Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0003165

Physical Location & Seq

Genomic Coordinates Reverse (-)

2726539 .. 2729571

Gene Structure 3033 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGGAGGAAGGGTTTGGAATTGTGGAGGACGAAAATGGGGGTTTGGTGCTGTGTCCTCTGTGTGGGGCTGACATTTCGGATTTGAGCGACGAAGAGAGGCAGGTCCATAGCAATGAGTGTCTTGACGAAGAGGAAGTTCAAGCTCAAGACGCTCCGTTTCCTGATGAGGAAAGGGGGCATCAAAATTCCGGGCAAGTTCTTGAGTGGCTGCGCAGCCTGGGATTAGAGAAGTACAAGGATGTTTTTGTTCAAGAAGAGATTGATTGGGACACTCTACAATGGCTCACAGAAGAGGATTTGTTTAGCATAGGCATTACTGCACTTGGTCCGCGGAAGAAGATTGTGCATGCCCTTGCTCAACTTAGAGAAGGTGCCACTACTACTACTAGTAGTTCAACTGAAGCACAACCAAGAAAAAGGAGAGCCAATGGAGTCGATATGCCCAATGATACTTCAGAAGCACCAGTTAATGATGTTAGTAAAACAGCTGCAAACAAATTGATCACAGATTACTTCCCGGGATTTGGAGCTGCTAGGAAGCAAGTTTGCACCACCTCTAGAGAACAGCGAAGGGTCGAAAAACGGGTGCCACGTTCTGGTCAGAAACGTGGTGTGGAAAACAATAATGCCACAAATCGGAAACTCAGGGATATTCCCTCGTGGTGTTGCATACCAGGAACACCATTTCGAGTGGACGCTTTCAAATATCTTAGACGGGATTGTTCGCATTGGTTTCTAACTCACTTTCATATGGATCATTATCAAGGTCTAACGAAGTCCTTCTGTCACGGAAAGATTTATTGCTCCTCCATCACAGCTAAGCTTGTAAATATGAAGATTGGCATTCCATGGGACAGTATACAGGTTGTACCCGTCAACCAAAAGATGAATATTTCTGGTATTAATGTGACCTGCTTGGATGCAAACCACTGTCCTGGTTCGATAATTATACTTTTCGAACCACCCGACGGTAAGGCTGTTCTGCATACAGGGGACTTTCGCTATAGCGACAGCGCAGCAAGCATGTCTTTTTTGCAAACATGTTCTATCCATACTCTCATCCTTGATACCACTTATTGTAATCCACAGTATGATTTTCCAAAGCAGGAGGCTGTAATACAGTTCGTCATTGATGCCATTCAAGCTGAAACTTTCAACCCTAAAACTCTATTTCTGATCGGCAGCTACACTATTGGAAAGGAACGACTTTTTTTGGAGGTTGCTCGTGTGCTCCGGAAAAAGATTTATGTTAATGCAGGAAAGCTGCATACTTTAAAATGCTTGGATTTTCCTGAAGAAGATATGCAGTGGTTTACATTAAACGAACAGGAAAGCCATATCCATGTGGTCCCTATGTGGACACTTGCAAGCTTCAAGCGACTGAAGCATATTTCCAATCAATACTCGAGTCGATTCAGCCTTATCGTTGCTTTCTCTCCAACTGGTTGGACTTTTGGTAAAGGAAAGAAGAAGTCCCCGGGAAGAAGATCACAGCAGGGTACCGTTATAAGGTATGAGGTGCCATACAGCGAGCATTCCAGCTTTACAGAACTCAGAGAGTTTGTGAAGCTTGTTTCTCCAGTGGAAATAATACCTAGTGTGAATAATCACGGACCAGATTCTGCCAAGGCCATGGTTTCTCTGTTGTCATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000715 GO:0000723 GO:0000726 GO:0000781 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0004518 GO:0004527 GO:0004529 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0008409 GO:0009987 GO:0016043 GO:0016233 GO:0016787 GO:0016788 GO:0016796 GO:0016895 GO:0031848 GO:0031974 GO:0031981 GO:0032200 GO:0033554 GO:0034641 GO:0035312 GO:0036297 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043247 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098687 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DRMBL Lactamase_B_2 SAM_1

