Heavy-metal-associated domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g09921 FvH4_6g06500 |
| malus_domestica | MD04G1201300.v1.1 MD12G1213700.v1.1 |
| prunus_persica | Prupe.6G321400_v2.0.a1 Prupe.6G321400_v2.0.a1 |
| pyrus_communis | pycom04g17730 pycom12g19960 |
| rosa_chinensis | RchiOBHm_Chr3g0455651 |
| rosa_laevigata | RLG00000000137 RLG00000000144 RLG00000000152 RLG00000000192 RLG00000000428 RLG00000000490 RLG00000025343 |
| rosa_multiflora | Rmu_sc0002883.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00423630 Rroxscaffold_6G00424130 |
| rosa_rugosa | Rorug03G0009000 |
| rosa_samantha | Rh3AG068500 Rh3BG071000 Rh3CG069300 Rh3DG070900 Rh5BG485600 Rh6CG178600 Rh6DG170400 |
| rosa_wichuraiana | Rw3G005490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 830, 848 |
| AccII | CGCG | 1 cut(s) | 491 |
| AclWI | GGATC | 1 cut(s) | 841 |
| AcuI | CTGAAG | 3 cut(s) | 33, 453, 942 |
| AcvI | CACGTG | 1 cut(s) | 863 |
| AfaI | GTAC | 5 cut(s) | 552, 858, 913, 1010, 1016 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 513, 830, 848 |
| AflIII | ACRYGT | 1 cut(s) | 627 |
| AgsI | TTSAA | 6 cut(s) | 88, 139, 309, 443, 803, 1063 |
| AjnI | CCWGG | 2 cut(s) | 1019, 1079 |
| AluBI | AGCT | 8 cut(s) | 11, 17, 938, 968, 1052, 1086, 1160, 1171 |
| AluI | AGCT | 8 cut(s) | 11, 17, 938, 968, 1052, 1086, 1160, 1171 |
| Alw21I | GWGCWC | 1 cut(s) | 1173 |
| Alw26I | GTCTC | 2 cut(s) | 413, 1149 |
| AlwI | GGATC | 1 cut(s) | 841 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 209 |
| AoxI | GGCC | 7 cut(s) | 275, 761, 774, 866, 884, 919, 1068 |
| ApeKI | GCWGC | 7 cut(s) | 111, 644, 818, 1106, 1157, 1237, 1287 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 438 |
| AspLEI | GCGC | 2 cut(s) | 491, 728 |
| AspS9I | GGNCC | 6 cut(s) | 360, 761, 866, 884, 920, 1176 |
| AsuHPI | GGTGA | 5 cut(s) | 601, 616, 661, 824, 828 |
| AvaII | GGWCC | 2 cut(s) | 360, 1176 |
| AxyI | CCTNAGG | 1 cut(s) | 879 |
| BanII | GRGCYC | 1 cut(s) | 1173 |
| BbrPI | CACGTG | 1 cut(s) | 863 |
| Bbv12I | GWGCWC | 1 cut(s) | 1173 |
| BbvCI | CCTCAGC | 1 cut(s) | 510 |
| BbvI | GCAGC | 6 cut(s) | 98, 631, 805, 1093, 1169, 1249 |
| BccI | CCATC | 2 cut(s) | 143, 913 |
| BceAI | ACGGC | 2 cut(s) | 385, 1083 |
| BciT130I | CCWGG | 2 cut(s) | 1021, 1081 |
| BciVI | GTATCC | 1 cut(s) | 1206 |
| BclI | TGATCA | 1 cut(s) | 234 |
| BcoDI | GTCTC | 2 cut(s) | 413, 1149 |
| BfaI | CTAG | 1 cut(s) | 729 |
| BfmI | CTRYAG | 1 cut(s) | 6 |
| BfoI | RGCGCY | 1 cut(s) | 729 |
| BfuI | GTATCC | 1 cut(s) | 1206 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 883 |
| BglII | AGATCT | 1 cut(s) | 999 |
| Bme1390I | CCNGG | 2 cut(s) | 1021, 1081 |
| Bme18I | GGWCC | 2 cut(s) | 360, 1176 |
| BmgT120I | GGNCC | 6 cut(s) | 360, 761, 866, 884, 920, 1176 |
