Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0003165

Physical Location & Seq

Genomic Coordinates Reverse (-)

62946756 .. 62950590

Gene Structure 3835 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G038840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGGCTTCAAAATCCAGATTCAACCTCATAGACGACGACGACGACGACTTCCAAACCCCTCTGACCCAAACCGCCACAGCTCGCACGCCCTTCAAAAAGCCCATCGCCTCCGGCAAAGAAAACGTTCCTCCTCCGCTTTGCTTCACCCCGAAAGACTCCATTTTGAACCAAACCCAGGTCTCCAAATCCACGCCAATCGAAGATTGCAGCTTGGATTCGCTGCCTGAAAGCCTCGACTGGGCCACCCACGGCGCCGCTGCTTCTGCGTGCGTGGGTGAGGAAAATGGGGGGTATTTTCGGAATTCGATAGAGTCTAGGTTGATTAAGCCCGGAGCCGATTGGGGTTTTGGTTCTGGAAATGGCGAGGAGATTGATGTGCTGCTGAGGCCGAATGGGATTGAGGAAGAAGGGGAAGGAATTGTTGAGGATGAAAATGGGGGTTTGGTGGTTCAGTGCCCTCTATGTGAAATTGACATTTCTGAGCTGAGCAATGAAGAAAGACAGCTCCACACTAATGATTGTCTTGACAAACAACAAGTTCGACCTCTAGACGAACAAGAGGGGTCTGGAATTGCTGATGATCCGATGAGGCCTCGAGTTGTTGAGTGGCTACGTGGTCTTGGTTTAGACAAGTATGAGGAAGTTTTTTTAAGGGAAGAGATTGATTGGGATGCTCTACAGTGGCTCACAGAAGAGGATTTGTTTAACATTGGCATTACCGCACTTGGTCCGCGTAAGAAGATTGTGCATGCACTCGCTCAACTTAGACAAGGGACTAGCAATGGAATTGAAGCACAAACTGCACAACCAAGAAAAAGGAGTGCCAATGGGGTCGAGGTTCTCGATGATGCATTGGAAGGAACAGCTGGTGATAGTAGTAAATCAGCTTCAAACAAGTTGATTACGGATTACTTTCCGGATTTGGTGGTGCTAGGAAGCGTGGTAGAAAAGCGTCAGTCAGGTGCTGGTCATAAACGTGTTGTCGTGAAAAATCATGCCACAAATAGGAAACTAAGGGATGTTCCCTCATGGTGTTGTGTACCAGGAACACCATTTCGAGTAGATGCTTTTAAATATCTTAGACGGGATTGCTCTCATTGGTTTCTCACTCACTTTCATATGGACCATTATCAAGGTTTAACAAAGTCCTTTTGTCATGGAAAGATCTATTGCTCCTCCATTACAGCTAAGCTTGTAAACATGAAGCTTGGCATTCCATGGGACAGTATACAAGTCGTACCCCTCAACCGAAAGATCAATATTGCAGGTATTGATGTCACCTGCTTGGATGCAAACCACTGCCCTGGTTCCATAATTATACTTTTTGAACCGCCTAACAGTAAGGCTGTTCTACATACAGGGGACTTTCGCTTTAGTGAGGACGCAGCAAGCATGACTGTTTTGCGAACATCTTCTATTCATACGCTCATCCTTGATACCACTTATTGTAACCCACAGTATGACTTTCCAAAGCAGGAGGCTGTAATTCAGTTTGTCGTTGATGCAATTCAAGCTGAAACTTTCAATCCTAAAACTCTATTTCTGATTGGCAGCTACACAATTGGAAAGGAACGCCTTTACTTGGAGGTTGCTCGTGTGCTCCGGAAAAAGATTTATGTCACTGCTGGAAAGCTGCATATTTTAAAATGTTTGGATTTTCCTGAGGAGGATATGCAGTGGTTTACATTAAACGAACATGAAAGCCAAATTCATGTGGTGCCGATGTGGACACTGGCAAGCTTCAAGCGACTGAAGCATGTATCAAATCAATATGCGAGTCGATACAGTCTTATTGTTGCTTTCTCTCCAACTGGTTGGACTTTTGGTAAAGGAAAGAAGAAGTCTCCTGGAAGAAGGTGGCAGCAGGGTACCATTATAAGGTATGAGGTGCCATATAGTGAGCATTCAAGCTTTACAGAACTCAGACAGTTTGTGAAGCTGGTGTCCCCTGTACAAATAATACCAAGTGTGAACAACCATGGCCCAGATTCAGCGAATTCCATGATTTCTCTTCTCTCTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000715 GO:0000723 GO:0000726 GO:0000781 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0004518 GO:0004527 GO:0004529 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0008409 GO:0009987 GO:0016043 GO:0016233 GO:0016787 GO:0016788 GO:0016796 GO:0016895 GO:0031848 GO:0031974 GO:0031981 GO:0032200 GO:0033554 GO:0034641 GO:0035312 GO:0036297 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043247 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098687 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DRMBL Lactamase_B_2 SAM_1

