Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003165

Physical Location & Seq

Genomic Coordinates Reverse (-)

63961208 .. 63965582

Gene Structure 4375 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ27388

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGGCTTCCAAATCCAGAATCAACCTCATAGACGACGACGACGACGATTTCCAAACCCCTCTGACCCAAACCGCCACAGCTCGCACGCCCTTCAAAAAGCCCATCGCCTCCGGCAAAGAAAACGTTCCTCCTCCGCTTTGCTTCACCCCCAAAGACTCCATTTTGAACCAAACCCAGGTCTCCAAATCCACGCCAATCGAAGACTGCAGCTTGGATTCGCTGCCTGAAAGCCTCGACTGGGCCACCCACGGCGCCGCTGCTTCTGCGTGCGTGGGGGAGGAAAGTGAGAAAGGGCAAGGGGGGTATTTTCGGAATTCGATAGAGTCTAGGTTGATTAAGCCCGGAGCCGATTGGGGTTTTGGTTCTGGAAATGGCGAGGAGATTGATGTGCTGCTGCTGAGGCTGAATGGGATTGAGGAAGAAGGGGAAGGAATTGTTGACGATGAAAATGGGGGTTTGGTGGTTCAGTGCCCTCTATGTGAAATTGACATTTCTGAGCTGAGCAATGAAGAAAGACAGCTCCACACTAATGATTGTCTTGACAAACAACAAGTTCGACCTCTAGACGAACAAGAGGCGTCTGGAATTGCTGATGATCCGATGAGGCCTCGAGTTTCTGGGCAAGTTGTTGAGTGGCTACGTGGTCTTGGTTTAGACAAGTATGAGCAAGTTTTTATAAGGGAAGAGATTGATTGGGATGCTCTACAGTGGCTCACAGAAGAGGATTTGTTTAACATTGGCATTACAGCACTTGGTCCGCGTAAGAAGATTGTGCATGCGCTCGCTCAACTTAGACAAGGGACTAGCAATGGAATTGAAGCACAAACTGCACAACCAAGAAAAAGGAGTGCCAATGGGGTCGAGGTTCTCGATGATGCATTGGAAGGAACAGTTGGTGATAGTAGTAAATCAGCTTCAAACAAGTTGATTACGGATTACTTTCCGGGATTTGGTGGTGCTAGGAAGCATGTCTGCACCACCTCCAGAGAACAGCAAAGGGTAGAAAAGCGTCAGTCAGCTGCTGGTCATAAACGTGTTGTGGTGAAAAATCATGCCACCAATAGGAAACTCAGGGATGTTCCCTCATGGTGTCGTGTACCAGGAACACCATTTCGAGTAGATGCTTTTAAATATCTTAGACGGGATTGCTCTCATTGGTTTCTCACTCACTTTCATATGGACCATTATCAAGGTTTAACAAAGTCCTTTTGTCATGGAAAGATCTATTGCTCCTCCATTACAGCTAAGCTTGTAAACATGAAGCTTGGCATTCCATGGGACAGTATACAAGTTGTACCCCTCAACCGAAAGATCAATATTGCAGGTATTGATGTCACCTGCTTGGATGCAAACCACTGCCCTGGTTCCATAATTATACTTTTTGAACCGCCTAACAGTAAGGCTGTTCTACATACAGGTGACTTTCGCTTTAGTGAGGATGCAGCAAGCATGACTGTTTTGCGAACATCTTCTATTCATACGCTCATCCTTGATACCACTTACTGTAACCCACAGTATGACTTTCCAAAGCAGGAGGCTGTAATTCAGTTTGTCGTTGATGCAATTCAAGCTGAAACTTTCAATCCTAAAACTCTATTTCTGATTGGCAGCTACACAATTGGAAAGGAACGCCTTTACTTGGAGGTTGCTCGTGTGCTCCGGAAAAAGATTTATGTCACTGCTGGAAAGCTGCATATTTTAAAATGTTTGGATTTTCCTGAGGAGGATATGCAGTGGTTTACATTAAACGAACATGAAAGCCAAATTCATGTGGTGCCGATGTGGACACTGGCAAGCTTCAAGCGACTGAAGCATGTATCAACTCAATATGCGAGTCGATACAGTCTTATTATTGCTTTCTCTCCAACTGGTTGGACTTTTGGTAAAGGAAAGAAGAAGTCTCCTGGAAGAAGGTGGCAGCAGGGTACCATTATAAGGTATGAGGTGCCATATAGTGAGCATTCAAGCTTTACAGAACTCAGACAGTTTGTGAAGCTTGTGTCCCCTGTACAAATAATACCAAGTGTGAACAATCATGGCCCAGATTCAGCGAATTCCATGATTTCTCTTCTCTCTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000715 GO:0000723 GO:0000726 GO:0000781 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0004518 GO:0004527 GO:0004529 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0008409 GO:0009987 GO:0016043 GO:0016233 GO:0016787 GO:0016788 GO:0016796 GO:0016895 GO:0031848 GO:0031974 GO:0031981 GO:0032200 GO:0033554 GO:0034641 GO:0035312 GO:0036297 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043247 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098687 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DRMBL Lactamase_B_2 SAM_1

Protein Analysis

693

Amino Acids

77.53

Weight (kDa)

6.23

Isoelectric Point (pI)

40.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAM_2	PF07647	207 - 265	4.8e-11	SAM domain (Sterile alpha motif)
SAM_1	PF00536	208 - 265	2.2e-16	SAM domain (Sterile alpha motif)
DRMBL	PF07522	576 - 679	9e-27	DNA repair metallo-beta-lactamase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45700 AT2G45700 AT3G26680 AT3G26680 AT3G26680 AT3G26680
fragaria_vesca	FvH4_2g36980 FvH4_2g36980 FvH4_2g36980 FvH4_2g36980
prunus_persica	Prupe.1G401600_v2.0.a1 Prupe.1G401600_v2.0.a1 Prupe.1G401600_v2.0.a1
pyrus_communis	pycom15g04570
rosa_chinensis	RchiOBHm_Chr6g0304781
rosa_laevigata	RLG00000009558 RLG00000010950 RLG00000018503 RLG00000033826
rosa_multiflora	Rmu_sc0003120.1_g000004 Rmu_sc0007437.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010130 Rroxscaffold_5G00359510 Rroxscaffold_7G00163500
rosa_rugosa	Rorug06G0334500
rosa_samantha	Rh1CG059900 Rh1DG063900 Rh4DG405200 Rh6AG132400 Rh6AG446400 Rh6BG129800 Rh6BG455200 Rh6CG128100 Rh6CG459900 Rh6DG115200 Rh6DG446700
rosa_wichuraiana	Rw6G038840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	677, 1934