Protein Analysis

552

Amino Acids

62.2

Weight (kDa)

6.4

Isoelectric Point (pI)

47.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAM_1	PF00536	63 - 122	1.2e-19	SAM domain (Sterile alpha motif)
SAM_2	PF07647	63 - 122	1.2e-12	SAM domain (Sterile alpha motif)
DRMBL	PF07522	434 - 537	7.2e-27	DNA repair metallo-beta-lactamase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45700 AT2G45700 AT3G26680 AT3G26680 AT3G26680 AT3G26680
fragaria_vesca	FvH4_2g36980 FvH4_2g36980 FvH4_2g36980 FvH4_2g36980
prunus_persica	Prupe.1G401600_v2.0.a1 Prupe.1G401600_v2.0.a1 Prupe.1G401600_v2.0.a1
pyrus_communis	pycom15g04570
rosa_chinensis	RchiOBHm_Chr6g0304781
rosa_laevigata	RLG00000009558 RLG00000010950 RLG00000018503 RLG00000033826
rosa_multiflora	Rmu_sc0003120.1_g000004 Rmu_sc0007437.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010130 Rroxscaffold_5G00359510 Rroxscaffold_7G00163500
rosa_rugosa	Rorug06G0334500
rosa_samantha	Rh1CG059900 Rh1DG063900 Rh4DG405200 Rh6AG132400 Rh6AG446400 Rh6BG129800 Rh6BG455200 Rh6CG128100 Rh6CG459900 Rh6DG115200 Rh6DG446700
rosa_wichuraiana	Rw6G038840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1508
Acc16I	TGCGCA	1 cut(s)	212
Acc36I	ACCTGC	2 cut(s)	91, 920
Acc65I	GGTACC	1 cut(s)	1499
AccB1I	GGYRCC	4 cut(s)	371, 586, 1499, 1519
AccB7I	CCANNNNNTGG	1 cut(s)	596
AccI	GTMKAC	1 cut(s)	859
AccII	CGCG	1 cut(s)	331
AccIII	TCCGGA	1 cut(s)	1233
AciI	CCGC	2 cut(s)	329, 331
AclWI	GGATC	1 cut(s)	762
AcsI	RAATTY	1 cut(s)	184
AcuI	CTGAAG	4 cut(s)	420, 438, 1314, 1403
AfaI	GTAC	3 cut(s)	233, 870, 1501
AfiI	CCNNNNNNNGG	6 cut(s)	62, 524, 596, 636, 968, 1509
AflIII	ACRYGT	1 cut(s)	1040
AgsI	TTSAA	7 cut(s)	140, 251, 396, 703, 1142, 1156, 1375
AhlI	ACTAGT	1 cut(s)	386
AjnI	CCWGG	3 cut(s)	216, 673, 934
Alw21I	GWGCWC	1 cut(s)	1233
AlwI	GGATC	1 cut(s)	762
AlwNI	CAGNNNCTG	1 cut(s)	1622
Ama87I	CYCGRG	3 cut(s)	517, 1405, 1477
Aor13HI	TCCGGA	1 cut(s)	1233
AoxI	GGCC	1 cut(s)	1629
ApeKI	GCWGC	7 cut(s)	208, 213, 488, 530, 1016, 1182, 1264