Protein Analysis

674

Amino Acids

75.34

Weight (kDa)

5.8

Isoelectric Point (pI)

40.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAM_2	PF07647	198 - 256	2.3e-11	SAM domain (Sterile alpha motif)
SAM_1	PF00536	199 - 256	7e-17	SAM domain (Sterile alpha motif)
DRMBL	PF07522	557 - 660	1.6e-26	DNA repair metallo-beta-lactamase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45700 AT2G45700 AT3G26680 AT3G26680 AT3G26680 AT3G26680
fragaria_vesca	FvH4_2g36980 FvH4_2g36980 FvH4_2g36980 FvH4_2g36980
prunus_persica	Prupe.1G401600_v2.0.a1 Prupe.1G401600_v2.0.a1 Prupe.1G401600_v2.0.a1
pyrus_communis	pycom15g04570
rosa_chinensis	RchiOBHm_Chr6g0304781
rosa_laevigata	RLG00000009558 RLG00000010950 RLG00000018503 RLG00000033826
rosa_multiflora	Rmu_sc0003120.1_g000004 Rmu_sc0007437.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010130 Rroxscaffold_5G00359510 Rroxscaffold_7G00163500
rosa_rugosa	Rorug06G0334500
rosa_samantha	Rh1CG059900 Rh1DG063900 Rh4DG405200 Rh6AG132400 Rh6AG446400 Rh6BG129800 Rh6BG455200 Rh6CG128100 Rh6CG459900 Rh6DG115200 Rh6DG446700
rosa_wichuraiana	Rw6G038840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1877
AarI	CACCTGC	1 cut(s)	1289
Acc36I	ACCTGC	2 cut(s)	1256, 1289
Acc65I	GGTACC	1 cut(s)	1868
AccB1I	GGYRCC	4 cut(s)	251, 1717, 1868, 1888
AccI	GTMKAC	1 cut(s)	1228
AccII	CGCG	1 cut(s)	733
AccIII	TCCGGA	2 cut(s)	916, 1602
AciI	CCGC	6 cut(s)	72, 134, 255, 720, 731, 1331
AclI	AACGTT	1 cut(s)	123
AclWI	GGATC	1 cut(s)	575
AcsI	RAATTY	3 cut(s)	301, 1707, 1996
AcuI	CTGAAG	1 cut(s)	1772
AcyI	GRCGYC	1 cut(s)	252
AfaI	GTAC	4 cut(s)	1041, 1239, 1870, 1953
AfiI	CCNNNNNNNGG	5 cut(s)	175, 238, 1005, 1582, 1878
AflIII	ACRYGT	1 cut(s)	976
AjnI	CCWGG	4 cut(s)	174, 1042, 1303, 1846
Alw21I	GWGCWC	1 cut(s)	1602
Alw26I	GTCTC	2 cut(s)	184, 1848
AlwI	GGATC	1 cut(s)	575
AlwNI	CAGNNNCTG	1 cut(s)	965
Ama87I	CYCGRG	1 cut(s)	594
Aor13HI	TCCGGA	2 cut(s)	916, 1602
AoxI	GGCC	4 cut(s)	240, 386, 590, 1981
ApeKI	GCWGC	8 cut(s)	207, 220, 257, 379, 1385, 1551, 1633, 1861
ApoI	RAATTY	3 cut(s)	301, 1707, 1996
Asp700I	GAANNNNTTC	2 cut(s)	123, 1411