AarI	CACCTGC	1 cut(s)	1346
Acc36I	ACCTGC	2 cut(s)	1313, 1346
Acc65I	GGTACC	1 cut(s)	1925
AccB1I	GGYRCC	4 cut(s)	251, 1774, 1925, 1945
AccI	GTMKAC	1 cut(s)	1285
AccII	CGCG	1 cut(s)	760
AccIII	TCCGGA	1 cut(s)	1659
AciI	CCGC	5 cut(s)	72, 134, 255, 758, 1388
AclI	AACGTT	1 cut(s)	123
AclWI	GGATC	1 cut(s)	590
AcsI	RAATTY	3 cut(s)	313, 1764, 2053
AcuI	CTGAAG	1 cut(s)	1829
AcyI	GRCGYC	2 cut(s)	252, 578
AfaI	GTAC	4 cut(s)	1098, 1296, 1927, 2010
AfiI	CCNNNNNNNGG	6 cut(s)	175, 238, 950, 1062, 1639, 1935
AflIII	ACRYGT	1 cut(s)	1033
AgsI	TTSAA	9 cut(s)	94, 166, 818, 918, 1385, 1568, 1582, 1801, 1965
AjnI	CCWGG	4 cut(s)	174, 1099, 1360, 1903
AjuI	GAANNNNNNNTTGG	2 cut(s)	876, 908
Alw21I	GWGCWC	1 cut(s)	1659
Alw26I	GTCTC	2 cut(s)	184, 1905
AlwI	GGATC	1 cut(s)	590
AlwNI	CAGNNNCTG	1 cut(s)	1022
Ama87I	CYCGRG	1 cut(s)	609
Aor13HI	TCCGGA	1 cut(s)	1659
AoxI	GGCC	3 cut(s)	240, 605, 2038
ApoI	RAATTY	3 cut(s)	313, 1764, 2053
Asp700I	GAANNNNTTC	2 cut(s)	123, 1468
Asp718I	GGTACC	1 cut(s)	1925
AspLEI	GCGC	2 cut(s)	254, 781
AspS9I	GGNCC	4 cut(s)	240, 755, 1180, 2039
AsuC2I	CCSGG	2 cut(s)	342, 945
AsuHPI	GGTGA	5 cut(s)	136, 908, 1054, 1327, 1430
AvaI	CYCGRG	1 cut(s)	609
AvaII	GGWCC	2 cut(s)	755, 1180
AxyI	CCTNAGG	1 cut(s)	1719
BaeGI	GKGCMC	1 cut(s)	473
BanI	GGYRCC	4 cut(s)	251, 1774, 1925, 1945
BarI	GAAGNNNNNNTAC	2 cut(s)	898, 930
BauI	CACGAG	1 cut(s)	1650
BbsI	GAAGAC	1 cut(s)	207
Bbv12I	GWGCWC	1 cut(s)	1659
BbvCI	CCTCAGC	1 cut(s)	398
BccI	CCATC	1 cut(s)	110
BceAI	ACGGC	1 cut(s)	265
BciT130I	CCWGG	4 cut(s)	176, 1101, 1362, 1905
BcnI	CCSGG	2 cut(s)	342, 945
BcoDI	GTCTC	2 cut(s)	184, 1905
BfaI	CTAG	4 cut(s)	327, 563, 804, 960
BfmI	CTRYAG	2 cut(s)	205, 704
BfoI	RGCGCY	1 cut(s)	255
BfuAI	ACCTGC	2 cut(s)	1313, 1346
BglII	AGATCT	1 cut(s)	1221
BlpI	GCTNAGC	2 cut(s)	500, 1245
Bme1390I	CCNGG	6 cut(s)	176, 342, 945, 1101, 1362, 1905
Bme18I	GGWCC	2 cut(s)	755, 1180
BmeT110I	CYCGRG	1 cut(s)	609
BmgT120I	GGNCC	4 cut(s)	240, 755, 1180, 2039
BmiI	GGNNCC	6 cut(s)	253, 346, 1366, 1776, 1927, 1947
BmrFI	CCNGG	6 cut(s)	176, 342, 945, 1101, 1362, 1905
