pycom10g17350

BOI-related E3 ubiquitin-protein ligase 3

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
20554782 .. 20556055
1274 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g17350.3

Sequence Viewer

Length: 1026 bp
ATGGCTGTTGAAGCCCGGCATCTCAATCTTTTTCCATCCCAACTCATACCCAACAGGGAAATGATGAACCAGATTCAAGGGAACTCGAATCTTTACAATACTCAGATTGGTTACGGAGTGCCGTTATCCACCGGAGGAGTGGCGGGGGAGGCTCTGCTGCCGACGTACAACTCCGTGATCGCCGATTCTATAATGCCGCCGAAGACTTCCGCCATGAAATCCGACAGCGGCCTCACCTACAACGTTCCGATCACTCTCCCGAGAAAGCGGTCCAGAGACTCGATTGGCAACGGCATCAGCCCTTCGTTTTCGCACCCGACTCCACCGTTAACCAACTACAAGAACTGCGGGGCTTTCTCTTTTCTCGGCGAGGACATTTCTCTGCACGTGCAGCAGCAGCAGTTCGACGTCGACCGTCTCATTTCCCAACATATGGAGAAGGTGAGATTGGAGGTCGAGGAGAAGAGGAATCGGCAGGCGCGGCGGATAATAGATGCCATTGAGGTGGGGGTGGTGAAACGGCTGAGGGCAAAAGAGGAAGAAATTCAGAAAATTGGGAAGCTGAACTGGGCGCTGGAAGAGCGGGTCAAGTCGTTGTGCATGGAGAATCAAATATGGCGCGACCTCGCTCAGACCAACGAGGCCACCGCCAATGCCCTCCGCACCAACCTCGAGCAGGTCCTGGCACACCAGGCCAAGGACGACGACAACAACCAAAACGACGCCAACGCCACCGCGCTCATGGACGACGCCCAGTCATGCTGCGGAAGCAGCGGAGGCGACGAAGGCCGAAACGACGGAGTCGTGGGGTTAGATGGGTGGCGCACGGTGAAGGGTACTACTAGTACAAATGGTACGGAGGGTCCTGGCGGGGAGGAAGGTACAAGCGGGGGATGCAGGTCGAGTACAAGTAGGTGGTGCAGGAGTTGCGGGACGGAGGAGGCCTGCGTGTTGCTTTTGCCCTGTAGGCACCTTTGTTTGTGTACGGTGTGCGGATCGATCGCTGCACACTTGCCCCATCTGTAA

Protein Analysis

342

Amino Acids

37.19

Weight (kDa)

5.94

Isoelectric Point (pI)