ApoI	RAATTY	1 cut(s)	184
AseI	ATTAAT	1 cut(s)	903
Asp700I	GAANNNNTTC	1 cut(s)	779
Asp718I	GGTACC	1 cut(s)	1499
AspLEI	GCGC	2 cut(s)	213, 1016
AspS9I	GGNCC	4 cut(s)	103, 326, 1348, 1613
AsuC2I	CCSGG	5 cut(s)	190, 518, 519, 1478, 1479
AsuII	TTCGAA	1 cut(s)	957
AvaI	CYCGRG	3 cut(s)	517, 1405, 1477
AvaII	GGWCC	4 cut(s)	103, 326, 1348, 1613
BanI	GGYRCC	4 cut(s)	371, 586, 1499, 1519
BauI	CACGAG	2 cut(s)	658, 1224
Bbv12I	GWGCWC	1 cut(s)	1233
BbvI	GCAGC	7 cut(s)	195, 225, 475, 517, 1028, 1194, 1251
BccI	CCATC	1 cut(s)	818
BciT130I	CCWGG	3 cut(s)	218, 675, 936
BclI	TGATCA	1 cut(s)	501
BcnI	CCSGG	5 cut(s)	190, 518, 519, 1478, 1479
BcuI	ACTAGT	1 cut(s)	386
BfaI	CTAG	4 cut(s)	387, 534, 558, 1596
BfmI	CTRYAG	1 cut(s)	1003
BfuAI	ACCTGC	2 cut(s)	91, 920
BisI	GCNGC	7 cut(s)	209, 214, 489, 531, 1017, 1183, 1265
BlpI	GCTNAGC	1 cut(s)	819
BlsI	GCNGC	7 cut(s)	210, 215, 490, 532, 1018, 1184, 1266
Bme1390I	CCNGG	8 cut(s)	190, 218, 518, 519, 675, 936, 1478, 1479
Bme18I	GGWCC	4 cut(s)	103, 326, 1348, 1613
BmeT110I	CYCGRG	3 cut(s)	517, 1405, 1477
BmgT120I	GGNCC	4 cut(s)	103, 326, 1348, 1613
BmiI	GGNNCC	5 cut(s)	373, 588, 1350, 1501, 1521
BmrFI	CCNGG	8 cut(s)	190, 218, 518, 519, 675, 936, 1478, 1479
BmsI	GCATC	3 cut(s)	187, 910, 1123
BpmI	CTGGAG	1 cut(s)	1563
Bpu1102I	GCTNAGC	1 cut(s)	819
Bpu14I	TTCGAA	1 cut(s)	957
BpuEI	CTTGAG	2 cut(s)	129, 221
BpuMI	CCSGG	5 cut(s)	190, 518, 519, 1478, 1479
BsaBI	GATNNNNATC	1 cut(s)	759
BsaJI	CCNNGG	8 cut(s)	217, 329, 517, 848, 1476, 1477, 1626, 1632
BsaWI	WCCGGW	1 cut(s)	1233
BsaXI	ACNNNNNCTCC	1 cut(s)	26
Bsc4I	CCNNNNNNNGG	6 cut(s)	62, 524, 596, 636, 968, 1509
Bse1I	ACTGG	3 cut(s)	464, 1447, 1580
Bse3DI	GCAATG	1 cut(s)	118
Bse8I	GATNNNNATC	1 cut(s)	759
BseAI	TCCGGA	1 cut(s)	1233
BseBI	CCWGG	3 cut(s)	218, 675, 936
BseDI	CCNNGG	8 cut(s)	217, 329, 517, 848, 1476, 1477, 1626, 1632
BseGI	GGATG	3 cut(s)	244, 925, 1059
BseJI	GATNNNNATC	1 cut(s)	759
BseLI	CCNNNNNNNGG	6 cut(s)	62, 524, 596, 636, 968, 1509
BseMI	GCAATG	1 cut(s)	118
BseMII	CTCAG	2 cut(s)	658, 1567
BseNI	ACTGG	3 cut(s)	464, 1447, 1580
BseRI	GAGGAG	1 cut(s)	796
BseXI	GCAGC	7 cut(s)	195, 225, 475, 517, 1028, 1194, 1251
BsgI	GTGCAG	1 cut(s)	303
Bsh1236I	CGCG	1 cut(s)	331
BshFI	GGCC	1 cut(s)	1631
BshNI	GGYRCC	4 cut(s)	371, 586, 1499, 1519
