASST 5 cut(s) 43, 54, 92, 120, 202
SmlI CTYRAG 1 cut(s) 106
SmoI CTYRAG 1 cut(s) 106
Sse9I AATT 1 cut(s) 207
StyD4I CCNGG 1 cut(s) 141
TaqI TCGA 1 cut(s) 179
TasI AATT 1 cut(s) 207
TfiI GAWTC 1 cut(s) 181
Tru1I TTAA 1 cut(s) 92
Tru9I TTAA 1 cut(s) 92
TspDTI ATGAA 1 cut(s) 51
XapI RAATTY 1 cut(s) 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.