45.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 411
Acc36I ACCTGC 2 cut(s) 667, 888
AccB1I GGYRCC 1 cut(s) 969
AccB7I CCANNNNNTGG 1 cut(s) 433
AccBSI CCGCTC 1 cut(s) 583
AccI GTMKAC 1 cut(s) 411
AccII CGCG 3 cut(s) 481, 621, 737
AclI AACGTT 1 cut(s) 243
AclWI GGATC 1 cut(s) 1003
AcsI RAATTY 1 cut(s) 543
AcvI CACGTG 1 cut(s) 388
AcyI GRCGYC 3 cut(s) 408, 723, 750
AfaI GTAC 7 cut(s) 167, 838, 847, 856, 883, 907, 985
AfiI CCNNNNNNNGG 3 cut(s) 433, 676, 697
AgsI TTSAA 2 cut(s) 11, 77
AhdI GACNNNNNGTC 1 cut(s) 754
AhlI ACTAGT 1 cut(s) 842
AjnI CCWGG 3 cut(s) 681, 690, 865
AjuI GAANNNNNNNTTGG 2 cut(s) 431, 463
AluBI AGCT 1 cut(s) 562
AluI AGCT 1 cut(s) 562
Alw26I GTCTC 2 cut(s) 270, 422
AlwI GGATC 1 cut(s) 1003
AlwNI CAGNNNCTG 1 cut(s) 682
Ama87I CYCGRG 2 cut(s) 259, 671
AoxI GGCC 5 cut(s) 229, 642, 693, 787, 942
ApeKI GCWGC 7 cut(s) 157, 391, 394, 397, 762, 771, 1004
ApoI RAATTY 1 cut(s) 543
Asp700I GAANNNNTTC 1 cut(s) 543
AspLEI GCGC 5 cut(s) 481, 574, 621, 739, 825
AspS9I GGNCC 3 cut(s) 270, 679, 863
AsuC2I CCSGG 1 cut(s) 16
AsuHPI GGTGA 4 cut(s) 226, 454, 526, 841
AvaI CYCGRG 2 cut(s) 259, 671
AvaII GGWCC 3 cut(s) 270, 679, 863
BanI GGYRCC 1 cut(s) 969
BbrPI CACGTG 1 cut(s) 388
BbsI GAAGAC 1 cut(s) 209
BbvCI CCTCAGC 1 cut(s) 524
BbvI GCAGC 7 cut(s) 144, 403, 406, 409, 749, 783, 991
BccI CCATC 2 cut(s) 43, 809
BceAI ACGGC 3 cut(s) 106, 307, 536
BcgI CGANNNNNNTGC 2 cut(s) 652, 686
BciT130I CCWGG 3 cut(s) 683, 692, 867
BcnI CCSGG 1 cut(s) 16
BcoDI GTCTC 2 cut(s) 270, 422
BcuI ACTAGT 1 cut(s) 842
BfaI CTAG 1 cut(s) 843
BfmI CTRYAG 1 cut(s) 964
BfoI RGCGCY 1 cut(s) 575
BfuAI ACCTGC 2 cut(s) 667, 888
BglI GCCNNNNNGGC 1 cut(s) 967
Bme1390I CCNGG 4 cut(s) 16, 683, 692, 867
Bme18I GGWCC 3 cut(s) 270, 679, 863
BmeRI GACNNNNNGTC 1 cut(s) 754
BmeT110I CYCGRG 2 cut(s) 259, 671
BmgT120I GGNCC 3 cut(s) 270, 679, 863
BmiI GGNNCC 2 cut(s) 864, 971
BmrFI CCNGG 4 cut(s) 16, 683, 692, 867
BmrI ACTGGG 2 cut(s) 577, 748
BmsI GCATC 4 cut(s) 28, 303, 484, 884
BmuI ACTGGG 2 cut(s) 577, 748
BpiI GAAGAC 1 cut(s) 209
Bpu10I CCTNAGC 1 cut(s) 524
BpuMI CCSGG 1 cut(s) 16
Bsa29I ATCGAT 1 cut(s) 998
BsaAI YACGTR 1 cut(s) 388
BsaHI GRCGYC 3 cut(s) 408, 723, 750
BsaJI CCNNGG 1 cut(s) 696
BsaWI WCCGGW 1 cut(s) 131
Bsc4I CCNNNNNNNGG 3 cut(s) 433, 676, 697
Bse1I ACTGG 2 cut(s) 572, 754
BseBI CCWGG 3 cut(s) 683, 692, 867
BseCI ATCGAT 1 cut(s) 998
BseDI CCNNGG 1 cut(s) 696
BseGI GGATG 2 cut(s) 35, 899
BseLI CCNNNNNNNGG 3 cut(s) 433, 676, 697
BseMII CTCAG 3 cut(s) 116, 515, 644
BseNI ACTGG 2 cut(s) 572, 754
BseRI GAGGAG 3 cut(s) 150, 473, 953
BseXI GCAGC 7 cut(s) 144, 403, 406, 409, 749, 783, 991
