pycom12g19960

Heavy-metal-associated domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
21638699 .. 21640334
1636 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g19960.3

Sequence Viewer

Length: 1299 bp
ATGCCTACAGCTGAAGCTAAACCAGAACAACCGAAAGGAAGTGAAGAAGTTTCCCAACGCCCTCTCAACTACAAGATTTGGGTTTTGAAAGTCCCTATCCACTGTGAAGGCTGCAAGAAAAAGGTCGCAAAAATCTTGAAAAAAATCGATGGGGTTTACAAAACAGAGTTTGACGGGAACATCGGAAAGGAAAACAAAGTTACAGTGACTGGAAACGTGGAGCCGGAGATTTTGATCAGGAAACTGGCTAAGGGAGGGAAATATGCAGAGATGTGGCCTTGTCAGAAGGCTAACAACAGCAATAATTCAAATGACAAGAAGAAAAATAAGGAGAAACAGCAAGGCGAAGATACCCAAGGGTCCGAGGACGGCAACTATGGCGGAACTGGAGGCGGCGGTAATTGTGATGATGAAAGGGAGACGGTTGAGGCTGAAGTTGTTCAAGTTCAGGATAATAGTGGTAAGAAGAAAAATAAAGGTGGTAGCGGCGCGGGTGGGAGTAAGACCGCTGAGGGGGTTAATGCTGTGAAAGTGAATGAGGGGGGTGGTGTACCGGCGAAATCCGGCGGCGGTGGAAAGGGTAAAGAGGTGAAGGTTGAGGTGGTGAAGCAGGGGAAGCCTGTGAACATGTCTGAACAGCCGGCTGCGGTGAAGAAGTGTTTTGGTGGGGATGACGATGAAGATGACAGTAATTGTGAGGTTGATAAAAGTGGAGGCGGCGGCGGCGCTAGTAGCAGTGGAACTAAGAAGAACAAGAAGGGGCCAAGTGGGAAGGCCAATCCTGATGATTCAGATGAGGTTGAACAATGTGGTGATGCTGCTCCACGCACTGGATCACCACCAAATCATGGTAATGTACCACGTGGGCCTCCTATGCCTCAGGGGCCTTACCCTTACATGCTTCCATCTGGTACTCAAGGCCCTAATTTTGCTCCAGCTCTTGCTCCGGCTCCGGCTTCAGCACCAGCTCCAGCCAATCACATGGCTCCACATCAGCAGATCTATGAGTACCAGTACCCCAGGCAGAACTACAACGGGCTTCCCCTCCAAGCTATGAACTTCAATACGGCCTACCCCGCCAGGAGCTACGGTGCATCCCAGTATGCTGCCCCACTACCTCACGCACACTCTTACACTTATGCGTCTCAAAGTGTGGCAGCTGAGAGTGAGCTCAGGTCCTATCATTCGGACTCGTATCCGCAGTATTACCCGTCGTCGCCGGAGTATAATTCGCCGCAGCAATCCGATTCCTTCGTGCTGTTCAGCGACGAGAATCCGAACGGGTGCAGCATTATGTGA

Protein Analysis

433

Amino Acids

45.78

Weight (kDa)

6.43

Isoelectric Point (pI)

