Elongation factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G56070 AT1G56070 AT1G56070 AT3G12915 |
| fragaria_vesca | FvH4_3g15630 FvH4_3g15640 |
| malus_domestica | MD05G1220800.v1.1 MD05G1221000.v1.1 MD10G1203200.v1.1 MD10G1203300.v1.1 |
| prunus_persica | Prupe.4G138700_v2.0.a1 Prupe.4G138700_v2.0.a1 Prupe.4G138700_v2.0.a1 Prupe.4G138700_v2.0.a1 Prupe.4G138900_v2.0.a1 Prupe.4G138900_v2.0.a1 Prupe.4G138900_v2.0.a1 Prupe.4G141700_v2.0.a1 |
| pyrus_communis | pycom05g20420 pycom05g20430 pycom10g17380 pycom10g17390 |
| rosa_chinensis | RchiOBHm_Chr5g0026251 RchiOBHm_Chr5g0026301 RchiOBHm_Chr6g0257391 |
| rosa_laevigata | RLG00000032918 RLG00000032921 |
| rosa_multiflora | Rmu_sc0000632.1_g000007 Rmu_sc0009978.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00053060 Rroxscaffold_3G00244570 |
| rosa_rugosa | Rorug05G0091900 Rorug05G0092100 Rorug07G0150400 |
| rosa_samantha | Rh5AG184900 Rh5BG181800 Rh5BG182000 Rh5CG201000 Rh5CG201300 Rh5DG183500 Rh5DG183800 Rh7BG278900 Rh7BG279100 |
| rosa_wichuraiana | Rw5G016770 Rw5G016800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 884 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 250 |
| Acc16I | TGCGCA | 1 cut(s) | 78 |
| Acc36I | ACCTGC | 2 cut(s) | 827, 884 |
| Acc65I | GGTACC | 1 cut(s) | 1065 |
| AccB1I | GGYRCC | 1 cut(s) | 1065 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 611, 789 |
| AccI | GTMKAC | 2 cut(s) | 84, 627 |
| AciI | CCGC | 2 cut(s) | 1176, 1365 |
| AclWI | GGATC | 4 cut(s) | 458, 596, 1392, 1401 |
| AcoI | YGGCCR | 1 cut(s) | 1207 |
| AcsI | RAATTY | 2 cut(s) | 1078, 1264 |
| AcuI | CTGAAG | 1 cut(s) | 360 |
| AdeI | CACNNNGTG | 1 cut(s) | 469 |
| AfaI | GTAC | 4 cut(s) | 266, 293, 1067, 1308 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 169, 611, 638, 789 |
| AgeI | ACCGGT | 1 cut(s) | 218 |
| AgsI | TTSAA | 1 cut(s) | 1243 |
| AjiI | CACGTC | 1 cut(s) | 82 |
| AjnI | CCWGG | 4 cut(s) | 316, 522, 992, 1273 |
| AluBI | AGCT | 8 cut(s) | 25, 191, 350, 520, 659, 779, 922, 1004 |
| AluI | AGCT | 8 cut(s) | 25, 191, 350, 520, 659, 779, 922, 1004 |
| Alw21I | GWGCWC | 4 cut(s) | 27, 376, 429, 522 |
| Alw26I | GTCTC | 2 cut(s) | 413, 1330 |
| Alw44I | GTGCAC | 1 cut(s) | 372 |
| AlwI | GGATC | 4 cut(s) | 458, 596, 1392, 1401 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1128 |
| AoxI | GGCC | 3 cut(s) | 476, 905, 1207 |