| BmiI | GGNNCC | 6 cut(s) | 222, 361, 762, 885, 951, 987 |
| BmrFI | CCNGG | 2 cut(s) | 1021, 1081 |
| BmrI | ACTGGG | 1 cut(s) | 1093 |
| BmsI | GCATC | 2 cut(s) | 805, 1103 |
| BmuI | ACTGGG | 1 cut(s) | 1093 |
| BpmI | CTGGAG | 3 cut(s) | 408, 918, 954 |
| Bpu10I | CCTNAGC | 3 cut(s) | 249, 510, 1172 |
| BpuEI | CTTGAG | 1 cut(s) | 900 |
| Bsa29I | ATCGAT | 1 cut(s) | 147 |
| BsaAI | YACGTR | 1 cut(s) | 863 |
| BsaBI | GATNNNNATC | 1 cut(s) | 233 |
| BsaJI | CCNNGG | 3 cut(s) | 355, 363, 1019 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1075, 1105 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 513, 830, 848 |
| Bse118I | RCCGGY | 2 cut(s) | 553, 640 |
| Bse1I | ACTGG | 6 cut(s) | 214, 249, 391, 835, 1012, 1099 |
| Bse21I | CCTNAGG | 1 cut(s) | 879 |
| Bse8I | GATNNNNATC | 1 cut(s) | 233 |
| BseBI | CCWGG | 2 cut(s) | 1021, 1081 |
| BseCI | ATCGAT | 1 cut(s) | 147 |
| BseDI | CCNNGG | 3 cut(s) | 355, 363, 1019 |
| BseGI | GGATG | 2 cut(s) | 676, 1094 |
| BseJI | GATNNNNATC | 1 cut(s) | 233 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 513, 830, 848 |
| BseMII | CTCAG | 4 cut(s) | 501, 893, 1152, 1186 |
| BseNI | ACTGG | 6 cut(s) | 214, 249, 391, 835, 1012, 1099 |
| BseXI | GCAGC | 6 cut(s) | 98, 631, 805, 1093, 1169, 1249 |
| Bsh1236I | CGCG | 1 cut(s) | 491 |
| BshFI | GGCC | 7 cut(s) | 277, 763, 776, 868, 886, 921, 1070 |
| BshVI | ATCGAT | 1 cut(s) | 147 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1173 |
| BsiSI | CCGG | 7 cut(s) | 224, 554, 564, 641, 947, 953, 1220 |
| BslFI | GGGAC | 1 cut(s) | 77 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 513, 830, 848 |
| BsmAI | GTCTC | 2 cut(s) | 413, 1149 |
| BsmBI | CGTCTC | 2 cut(s) | 413, 1149 |
| BsmFI | GGGAC | 1 cut(s) | 77 |
| BsnI | GGCC | 7 cut(s) | 277, 763, 776, 868, 886, 921, 1070 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1173 |
| Bsp143I | GATC | 3 cut(s) | 234, 833, 999 |
| BspANI | GGCC | 7 cut(s) | 277, 763, 776, 868, 886, 921, 1070 |
| BspCNI | CTCAG | 4 cut(s) | 502, 892, 1153, 1185 |
| BspDI | ATCGAT | 1 cut(s) | 147 |
| BspFNI | CGCG | 1 cut(s) | 491 |
| BspLI | GGNNCC | 6 cut(s) | 222, 361, 762, 885, 951, 987 |
| BspPI | GGATC | 1 cut(s) | 841 |
| BsrFI | RCCGGY | 2 cut(s) | 553, 640 |
| BsrI | ACTGG | 6 cut(s) | 214, 249, 391, 835, 1012, 1099 |
| BssAI | RCCGGY | 2 cut(s) | 553, 640 |
| BssECI | CCNNGG | 3 cut(s) | 355, 363, 1019 |
| BssMI | GATC | 3 cut(s) | 234, 833, 999 |
| BssT1I | CCWWGG | 1 cut(s) | 355 |
| Bst2UI | CCWGG | 2 cut(s) | 1021, 1081 |
| Bst4CI | ACNGT | 5 cut(s) | 104, 205, 424, 689, 1091 |
| BstBAI | YACGTR | 1 cut(s) | 863 |
| BstC8I | GCNNGC | 1 cut(s) | 642 |
| BstDEI | CTNAG | 6 cut(s) | 249, 510, 744, 879, 1161, 1172 |