BmrI	ACTGGG	1 cut(s)	247
BmsI	GCATC	6 cut(s)	688, 865, 1111, 1336, 1429, 1549
BmuI	ACTGGG	1 cut(s)	247
BpiI	GAAGAC	1 cut(s)	207
BpmI	CTGGAG	1 cut(s)	967
Bpu10I	CCTNAGC	1 cut(s)	398
Bpu1102I	GCTNAGC	2 cut(s)	500, 1245
BpuMI	CCSGG	2 cut(s)	342, 945
BsaAI	YACGTR	1 cut(s)	641
BsaHI	GRCGYC	2 cut(s)	252, 578
BsaI	GGTCTC	1 cut(s)	184
BsaJI	CCNNGG	4 cut(s)	174, 247, 1274, 1360
BsaWI	WCCGGW	1 cut(s)	1659
Bsc4I	CCNNNNNNNGG	6 cut(s)	175, 238, 950, 1062, 1639, 1935
Bse1I	ACTGG	3 cut(s)	242, 1794, 1873
Bse21I	CCTNAGG	1 cut(s)	1719
Bse3DI	GCAATG	2 cut(s)	511, 814
BseAI	TCCGGA	1 cut(s)	1659
BseBI	CCWGG	4 cut(s)	176, 1101, 1362, 1905
BseDI	CCNNGG	4 cut(s)	174, 247, 1274, 1360
BseGI	GGATG	5 cut(s)	703, 1081, 1351, 1444, 1485
BseLI	CCNNNNNNNGG	6 cut(s)	175, 238, 950, 1062, 1639, 1935
BseMI	GCAATG	2 cut(s)	511, 814
BseMII	CTCAG	6 cut(s)	389, 486, 491, 1084, 1710, 1993
BseNI	ACTGG	3 cut(s)	242, 1794, 1873
BseRI	GAGGAG	4 cut(s)	120, 392, 1222, 1736
BseSI	GKGCMC	1 cut(s)	473
BsgI	GTGCAG	2 cut(s)	813, 958
Bsh1236I	CGCG	1 cut(s)	760
BshFI	GGCC	3 cut(s)	242, 607, 2040
BshNI	GGYRCC	4 cut(s)	251, 1774, 1925, 1945
BsiHKAI	GWGCWC	1 cut(s)	1659
BsiHKCI	CYCGRG	1 cut(s)	609
BsiSI	CCGG	4 cut(s)	111, 342, 944, 1660
BslFI	GGGAC	3 cut(s)	814, 1292, 1987
BslI	CCNNNNNNNGG	6 cut(s)	175, 238, 950, 1062, 1639, 1935
BsmAI	GTCTC	2 cut(s)	184, 1905
BsmFI	GGGAC	3 cut(s)	814, 1292, 1987
BsmI	GAATGC	2 cut(s)	1269, 1960
BsnI	GGCC	3 cut(s)	242, 607, 2040
Bso31I	GGTCTC	1 cut(s)	184
BsoBI	CYCGRG	1 cut(s)	609
Bsp1286I	GDGCHC	2 cut(s)	473, 1659
Bsp13I	TCCGGA	1 cut(s)	1659
Bsp1407I	TGTACA	1 cut(s)	2008
Bsp143I	GATC	3 cut(s)	595, 1221, 1311
Bsp1720I	GCTNAGC	2 cut(s)	500, 1245
Bsp19I	CCATGG	1 cut(s)	1274
BspACI	CCGC	5 cut(s)	72, 134, 255, 758, 1388
BspANI	GGCC	3 cut(s)	242, 607, 2040
BspCNI	CTCAG	6 cut(s)	390, 487, 492, 1083, 1711, 1992
BspEI	TCCGGA	1 cut(s)	1659
BspFNI	CGCG	1 cut(s)	760
BspLI	GGNNCC	6 cut(s)	253, 346, 1366, 1776, 1927, 1947
BspMAI	CTGCAG	1 cut(s)	209
BspMI	ACCTGC	2 cut(s)	1313, 1346
BspPI	GGATC	1 cut(s)	590
BspT107I	GGYRCC	4 cut(s)	251, 1774, 1925, 1945