| ApaLI | GTGCAC | 1 cut(s) | 372 |
| ApeKI | GCWGC | 3 cut(s) | 122, 125, 350 |
| ApoI | RAATTY | 2 cut(s) | 1078, 1264 |
| AsiGI | ACCGGT | 1 cut(s) | 218 |
| Asp718I | GGTACC | 1 cut(s) | 1065 |
| AspLEI | GCGC | 2 cut(s) | 79, 970 |
| AspS9I | GGNCC | 6 cut(s) | 792, 906, 952, 1091, 1142, 1259 |
| AsuHPI | GGTGA | 7 cut(s) | 16, 167, 626, 770, 922, 1028, 1413 |
| AsuNHI | GCTAGC | 1 cut(s) | 1004 |
| AvaII | GGWCC | 5 cut(s) | 792, 952, 1091, 1142, 1259 |
| BaeGI | GKGCMC | 1 cut(s) | 376 |
| BanI | GGYRCC | 1 cut(s) | 1065 |
| BanII | GRGCYC | 3 cut(s) | 27, 522, 855 |
| Bbv12I | GWGCWC | 4 cut(s) | 27, 376, 429, 522 |
| BbvI | GCAGC | 3 cut(s) | 109, 112, 337 |
| BccI | CCATC | 9 cut(s) | 362, 493, 524, 736, 863, 952, 1051, 1127, 1321 |
| BceAI | ACGGC | 2 cut(s) | 1071, 1194 |
| BciT130I | CCWGG | 4 cut(s) | 318, 524, 994, 1275 |
| BciVI | GTATCC | 1 cut(s) | 166 |
| BclI | TGATCA | 2 cut(s) | 886, 1102 |
| BcoDI | GTCTC | 2 cut(s) | 413, 1330 |
| BfaI | CTAG | 1 cut(s) | 1005 |
| BfoI | RGCGCY | 1 cut(s) | 971 |
| BfuAI | ACCTGC | 2 cut(s) | 827, 884 |
| BfuI | GTATCC | 1 cut(s) | 166 |
| BisI | GCNGC | 3 cut(s) | 123, 126, 351 |
| BlpI | GCTNAGC | 1 cut(s) | 192 |
| BlsI | GCNGC | 3 cut(s) | 124, 127, 352 |
| Bme1390I | CCNGG | 4 cut(s) | 318, 524, 994, 1275 |
| Bme18I | GGWCC | 5 cut(s) | 792, 952, 1091, 1142, 1259 |
| BmgBI | CACGTC | 1 cut(s) | 82 |
| BmgT120I | GGNCC | 6 cut(s) | 792, 906, 952, 1091, 1142, 1259 |
| BmiI | GGNNCC | 4 cut(s) | 1067, 1092, 1093, 1260 |
| BmrFI | CCNGG | 4 cut(s) | 318, 524, 994, 1275 |
| BmtI | GCTAGC | 1 cut(s) | 1008 |
| BpmI | CTGGAG | 2 cut(s) | 506, 1296 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 192 |
| BpuEI | CTTGAG | 1 cut(s) | 536 |
| Bsa29I | ATCGAT | 2 cut(s) | 453, 1396 |
| BsaJI | CCNNGG | 6 cut(s) | 88, 316, 317, 438, 1053, 1380 |
| BsaWI | WCCGGW | 2 cut(s) | 218, 806 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 169, 611, 638, 789 |
| Bse118I | RCCGGY | 1 cut(s) | 218 |
| Bse3DI | GCAATG | 1 cut(s) | 135 |
| BseBI | CCWGG | 4 cut(s) | 318, 524, 994, 1275 |
| BseCI | ATCGAT | 2 cut(s) | 453, 1396 |
| BseDI | CCNNGG | 6 cut(s) | 88, 316, 317, 438, 1053, 1380 |
| BseGI | GGATG | 2 cut(s) | 1332, 1360 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 169, 611, 638, 789 |
| BseMI | GCAATG | 1 cut(s) | 135 |
| BseMII | CTCAG | 3 cut(s) | 183, 408, 669 |