Asp718I	GGTACC	1 cut(s)	1868
AspLEI	GCGC	1 cut(s)	254
AspS9I	GGNCC	4 cut(s)	240, 728, 1123, 1982
AsuC2I	CCSGG	1 cut(s)	330
AsuHPI	GGTGA	4 cut(s)	136, 287, 881, 1270
AvaI	CYCGRG	1 cut(s)	594
AvaII	GGWCC	2 cut(s)	728, 1123
AxyI	CCTNAGG	1 cut(s)	1662
BaeGI	GKGCMC	1 cut(s)	458
BanI	GGYRCC	4 cut(s)	251, 1717, 1868, 1888
BarI	GAAGNNNNNNTAC	2 cut(s)	871, 903
BauI	CACGAG	1 cut(s)	1593
Bbv12I	GWGCWC	1 cut(s)	1602
BbvCI	CCTCAGC	1 cut(s)	383
BbvI	GCAGC	8 cut(s)	207, 219, 244, 366, 1397, 1563, 1620, 1873
BccI	CCATC	1 cut(s)	110
BceAI	ACGGC	1 cut(s)	265
BciT130I	CCWGG	4 cut(s)	176, 1044, 1305, 1848
BcnI	CCSGG	1 cut(s)	330
BcoDI	GTCTC	2 cut(s)	184, 1848
BfaI	CTAG	4 cut(s)	315, 548, 777, 932
BfmI	CTRYAG	1 cut(s)	677
BfoI	RGCGCY	1 cut(s)	255
BfuAI	ACCTGC	2 cut(s)	1256, 1289
BglII	AGATCT	1 cut(s)	1164
BisI	GCNGC	9 cut(s)	208, 221, 255, 258, 380, 1386, 1552, 1634, 1862
BlpI	GCTNAGC	2 cut(s)	485, 1188
BlsI	GCNGC	9 cut(s)	209, 222, 256, 259, 381, 1387, 1553, 1635, 1863
Bme1390I	CCNGG	5 cut(s)	176, 330, 1044, 1305, 1848
Bme18I	GGWCC	2 cut(s)	728, 1123
BmeT110I	CYCGRG	1 cut(s)	594
BmgT120I	GGNCC	4 cut(s)	240, 728, 1123, 1982
BmiI	GGNNCC	6 cut(s)	253, 334, 1309, 1719, 1870, 1890
BmrFI	CCNGG	5 cut(s)	176, 330, 1044, 1305, 1848
BmrI	ACTGGG	1 cut(s)	247
BmsI	GCATC	5 cut(s)	661, 838, 1054, 1279, 1492
BmuI	ACTGGG	1 cut(s)	247
Bpu10I	CCTNAGC	1 cut(s)	383
Bpu1102I	GCTNAGC	2 cut(s)	485, 1188
BpuMI	CCSGG	1 cut(s)	330
BsaAI	YACGTR	1 cut(s)	614
BsaHI	GRCGYC	1 cut(s)	252
BsaI	GGTCTC	1 cut(s)	184
BsaJI	CCNNGG	5 cut(s)	174, 247, 1217, 1303, 1978
BsaWI	WCCGGW	2 cut(s)	916, 1602
Bsc4I	CCNNNNNNNGG	5 cut(s)	175, 238, 1005, 1582, 1878
Bse1I	ACTGG	3 cut(s)	242, 1737, 1816
Bse21I	CCTNAGG	1 cut(s)	1662
Bse3DI	GCAATG	2 cut(s)	496, 787
BseAI	TCCGGA	2 cut(s)	916, 1602
BseBI	CCWGG	4 cut(s)	176, 1044, 1305, 1848
BseDI	CCNNGG	5 cut(s)	174, 247, 1217, 1303, 1978
BseGI	GGATG	5 cut(s)	433, 676, 1024, 1294, 1428
BseLI	CCNNNNNNNGG	5 cut(s)	175, 238, 1005, 1582, 1878
BseMI	GCAATG	2 cut(s)	496, 787
BseMII	CTCAG	5 cut(s)	374, 471, 476, 1653, 1936
BseNI	ACTGG	3 cut(s)	242, 1737, 1816