BsiHKAI	GWGCWC	1 cut(s)	1233
BsiHKCI	CYCGRG	3 cut(s)	517, 1405, 1477
BsiSI	CCGG	4 cut(s)	189, 518, 1234, 1478
BslFI	GGGAC	5 cut(s)	281, 866, 1007, 1334, 1459
BslI	CCNNNNNNNGG	6 cut(s)	62, 524, 596, 636, 968, 1509
BsmFI	GGGAC	5 cut(s)	281, 866, 1007, 1334, 1459
BsmI	GAATGC	2 cut(s)	843, 1534
BsnI	GGCC	1 cut(s)	1631
BsoBI	CYCGRG	3 cut(s)	517, 1405, 1477
Bsp119I	TTCGAA	1 cut(s)	957
Bsp1286I	GDGCHC	1 cut(s)	1233
Bsp13I	TCCGGA	1 cut(s)	1233
Bsp143I	GATC	4 cut(s)	501, 754, 1176, 1487
Bsp1720I	GCTNAGC	1 cut(s)	819
Bsp19I	CCATGG	2 cut(s)	848, 1632
BspACI	CCGC	2 cut(s)	329, 331
BspANI	GGCC	1 cut(s)	1631
BspCNI	CTCAG	2 cut(s)	657, 1566
BspEI	TCCGGA	1 cut(s)	1233
BspFNI	CGCG	1 cut(s)	331
BspLI	GGNNCC	5 cut(s)	373, 588, 1350, 1501, 1521
BspMI	ACCTGC	2 cut(s)	91, 920
BspPI	GGATC	1 cut(s)	762
BspT104I	TTCGAA	1 cut(s)	957
BspT107I	GGYRCC	4 cut(s)	371, 586, 1499, 1519
BsrDI	GCAATG	1 cut(s)	118
BsrI	ACTGG	3 cut(s)	464, 1447, 1580
BssECI	CCNNGG	8 cut(s)	217, 329, 517, 848, 1476, 1477, 1626, 1632
BssMI	GATC	4 cut(s)	501, 754, 1176, 1487
BssNAI	GTATAC	1 cut(s)	860
BssSI	CACGAG	2 cut(s)	658, 1224
BssT1I	CCWWGG	3 cut(s)	848, 1626, 1632
Bst1107I	GTATAC	1 cut(s)	860
Bst2BI	CACGAG	2 cut(s)	658, 1224
Bst2UI	CCWGG	3 cut(s)	218, 675, 936
Bst4CI	ACNGT	6 cut(s)	857, 932, 971, 1089, 1122, 1504
Bst6I	CTCTTC	4 cut(s)	87, 123, 249, 285
BstBI	TTCGAA	1 cut(s)	957
BstC8I	GCNNGC	4 cut(s)	348, 1021, 1369, 1532
BstDEI	CTNAG	5 cut(s)	362, 644, 710, 819, 1553
BstDSI	CCRYGG	3 cut(s)	329, 848, 1632
BstF5I	GGATG	3 cut(s)	244, 925, 1059
BstFNI	CGCG	1 cut(s)	331
BstHHI	GCGC	2 cut(s)	213, 1016
BstKTI	GATC	4 cut(s)	504, 757, 1179, 1490
BstMBI	GATC	4 cut(s)	501, 754, 1176, 1487
BstMWI	GCNNNNNNNGC	4 cut(s)	149, 1020, 1142, 1384
BstNI	CCWGG	3 cut(s)	218, 675, 936
BstNSI	RCATGY	3 cut(s)	350, 1027, 1044
BstSCI	CCNGG	8 cut(s)	188, 216, 516, 517, 673, 934, 1476, 1477
BstSFI	CTRYAG	1 cut(s)	1003
BstUI	CGCG	1 cut(s)	331
BstV1I	GCAGC	7 cut(s)	195, 225, 475, 517, 1028, 1194, 1251
BstXI	CCANNNNNNTGG	3 cut(s)	935, 1446, 1633
BstZ17I	GTATAC	1 cut(s)	860
BsuRI	GGCC	1 cut(s)	1631
BtgI	CCRYGG	3 cut(s)	329, 848, 1632
BtsCI	GGATG	3 cut(s)	244, 925, 1059
BtsI	GCAGTG	1 cut(s)	1313
BtsIMutI	CAGTG	3 cut(s)	928, 1313, 1587