| BseRI | GAGGAG | 2 cut(s) | 35, 551 |
| BseSI | GKGCMC | 1 cut(s) | 376 |
| BseXI | GCAGC | 3 cut(s) | 109, 112, 337 |
| BseYI | CCCAGC | 1 cut(s) | 775 |
| BshFI | GGCC | 3 cut(s) | 478, 907, 1209 |
| BshNI | GGYRCC | 1 cut(s) | 1065 |
| BshTI | ACCGGT | 1 cut(s) | 218 |
| BshVI | ATCGAT | 2 cut(s) | 453, 1396 |
| BsiHKAI | GWGCWC | 4 cut(s) | 27, 376, 429, 522 |
| BsiSI | CCGG | 2 cut(s) | 219, 807 |
| BslFI | GGGAC | 1 cut(s) | 1077 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 169, 611, 638, 789 |
| BsmAI | GTCTC | 2 cut(s) | 413, 1330 |
| BsmFI | GGGAC | 1 cut(s) | 1077 |
| BsmI | GAATGC | 2 cut(s) | 577, 1434 |
| BsnI | GGCC | 3 cut(s) | 478, 907, 1209 |
| Bsp1286I | GDGCHC | 5 cut(s) | 27, 376, 429, 522, 855 |
| Bsp1407I | TGTACA | 1 cut(s) | 1306 |
| Bsp143I | GATC | 9 cut(s) | 450, 454, 601, 864, 886, 1029, 1102, 1393, 1397 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 192 |
| Bsp19I | CCATGG | 1 cut(s) | 88 |
| BspACI | CCGC | 2 cut(s) | 1176, 1365 |
| BspANI | GGCC | 3 cut(s) | 478, 907, 1209 |
| BspCNI | CTCAG | 3 cut(s) | 184, 409, 668 |
| BspDI | ATCGAT | 2 cut(s) | 453, 1396 |
| BspLI | GGNNCC | 4 cut(s) | 1067, 1092, 1093, 1260 |
| BspMI | ACCTGC | 2 cut(s) | 827, 884 |
| BspOI | GCTAGC | 1 cut(s) | 1008 |
| BspPI | GGATC | 4 cut(s) | 458, 596, 1392, 1401 |
| BspT107I | GGYRCC | 1 cut(s) | 1065 |
| BsrDI | GCAATG | 1 cut(s) | 135 |
| BsrFI | RCCGGY | 1 cut(s) | 218 |
| BsrGI | TGTACA | 1 cut(s) | 1306 |
| BssAI | RCCGGY | 1 cut(s) | 218 |
| BssECI | CCNNGG | 6 cut(s) | 88, 316, 317, 438, 1053, 1380 |
| BssMI | GATC | 9 cut(s) | 450, 454, 601, 864, 886, 1029, 1102, 1393, 1397 |
| BssT1I | CCWWGG | 3 cut(s) | 88, 438, 1380 |
| Bst2UI | CCWGG | 4 cut(s) | 318, 524, 994, 1275 |
| Bst4CI | ACNGT | 9 cut(s) | 424, 490, 646, 671, 1070, 1130, 1318, 1348, 1375 |
| Bst6I | CTCTTC | 1 cut(s) | 932 |
| BstAUI | TGTACA | 1 cut(s) | 1306 |
| BstC8I | GCNNGC | 2 cut(s) | 824, 1006 |
| BstDEI | CTNAG | 5 cut(s) | 192, 417, 655, 699, 1164 |
| BstDSI | CCRYGG | 2 cut(s) | 88, 1053 |
| BstF5I | GGATG | 2 cut(s) | 1332, 1360 |
| BstH2I | RGCGCY | 1 cut(s) | 971 |
| BstHHI | GCGC | 2 cut(s) | 79, 970 |
| BstKTI | GATC | 9 cut(s) | 453, 457, 604, 867, 889, 1032, 1105, 1396, 1400 |
| BstMAI | GTCTC | 2 cut(s) | 413, 1330 |
| BstMBI | GATC | 9 cut(s) | 450, 454, 601, 864, 886, 1029, 1102, 1393, 1397 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 188, 656, 859, 976, 985, 994, 1010 |