BseRI	GAGGAG	4 cut(s)	120, 380, 1165, 1679
BseSI	GKGCMC	1 cut(s)	458
BseXI	GCAGC	8 cut(s)	207, 219, 244, 366, 1397, 1563, 1620, 1873
BsgI	GTGCAG	1 cut(s)	786
Bsh1236I	CGCG	1 cut(s)	733
BshFI	GGCC	4 cut(s)	242, 388, 592, 1983
BshNI	GGYRCC	4 cut(s)	251, 1717, 1868, 1888
BsiHKAI	GWGCWC	1 cut(s)	1602
BsiHKCI	CYCGRG	1 cut(s)	594
BsiSI	CCGG	4 cut(s)	111, 330, 917, 1603
BslFI	GGGAC	4 cut(s)	787, 1235, 1376, 1930
BslI	CCNNNNNNNGG	5 cut(s)	175, 238, 1005, 1582, 1878
BsmAI	GTCTC	2 cut(s)	184, 1848
BsmFI	GGGAC	4 cut(s)	787, 1235, 1376, 1930
BsmI	GAATGC	2 cut(s)	1212, 1903
BsnI	GGCC	4 cut(s)	242, 388, 592, 1983
Bso31I	GGTCTC	1 cut(s)	184
BsoBI	CYCGRG	1 cut(s)	594
Bsp1286I	GDGCHC	2 cut(s)	458, 1602
Bsp13I	TCCGGA	2 cut(s)	916, 1602
Bsp1407I	TGTACA	1 cut(s)	1951
Bsp143I	GATC	3 cut(s)	580, 1164, 1254
Bsp1720I	GCTNAGC	2 cut(s)	485, 1188
Bsp19I	CCATGG	2 cut(s)	1217, 1978
BspACI	CCGC	6 cut(s)	72, 134, 255, 720, 731, 1331
BspANI	GGCC	4 cut(s)	242, 388, 592, 1983
BspCNI	CTCAG	5 cut(s)	375, 472, 477, 1654, 1935
BspEI	TCCGGA	2 cut(s)	916, 1602
BspFNI	CGCG	1 cut(s)	733
BspLI	GGNNCC	6 cut(s)	253, 334, 1309, 1719, 1870, 1890
BspMI	ACCTGC	2 cut(s)	1256, 1289
BspPI	GGATC	1 cut(s)	575
BspT107I	GGYRCC	4 cut(s)	251, 1717, 1868, 1888
BspTNI	GGTCTC	1 cut(s)	184
BsrDI	GCAATG	2 cut(s)	496, 787
BsrGI	TGTACA	1 cut(s)	1951
BsrI	ACTGG	3 cut(s)	242, 1737, 1816
BssECI	CCNNGG	5 cut(s)	174, 247, 1217, 1303, 1978
BssMI	GATC	3 cut(s)	580, 1164, 1254
BssNAI	GTATAC	1 cut(s)	1229
BssNI	GRCGYC	1 cut(s)	252
BssSI	CACGAG	1 cut(s)	1593
BssT1I	CCWWGG	2 cut(s)	1217, 1978
Bst1107I	GTATAC	1 cut(s)	1229
Bst2BI	CACGAG	1 cut(s)	1593
Bst2UI	CCWGG	4 cut(s)	176, 1044, 1305, 1848
Bst4CI	ACNGT	7 cut(s)	681, 1226, 1340, 1399, 1458, 1787, 1929
Bst6I	CTCTTC	3 cut(s)	651, 687, 2016
BstACI	GRCGYC	1 cut(s)	252
BstAPI	GCANNNNNTGC	1 cut(s)	800
BstAUI	TGTACA	1 cut(s)	1951
BstBAI	YACGTR	1 cut(s)	614
BstC8I	GCNNGC	6 cut(s)	82, 86, 268, 750, 1390, 1738
BstDEI	CTNAG	9 cut(s)	383, 480, 485, 764, 1013, 1079, 1188, 1662, 1922
BstDSI	CCRYGG	3 cut(s)	247, 1217, 1978
BstF5I	GGATG	5 cut(s)	433, 676, 1024, 1294, 1428
BstFNI	CGCG	1 cut(s)	733