BspTNI	GGTCTC	1 cut(s)	184
BsrDI	GCAATG	2 cut(s)	511, 814
BsrGI	TGTACA	1 cut(s)	2008
BsrI	ACTGG	3 cut(s)	242, 1794, 1873
BssECI	CCNNGG	4 cut(s)	174, 247, 1274, 1360
BssMI	GATC	3 cut(s)	595, 1221, 1311
BssNAI	GTATAC	1 cut(s)	1286
BssNI	GRCGYC	2 cut(s)	252, 578
BssSI	CACGAG	1 cut(s)	1650
BssT1I	CCWWGG	1 cut(s)	1274
Bst1107I	GTATAC	1 cut(s)	1286
Bst2BI	CACGAG	1 cut(s)	1650
Bst2UI	CCWGG	4 cut(s)	176, 1101, 1362, 1905
Bst4CI	ACNGT	9 cut(s)	708, 892, 1283, 1397, 1456, 1505, 1515, 1844, 1986
Bst6I	CTCTTC	3 cut(s)	678, 714, 2073
BstACI	GRCGYC	2 cut(s)	252, 578
BstAPI	GCANNNNNTGC	1 cut(s)	827
BstAUI	TGTACA	1 cut(s)	2008
BstBAI	YACGTR	1 cut(s)	641
BstC8I	GCNNGC	7 cut(s)	82, 86, 268, 777, 783, 1447, 1795
BstDEI	CTNAG	9 cut(s)	398, 495, 500, 791, 1070, 1136, 1245, 1719, 1979
BstDSI	CCRYGG	2 cut(s)	247, 1274
BstF5I	GGATG	5 cut(s)	703, 1081, 1351, 1444, 1485
BstFNI	CGCG	1 cut(s)	760
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	2 cut(s)	254, 781
BstKTI	GATC	3 cut(s)	598, 1224, 1314
BstMAI	GTCTC	2 cut(s)	184, 1905
BstMBI	GATC	3 cut(s)	595, 1221, 1311
BstMWI	GCNNNNNNNGC	5 cut(s)	263, 400, 827, 1568, 1810
BstNI	CCWGG	4 cut(s)	176, 1101, 1362, 1905
BstNSI	RCATGY	3 cut(s)	779, 971, 1817
BstSCI	CCNGG	6 cut(s)	174, 340, 943, 1099, 1360, 1903
BstSFI	CTRYAG	2 cut(s)	205, 704
BstSLI	GKGCMC	1 cut(s)	473
BstUI	CGCG	1 cut(s)	760
BstV2I	GAAGAC	1 cut(s)	207
BstX2I	RGATCY	1 cut(s)	1221
BstXI	CCANNNNNNTGG	2 cut(s)	1361, 1872
BstYI	RGATCY	1 cut(s)	1221
BstZ17I	GTATAC	1 cut(s)	1286
Bsu36I	CCTNAGG	1 cut(s)	1719
BsuRI	GGCC	3 cut(s)	242, 607, 2040
BtgI	CCRYGG	2 cut(s)	247, 1274
BtgZI	GCGATG	1 cut(s)	88
BtsCI	GGATG	5 cut(s)	703, 1081, 1351, 1444, 1485
BtsI	GCAGTG	3 cut(s)	1354, 1677, 1739
BtsIMutI	CAGTG	6 cut(s)	473, 713, 1354, 1677, 1739, 1787
BveI	ACCTGC	2 cut(s)	1313, 1346
Cac8I	GCNNGC	7 cut(s)	82, 86, 268, 777, 783, 1447, 1795
CaiI	CAGNNNCTG	1 cut(s)	1022
CfoI	GCGC	2 cut(s)	254, 781
Cfr13I	GGNCC	4 cut(s)	240, 755, 1180, 2039
CseI	GACGC	2 cut(s)	567, 998
Csp6I	GTAC	4 cut(s)	1097, 1295, 1926, 2009
CviQI	GTAC	4 cut(s)	1097, 1295, 1926, 2009