51.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 830, 848
AccII CGCG 1 cut(s) 491
AclWI GGATC 1 cut(s) 841
AcuI CTGAAG 3 cut(s) 33, 453, 942
AcvI CACGTG 1 cut(s) 863
AfaI GTAC 5 cut(s) 552, 858, 913, 1010, 1016
AfiI CCNNNNNNNGG 3 cut(s) 513, 830, 848
AflIII ACRYGT 1 cut(s) 627
AgsI TTSAA 6 cut(s) 88, 139, 309, 443, 803, 1063
AjnI CCWGG 2 cut(s) 1019, 1079
AluBI AGCT 8 cut(s) 11, 17, 938, 968, 1052, 1086, 1160, 1171
AluI AGCT 8 cut(s) 11, 17, 938, 968, 1052, 1086, 1160, 1171
Alw21I GWGCWC 1 cut(s) 1173
Alw26I GTCTC 2 cut(s) 413, 1149
AlwI GGATC 1 cut(s) 841
AlwNI CAGNNNCTG 1 cut(s) 209
AoxI GGCC 7 cut(s) 275, 761, 774, 866, 884, 919, 1068
ApeKI GCWGC 7 cut(s) 111, 644, 818, 1106, 1157, 1237, 1287
Asp700I GAANNNNTTC 1 cut(s) 438
AspLEI GCGC 2 cut(s) 491, 728
AspS9I GGNCC 6 cut(s) 360, 761, 866, 884, 920, 1176
AsuHPI GGTGA 5 cut(s) 601, 616, 661, 824, 828
AvaII GGWCC 2 cut(s) 360, 1176
AxyI CCTNAGG 1 cut(s) 879
BanII GRGCYC 1 cut(s) 1173
BbrPI CACGTG 1 cut(s) 863
Bbv12I GWGCWC 1 cut(s) 1173
BbvCI CCTCAGC 1 cut(s) 510
BbvI GCAGC 6 cut(s) 98, 631, 805, 1093, 1169, 1249
BccI CCATC 2 cut(s) 143, 913
BceAI ACGGC 2 cut(s) 385, 1083
BciT130I CCWGG 2 cut(s) 1021, 1081
BciVI GTATCC 1 cut(s) 1206
BclI TGATCA 1 cut(s) 234
BcoDI GTCTC 2 cut(s) 413, 1149
BfaI CTAG 1 cut(s) 729
BfmI CTRYAG 1 cut(s) 6
BfoI RGCGCY 1 cut(s) 729
BfuI GTATCC 1 cut(s) 1206
BglI GCCNNNNNGGC 1 cut(s) 883
BglII AGATCT 1 cut(s) 999
Bme1390I CCNGG 2 cut(s) 1021, 1081
Bme18I GGWCC 2 cut(s) 360, 1176
BmgT120I GGNCC 6 cut(s) 360, 761, 866, 884, 920, 1176
BmiI GGNNCC 6 cut(s) 222, 361, 762, 885, 951, 987
BmrFI CCNGG 2 cut(s) 1021, 1081
BmrI ACTGGG 1 cut(s) 1093
BmsI GCATC 2 cut(s) 805, 1103
BmuI ACTGGG 1 cut(s) 1093
BpmI CTGGAG 3 cut(s) 408, 918, 954
Bpu10I CCTNAGC 3 cut(s) 249, 510, 1172
BpuEI CTTGAG 1 cut(s) 900
Bsa29I ATCGAT 1 cut(s) 147
BsaAI YACGTR 1 cut(s) 863
BsaBI GATNNNNATC 1 cut(s) 233
BsaJI CCNNGG 3 cut(s) 355, 363, 1019
BsaXI ACNNNNNCTCC 2 cut(s) 1075, 1105
Bsc4I CCNNNNNNNGG 3 cut(s) 513, 830, 848
Bse118I RCCGGY 2 cut(s) 553, 640
Bse1I ACTGG 6 cut(s) 214, 249, 391, 835, 1012, 1099
Bse21I CCTNAGG 1 cut(s) 879
Bse8I GATNNNNATC 1 cut(s) 233
BseBI CCWGG 2 cut(s) 1021, 1081
BseCI ATCGAT 1 cut(s) 147
BseDI CCNNGG 3 cut(s) 355, 363, 1019
BseGI GGATG 2 cut(s) 676, 1094
BseJI GATNNNNATC 1 cut(s) 233
BseLI CCNNNNNNNGG 3 cut(s) 513, 830, 848
BseMII CTCAG 4 cut(s) 501, 893, 1152, 1186
BseNI ACTGG 6 cut(s) 214, 249, 391, 835, 1012, 1099
BseXI GCAGC 6 cut(s) 98, 631, 805, 1093, 1169, 1249