| BstF5I | GGATG | 2 cut(s) | 676, 1094 |
| BstFNI | CGCG | 1 cut(s) | 491 |
| BstH2I | RGCGCY | 1 cut(s) | 729 |
| BstHHI | GCGC | 2 cut(s) | 491, 728 |
| BstKTI | GATC | 3 cut(s) | 237, 836, 1002 |
| BstMAI | GTCTC | 2 cut(s) | 413, 1149 |
| BstMBI | GATC | 3 cut(s) | 234, 833, 999 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 378, 616, 723, 732, 874, 883, 1076 |
| BstNI | CCWGG | 2 cut(s) | 1021, 1081 |
| BstNSI | RCATGY | 2 cut(s) | 631, 901 |
| BstSCI | CCNGG | 2 cut(s) | 1019, 1079 |
| BstSFI | CTRYAG | 1 cut(s) | 6 |
| BstUI | CGCG | 1 cut(s) | 491 |
| BstV1I | GCAGC | 6 cut(s) | 98, 631, 805, 1093, 1169, 1249 |
| BstX2I | RGATCY | 1 cut(s) | 999 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 982 |
| BstYI | RGATCY | 1 cut(s) | 999 |
| Bsu15I | ATCGAT | 1 cut(s) | 147 |
| Bsu36I | CCTNAGG | 1 cut(s) | 879 |
| BsuI | GTATCC | 1 cut(s) | 1206 |
| BsuRI | GGCC | 7 cut(s) | 277, 763, 776, 868, 886, 921, 1070 |
| BsuTUI | ATCGAT | 1 cut(s) | 147 |
| BtsCI | GGATG | 2 cut(s) | 676, 1094 |
| BtsI | GCAGTG | 1 cut(s) | 742 |
| BtsIMutI | CAGTG | 4 cut(s) | 100, 210, 742, 828 |
| Cac8I | GCNNGC | 1 cut(s) | 642 |
| CaiI | CAGNNNCTG | 1 cut(s) | 209 |
| CfoI | GCGC | 2 cut(s) | 491, 728 |
| Cfr10I | RCCGGY | 2 cut(s) | 553, 640 |
| Cfr13I | GGNCC | 6 cut(s) | 360, 761, 866, 884, 920, 1176 |
| ClaI | ATCGAT | 1 cut(s) | 147 |
| CseI | GACGC | 1 cut(s) | 1131 |
| Csp6I | GTAC | 5 cut(s) | 551, 857, 912, 1009, 1015 |
| CviAII | CATG | 4 cut(s) | 628, 848, 898, 982 |
| CviQI | GTAC | 5 cut(s) | 551, 857, 912, 1009, 1015 |
| DdeI | CTNAG | 6 cut(s) | 249, 510, 744, 879, 1161, 1172 |
| DpnI | GATC | 3 cut(s) | 236, 835, 1001 |
| DpnII | GATC | 3 cut(s) | 234, 833, 999 |
| EciI | GGCGGA | 1 cut(s) | 396 |
| Ecl136II | GAGCTC | 1 cut(s) | 1171 |
| Eco130I | CCWWGG | 1 cut(s) | 355 |
| Eco24I | GRGCYC | 1 cut(s) | 1173 |
| Eco47I | GGWCC | 2 cut(s) | 360, 1176 |
| Eco53kI | GAGCTC | 1 cut(s) | 1171 |
| Eco57I | CTGAAG | 3 cut(s) | 33, 453, 942 |
| Eco72I | CACGTG | 1 cut(s) | 863 |
| Eco81I | CCTNAGG | 1 cut(s) | 879 |
| EcoICRI | GAGCTC | 1 cut(s) | 1171 |
| EcoO109I | RGGNCCY | 3 cut(s) | 884, 920, 1176 |
| EcoRII | CCWGG | 2 cut(s) | 1019, 1079 |
| EcoT14I | CCWWGG | 1 cut(s) | 355 |
| EcoT38I | GRGCYC | 1 cut(s) | 1173 |
| ErhI | CCWWGG | 1 cut(s) | 355 |
| Esp3I | CGTCTC | 2 cut(s) | 413, 1149 |
| FaeI | CATG | 4 cut(s) | 631, 851, 901, 985 |
| FaqI | GGGAC | 1 cut(s) | 77 |
| FatI | CATG | 4 cut(s) | 627, 847, 897, 981 |
| FauI | CCCGC | 2 cut(s) | 484, 1084 |
| FbaI | TGATCA | 1 cut(s) | 234 |
| FokI | GGATG | 2 cut(s) | 683, 1081 |
| FriOI | GRGCYC | 1 cut(s) | 1173 |
| FspBI | CTAG | 1 cut(s) | 729 |
| GlaI | GCGC | 2 cut(s) | 490, 727 |
| GsuI | CTGGAG | 3 cut(s) | 408, 918, 954 |
| HaeII | RGCGCY | 1 cut(s) | 729 |