DdeI	CTNAG	9 cut(s)	398, 495, 500, 791, 1070, 1136, 1245, 1719, 1979
DinI	GGCGCC	1 cut(s)	253
DpnI	GATC	3 cut(s)	597, 1223, 1313
DpnII	GATC	3 cut(s)	595, 1221, 1311
DraI	TTTAAA	2 cut(s)	1129, 1701
Eam1104I	CTCTTC	3 cut(s)	678, 714, 2073
EarI	CTCTTC	3 cut(s)	678, 714, 2073
Eco130I	CCWWGG	1 cut(s)	1274
Eco147I	AGGCCT	1 cut(s)	607
Eco31I	GGTCTC	1 cut(s)	184
Eco47I	GGWCC	2 cut(s)	755, 1180
Eco57I	CTGAAG	1 cut(s)	1829
Eco81I	CCTNAGG	1 cut(s)	1719
Eco88I	CYCGRG	1 cut(s)	609
EcoRI	GAATTC	2 cut(s)	313, 2053
EcoRII	CCWGG	4 cut(s)	174, 1099, 1360, 1903
EcoT14I	CCWWGG	1 cut(s)	1274
EcoT22I	ATGCAT	1 cut(s)	880
EgeI	GGCGCC	1 cut(s)	253
EheI	GGCGCC	1 cut(s)	253
ErhI	CCWWGG	1 cut(s)	1274
FaqI	GGGAC	3 cut(s)	814, 1292, 1987
FauNDI	CATATG	1 cut(s)	1176
FblI	GTMKAC	1 cut(s)	1285
FokI	GGATG	5 cut(s)	710, 1088, 1358, 1451, 1472
FspBI	CTAG	4 cut(s)	327, 563, 804, 960
GlaI	GCGC	2 cut(s)	253, 780
GsuI	CTGGAG	1 cut(s)	967
HaeII	RGCGCY	1 cut(s)	255
HaeIII	GGCC	3 cut(s)	242, 607, 2040
HapII	CCGG	4 cut(s)	111, 342, 944, 1660
HgaI	GACGC	2 cut(s)	567, 998
HhaI	GCGC	2 cut(s)	254, 781
Hin1I	GRCGYC	2 cut(s)	252, 578
Hin6I	GCGC	2 cut(s)	252, 779
HinP1I	GCGC	2 cut(s)	252, 779
HincII	GTYRAC	1 cut(s)	439
HindII	GTYRAC	1 cut(s)	439
HindIII	AAGCTT	5 cut(s)	1247, 1262, 1795, 1966, 1994
HinfI	GANTC	6 cut(s)	18, 155, 215, 323, 1834, 2045
HpaII	CCGG	4 cut(s)	111, 342, 944, 1660
HphI	GGTGA	5 cut(s)	136, 908, 1054, 1327, 1430
Hpy166II	GTNNAC	7 cut(s)	439, 1097, 1255, 1286, 1740, 1785, 2029
Hpy188I	TCNGA	6 cut(s)	63, 312, 496, 600, 1602, 1982
Hpy188III	TCNNGA	9 cut(s)	15, 366, 539, 563, 582, 869, 984, 1660, 1718
Hpy8I	GTNNAC	7 cut(s)	439, 1097, 1255, 1286, 1740, 1785, 2029
Hpy99I	CGWCG	4 cut(s)	38, 41, 44, 47
HpyAV	CCTTC	5 cut(s)	100, 416, 422, 878, 1905
HpyCH4III	ACNGT	9 cut(s)	708, 892, 1283, 1397, 1456, 1505, 1515, 1844, 1986
HpyCH4IV	ACGT	3 cut(s)	123, 640, 1033
HpyF10VI	GCNNNNNNNGC	5 cut(s)	263, 400, 827, 1568, 1810
HpyF3I	CTNAG	9 cut(s)	398, 495, 500, 791, 1070, 1136, 1245, 1719, 1979
HpySE526I	ACGT	3 cut(s)	123, 640, 1033
Hsp92I	GRCGYC	2 cut(s)	252, 578
