pycom14g16350

Converts alpha-aldose to the beta-anomer

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0004802
Physical Location & Seq
Forward (+)
18640997 .. 18643053
2057 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1185 bp
ATGCTTATAGGCAAGAGAGTCACCGGTTTATATCAATGGCACATGCCAAATTCAACCCCTTTCTTGGTGGAAATTTGTTTTTTTCCTTATTCGGTTTTGTATGGTGTTTATTTTTCATCCACAATGCCTAAGATATATTTGTTTTTGTGTTTTCTCTTGCTTCCGTTGGCTTTCGATCGCTCTGAGGCAAATGAAAAGGTTGGAGTTTATGAACTGAAGAAGGGAGATTTCTCTGCGAAGCTCACCAACTATGGTGCCACTGTGCTCTCCGTTATTCTCCCCGACAAGAACGGAAAATTAGACGACATTGTTCTTGGATTCGAATCGCTTAACGAGTACACGAATGATTCAGTCTACTTTGGAGCCATTGTTGGACGTGTTGCAAACAGAATTGGAGGAGCTCAATTTGAATTAAATGGCGTCCAATATAAGTTGGTTGCTAATGACGGGAATAACACTCTCCATGGTGGCCTTAAAGGGTTCAGTGATGTTGTGTGGACAGTAAAAAGTCACAAAGAAGATAGTCACATAACATTCACCTATGACAGCTTGGATGGTGAACAAGGATTTCCTGGTGATCTTTCTGTGTCGGTAACTTACATGATTATTGACACAAATAAACTAGCTATTAGAATGGAAGCCAAAGCTCATAACAAGGCCACTCCGGTGAACCTAGCACACCACACCTACTGGAATCTCCGCGGCCAAAACAGCGGTGACATCCTCTCGCACACGATCCAGCTCTTCGGGTCCAAGGTTACACCAGTTAATGACCAACTCATCCCCACTGGTGAAATTGTCCCTGTGAAAGGAACACCCTACGACTTCCTGGAGCCCCAAGAAATTGGTAGCAAGATCAATGGGCTGCCGGATGGATATGACATCAACTATGTGCTTGACCCTTCGAGTCCCAATCATTTGAGTAAGGCAGCAGTGTTGCATGACAGCGTGTCAGGGCGAAAATTGGAACTATGGACCAACAAGCCAGGGCTGCAGTTCTATACAACTAACATGTTGGACAATGTGCAGGGGAAAGGCGGGTTTGTGTACAGAAAGCACGCCGCAGTGTGCTTGGAGACGCAGGGTTTCCCGGATGCTGTGAATCACCCGAATTTCCCTTCGCAGATTGTGAAACCCGGAGAGGCCTACTTGCATGTGATGCTTTATAGATTTACAGCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko00052 ko01100 ko01110 ko01120 ko01130 map00010 map00052 map01100 map01110 map01120 map01130
Pfam Domains
Protein Families
Aldose_epim

Protein Analysis

395

Amino Acids

43.69

Weight (kDa)

6.22

Isoelectric Point (pI)