| HaeIII | GGCC | 7 cut(s) | 277, 763, 776, 868, 886, 921, 1070 |
| HapII | CCGG | 7 cut(s) | 224, 554, 564, 641, 947, 953, 1220 |
| HgaI | GACGC | 1 cut(s) | 1131 |
| HhaI | GCGC | 2 cut(s) | 491, 728 |
| Hin1II | CATG | 4 cut(s) | 631, 851, 901, 985 |
| Hin6I | GCGC | 2 cut(s) | 489, 726 |
| HinP1I | GCGC | 2 cut(s) | 489, 726 |
| HinfI | GANTC | 4 cut(s) | 788, 1190, 1247, 1273 |
| HpaII | CCGG | 7 cut(s) | 224, 554, 564, 641, 947, 953, 1220 |
| HphI | GGTGA | 5 cut(s) | 601, 616, 661, 824, 828 |
| Hpy166II | GTNNAC | 3 cut(s) | 157, 551, 625 |
| Hpy188I | TCNGA | 8 cut(s) | 185, 285, 364, 634, 793, 1189, 1246, 1278 |
| Hpy188III | TCNNGA | 4 cut(s) | 136, 238, 449, 782 |
| Hpy8I | GTNNAC | 3 cut(s) | 157, 551, 625 |
| Hpy99I | CGWCG | 3 cut(s) | 1216, 1219, 1271 |
| HpyAV | CCTTC | 6 cut(s) | 101, 280, 586, 751, 766, 1261 |
| HpyCH4III | ACNGT | 5 cut(s) | 104, 205, 424, 689, 1091 |
| HpyCH4IV | ACGT | 2 cut(s) | 216, 862 |
| HpyCH4V | TGCA | 4 cut(s) | 114, 266, 1094, 1287 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 378, 616, 723, 732, 874, 883, 1076 |
| HpyF3I | CTNAG | 6 cut(s) | 249, 510, 744, 879, 1161, 1172 |
| HpySE526I | ACGT | 2 cut(s) | 216, 862 |
| Hsp92II | CATG | 4 cut(s) | 631, 851, 901, 985 |
| HspAI | GCGC | 2 cut(s) | 489, 726 |
| KroI | GCCGGC | 1 cut(s) | 640 |
| KroNI | GCCGGC | 1 cut(s) | 642 |
| Ksp22I | TGATCA | 1 cut(s) | 234 |
| Kzo9I | GATC | 3 cut(s) | 234, 833, 999 |
| LmnI | GCTCC | 8 cut(s) | 220, 826, 937, 949, 955, 973, 991, 1083 |
| Lsp1109I | GCAGC | 6 cut(s) | 98, 631, 805, 1093, 1169, 1249 |
| LweI | GCATC | 2 cut(s) | 805, 1103 |
| MaeI | CTAG | 1 cut(s) | 729 |
| MaeII | ACGT | 2 cut(s) | 216, 862 |
| MaeIII | GTNAC | 2 cut(s) | 199, 205 |
| MalI | GATC | 3 cut(s) | 236, 835, 1001 |
| MboI | GATC | 3 cut(s) | 234, 833, 999 |
| MboII | GAAGA | 7 cut(s) | 56, 331, 359, 478, 664, 692, 760 |
| MflI | RGATCY | 1 cut(s) | 999 |
| MhlI | GDGCHC | 1 cut(s) | 1173 |
| MluCI | AATT | 5 cut(s) | 304, 400, 691, 925, 1228 |
| MlyI | GAGTC | 1 cut(s) | 1184 |
| MroNI | GCCGGC | 1 cut(s) | 640 |
| MroXI | GAANNNNTTC | 1 cut(s) | 438 |
| MseI | TTAA | 1 cut(s) | 519 |
| MslI | CAYNNNNRTG | 1 cut(s) | 852 |
| MspA1I | CMGCKG | 3 cut(s) | 11, 509, 1160 |
| MspI | CCGG | 7 cut(s) | 224, 554, 564, 641, 947, 953, 1220 |
| MspR9I | CCNGG | 2 cut(s) | 1021, 1081 |
| MvaI | CCWGG | 2 cut(s) | 1021, 1081 |
| MvnI | CGCG | 1 cut(s) | 491 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 378, 616, 723, 732, 874, 883, 1076 |
| NaeI | GCCGGC | 1 cut(s) | 642 |
| NdeII | GATC | 3 cut(s) | 234, 833, 999 |
| NgoMIV | GCCGGC | 1 cut(s) | 640 |
| NlaIII | CATG | 4 cut(s) | 631, 851, 901, 985 |
| NlaIV | GGNNCC | 6 cut(s) | 222, 361, 762, 885, 951, 987 |