Bsh1236I CGCG 1 cut(s) 491
BshFI GGCC 7 cut(s) 277, 763, 776, 868, 886, 921, 1070
BshVI ATCGAT 1 cut(s) 147
BsiHKAI GWGCWC 1 cut(s) 1173
BsiSI CCGG 7 cut(s) 224, 554, 564, 641, 947, 953, 1220
BslFI GGGAC 1 cut(s) 77
BslI CCNNNNNNNGG 3 cut(s) 513, 830, 848
BsmAI GTCTC 2 cut(s) 413, 1149
BsmBI CGTCTC 2 cut(s) 413, 1149
BsmFI GGGAC 1 cut(s) 77
BsnI GGCC 7 cut(s) 277, 763, 776, 868, 886, 921, 1070
Bsp1286I GDGCHC 1 cut(s) 1173
Bsp143I GATC 3 cut(s) 234, 833, 999
BspANI GGCC 7 cut(s) 277, 763, 776, 868, 886, 921, 1070
BspCNI CTCAG 4 cut(s) 502, 892, 1153, 1185
BspDI ATCGAT 1 cut(s) 147
BspFNI CGCG 1 cut(s) 491
BspLI GGNNCC 6 cut(s) 222, 361, 762, 885, 951, 987
BspPI GGATC 1 cut(s) 841
BsrFI RCCGGY 2 cut(s) 553, 640
BsrI ACTGG 6 cut(s) 214, 249, 391, 835, 1012, 1099
BssAI RCCGGY 2 cut(s) 553, 640
BssECI CCNNGG 3 cut(s) 355, 363, 1019
BssMI GATC 3 cut(s) 234, 833, 999
BssT1I CCWWGG 1 cut(s) 355
Bst2UI CCWGG 2 cut(s) 1021, 1081
Bst4CI ACNGT 5 cut(s) 104, 205, 424, 689, 1091
BstBAI YACGTR 1 cut(s) 863
BstC8I GCNNGC 1 cut(s) 642
BstDEI CTNAG 6 cut(s) 249, 510, 744, 879, 1161, 1172
BstF5I GGATG 2 cut(s) 676, 1094
BstFNI CGCG 1 cut(s) 491
BstH2I RGCGCY 1 cut(s) 729
BstHHI GCGC 2 cut(s) 491, 728
BstKTI GATC 3 cut(s) 237, 836, 1002
BstMAI GTCTC 2 cut(s) 413, 1149
BstMBI GATC 3 cut(s) 234, 833, 999
BstMWI GCNNNNNNNGC 7 cut(s) 378, 616, 723, 732, 874, 883, 1076
BstNI CCWGG 2 cut(s) 1021, 1081
BstNSI RCATGY 2 cut(s) 631, 901
BstSCI CCNGG 2 cut(s) 1019, 1079
BstSFI CTRYAG 1 cut(s) 6
BstUI CGCG 1 cut(s) 491
BstV1I GCAGC 6 cut(s) 98, 631, 805, 1093, 1169, 1249
BstX2I RGATCY 1 cut(s) 999
BstXI CCANNNNNNTGG 1 cut(s) 982
BstYI RGATCY 1 cut(s) 999
Bsu15I ATCGAT 1 cut(s) 147
Bsu36I CCTNAGG 1 cut(s) 879
BsuI GTATCC 1 cut(s) 1206
BsuRI GGCC 7 cut(s) 277, 763, 776, 868, 886, 921, 1070
BsuTUI ATCGAT 1 cut(s) 147
BtsCI GGATG 2 cut(s) 676, 1094
BtsI GCAGTG 1 cut(s) 742
BtsIMutI CAGTG 4 cut(s) 100, 210, 742, 828
Cac8I GCNNGC 1 cut(s) 642
CaiI CAGNNNCTG 1 cut(s) 209
CfoI GCGC 2 cut(s) 491, 728
Cfr10I RCCGGY 2 cut(s) 553, 640
Cfr13I GGNCC 6 cut(s) 360, 761, 866, 884, 920, 1176
ClaI ATCGAT 1 cut(s) 147
CseI GACGC 1 cut(s) 1131
Csp6I GTAC 5 cut(s) 551, 857, 912, 1009, 1015
CviAII CATG 4 cut(s) 628, 848, 898, 982
CviQI GTAC 5 cut(s) 551, 857, 912, 1009, 1015
DdeI CTNAG 6 cut(s) 249, 510, 744, 879, 1161, 1172
DpnI GATC 3 cut(s) 236, 835, 1001
DpnII GATC 3 cut(s) 234, 833, 999
EciI GGCGGA 1 cut(s) 396
Ecl136II GAGCTC 1 cut(s) 1171
Eco130I CCWWGG 1 cut(s) 355