BsgI GTGCAG 4 cut(s) 368, 410, 940, 990
Bsh1236I CGCG 3 cut(s) 481, 621, 737
Bsh1285I CGRYCG 2 cut(s) 415, 1002
BshFI GGCC 5 cut(s) 231, 644, 695, 789, 944
BshNI GGYRCC 1 cut(s) 969
BshVI ATCGAT 1 cut(s) 998
BsiEI CGRYCG 2 cut(s) 415, 1002
BsiHKCI CYCGRG 2 cut(s) 259, 671
BsiSI CCGG 2 cut(s) 16, 132
BslFI GGGAC 1 cut(s) 946
BslI CCNNNNNNNGG 3 cut(s) 433, 676, 697
BsmAI GTCTC 2 cut(s) 270, 422
BsmBI CGTCTC 1 cut(s) 422
BsmFI GGGAC 1 cut(s) 946
BsnI GGCC 5 cut(s) 231, 644, 695, 789, 944
BsoBI CYCGRG 2 cut(s) 259, 671
Bsp143I GATC 4 cut(s) 177, 249, 995, 999
BspANI GGCC 5 cut(s) 231, 644, 695, 789, 944
BspCNI CTCAG 3 cut(s) 115, 516, 643
BspDI ATCGAT 1 cut(s) 998
BspFNI CGCG 3 cut(s) 481, 621, 737
BspLI GGNNCC 2 cut(s) 864, 971
BspMI ACCTGC 2 cut(s) 667, 888
BspPI GGATC 1 cut(s) 1003
BspQI GCTCTTC 1 cut(s) 573
BspT107I GGYRCC 1 cut(s) 969
BsrBI CCGCTC 1 cut(s) 583
BsrI ACTGG 2 cut(s) 572, 754
BssECI CCNNGG 1 cut(s) 696
BssMI GATC 4 cut(s) 177, 249, 995, 999
BssNI GRCGYC 3 cut(s) 408, 723, 750
BssT1I CCWWGG 1 cut(s) 696
Bst2UI CCWGG 3 cut(s) 683, 692, 867
Bst4CI ACNGT 4 cut(s) 327, 416, 829, 988
Bst6I CTCTTC 2 cut(s) 458, 573
BstACI GRCGYC 3 cut(s) 408, 723, 750
BstAPI GCANNNNNTGC 1 cut(s) 927
BstBAI YACGTR 1 cut(s) 388
BstC8I GCNNGC 2 cut(s) 477, 946
BstDEI CTNAG 3 cut(s) 102, 524, 630
BstENI CCTNNNNNAGG 1 cut(s) 674
BstF5I GGATG 2 cut(s) 35, 899
BstFNI CGCG 3 cut(s) 481, 621, 737
BstH2I RGCGCY 1 cut(s) 575
BstHHI GCGC 5 cut(s) 481, 574, 621, 739, 825
BstKTI GATC 4 cut(s) 180, 252, 998, 1002
BstMAI GTCTC 2 cut(s) 270, 422
BstMBI GATC 4 cut(s) 177, 249, 995, 999
BstMCI CGRYCG 2 cut(s) 415, 1002
BstNI CCWGG 3 cut(s) 683, 692, 867
BstSCI CCNGG 4 cut(s) 14, 681, 690, 865
BstSFI CTRYAG 1 cut(s) 964
BstUI CGCG 3 cut(s) 481, 621, 737
BstV1I GCAGC 7 cut(s) 144, 403, 406, 409, 749, 783, 991
BstV2I GAAGAC 1 cut(s) 209
BstXI CCANNNNNNTGG 1 cut(s) 505
Bsu15I ATCGAT 1 cut(s) 998
BsuRI GGCC 5 cut(s) 231, 644, 695, 789, 944
BsuTUI ATCGAT 1 cut(s) 998
BtsCI GGATG 2 cut(s) 35, 899
BveI ACCTGC 2 cut(s) 667, 888
Cac8I GCNNGC 2 cut(s) 477, 946
CaiI CAGNNNCTG 1 cut(s) 682
CfoI GCGC 5 cut(s) 481, 574, 621, 739, 825
Cfr13I GGNCC 3 cut(s) 270, 679, 863
ClaI ATCGAT 1 cut(s) 998
CseI GACGC 2 cut(s) 731, 758
Csp6I GTAC 7 cut(s) 166, 837, 846, 855, 882, 906, 984
CviAII CATG 4 cut(s) 214, 601, 742, 759
CviQI GTAC 7 cut(s) 166, 837, 846, 855, 882, 906, 984
DdeI CTNAG 3 cut(s) 102, 524, 630
DpnI GATC 4 cut(s) 179, 251, 997, 1001
DpnII GATC 4 cut(s) 177, 249, 995, 999
DriI GACNNNNNGTC 1 cut(s) 754
Eam1104I CTCTTC 2 cut(s) 458, 573
Eam1105I GACNNNNNGTC 1 cut(s) 754
EarI CTCTTC 2 cut(s) 458, 573