| BstNI | CCWGG | 4 cut(s) | 318, 524, 994, 1275 |
| BstNSI | RCATGY | 1 cut(s) | 326 |
| BstSCI | CCNGG | 4 cut(s) | 316, 522, 992, 1273 |
| BstSLI | GKGCMC | 1 cut(s) | 376 |
| BstV1I | GCAGC | 3 cut(s) | 109, 112, 337 |
| BstX2I | RGATCY | 1 cut(s) | 601 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 530 |
| BstYI | RGATCY | 1 cut(s) | 601 |
| Bsu15I | ATCGAT | 2 cut(s) | 453, 1396 |
| BsuI | GTATCC | 1 cut(s) | 166 |
| BsuRI | GGCC | 3 cut(s) | 478, 907, 1209 |
| BsuTUI | ATCGAT | 2 cut(s) | 453, 1396 |
| BtgI | CCRYGG | 2 cut(s) | 88, 1053 |
| BtrI | CACGTC | 1 cut(s) | 82 |
| BtsCI | GGATG | 2 cut(s) | 1332, 1360 |
| BtsI | GCAGTG | 1 cut(s) | 1008 |
| BtsIMutI | CAGTG | 2 cut(s) | 1008, 1371 |
| BveI | ACCTGC | 2 cut(s) | 827, 884 |
| Cac8I | GCNNGC | 2 cut(s) | 824, 1006 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1128 |
| CfoI | GCGC | 2 cut(s) | 79, 970 |
| Cfr10I | RCCGGY | 1 cut(s) | 218 |
| Cfr13I | GGNCC | 6 cut(s) | 792, 906, 952, 1091, 1142, 1259 |
| ClaI | ATCGAT | 2 cut(s) | 453, 1396 |
| Csp6I | GTAC | 4 cut(s) | 265, 292, 1066, 1307 |
| CspAI | ACCGGT | 1 cut(s) | 218 |
| CviAII | CATG | 6 cut(s) | 89, 323, 880, 910, 934, 1255 |
| CviQI | GTAC | 4 cut(s) | 265, 292, 1066, 1307 |
| DdeI | CTNAG | 5 cut(s) | 192, 417, 655, 699, 1164 |
| DpnI | GATC | 9 cut(s) | 452, 456, 603, 866, 888, 1031, 1104, 1395, 1399 |
| DpnII | GATC | 9 cut(s) | 450, 454, 601, 864, 886, 1029, 1102, 1393, 1397 |
| DraIII | CACNNNGTG | 1 cut(s) | 469 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 250 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 250 |
| EaeI | YGGCCR | 1 cut(s) | 1207 |
| Eam1104I | CTCTTC | 1 cut(s) | 932 |
| EarI | CTCTTC | 1 cut(s) | 932 |
| Ecl136II | GAGCTC | 2 cut(s) | 25, 520 |
| Eco130I | CCWWGG | 3 cut(s) | 88, 438, 1380 |
| Eco147I | AGGCCT | 1 cut(s) | 478 |
| Eco24I | GRGCYC | 3 cut(s) | 27, 522, 855 |
| Eco47I | GGWCC | 5 cut(s) | 792, 952, 1091, 1142, 1259 |
| Eco53kI | GAGCTC | 2 cut(s) | 25, 520 |
| Eco57I | CTGAAG | 1 cut(s) | 360 |
| EcoICRI | GAGCTC | 2 cut(s) | 25, 520 |
| EcoO109I | RGGNCCY | 3 cut(s) | 952, 1091, 1142 |
| EcoRII | CCWGG | 4 cut(s) | 316, 522, 992, 1273 |
| EcoT14I | CCWWGG | 3 cut(s) | 88, 438, 1380 |
| EcoT38I | GRGCYC | 3 cut(s) | 27, 522, 855 |
| ErhI | CCWWGG | 3 cut(s) | 88, 438, 1380 |