Eco24I GRGCYC 1 cut(s) 1173
Eco47I GGWCC 2 cut(s) 360, 1176
Eco53kI GAGCTC 1 cut(s) 1171
Eco57I CTGAAG 3 cut(s) 33, 453, 942
Eco72I CACGTG 1 cut(s) 863
Eco81I CCTNAGG 1 cut(s) 879
EcoICRI GAGCTC 1 cut(s) 1171
EcoO109I RGGNCCY 3 cut(s) 884, 920, 1176
EcoRII CCWGG 2 cut(s) 1019, 1079
EcoT14I CCWWGG 1 cut(s) 355
EcoT38I GRGCYC 1 cut(s) 1173
ErhI CCWWGG 1 cut(s) 355
Esp3I CGTCTC 2 cut(s) 413, 1149
FaeI CATG 4 cut(s) 631, 851, 901, 985
FaqI GGGAC 1 cut(s) 77
FatI CATG 4 cut(s) 627, 847, 897, 981
FauI CCCGC 2 cut(s) 484, 1084
FbaI TGATCA 1 cut(s) 234
FokI GGATG 2 cut(s) 683, 1081
FriOI GRGCYC 1 cut(s) 1173
FspBI CTAG 1 cut(s) 729
GlaI GCGC 2 cut(s) 490, 727
GsuI CTGGAG 3 cut(s) 408, 918, 954
HaeII RGCGCY 1 cut(s) 729
HaeIII GGCC 7 cut(s) 277, 763, 776, 868, 886, 921, 1070
HapII CCGG 7 cut(s) 224, 554, 564, 641, 947, 953, 1220
HgaI GACGC 1 cut(s) 1131
HhaI GCGC 2 cut(s) 491, 728
Hin1II CATG 4 cut(s) 631, 851, 901, 985
Hin6I GCGC 2 cut(s) 489, 726
HinP1I GCGC 2 cut(s) 489, 726
HinfI GANTC 4 cut(s) 788, 1190, 1247, 1273
HpaII CCGG 7 cut(s) 224, 554, 564, 641, 947, 953, 1220
HphI GGTGA 5 cut(s) 601, 616, 661, 824, 828
Hpy166II GTNNAC 3 cut(s) 157, 551, 625
Hpy188I TCNGA 8 cut(s) 185, 285, 364, 634, 793, 1189, 1246, 1278
Hpy188III TCNNGA 4 cut(s) 136, 238, 449, 782
Hpy8I GTNNAC 3 cut(s) 157, 551, 625
Hpy99I CGWCG 3 cut(s) 1216, 1219, 1271
HpyAV CCTTC 6 cut(s) 101, 280, 586, 751, 766, 1261
HpyCH4III ACNGT 5 cut(s) 104, 205, 424, 689, 1091
HpyCH4IV ACGT 2 cut(s) 216, 862
HpyCH4V TGCA 4 cut(s) 114, 266, 1094, 1287
HpyF10VI GCNNNNNNNGC 7 cut(s) 378, 616, 723, 732, 874, 883, 1076
HpyF3I CTNAG 6 cut(s) 249, 510, 744, 879, 1161, 1172
HpySE526I ACGT 2 cut(s) 216, 862
Hsp92II CATG 4 cut(s) 631, 851, 901, 985
HspAI GCGC 2 cut(s) 489, 726
KroI GCCGGC 1 cut(s) 640
KroNI GCCGGC 1 cut(s) 642
Ksp22I TGATCA 1 cut(s) 234
Kzo9I GATC 3 cut(s) 234, 833, 999
LmnI GCTCC 8 cut(s) 220, 826, 937, 949, 955, 973, 991, 1083
Lsp1109I GCAGC 6 cut(s) 98, 631, 805, 1093, 1169, 1249
LweI GCATC 2 cut(s) 805, 1103
MaeI CTAG 1 cut(s) 729
MaeII ACGT 2 cut(s) 216, 862
MaeIII GTNAC 2 cut(s) 199, 205
MalI GATC 3 cut(s) 236, 835, 1001
MboI GATC 3 cut(s) 234, 833, 999
MboII GAAGA 7 cut(s) 56, 331, 359, 478, 664, 692, 760
MflI RGATCY 1 cut(s) 999
MhlI GDGCHC 1 cut(s) 1173
MluCI AATT 5 cut(s) 304, 400, 691, 925, 1228
MlyI GAGTC 1 cut(s) 1184
MroNI GCCGGC 1 cut(s) 640
MroXI GAANNNNTTC 1 cut(s) 438
MseI TTAA 1 cut(s) 519
MslI CAYNNNNRTG 1 cut(s) 852
MspA1I CMGCKG 3 cut(s) 11, 509, 1160