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	1 cut(s)	254
BstKTI	GATC	3 cut(s)	583, 1167, 1257
BstMAI	GTCTC	2 cut(s)	184, 1848
BstMBI	GATC	3 cut(s)	580, 1164, 1254
BstMWI	GCNNNNNNNGC	5 cut(s)	263, 385, 800, 1511, 1753
BstNI	CCWGG	4 cut(s)	176, 1044, 1305, 1848
BstNSI	RCATGY	2 cut(s)	752, 1760
BstSCI	CCNGG	5 cut(s)	174, 328, 1042, 1303, 1846
BstSFI	CTRYAG	1 cut(s)	677
BstSLI	GKGCMC	1 cut(s)	458
BstUI	CGCG	1 cut(s)	733
BstV1I	GCAGC	8 cut(s)	207, 219, 244, 366, 1397, 1563, 1620, 1873
BstX2I	RGATCY	1 cut(s)	1164
BstXI	CCANNNNNNTGG	2 cut(s)	1304, 1815
BstYI	RGATCY	1 cut(s)	1164
BstZ17I	GTATAC	1 cut(s)	1229
Bsu36I	CCTNAGG	1 cut(s)	1662
BsuRI	GGCC	4 cut(s)	242, 388, 592, 1983
BtgI	CCRYGG	3 cut(s)	247, 1217, 1978
BtgZI	GCGATG	1 cut(s)	88
BtsCI	GGATG	5 cut(s)	433, 676, 1024, 1294, 1428
BtsI	GCAGTG	3 cut(s)	1297, 1620, 1682
BtsIMutI	CAGTG	6 cut(s)	458, 686, 1297, 1620, 1682, 1730
BveI	ACCTGC	2 cut(s)	1256, 1289
Cac8I	GCNNGC	6 cut(s)	82, 86, 268, 750, 1390, 1738
CaiI	CAGNNNCTG	1 cut(s)	965
CfoI	GCGC	1 cut(s)	254
Cfr13I	GGNCC	4 cut(s)	240, 728, 1123, 1982
CseI	GACGC	2 cut(s)	941, 1391
Csp6I	GTAC	4 cut(s)	1040, 1238, 1869, 1952
CviQI	GTAC	4 cut(s)	1040, 1238, 1869, 1952
DdeI	CTNAG	9 cut(s)	383, 480, 485, 764, 1013, 1079, 1188, 1662, 1922
DinI	GGCGCC	1 cut(s)	253
DpnI	GATC	3 cut(s)	582, 1166, 1256
DpnII	GATC	3 cut(s)	580, 1164, 1254
DraI	TTTAAA	2 cut(s)	1072, 1644
Eam1104I	CTCTTC	3 cut(s)	651, 687, 2016
EarI	CTCTTC	3 cut(s)	651, 687, 2016
Eco130I	CCWWGG	2 cut(s)	1217, 1978
Eco147I	AGGCCT	1 cut(s)	592
Eco31I	GGTCTC	1 cut(s)	184
Eco47I	GGWCC	2 cut(s)	728, 1123
Eco57I	CTGAAG	1 cut(s)	1772
Eco81I	CCTNAGG	1 cut(s)	1662
Eco88I	CYCGRG	1 cut(s)	594
EcoRI	GAATTC	2 cut(s)	301, 1996
EcoRII	CCWGG	4 cut(s)	174, 1042, 1303, 1846
EcoT14I	CCWWGG	2 cut(s)	1217, 1978
EcoT22I	ATGCAT	1 cut(s)	853
EgeI	GGCGCC	1 cut(s)	253
EheI	GGCGCC	1 cut(s)	253
ErhI	CCWWGG	2 cut(s)	1217, 1978
FaqI	GGGAC	4 cut(s)	787, 1235, 1376, 1930
FauNDI	CATATG	1 cut(s)	1119
FblI	GTMKAC	1 cut(s)	1228
Fnu4HI	GCNGC	9 cut(s)	208, 221, 255, 258, 380, 1386, 1552, 1634, 1862
FokI	GGATG	5 cut(s)	440, 683, 1031, 1301, 1415