EciI GGCGGA 2 cut(s) 199, 499
Eco130I CCWWGG 1 cut(s) 696
Eco147I AGGCCT 1 cut(s) 944
Eco47I GGWCC 3 cut(s) 270, 679, 863
Eco72I CACGTG 1 cut(s) 388
Eco88I CYCGRG 2 cut(s) 259, 671
EcoNI CCTNNNNNAGG 1 cut(s) 674
EcoO109I RGGNCCY 2 cut(s) 679, 863
EcoRII CCWGG 3 cut(s) 681, 690, 865
EcoT14I CCWWGG 1 cut(s) 696
ErhI CCWWGG 1 cut(s) 696
Esp3I CGTCTC 1 cut(s) 422
FaeI CATG 4 cut(s) 217, 604, 745, 762
FaiI YATR 9 cut(s) 47, 191, 215, 432, 434, 602, 616, 743, 760
FaqI GGGAC 1 cut(s) 946
FatI CATG 4 cut(s) 213, 600, 741, 758
FauI CCCGC 6 cut(s) 136, 341, 576, 863, 881, 923
FauNDI CATATG 1 cut(s) 432
FblI GTMKAC 1 cut(s) 411
FokI GGATG 2 cut(s) 22, 906
FspBI CTAG 1 cut(s) 843
GlaI GCGC 5 cut(s) 480, 573, 620, 738, 824
HaeII RGCGCY 1 cut(s) 575
HaeIII GGCC 5 cut(s) 231, 644, 695, 789, 944
HapII CCGG 2 cut(s) 16, 132
HgaI GACGC 2 cut(s) 731, 758
HhaI GCGC 5 cut(s) 481, 574, 621, 739, 825
Hin1I GRCGYC 3 cut(s) 408, 723, 750
Hin1II CATG 4 cut(s) 217, 604, 745, 762
Hin6I GCGC 5 cut(s) 479, 572, 619, 737, 823
HinP1I GCGC 5 cut(s) 479, 572, 619, 737, 823
HincII GTYRAC 2 cut(s) 330, 412
HindII GTYRAC 2 cut(s) 330, 412
HinfI GANTC 8 cut(s) 73, 88, 185, 278, 319, 469, 607, 801
HpaI GTTAAC 1 cut(s) 330
HpaII CCGG 2 cut(s) 16, 132
HphI GGTGA 4 cut(s) 226, 454, 526, 841
Hpy166II GTNNAC 3 cut(s) 330, 412, 984
Hpy188I TCNGA 5 cut(s) 105, 223, 249, 549, 633
Hpy188III TCNNGA 2 cut(s) 259, 273
Hpy8I GTNNAC 3 cut(s) 330, 412, 984
Hpy99I CGWCG 8 cut(s) 166, 410, 413, 707, 725, 752, 785, 800
HpyAV CCTTC 5 cut(s) 312, 433, 779, 826, 872
HpyCH4III ACNGT 4 cut(s) 327, 416, 829, 988
HpyCH4IV ACGT 4 cut(s) 164, 243, 387, 408
HpyCH4V TGCA 6 cut(s) 385, 391, 600, 897, 921, 1007
HpyF3I CTNAG 3 cut(s) 102, 524, 630
HpySE526I ACGT 4 cut(s) 164, 243, 387, 408
Hsp92I GRCGYC 3 cut(s) 408, 723, 750
Hsp92II CATG 4 cut(s) 217, 604, 745, 762
HspAI GCGC 5 cut(s) 479, 572, 619, 737, 823
KspAI GTTAAC 1 cut(s) 330
Kzo9I GATC 4 cut(s) 177, 249, 995, 999
LguI GCTCTTC 1 cut(s) 573
Lsp1109I GCAGC 7 cut(s) 144, 403, 406, 409, 749, 783, 991
LweI GCATC 4 cut(s) 28, 303, 484, 884
MaeI CTAG 1 cut(s) 843
MaeII ACGT 4 cut(s) 164, 243, 387, 408
MaeIII GTNAC 1 cut(s) 110
MalI GATC 4 cut(s) 179, 251, 997, 1001
MbiI CCGCTC 1 cut(s) 583
MboI GATC 4 cut(s) 177, 249, 995, 999
MboII GAAGA 4 cut(s) 214, 475, 551, 590
MluCI AATT 2 cut(s) 543, 552
MlyI GAGTC 3 cut(s) 272, 313, 810
MmeI TCCRAC 1 cut(s) 246
MroXI GAANNNNTTC 1 cut(s) 543
MseI TTAA 1 cut(s) 329
MslI CAYNNNNRTG 1 cut(s) 503
MspA1I CMGCKG 2 cut(s) 228, 774
MspI CCGG 2 cut(s) 16, 132
MspR9I CCNGG 4 cut(s) 16, 683, 692, 867
MvaI CCWGG 3 cut(s) 683, 692, 867
MvnI CGCG 3 cut(s) 481, 621, 737