BveI	ACCTGC	2 cut(s)	91, 920
Cac8I	GCNNGC	4 cut(s)	348, 1021, 1369, 1532
CaiI	CAGNNNCTG	1 cut(s)	1622
CfoI	GCGC	2 cut(s)	213, 1016
Cfr13I	GGNCC	4 cut(s)	103, 326, 1348, 1613
Cfr42I	CCGCGG	1 cut(s)	332
Cfr9I	CCCGGG	2 cut(s)	517, 1477
CseI	GACGC	2 cut(s)	158, 704
Csp6I	GTAC	3 cut(s)	232, 869, 1500
CviAII	CATG	6 cut(s)	347, 849, 1024, 1041, 1343, 1633
CviQI	GTAC	3 cut(s)	232, 869, 1500
DdeI	CTNAG	5 cut(s)	362, 644, 710, 819, 1553
DpnI	GATC	4 cut(s)	503, 756, 1178, 1489
DpnII	GATC	4 cut(s)	501, 754, 1176, 1487
DraI	TTTAAA	1 cut(s)	1275
Eam1104I	CTCTTC	4 cut(s)	87, 123, 249, 285
EarI	CTCTTC	4 cut(s)	87, 123, 249, 285
Eco130I	CCWWGG	3 cut(s)	848, 1626, 1632
Eco47I	GGWCC	4 cut(s)	103, 326, 1348, 1613
Eco57I	CTGAAG	4 cut(s)	420, 438, 1314, 1403
Eco88I	CYCGRG	3 cut(s)	517, 1405, 1477
EcoRII	CCWGG	3 cut(s)	216, 673, 934
EcoT14I	CCWWGG	3 cut(s)	848, 1626, 1632
ErhI	CCWWGG	3 cut(s)	848, 1626, 1632
FaeI	CATG	6 cut(s)	350, 852, 1027, 1044, 1346, 1636
FalI	AAGNNNNNCTT	2 cut(s)	1012, 1044
FaqI	GGGAC	5 cut(s)	281, 866, 1007, 1334, 1459
FatI	CATG	6 cut(s)	346, 848, 1023, 1040, 1342, 1632
FauNDI	CATATG	1 cut(s)	750
FbaI	TGATCA	1 cut(s)	501
FblI	GTMKAC	1 cut(s)	859
Fnu4HI	GCNGC	7 cut(s)	209, 214, 489, 531, 1017, 1183, 1265
FokI	GGATG	3 cut(s)	251, 932, 1046
Fsp4HI	GCNGC	7 cut(s)	209, 214, 489, 531, 1017, 1183, 1265
FspBI	CTAG	4 cut(s)	387, 534, 558, 1596
FspI	TGCGCA	1 cut(s)	212
GlaI	GCGC	2 cut(s)	212, 1015
GluI	GCNGC	7 cut(s)	209, 214, 489, 531, 1017, 1183, 1265
GsuI	CTGGAG	1 cut(s)	1563
HaeIII	GGCC	1 cut(s)	1631
HapII	CCGG	4 cut(s)	189, 518, 1234, 1478
HgaI	GACGC	2 cut(s)	158, 704
HhaI	GCGC	2 cut(s)	213, 1016
Hin1II	CATG	6 cut(s)	350, 852, 1027, 1044, 1346, 1636
Hin6I	GCGC	2 cut(s)	211, 1014
HinP1I	GCGC	2 cut(s)	211, 1014
HincII	GTYRAC	1 cut(s)	877
HindII	GTYRAC	1 cut(s)	877
HindIII	AAGCTT	3 cut(s)	821, 1369, 1568
HinfI	GANTC	4 cut(s)	432, 1408, 1413, 1619
HpaII	CCGG	4 cut(s)	189, 518, 1234, 1478
Hpy166II	GTNNAC	5 cut(s)	694, 860, 877, 1314, 1359
Hpy188I	TCNGA	6 cut(s)	79, 457, 603, 639, 1176, 1556
Hpy188III	TCNNGA	8 cut(s)	122, 146, 161, 200, 251, 558, 1234, 1292
Hpy8I	GTNNAC	5 cut(s)	694, 860, 877, 1314, 1359
Hpy99I	CGWCG	2 cut(s)	92, 971
HpyAV	CCTTC	3 cut(s)	362, 564, 790
HpyCH4III	ACNGT	6 cut(s)	857, 932, 971, 1089, 1122, 1504