| FaeI | CATG | 6 cut(s) | 92, 326, 883, 913, 937, 1258 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 591, 623, 1131, 1163 |
| FaqI | GGGAC | 1 cut(s) | 1077 |
| FatI | CATG | 6 cut(s) | 88, 322, 879, 909, 933, 1254 |
| FauI | CCCGC | 1 cut(s) | 1183 |
| FauNDI | CATATG | 1 cut(s) | 595 |
| FbaI | TGATCA | 2 cut(s) | 886, 1102 |
| FblI | GTMKAC | 2 cut(s) | 84, 627 |
| Fnu4HI | GCNGC | 3 cut(s) | 123, 126, 351 |
| FokI | GGATG | 2 cut(s) | 1339, 1367 |
| FriOI | GRGCYC | 3 cut(s) | 27, 522, 855 |
| Fsp4HI | GCNGC | 3 cut(s) | 123, 126, 351 |
| FspBI | CTAG | 1 cut(s) | 1005 |
| FspI | TGCGCA | 1 cut(s) | 78 |
| GlaI | GCGC | 2 cut(s) | 78, 969 |
| GluI | GCNGC | 3 cut(s) | 123, 126, 351 |
| GsaI | CCCAGC | 1 cut(s) | 779 |
| GsuI | CTGGAG | 2 cut(s) | 506, 1296 |
| HaeII | RGCGCY | 1 cut(s) | 971 |
| HaeIII | GGCC | 3 cut(s) | 478, 907, 1209 |
| HapII | CCGG | 2 cut(s) | 219, 807 |
| HhaI | GCGC | 2 cut(s) | 79, 970 |
| Hin1II | CATG | 6 cut(s) | 92, 326, 883, 913, 937, 1258 |
| Hin6I | GCGC | 2 cut(s) | 77, 968 |
| HinP1I | GCGC | 2 cut(s) | 77, 968 |
| HincII | GTYRAC | 5 cut(s) | 85, 99, 328, 493, 915 |
| HindII | GTYRAC | 5 cut(s) | 85, 99, 328, 493, 915 |
| HindIII | AAGCTT | 1 cut(s) | 920 |
| HinfI | GANTC | 7 cut(s) | 110, 251, 311, 731, 1171, 1194, 1251 |
| HpaI | GTTAAC | 1 cut(s) | 493 |
| HpaII | CCGG | 2 cut(s) | 219, 807 |
| HphI | GGTGA | 7 cut(s) | 16, 167, 626, 770, 922, 1028, 1413 |
| Hpy166II | GTNNAC | 8 cut(s) | 12, 85, 99, 328, 374, 493, 628, 915 |
| Hpy188I | TCNGA | 6 cut(s) | 340, 414, 687, 891, 1183, 1233 |
| Hpy188III | TCNNGA | 2 cut(s) | 1123, 1300 |
| Hpy8I | GTNNAC | 8 cut(s) | 12, 85, 99, 328, 374, 493, 628, 915 |
| Hpy99I | CGWCG | 1 cut(s) | 86 |
| HpyCH4III | ACNGT | 9 cut(s) | 424, 490, 646, 671, 1070, 1130, 1318, 1348, 1375 |
| HpyCH4IV | ACGT | 1 cut(s) | 81 |
| HpyCH4V | TGCA | 8 cut(s) | 140, 259, 374, 667, 815, 822, 879, 988 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 188, 656, 859, 976, 985, 994, 1010 |
| HpyF3I | CTNAG | 5 cut(s) | 192, 417, 655, 699, 1164 |
| HpySE526I | ACGT | 1 cut(s) | 81 |
| Hsp92II | CATG | 6 cut(s) | 92, 326, 883, 913, 937, 1258 |
| HspAI | GCGC | 2 cut(s) | 77, 968 |
| KflI | GGGWCCC | 1 cut(s) | 1091 |
| KpnI | GGTACC | 1 cut(s) | 1069 |
| Ksp22I | TGATCA | 2 cut(s) | 886, 1102 |
| KspAI | GTTAAC | 1 cut(s) | 493 |