HspAI	GCGC	2 cut(s)	252, 779
KasI	GGCGCC	1 cut(s)	251
Kpn2I	TCCGGA	1 cut(s)	1659
KpnI	GGTACC	1 cut(s)	1929
Kzo9I	GATC	3 cut(s)	595, 1221, 1311
LmnI	GCTCC	4 cut(s)	344, 525, 1235, 1662
LweI	GCATC	6 cut(s)	688, 865, 1111, 1336, 1429, 1549
MaeI	CTAG	4 cut(s)	327, 563, 804, 960
MaeII	ACGT	3 cut(s)	123, 640, 1033
MaeIII	GTNAC	4 cut(s)	1333, 1418, 1505, 1675
MalI	GATC	3 cut(s)	597, 1223, 1313
MboI	GATC	3 cut(s)	595, 1221, 1311
MfeI	CAATTG	1 cut(s)	1617
MflI	RGATCY	1 cut(s)	1221
MhlI	GDGCHC	2 cut(s)	473, 1659
Mly113I	GGCGCC	1 cut(s)	252
MlyI	GAGTC	3 cut(s)	149, 332, 1843
MmeI	TCCRAC	2 cut(s)	1853, 1889
Mph1103I	ATGCAT	1 cut(s)	880
MroI	TCCGGA	1 cut(s)	1659
MroXI	GAANNNNTTC	2 cut(s)	123, 1468
MseI	TTAA	7 cut(s)	336, 732, 1128, 1196, 1700, 1745, 2080
MslI	CAYNNNNRTG	3 cut(s)	528, 1032, 1416
MspA1I	CMGCKG	2 cut(s)	257, 1019
MspI	CCGG	4 cut(s)	111, 342, 944, 1660
MspR9I	CCNGG	6 cut(s)	176, 342, 945, 1101, 1362, 1905
MunI	CAATTG	1 cut(s)	1617
Mva1269I	GAATGC	2 cut(s)	1269, 1960
MvaI	CCWGG	4 cut(s)	176, 1101, 1362, 1905
MvnI	CGCG	1 cut(s)	760
MwoI	GCNNNNNNNGC	5 cut(s)	263, 400, 827, 1568, 1810
NarI	GGCGCC	1 cut(s)	252
NciI	CCSGG	2 cut(s)	342, 945
NcoI	CCATGG	1 cut(s)	1274
NdeI	CATATG	1 cut(s)	1176
NdeII	GATC	3 cut(s)	595, 1221, 1311
NlaIV	GGNNCC	6 cut(s)	253, 346, 1366, 1776, 1927, 1947
NmuCI	GTSAC	3 cut(s)	1333, 1418, 1675
NsiI	ATGCAT	1 cut(s)	880
NspI	RCATGY	3 cut(s)	779, 971, 1817
PaeI	GCATGC	1 cut(s)	779
PaeR7I	CTCGAG	1 cut(s)	609
PaqCI	CACCTGC	1 cut(s)	1346
PceI	AGGCCT	1 cut(s)	607
PcsI	WCGNNNNNNNCGW	3 cut(s)	39, 42, 867
PctI	GAATGC	2 cut(s)	1269, 1960
PdmI	GAANNNNTTC	2 cut(s)	123, 1468
PfeI	GAWTC	3 cut(s)	18, 215, 2045
PfoI	TCCNGGA	2 cut(s)	943, 1903
PleI	GAGTC	3 cut(s)	149, 331, 1842
PluTI	GGCGCC	1 cut(s)	255
PpsI	GAGTC	3 cut(s)	149, 331, 1842
Ppu21I	YACGTR	1 cut(s)	641
PsiI	TTATAA	2 cut(s)	677, 1934
Psp1406I	AACGTT	1 cut(s)	123
Psp6I	CCWGG	4 cut(s)	174, 1099, 1360, 1903
PspGI	CCWGG	4 cut(s)	174, 1099, 1360, 1903
PspN4I	GGNNCC	6 cut(s)	253, 346, 1366, 1776, 1927, 1947
PspPI	GGNCC	4 cut(s)	240, 755, 1180, 2039
PspXI	VCTCGAGB	1 cut(s)	609