HpyCH4IV	ACGT	2 cut(s)	592, 607
HpyF10VI	GCNNNNNNNGC	4 cut(s)	149, 1020, 1142, 1384
HpyF3I	CTNAG	5 cut(s)	362, 644, 710, 819, 1553
HpySE526I	ACGT	2 cut(s)	592, 607
Hsp92II	CATG	6 cut(s)	350, 852, 1027, 1044, 1346, 1636
HspAI	GCGC	2 cut(s)	211, 1014
Kpn2I	TCCGGA	1 cut(s)	1233
KpnI	GGTACC	1 cut(s)	1503
Ksp22I	TGATCA	1 cut(s)	501
KspI	CCGCGG	1 cut(s)	332
Kzo9I	GATC	4 cut(s)	501, 754, 1176, 1487
LmnI	GCTCC	4 cut(s)	157, 527, 809, 1236
Lsp1109I	GCAGC	7 cut(s)	195, 225, 475, 517, 1028, 1194, 1251
LweI	GCATC	3 cut(s)	187, 910, 1123
MaeI	CTAG	4 cut(s)	387, 534, 558, 1596
MaeII	ACGT	2 cut(s)	592, 607
MaeIII	GTNAC	2 cut(s)	785, 907
MalI	GATC	4 cut(s)	503, 756, 1178, 1489
MboI	GATC	4 cut(s)	501, 754, 1176, 1487
MhlI	GDGCHC	1 cut(s)	1233
MluCI	AATT	4 cut(s)	18, 184, 497, 945
MlyI	GAGTC	2 cut(s)	441, 1417
MmeI	TCCRAC	2 cut(s)	1427, 1463
MroI	TCCGGA	1 cut(s)	1233
MroXI	GAANNNNTTC	1 cut(s)	779
MseI	TTAA	6 cut(s)	468, 903, 1251, 1274, 1319, 1654
MslI	CAYNNNNRTG	2 cut(s)	111, 1341
MspA1I	CMGCKG	2 cut(s)	331, 488
MspI	CCGG	4 cut(s)	189, 518, 1234, 1478
MspR9I	CCNGG	8 cut(s)	190, 218, 518, 519, 675, 936, 1478, 1479
Mva1269I	GAATGC	2 cut(s)	843, 1534
MvaI	CCWGG	3 cut(s)	218, 675, 936
MvnI	CGCG	1 cut(s)	331
MwoI	GCNNNNNNNGC	4 cut(s)	149, 1020, 1142, 1384
NciI	CCSGG	5 cut(s)	190, 518, 519, 1478, 1479
NcoI	CCATGG	2 cut(s)	848, 1632
NdeI	CATATG	1 cut(s)	750
NdeII	GATC	4 cut(s)	501, 754, 1176, 1487
NlaIII	CATG	6 cut(s)	350, 852, 1027, 1044, 1346, 1636
NlaIV	GGNNCC	5 cut(s)	373, 588, 1350, 1501, 1521
NmuCI	GTSAC	2 cut(s)	785, 907
NsbI	TGCGCA	1 cut(s)	212
NspI	RCATGY	3 cut(s)	350, 1027, 1044
NspV	TTCGAA	1 cut(s)	957
PaeI	GCATGC	1 cut(s)	350
PaeR7I	CTCGAG	1 cut(s)	1405
PciI	ACATGT	1 cut(s)	1040
PcsI	WCGNNNNNNNCGW	2 cut(s)	589, 963
PctI	GAATGC	2 cut(s)	843, 1534
PdmI	GAANNNNTTC	1 cut(s)	779
PfeI	GAWTC	2 cut(s)	1413, 1619
PflMI	CCANNNNNTGG	1 cut(s)	596
PkrI	GCNGC	7 cut(s)	210, 215, 490, 532, 1018, 1184, 1266
PleI	GAGTC	2 cut(s)	440, 1416
PpsI	GAGTC	2 cut(s)	440, 1416
PscI	ACATGT	1 cut(s)	1040
PshBI	ATTAAT	1 cut(s)	903
PsiI	TTATAA	1 cut(s)	1508
Psp6I	CCWGG	3 cut(s)	216, 673, 934
PspGI	CCWGG	3 cut(s)	216, 673, 934
PspN4I	GGNNCC	5 cut(s)	373, 588, 1350, 1501, 1521
PspPI	GGNCC	4 cut(s)	103, 326, 1348, 1613