| Kzo9I | GATC | 9 cut(s) | 450, 454, 601, 864, 886, 1029, 1102, 1393, 1397 |
| LmnI | GCTCC | 4 cut(s) | 22, 30, 432, 525 |
| Lsp1109I | GCAGC | 3 cut(s) | 109, 112, 337 |
| MaeI | CTAG | 1 cut(s) | 1005 |
| MaeII | ACGT | 1 cut(s) | 81 |
| MaeIII | GTNAC | 4 cut(s) | 343, 928, 1130, 1367 |
| MalI | GATC | 9 cut(s) | 452, 456, 603, 866, 888, 1031, 1104, 1395, 1399 |
| MboI | GATC | 9 cut(s) | 450, 454, 601, 864, 886, 1029, 1102, 1393, 1397 |
| MboII | GAAGA | 3 cut(s) | 611, 949, 1294 |
| MflI | RGATCY | 1 cut(s) | 601 |
| MhlI | GDGCHC | 5 cut(s) | 27, 376, 429, 522, 855 |
| MluCI | AATT | 3 cut(s) | 207, 1078, 1264 |
| MlyI | GAGTC | 3 cut(s) | 104, 260, 740 |
| MseI | TTAA | 4 cut(s) | 210, 492, 1412, 1438 |
| MslI | CAYNNNNRTG | 1 cut(s) | 878 |
| MspA1I | CMGCKG | 2 cut(s) | 350, 659 |
| MspI | CCGG | 2 cut(s) | 219, 807 |
| MspR9I | CCNGG | 4 cut(s) | 318, 524, 994, 1275 |
| Mva1269I | GAATGC | 2 cut(s) | 577, 1434 |
| MvaI | CCWGG | 4 cut(s) | 318, 524, 994, 1275 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 188, 656, 859, 976, 985, 994, 1010 |
| NcoI | CCATGG | 1 cut(s) | 88 |
| NdeI | CATATG | 1 cut(s) | 595 |
| NdeII | GATC | 9 cut(s) | 450, 454, 601, 864, 886, 1029, 1102, 1393, 1397 |
| NheI | GCTAGC | 1 cut(s) | 1004 |
| NlaIII | CATG | 6 cut(s) | 92, 326, 883, 913, 937, 1258 |
| NlaIV | GGNNCC | 4 cut(s) | 1067, 1092, 1093, 1260 |
| NmuCI | GTSAC | 3 cut(s) | 343, 928, 1130 |
| NsbI | TGCGCA | 1 cut(s) | 78 |
| NspI | RCATGY | 1 cut(s) | 326 |
| PaqCI | CACCTGC | 1 cut(s) | 884 |
| PasI | CCCWGGG | 1 cut(s) | 317 |
| PceI | AGGCCT | 1 cut(s) | 478 |
| PctI | GAATGC | 2 cut(s) | 577, 1434 |
| PfeI | GAWTC | 4 cut(s) | 311, 1171, 1194, 1251 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 611, 789 |
| PfoI | TCCNGGA | 1 cut(s) | 1273 |
| PinAI | ACCGGT | 1 cut(s) | 218 |
| PkrI | GCNGC | 3 cut(s) | 124, 127, 352 |
| PleI | GAGTC | 3 cut(s) | 104, 259, 739 |
| PpsI | GAGTC | 3 cut(s) | 104, 259, 739 |
| PpuMI | RGGWCCY | 3 cut(s) | 952, 1091, 1142 |
| Psp124BI | GAGCTC | 2 cut(s) | 27, 522 |
| Psp5II | RGGWCCY | 3 cut(s) | 952, 1091, 1142 |
| Psp6I | CCWGG | 4 cut(s) | 316, 522, 992, 1273 |
| PspFI | CCCAGC | 1 cut(s) | 775 |
| PspGI | CCWGG | 4 cut(s) | 316, 522, 992, 1273 |
| PspN4I | GGNNCC | 4 cut(s) | 1067, 1092, 1093, 1260 |
| PspPI | GGNCC | 6 cut(s) | 792, 906, 952, 1091, 1142, 1259 |