PstI	CTGCAG	1 cut(s)	209
PstNI	CAGNNNCTG	1 cut(s)	1022
PsuI	RGATCY	1 cut(s)	1221
PvuII	CAGCTG	1 cut(s)	1019
RsaI	GTAC	4 cut(s)	1098, 1296, 1927, 2010
RsaNI	GTAC	4 cut(s)	1097, 1295, 1926, 2009
RseI	CAYNNNNRTG	3 cut(s)	528, 1032, 1416
SaqAI	TTAA	7 cut(s)	336, 732, 1128, 1196, 1700, 1745, 2080
Sau3AI	GATC	3 cut(s)	595, 1221, 1311
Sau96I	GGNCC	4 cut(s)	240, 755, 1180, 2039
SchI	GAGTC	3 cut(s)	149, 332, 1843
ScrFI	CCNGG	6 cut(s)	176, 342, 945, 1101, 1362, 1905
SduI	GDGCHC	2 cut(s)	473, 1659
SfaNI	GCATC	6 cut(s)	688, 865, 1111, 1336, 1429, 1549
SfcI	CTRYAG	2 cut(s)	205, 704
SfoI	GGCGCC	1 cut(s)	253
Sfr274I	CTCGAG	1 cut(s)	609
SinI	GGWCC	2 cut(s)	755, 1180
SlaI	CTCGAG	1 cut(s)	609
SmiMI	CAYNNNNRTG	3 cut(s)	528, 1032, 1416
SmlI	CTYRAG	1 cut(s)	609
SmoI	CTYRAG	1 cut(s)	609
SphI	GCATGC	1 cut(s)	779
SseBI	AGGCCT	1 cut(s)	607
SsiI	CCGC	5 cut(s)	72, 134, 255, 758, 1388
SspDI	GGCGCC	1 cut(s)	251
SspI	AATATT	1 cut(s)	1318
SspMI	CTAG	4 cut(s)	327, 563, 804, 960
StuI	AGGCCT	1 cut(s)	607
StyD4I	CCNGG	6 cut(s)	174, 340, 943, 1099, 1360, 1903
StyI	CCWWGG	1 cut(s)	1274
TaaI	ACNGT	9 cut(s)	708, 892, 1283, 1397, 1456, 1505, 1515, 1844, 1986
TaiI	ACGT	3 cut(s)	126, 643, 1036
TaqI	TCGA	9 cut(s)	198, 234, 317, 556, 610, 861, 870, 1114, 1837
TatI	WGTACW	1 cut(s)	2008
TauI	GCSGC	1 cut(s)	257
TfiI	GAWTC	3 cut(s)	18, 215, 2045
Tru1I	TTAA	7 cut(s)	336, 732, 1128, 1196, 1700, 1745, 2080
Tru9I	TTAA	7 cut(s)	336, 732, 1128, 1196, 1700, 1745, 2080
TscAI	CASTG	6 cut(s)	473, 713, 1361, 1684, 1739, 1794
TseFI	GTSAC	3 cut(s)	1333, 1418, 1675
Tsp45I	GTSAC	3 cut(s)	1333, 1418, 1675
TspDTI	ATGAA	7 cut(s)	459, 522, 1163, 1274, 1466, 1757, 1770
TspGWI	ACGGA	1 cut(s)	947
TspRI	CASTG	6 cut(s)	473, 713, 1361, 1684, 1739, 1794
VpaK11BI	GGWCC	2 cut(s)	755, 1180
XapI	RAATTY	3 cut(s)	313, 1764, 2053
XbaI	TCTAGA	1 cut(s)	562
XceI	RCATGY	3 cut(s)	779, 971, 1817
XhoI	CTCGAG	1 cut(s)	609
XmiI	GTMKAC	1 cut(s)	1285
XmnI	GAANNNNTTC	2 cut(s)	123, 1468
XspI	CTAG	4 cut(s)	327, 563, 804, 960
Zsp2I	ATGCAT	1 cut(s)	880

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.