24.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldose_epim PF01263 69 - 390 4.8e-97 Aldose 1-epimerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 254
AccI GTMKAC 1 cut(s) 354
AccII CGCG 1 cut(s) 702
AciI CCGC 5 cut(s) 700, 702, 714, 1038, 1062
AclWI GGATC 1 cut(s) 730
AcoI YGGCCR 1 cut(s) 703
AcsI RAATTY 3 cut(s) 49, 72, 1111
AcuI CTGAAG 1 cut(s) 236
AcyI GRCGYC 1 cut(s) 420
AfaI GTAC 2 cut(s) 338, 1049
AfiI CCNNNNNNNGG 2 cut(s) 64, 809
AflIII ACRYGT 2 cut(s) 376, 1011
AgeI ACCGGT 1 cut(s) 23
AgsI TTSAA 2 cut(s) 54, 410
AhdI GACNNNNNGTC 1 cut(s) 949
AjiI CACGTC 1 cut(s) 377
AjnI CCWGG 3 cut(s) 571, 828, 985
AleI CACNNNNGTG 1 cut(s) 665
AluBI AGCT 7 cut(s) 241, 401, 549, 626, 647, 742, 1178
AluI AGCT 7 cut(s) 241, 401, 549, 626, 647, 742, 1178
Alw21I GWGCWC 2 cut(s) 267, 403
Alw26I GTCTC 1 cut(s) 1070
AlwI GGATC 1 cut(s) 730
AoxI GGCC 4 cut(s) 469, 657, 703, 1143
ApeKI GCWGC 4 cut(s) 865, 929, 991, 1178
ApoI RAATTY 3 cut(s) 49, 72, 1111
AsiGI ACCGGT 1 cut(s) 23
AspS9I GGNCC 2 cut(s) 750, 975
AsuC2I CCSGG 2 cut(s) 1091, 1137
AsuHPI GGTGA 9 cut(s) 13, 235, 529, 569, 587, 679, 728, 803, 1097
AsuII TTCGAA 1 cut(s) 321
AvaII GGWCC 2 cut(s) 750, 975
BanI GGYRCC 1 cut(s) 254
BanII GRGCYC 2 cut(s) 403, 837
Bbv12I GWGCWC 2 cut(s) 267, 403
BbvI GCAGC 4 cut(s) 852, 941, 978, 1165
BccI CCATC 2 cut(s) 548, 866
BciT130I CCWGG 3 cut(s) 573, 830, 987
BcnI CCSGG 2 cut(s) 1091, 1137
BcoDI GTCTC 1 cut(s) 1070
BfaI CTAG 2 cut(s) 623, 674
BfmI CTRYAG 1 cut(s) 992
BisI GCNGC 6 cut(s) 703, 866, 930, 992, 1062, 1179
BlsI GCNGC 6 cut(s) 704, 867, 931, 993, 1063, 1180
Bme1390I CCNGG 5 cut(s) 573, 830, 987, 1091, 1137
Bme18I GGWCC 2 cut(s) 750, 975
BmeRI GACNNNNNGTC 1 cut(s) 949
BmgBI CACGTC 1 cut(s) 377
BmgT120I GGNCC 2 cut(s) 750, 975
BmiI GGNNCC 4 cut(s) 256, 364, 751, 834
BmrFI CCNGG 5 cut(s) 573, 830, 987, 1091, 1137
BmsI GCATC 2 cut(s) 1084, 1149
BpmI CTGGAG 1 cut(s) 851
Bpu14I TTCGAA 1 cut(s) 321
BpuMI CCSGG 2 cut(s) 1091, 1137
BsaBI GATNNNNATC 1 cut(s) 322
BsaHI GRCGYC 1 cut(s) 420
BsaJI CCNNGG 4 cut(s) 463, 700, 753, 986
BsaWI WCCGGW 2 cut(s) 23, 664
BsaXI ACNNNNNCTCC 2 cut(s) 354, 384
Bsc4I CCNNNNNNNGG 2 cut(s) 64, 809
Bse118I RCCGGY 1 cut(s) 23
Bse1I ACTGG 3 cut(s) 695, 764, 793
Bse8I GATNNNNATC 1 cut(s) 322
BseBI CCWGG 3 cut(s) 573, 830, 987
BseDI CCNNGG 4 cut(s) 463, 700, 753, 986
BseGI GGATG 6 cut(s) 116, 559, 720, 780, 877, 1099
BseJI GATNNNNATC 1 cut(s) 322
BseLI CCNNNNNNNGG 2 cut(s) 64, 809
BseMII CTCAG 1 cut(s) 174
BseNI ACTGG 3 cut(s) 695, 764, 793
BseRI GAGGAG 1 cut(s) 411
BseXI GCAGC 4 cut(s) 852, 941, 978, 1165
BsgI GTGCAG 1 cut(s) 1046
Bsh1236I CGCG 1 cut(s) 702