| PspPPI | RGGWCCY | 3 cut(s) | 952, 1091, 1142 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1128 |
| PsuI | RGATCY | 1 cut(s) | 601 |
| PvuII | CAGCTG | 2 cut(s) | 350, 659 |
| RsaI | GTAC | 4 cut(s) | 266, 293, 1067, 1308 |
| RsaNI | GTAC | 4 cut(s) | 265, 292, 1066, 1307 |
| RseI | CAYNNNNRTG | 1 cut(s) | 878 |
| SacI | GAGCTC | 2 cut(s) | 27, 522 |
| SalI | GTCGAC | 1 cut(s) | 83 |
| SaqAI | TTAA | 4 cut(s) | 210, 492, 1412, 1438 |
| SatI | GCNGC | 3 cut(s) | 123, 126, 351 |
| Sau3AI | GATC | 9 cut(s) | 450, 454, 601, 864, 886, 1029, 1102, 1393, 1397 |
| Sau96I | GGNCC | 6 cut(s) | 792, 906, 952, 1091, 1142, 1259 |
| SchI | GAGTC | 3 cut(s) | 104, 260, 740 |
| ScrFI | CCNGG | 4 cut(s) | 318, 524, 994, 1275 |
| SduI | GDGCHC | 5 cut(s) | 27, 376, 429, 522, 855 |
| SinI | GGWCC | 5 cut(s) | 792, 952, 1091, 1142, 1259 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 878 |
| SmlI | CTYRAG | 1 cut(s) | 515 |
| SmoI | CTYRAG | 1 cut(s) | 515 |
| Sse9I | AATT | 3 cut(s) | 207, 1078, 1264 |
| SseBI | AGGCCT | 1 cut(s) | 478 |
| SsiI | CCGC | 2 cut(s) | 1176, 1365 |
| SspMI | CTAG | 1 cut(s) | 1005 |
| SstI | GAGCTC | 2 cut(s) | 27, 522 |
| StuI | AGGCCT | 1 cut(s) | 478 |
| StyD4I | CCNGG | 4 cut(s) | 316, 522, 992, 1273 |
| StyI | CCWWGG | 3 cut(s) | 88, 438, 1380 |
| TaaI | ACNGT | 9 cut(s) | 424, 490, 646, 671, 1070, 1130, 1318, 1348, 1375 |
| TaiI | ACGT | 1 cut(s) | 84 |
| TaqI | TCGA | 3 cut(s) | 84, 453, 1396 |
| TasI | AATT | 3 cut(s) | 207, 1078, 1264 |
| TatI | WGTACW | 1 cut(s) | 1306 |
| TfiI | GAWTC | 4 cut(s) | 311, 1171, 1194, 1251 |
| Tru1I | TTAA | 4 cut(s) | 210, 492, 1412, 1438 |
| Tru9I | TTAA | 4 cut(s) | 210, 492, 1412, 1438 |
| TscAI | CASTG | 2 cut(s) | 1015, 1378 |
| TseFI | GTSAC | 3 cut(s) | 343, 928, 1130 |
| TseI | GCWGC | 3 cut(s) | 122, 125, 350 |
| Tsp45I | GTSAC | 3 cut(s) | 343, 928, 1130 |
| TspDTI | ATGAA | 6 cut(s) | 201, 324, 612, 896, 950, 989 |
| TspGWI | ACGGA | 6 cut(s) | 17, 122, 152, 185, 297, 419 |
| TspRI | CASTG | 2 cut(s) | 1015, 1378 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 611, 789 |
| VneI | GTGCAC | 1 cut(s) | 372 |
| VpaK11BI | GGWCC | 5 cut(s) | 792, 952, 1091, 1142, 1259 |
| XapI | RAATTY | 2 cut(s) | 1078, 1264 |
| XceI | RCATGY | 1 cut(s) | 326 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 583 |
| XmiI | GTMKAC | 2 cut(s) | 84, 627 |
| XspI | CTAG | 1 cut(s) | 1005 |