PspXI	VCTCGAGB	1 cut(s)	1405
PstNI	CAGNNNCTG	1 cut(s)	1622
PvuII	CAGCTG	1 cut(s)	488
RsaI	GTAC	3 cut(s)	233, 870, 1501
RsaNI	GTAC	3 cut(s)	232, 869, 1500
RseI	CAYNNNNRTG	2 cut(s)	111, 1341
SacII	CCGCGG	1 cut(s)	332
SaqAI	TTAA	6 cut(s)	468, 903, 1251, 1274, 1319, 1654
SatI	GCNGC	7 cut(s)	209, 214, 489, 531, 1017, 1183, 1265
Sau3AI	GATC	4 cut(s)	501, 754, 1176, 1487
Sau96I	GGNCC	4 cut(s)	103, 326, 1348, 1613
SchI	GAGTC	2 cut(s)	441, 1417
ScrFI	CCNGG	8 cut(s)	190, 218, 518, 519, 675, 936, 1478, 1479
SduI	GDGCHC	1 cut(s)	1233
SfaNI	GCATC	3 cut(s)	187, 910, 1123
SfcI	CTRYAG	1 cut(s)	1003
Sfr274I	CTCGAG	1 cut(s)	1405
Sfr303I	CCGCGG	1 cut(s)	332
SfuI	TTCGAA	1 cut(s)	957
SgrBI	CCGCGG	1 cut(s)	332
SinI	GGWCC	4 cut(s)	103, 326, 1348, 1613
SlaI	CTCGAG	1 cut(s)	1405
SmaI	CCCGGG	2 cut(s)	519, 1479
SmiMI	CAYNNNNRTG	2 cut(s)	111, 1341
SmlI	CTYRAG	3 cut(s)	144, 200, 1405
SmoI	CTYRAG	3 cut(s)	144, 200, 1405
SpeI	ACTAGT	1 cut(s)	386
SphI	GCATGC	1 cut(s)	350
Sse9I	AATT	4 cut(s)	18, 184, 497, 945
SsiI	CCGC	2 cut(s)	329, 331
SspI	AATATT	1 cut(s)	892
SspMI	CTAG	4 cut(s)	387, 534, 558, 1596
StyD4I	CCNGG	8 cut(s)	188, 216, 516, 517, 673, 934, 1476, 1477
StyI	CCWWGG	3 cut(s)	848, 1626, 1632
TaaI	ACNGT	6 cut(s)	857, 932, 971, 1089, 1122, 1504
TaiI	ACGT	2 cut(s)	595, 610
TaqI	TCGA	7 cut(s)	435, 576, 688, 941, 957, 1406, 1411
TasI	AATT	4 cut(s)	18, 184, 497, 945
TatI	WGTACW	1 cut(s)	231
TfiI	GAWTC	2 cut(s)	1413, 1619
Tru1I	TTAA	6 cut(s)	468, 903, 1251, 1274, 1319, 1654
Tru9I	TTAA	6 cut(s)	468, 903, 1251, 1274, 1319, 1654
TscAI	CASTG	3 cut(s)	935, 1313, 1587
TseFI	GTSAC	2 cut(s)	785, 907
TseI	GCWGC	7 cut(s)	208, 213, 488, 530, 1016, 1182, 1264
Tsp45I	GTSAC	2 cut(s)	785, 907
TspDTI	ATGAA	3 cut(s)	737, 848, 902
TspGWI	ACGGA	3 cut(s)	144, 804, 1626
TspMI	CCCGGG	2 cut(s)	517, 1477
TspRI	CASTG	3 cut(s)	935, 1313, 1587
Van91I	CCANNNNNTGG	1 cut(s)	596
VpaK11BI	GGWCC	4 cut(s)	103, 326, 1348, 1613
VspI	ATTAAT	1 cut(s)	903
XapI	RAATTY	1 cut(s)	184
XbaI	TCTAGA	1 cut(s)	557
XceI	RCATGY	3 cut(s)	350, 1027, 1044
XhoI	CTCGAG	1 cut(s)	1405
XmaI	CCCGGG	2 cut(s)	517, 1477
XmiI	GTMKAC	1 cut(s)	859
XmnI	GAANNNNTTC	1 cut(s)	779
XspI	CTAG	4 cut(s)	387, 534, 558, 1596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.