Bsh1285I CGRYCG 1 cut(s) 178
BshFI GGCC 4 cut(s) 471, 659, 705, 1145
BshNI GGYRCC 1 cut(s) 254
BshTI ACCGGT 1 cut(s) 23
BsiEI CGRYCG 1 cut(s) 178
BsiHKAI GWGCWC 2 cut(s) 267, 403
BsiSI CCGG 5 cut(s) 24, 665, 869, 1091, 1137
BslFI GGGAC 2 cut(s) 785, 894
BslI CCNNNNNNNGG 2 cut(s) 64, 809
BsmAI GTCTC 1 cut(s) 1070
BsmBI CGTCTC 1 cut(s) 1070
BsmFI GGGAC 2 cut(s) 785, 894
BsnI GGCC 4 cut(s) 471, 659, 705, 1145
Bsp119I TTCGAA 1 cut(s) 321
Bsp1286I GDGCHC 3 cut(s) 267, 403, 837
Bsp1407I TGTACA 1 cut(s) 1047
Bsp143I GATC 4 cut(s) 175, 577, 735, 855
Bsp19I CCATGG 1 cut(s) 463
BspACI CCGC 5 cut(s) 700, 702, 714, 1038, 1062
BspANI GGCC 4 cut(s) 471, 659, 705, 1145
BspCNI CTCAG 1 cut(s) 175
BspFNI CGCG 1 cut(s) 702
BspLI GGNNCC 4 cut(s) 256, 364, 751, 834
BspMAI CTGCAG 1 cut(s) 996
BspPI GGATC 1 cut(s) 730
BspQI GCTCTTC 1 cut(s) 749
BspT104I TTCGAA 1 cut(s) 321
BspT107I GGYRCC 1 cut(s) 254
BsrFI RCCGGY 1 cut(s) 23
BsrGI TGTACA 1 cut(s) 1047
BsrI ACTGG 3 cut(s) 695, 764, 793
BssAI RCCGGY 1 cut(s) 23
BssECI CCNNGG 4 cut(s) 463, 700, 753, 986
BssMI GATC 4 cut(s) 175, 577, 735, 855
BssNI GRCGYC 1 cut(s) 420
BssT1I CCWWGG 2 cut(s) 463, 753
Bst2UI CCWGG 3 cut(s) 573, 830, 987
Bst4CI ACNGT 2 cut(s) 262, 502
Bst6I CTCTTC 1 cut(s) 749
BstACI GRCGYC 1 cut(s) 420
BstAPI GCANNNNNTGC 1 cut(s) 1159
BstAUI TGTACA 1 cut(s) 1047
BstBI TTCGAA 1 cut(s) 321
BstC8I GCNNGC 1 cut(s) 1059
BstDEI CTNAG 3 cut(s) 129, 183, 1182
BstDSI CCRYGG 2 cut(s) 463, 700
BstENI CCTNNNNNAGG 1 cut(s) 807
BstF5I GGATG 6 cut(s) 116, 559, 720, 780, 877, 1099
BstFNI CGCG 1 cut(s) 702
BstKTI GATC 4 cut(s) 178, 580, 738, 858
BstMAI GTCTC 1 cut(s) 1070
BstMBI GATC 4 cut(s) 175, 577, 735, 855
BstMCI CGRYCG 1 cut(s) 178
BstMWI GCNNNNNNNGC 3 cut(s) 711, 991, 1159
BstNI CCWGG 3 cut(s) 573, 830, 987
BstNSI RCATGY 3 cut(s) 46, 1015, 1157
BstSCI CCNGG 5 cut(s) 571, 828, 985, 1089, 1135
BstSFI CTRYAG 1 cut(s) 992
BstUI CGCG 1 cut(s) 702
BstV1I GCAGC 4 cut(s) 852, 941, 978, 1165
BstXI CCANNNNNNTGG 1 cut(s) 845
BsuRI GGCC 4 cut(s) 471, 659, 705, 1145
BtgI CCRYGG 2 cut(s) 463, 700
BtrI CACGTC 1 cut(s) 377
BtsCI GGATG 6 cut(s) 116, 559, 720, 780, 877, 1099
BtsI GCAGTG 2 cut(s) 939, 1071
BtsIMutI CAGTG 5 cut(s) 258, 490, 786, 939, 1071
Cac8I GCNNGC 1 cut(s) 1059
Cfr10I RCCGGY 1 cut(s) 23
Cfr13I GGNCC 2 cut(s) 750, 975
Cfr42I CCGCGG 1 cut(s) 703
CseI GACGC 2 cut(s) 409, 1087
Csp6I GTAC 2 cut(s) 337, 1048
CspAI ACCGGT 1 cut(s) 23
CviAII CATG 6 cut(s) 43, 464, 601, 941, 1012, 1154
CviQI GTAC 2 cut(s) 337, 1048
DdeI CTNAG 3 cut(s) 129, 183, 1182
DpnI GATC 4 cut(s) 177, 579, 737, 857
DpnII GATC 4 cut(s) 175, 577, 735, 855
DriI GACNNNNNGTC 1 cut(s) 949