MspI CCGG 7 cut(s) 224, 554, 564, 641, 947, 953, 1220
MspR9I CCNGG 2 cut(s) 1021, 1081
MvaI CCWGG 2 cut(s) 1021, 1081
MvnI CGCG 1 cut(s) 491
MwoI GCNNNNNNNGC 7 cut(s) 378, 616, 723, 732, 874, 883, 1076
NaeI GCCGGC 1 cut(s) 642
NdeII GATC 3 cut(s) 234, 833, 999
NgoMIV GCCGGC 1 cut(s) 640
NlaIII CATG 4 cut(s) 631, 851, 901, 985
NlaIV GGNNCC 6 cut(s) 222, 361, 762, 885, 951, 987
NmuCI GTSAC 1 cut(s) 205
NspI RCATGY 2 cut(s) 631, 901
PciI ACATGT 1 cut(s) 627
PdiI GCCGGC 1 cut(s) 642
PdmI GAANNNNTTC 1 cut(s) 438
PfeI GAWTC 3 cut(s) 788, 1247, 1273
PflMI CCANNNNNTGG 2 cut(s) 830, 848
PleI GAGTC 1 cut(s) 1184
PmaCI CACGTG 1 cut(s) 863
PmlI CACGTG 1 cut(s) 863
PpsI GAGTC 1 cut(s) 1184
Ppu21I YACGTR 1 cut(s) 863
PpuMI RGGWCCY 1 cut(s) 1176
PscI ACATGT 1 cut(s) 627
Psp124BI GAGCTC 1 cut(s) 1173
Psp5II RGGWCCY 1 cut(s) 1176
Psp6I CCWGG 2 cut(s) 1019, 1079
PspCI CACGTG 1 cut(s) 863
PspGI CCWGG 2 cut(s) 1019, 1079
PspN4I GGNNCC 6 cut(s) 222, 361, 762, 885, 951, 987
PspPI GGNCC 6 cut(s) 360, 761, 866, 884, 920, 1176
PspPPI RGGWCCY 1 cut(s) 1176
PstNI CAGNNNCTG 1 cut(s) 209
PsuI RGATCY 1 cut(s) 999
PvuII CAGCTG 2 cut(s) 11, 1160
RsaI GTAC 5 cut(s) 552, 858, 913, 1010, 1016
RsaNI GTAC 5 cut(s) 551, 857, 912, 1009, 1015
RseI CAYNNNNRTG 1 cut(s) 852
SacI GAGCTC 1 cut(s) 1173
SaqAI TTAA 1 cut(s) 519
Sau3AI GATC 3 cut(s) 234, 833, 999
Sau96I GGNCC 6 cut(s) 360, 761, 866, 884, 920, 1176
SchI GAGTC 1 cut(s) 1184
ScrFI CCNGG 2 cut(s) 1021, 1081
SduI GDGCHC 1 cut(s) 1173
SfaNI GCATC 2 cut(s) 805, 1103
SfcI CTRYAG 1 cut(s) 6
SinI GGWCC 2 cut(s) 360, 1176
SmiMI CAYNNNNRTG 1 cut(s) 852
SmlI CTYRAG 1 cut(s) 915
SmoI CTYRAG 1 cut(s) 915
Sse9I AATT 5 cut(s) 304, 400, 691, 925, 1228
SspMI CTAG 1 cut(s) 729
SstI GAGCTC 1 cut(s) 1173
StyD4I CCNGG 2 cut(s) 1019, 1079
StyI CCWWGG 1 cut(s) 355
TaaI ACNGT 5 cut(s) 104, 205, 424, 689, 1091
TaiI ACGT 2 cut(s) 219, 865
TaqI TCGA 1 cut(s) 147
TasI AATT 5 cut(s) 304, 400, 691, 925, 1228
TauI GCSGC 7 cut(s) 396, 489, 570, 720, 723, 726, 1237
TfiI GAWTC 3 cut(s) 788, 1247, 1273
Tru1I TTAA 1 cut(s) 519
Tru9I TTAA 1 cut(s) 519
TscAI CASTG 4 cut(s) 107, 210, 742, 835
TseFI GTSAC 1 cut(s) 205
TseI GCWGC 7 cut(s) 111, 644, 818, 1106, 1157, 1237, 1287
Tsp45I GTSAC 1 cut(s) 205
TspDTI ATGAA 3 cut(s) 426, 693, 1070
TspRI CASTG 4 cut(s) 107, 210, 742, 835
Van91I CCANNNNNTGG 2 cut(s) 830, 848
VpaK11BI GGWCC 2 cut(s) 360, 1176
XceI RCATGY 2 cut(s) 631, 901
XmnI GAANNNNTTC 1 cut(s) 438
XspI CTAG 1 cut(s) 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.