NciI CCSGG 1 cut(s) 16
NdeI CATATG 1 cut(s) 432
NdeII GATC 4 cut(s) 177, 249, 995, 999
NlaIII CATG 4 cut(s) 217, 604, 745, 762
NlaIV GGNNCC 2 cut(s) 864, 971
NmeAIII GCCGAG 1 cut(s) 345
PaeR7I CTCGAG 1 cut(s) 671
PceI AGGCCT 1 cut(s) 944
PciSI GCTCTTC 1 cut(s) 573
PcsI WCGNNNNNNNCGW 1 cut(s) 801
PdmI GAANNNNTTC 1 cut(s) 543
PfeI GAWTC 5 cut(s) 73, 88, 185, 469, 607
PflFI GACNNNGTC 1 cut(s) 800
PflMI CCANNNNNTGG 1 cut(s) 433
Ple19I CGATCG 1 cut(s) 1002
PleI GAGTC 3 cut(s) 272, 313, 809
PmaCI CACGTG 1 cut(s) 388
PmlI CACGTG 1 cut(s) 388
PpsI GAGTC 3 cut(s) 272, 313, 809
Ppu21I YACGTR 1 cut(s) 388
PpuMI RGGWCCY 2 cut(s) 679, 863
Psp1406I AACGTT 1 cut(s) 243
Psp5II RGGWCCY 2 cut(s) 679, 863
Psp6I CCWGG 3 cut(s) 681, 690, 865
PspCI CACGTG 1 cut(s) 388
PspGI CCWGG 3 cut(s) 681, 690, 865
PspN4I GGNNCC 2 cut(s) 864, 971
PspPI GGNCC 3 cut(s) 270, 679, 863
PspPPI RGGWCCY 2 cut(s) 679, 863
PspXI VCTCGAGB 1 cut(s) 671
PstNI CAGNNNCTG 1 cut(s) 682
PsyI GACNNNGTC 1 cut(s) 800
PvuI CGATCG 1 cut(s) 1002
RsaI GTAC 7 cut(s) 167, 838, 847, 856, 883, 907, 985
RsaNI GTAC 7 cut(s) 166, 837, 846, 855, 882, 906, 984
RseI CAYNNNNRTG 1 cut(s) 503
SalI GTCGAC 1 cut(s) 410
SapI GCTCTTC 1 cut(s) 573
SaqAI TTAA 1 cut(s) 329
Sau3AI GATC 4 cut(s) 177, 249, 995, 999
Sau96I GGNCC 3 cut(s) 270, 679, 863
SchI GAGTC 3 cut(s) 272, 313, 810
ScrFI CCNGG 4 cut(s) 16, 683, 692, 867
SfaNI GCATC 4 cut(s) 28, 303, 484, 884
SfcI CTRYAG 1 cut(s) 964
Sfr274I CTCGAG 1 cut(s) 671
SinI GGWCC 3 cut(s) 270, 679, 863
SlaI CTCGAG 1 cut(s) 671
SmiMI CAYNNNNRTG 1 cut(s) 503
SmlI CTYRAG 1 cut(s) 671
SmoI CTYRAG 1 cut(s) 671
SpeI ACTAGT 1 cut(s) 842
Sse9I AATT 2 cut(s) 543, 552
SseBI AGGCCT 1 cut(s) 944
SspMI CTAG 1 cut(s) 843
StuI AGGCCT 1 cut(s) 944
StyD4I CCNGG 4 cut(s) 14, 681, 690, 865
StyI CCWWGG 1 cut(s) 696
TaaI ACNGT 4 cut(s) 327, 416, 829, 988
TaiI ACGT 4 cut(s) 167, 246, 390, 411
TaqI TCGA 8 cut(s) 86, 281, 405, 411, 456, 672, 902, 998
TasI AATT 2 cut(s) 543, 552
TatI WGTACW 2 cut(s) 845, 905
TauI GCSGC 3 cut(s) 199, 231, 484
TfiI GAWTC 5 cut(s) 73, 88, 185, 469, 607
Tru1I TTAA 1 cut(s) 329
Tru9I TTAA 1 cut(s) 329
TseI GCWGC 7 cut(s) 157, 391, 394, 397, 762, 771, 1004
TspDTI ATGAA 2 cut(s) 80, 230
TspGWI ACGGA 5 cut(s) 129, 163, 813, 872, 950
Tth111I GACNNNGTC 1 cut(s) 800
Van91I CCANNNNNTGG 1 cut(s) 433
VpaK11BI GGWCC 3 cut(s) 270, 679, 863
XagI CCTNNNNNAGG 1 cut(s) 674
XapI RAATTY 1 cut(s) 543
XcmI CCANNNNNNNNNTGG 2 cut(s) 136, 739
XhoI CTCGAG 1 cut(s) 671
XmiI GTMKAC 1 cut(s) 411
XmnI GAANNNNTTC 1 cut(s) 543
XspI CTAG 1 cut(s) 843
ZraI GACGTC 1 cut(s) 409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.