EaeI YGGCCR 1 cut(s) 703
Eam1104I CTCTTC 1 cut(s) 749
Eam1105I GACNNNNNGTC 1 cut(s) 949
EarI CTCTTC 1 cut(s) 749
Ecl136II GAGCTC 1 cut(s) 401
Eco130I CCWWGG 2 cut(s) 463, 753
Eco147I AGGCCT 1 cut(s) 1145
Eco24I GRGCYC 2 cut(s) 403, 837
Eco47I GGWCC 2 cut(s) 750, 975
Eco53kI GAGCTC 1 cut(s) 401
Eco57I CTGAAG 1 cut(s) 236
EcoICRI GAGCTC 1 cut(s) 401
EcoNI CCTNNNNNAGG 1 cut(s) 807
EcoRII CCWGG 3 cut(s) 571, 828, 985
EcoT14I CCWWGG 2 cut(s) 463, 753
EcoT38I GRGCYC 2 cut(s) 403, 837
ErhI CCWWGG 2 cut(s) 463, 753
Esp3I CGTCTC 1 cut(s) 1070
FaeI CATG 6 cut(s) 46, 467, 604, 944, 1015, 1157
FaqI GGGAC 2 cut(s) 785, 894
FatI CATG 6 cut(s) 42, 463, 600, 940, 1011, 1153
FauI CCCGC 1 cut(s) 1031
FblI GTMKAC 1 cut(s) 354
Fnu4HI GCNGC 6 cut(s) 703, 866, 930, 992, 1062, 1179
FokI GGATG 6 cut(s) 103, 566, 707, 767, 884, 1106
FriOI GRGCYC 2 cut(s) 403, 837
Fsp4HI GCNGC 6 cut(s) 703, 866, 930, 992, 1062, 1179
FspBI CTAG 2 cut(s) 623, 674
GluI GCNGC 6 cut(s) 703, 866, 930, 992, 1062, 1179
GsuI CTGGAG 1 cut(s) 851
HaeIII GGCC 4 cut(s) 471, 659, 705, 1145
HapII CCGG 5 cut(s) 24, 665, 869, 1091, 1137
HgaI GACGC 2 cut(s) 409, 1087
Hin1I GRCGYC 1 cut(s) 420
Hin1II CATG 6 cut(s) 46, 467, 604, 944, 1015, 1157
HinfI GANTC 7 cut(s) 18, 318, 323, 347, 694, 907, 1102
HpaII CCGG 5 cut(s) 24, 665, 869, 1091, 1137
HphI GGTGA 9 cut(s) 13, 235, 529, 569, 587, 679, 728, 803, 1097
Hpy166II GTNNAC 6 cut(s) 339, 355, 498, 560, 670, 1048
Hpy188I TCNGA 1 cut(s) 184
Hpy8I GTNNAC 6 cut(s) 339, 355, 498, 560, 670, 1048
HpyAV CCTTC 3 cut(s) 214, 912, 1128
HpyCH4III ACNGT 2 cut(s) 262, 502
HpyCH4IV ACGT 1 cut(s) 376
HpyCH4V TGCA 5 cut(s) 383, 940, 994, 1027, 1153
HpyF10VI GCNNNNNNNGC 3 cut(s) 711, 991, 1159
HpyF3I CTNAG 3 cut(s) 129, 183, 1182
HpySE526I ACGT 1 cut(s) 376
Hsp92I GRCGYC 1 cut(s) 420
Hsp92II CATG 6 cut(s) 46, 467, 604, 944, 1015, 1157
KspI CCGCGG 1 cut(s) 703
Kzo9I GATC 4 cut(s) 175, 577, 735, 855
LguI GCTCTTC 1 cut(s) 749
LmnI GCTCC 3 cut(s) 362, 398, 832
Lsp1109I GCAGC 4 cut(s) 852, 941, 978, 1165
LweI GCATC 2 cut(s) 1084, 1149
MaeI CTAG 2 cut(s) 623, 674
MaeII ACGT 1 cut(s) 376
MaeIII GTNAC 6 cut(s) 19, 509, 524, 592, 716, 757
MalI GATC 4 cut(s) 177, 579, 737, 857
MboI GATC 4 cut(s) 175, 577, 735, 855
MboII GAAGA 3 cut(s) 229, 530, 736
MhlI GDGCHC 3 cut(s) 267, 403, 837
MlyI GAGTC 2 cut(s) 27, 916
MmeI TCCRAC 3 cut(s) 181, 352, 996
MnlI CCTC 4 cut(s) 178, 389, 734, 1135
MseI TTAA 4 cut(s) 330, 413, 474, 768
MslI CAYNNNNRTG 1 cut(s) 665
MspA1I CMGCKG 3 cut(s) 702, 714, 1178
MspI CCGG 5 cut(s) 24, 665, 869, 1091, 1137
MspR9I CCNGG 5 cut(s) 573, 830, 987, 1091, 1137
MvaI CCWGG 3 cut(s) 573, 830, 987