| NmuCI | GTSAC | 1 cut(s) | 205 |
| NspI | RCATGY | 2 cut(s) | 631, 901 |
| PciI | ACATGT | 1 cut(s) | 627 |
| PdiI | GCCGGC | 1 cut(s) | 642 |
| PdmI | GAANNNNTTC | 1 cut(s) | 438 |
| PfeI | GAWTC | 3 cut(s) | 788, 1247, 1273 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 830, 848 |
| PleI | GAGTC | 1 cut(s) | 1184 |
| PmaCI | CACGTG | 1 cut(s) | 863 |
| PmlI | CACGTG | 1 cut(s) | 863 |
| PpsI | GAGTC | 1 cut(s) | 1184 |
| Ppu21I | YACGTR | 1 cut(s) | 863 |
| PpuMI | RGGWCCY | 1 cut(s) | 1176 |
| PscI | ACATGT | 1 cut(s) | 627 |
| Psp124BI | GAGCTC | 1 cut(s) | 1173 |
| Psp5II | RGGWCCY | 1 cut(s) | 1176 |
| Psp6I | CCWGG | 2 cut(s) | 1019, 1079 |
| PspCI | CACGTG | 1 cut(s) | 863 |
| PspGI | CCWGG | 2 cut(s) | 1019, 1079 |
| PspN4I | GGNNCC | 6 cut(s) | 222, 361, 762, 885, 951, 987 |
| PspPI | GGNCC | 6 cut(s) | 360, 761, 866, 884, 920, 1176 |
| PspPPI | RGGWCCY | 1 cut(s) | 1176 |
| PstNI | CAGNNNCTG | 1 cut(s) | 209 |
| PsuI | RGATCY | 1 cut(s) | 999 |
| PvuII | CAGCTG | 2 cut(s) | 11, 1160 |
| RsaI | GTAC | 5 cut(s) | 552, 858, 913, 1010, 1016 |
| RsaNI | GTAC | 5 cut(s) | 551, 857, 912, 1009, 1015 |
| RseI | CAYNNNNRTG | 1 cut(s) | 852 |
| SacI | GAGCTC | 1 cut(s) | 1173 |
| SaqAI | TTAA | 1 cut(s) | 519 |
| Sau3AI | GATC | 3 cut(s) | 234, 833, 999 |
| Sau96I | GGNCC | 6 cut(s) | 360, 761, 866, 884, 920, 1176 |
| SchI | GAGTC | 1 cut(s) | 1184 |
| ScrFI | CCNGG | 2 cut(s) | 1021, 1081 |
| SduI | GDGCHC | 1 cut(s) | 1173 |
| SfaNI | GCATC | 2 cut(s) | 805, 1103 |
| SfcI | CTRYAG | 1 cut(s) | 6 |
| SinI | GGWCC | 2 cut(s) | 360, 1176 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 852 |
| SmlI | CTYRAG | 1 cut(s) | 915 |
| SmoI | CTYRAG | 1 cut(s) | 915 |
| Sse9I | AATT | 5 cut(s) | 304, 400, 691, 925, 1228 |
| SspMI | CTAG | 1 cut(s) | 729 |
| SstI | GAGCTC | 1 cut(s) | 1173 |
| StyD4I | CCNGG | 2 cut(s) | 1019, 1079 |
| StyI | CCWWGG | 1 cut(s) | 355 |
| TaaI | ACNGT | 5 cut(s) | 104, 205, 424, 689, 1091 |
| TaiI | ACGT | 2 cut(s) | 219, 865 |
| TaqI | TCGA | 1 cut(s) | 147 |
| TasI | AATT | 5 cut(s) | 304, 400, 691, 925, 1228 |
| TauI | GCSGC | 7 cut(s) | 396, 489, 570, 720, 723, 726, 1237 |
| TfiI | GAWTC | 3 cut(s) | 788, 1247, 1273 |
| Tru1I | TTAA | 1 cut(s) | 519 |
| Tru9I | TTAA | 1 cut(s) | 519 |
| TscAI | CASTG | 4 cut(s) | 107, 210, 742, 835 |
| TseFI | GTSAC | 1 cut(s) | 205 |
| TseI | GCWGC | 7 cut(s) | 111, 644, 818, 1106, 1157, 1237, 1287 |
| Tsp45I | GTSAC | 1 cut(s) | 205 |
| TspDTI | ATGAA | 3 cut(s) | 426, 693, 1070 |
| TspRI | CASTG | 4 cut(s) | 107, 210, 742, 835 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 830, 848 |
| VpaK11BI | GGWCC | 2 cut(s) | 360, 1176 |
| XceI | RCATGY | 2 cut(s) | 631, 901 |
| XmnI | GAANNNNTTC | 1 cut(s) | 438 |
| XspI | CTAG | 1 cut(s) | 729 |