MvnI CGCG 1 cut(s) 702
MwoI GCNNNNNNNGC 3 cut(s) 711, 991, 1159
NciI CCSGG 2 cut(s) 1091, 1137
NcoI CCATGG 1 cut(s) 463
NdeII GATC 4 cut(s) 175, 577, 735, 855
NlaIII CATG 6 cut(s) 46, 467, 604, 944, 1015, 1157
NlaIV GGNNCC 4 cut(s) 256, 364, 751, 834
NmuCI GTSAC 4 cut(s) 19, 509, 524, 716
NspI RCATGY 3 cut(s) 46, 1015, 1157
NspV TTCGAA 1 cut(s) 321
OliI CACNNNNGTG 1 cut(s) 665
PceI AGGCCT 1 cut(s) 1145
PciI ACATGT 1 cut(s) 1011
PciSI GCTCTTC 1 cut(s) 749
PfeI GAWTC 5 cut(s) 318, 323, 347, 694, 1102
PfoI TCCNGGA 2 cut(s) 828, 1089
PinAI ACCGGT 1 cut(s) 23
PkrI GCNGC 6 cut(s) 704, 867, 931, 993, 1063, 1180
Ple19I CGATCG 1 cut(s) 178
PleI GAGTC 2 cut(s) 26, 915
PpsI GAGTC 2 cut(s) 26, 915
PscI ACATGT 1 cut(s) 1011
Psp124BI GAGCTC 1 cut(s) 403
Psp6I CCWGG 3 cut(s) 571, 828, 985
PspGI CCWGG 3 cut(s) 571, 828, 985
PspN4I GGNNCC 4 cut(s) 256, 364, 751, 834
PspPI GGNCC 2 cut(s) 750, 975
PstI CTGCAG 1 cut(s) 996
PvuI CGATCG 1 cut(s) 178
PvuII CAGCTG 1 cut(s) 1178
RsaI GTAC 2 cut(s) 338, 1049
RsaNI GTAC 2 cut(s) 337, 1048
RseI CAYNNNNRTG 1 cut(s) 665
SacI GAGCTC 1 cut(s) 403
SacII CCGCGG 1 cut(s) 703
SapI GCTCTTC 1 cut(s) 749
SaqAI TTAA 4 cut(s) 330, 413, 474, 768
SatI GCNGC 6 cut(s) 703, 866, 930, 992, 1062, 1179
Sau3AI GATC 4 cut(s) 175, 577, 735, 855
Sau96I GGNCC 2 cut(s) 750, 975
SchI GAGTC 2 cut(s) 27, 916
ScrFI CCNGG 5 cut(s) 573, 830, 987, 1091, 1137
SduI GDGCHC 3 cut(s) 267, 403, 837
SfaNI GCATC 2 cut(s) 1084, 1149
SfcI CTRYAG 1 cut(s) 992
Sfr303I CCGCGG 1 cut(s) 703
SfuI TTCGAA 1 cut(s) 321
SgrBI CCGCGG 1 cut(s) 703
SinI GGWCC 2 cut(s) 750, 975
SmiMI CAYNNNNRTG 1 cut(s) 665
SseBI AGGCCT 1 cut(s) 1145
SsiI CCGC 5 cut(s) 700, 702, 714, 1038, 1062
SspMI CTAG 2 cut(s) 623, 674
SstI GAGCTC 1 cut(s) 403
StuI AGGCCT 1 cut(s) 1145
StyD4I CCNGG 5 cut(s) 571, 828, 985, 1089, 1135
StyI CCWWGG 2 cut(s) 463, 753
TaaI ACNGT 2 cut(s) 262, 502
TaiI ACGT 1 cut(s) 379
TaqI TCGA 3 cut(s) 174, 321, 905
TatI WGTACW 2 cut(s) 336, 1047
TauI GCSGC 2 cut(s) 705, 1064
TfiI GAWTC 5 cut(s) 318, 323, 347, 694, 1102
Tru1I TTAA 4 cut(s) 330, 413, 474, 768
Tru9I TTAA 4 cut(s) 330, 413, 474, 768
TscAI CASTG 5 cut(s) 265, 490, 793, 939, 1071
TseFI GTSAC 4 cut(s) 19, 509, 524, 716
TseI GCWGC 4 cut(s) 865, 929, 991, 1178
Tsp45I GTSAC 4 cut(s) 19, 509, 524, 716
TspDTI ATGAA 3 cut(s) 105, 207, 225
TspGWI ACGGA 3 cut(s) 153, 259, 306
TspRI CASTG 5 cut(s) 265, 490, 793, 939, 1071
VpaK11BI GGWCC 2 cut(s) 750, 975
XagI CCTNNNNNAGG 1 cut(s) 807
XapI RAATTY 3 cut(s) 49, 72, 1111
XceI RCATGY 3 cut(s) 46, 1015, 1157
XmiI GTMKAC 1 cut(s) 354
XspI CTAG 2 cut(s) 623, 674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.