Fsp4HI	GCNGC	9 cut(s)	208, 221, 255, 258, 380, 1386, 1552, 1634, 1862
FspBI	CTAG	4 cut(s)	315, 548, 777, 932
GlaI	GCGC	1 cut(s)	253
GluI	GCNGC	9 cut(s)	208, 221, 255, 258, 380, 1386, 1552, 1634, 1862
HaeII	RGCGCY	1 cut(s)	255
HaeIII	GGCC	4 cut(s)	242, 388, 592, 1983
HapII	CCGG	4 cut(s)	111, 330, 917, 1603
HgaI	GACGC	2 cut(s)	941, 1391
HhaI	GCGC	1 cut(s)	254
Hin1I	GRCGYC	1 cut(s)	252
Hin6I	GCGC	1 cut(s)	252
HinP1I	GCGC	1 cut(s)	252
HindIII	AAGCTT	4 cut(s)	1190, 1205, 1738, 1909
HinfI	GANTC	6 cut(s)	18, 155, 215, 311, 1777, 1988
HpaII	CCGG	4 cut(s)	111, 330, 917, 1603
HphI	GGTGA	4 cut(s)	136, 287, 881, 1270
Hpy166II	GTNNAC	6 cut(s)	1040, 1198, 1229, 1683, 1728, 1972
Hpy188I	TCNGA	6 cut(s)	63, 300, 481, 585, 1545, 1925
Hpy8I	GTNNAC	6 cut(s)	1040, 1198, 1229, 1683, 1728, 1972
Hpy99I	CGWCG	4 cut(s)	38, 41, 44, 47
HpyAV	CCTTC	5 cut(s)	100, 401, 407, 851, 1848
HpyCH4III	ACNGT	7 cut(s)	681, 1226, 1340, 1399, 1458, 1787, 1929
HpyCH4IV	ACGT	3 cut(s)	123, 613, 976
HpyF10VI	GCNNNNNNNGC	5 cut(s)	263, 385, 800, 1511, 1753
HpyF3I	CTNAG	9 cut(s)	383, 480, 485, 764, 1013, 1079, 1188, 1662, 1922
HpySE526I	ACGT	3 cut(s)	123, 613, 976
Hsp92I	GRCGYC	1 cut(s)	252
HspAI	GCGC	1 cut(s)	252
KasI	GGCGCC	1 cut(s)	251
Kpn2I	TCCGGA	2 cut(s)	916, 1602
KpnI	GGTACC	1 cut(s)	1872
Kzo9I	GATC	3 cut(s)	580, 1164, 1254
LmnI	GCTCC	4 cut(s)	332, 510, 1178, 1605
Lsp1109I	GCAGC	8 cut(s)	207, 219, 244, 366, 1397, 1563, 1620, 1873
LweI	GCATC	5 cut(s)	661, 838, 1054, 1279, 1492
MaeI	CTAG	4 cut(s)	315, 548, 777, 932
MaeII	ACGT	3 cut(s)	123, 613, 976
MaeIII	GTNAC	3 cut(s)	1276, 1448, 1618
MalI	GATC	3 cut(s)	582, 1166, 1256
MboI	GATC	3 cut(s)	580, 1164, 1254
MfeI	CAATTG	1 cut(s)	1560
MflI	RGATCY	1 cut(s)	1164
MhlI	GDGCHC	2 cut(s)	458, 1602
Mly113I	GGCGCC	1 cut(s)	252
MlyI	GAGTC	3 cut(s)	149, 320, 1786
MmeI	TCCRAC	2 cut(s)	1796, 1832
Mph1103I	ATGCAT	1 cut(s)	853
MroI	TCCGGA	2 cut(s)	916, 1602
MroXI	GAANNNNTTC	2 cut(s)	123, 1411
MseI	TTAA	8 cut(s)	324, 650, 705, 1071, 1139, 1643, 1688, 2023
MslI	CAYNNNNRTG	2 cut(s)	513, 975
MspA1I	CMGCKG	2 cut(s)	257, 866
MspI	CCGG	4 cut(s)	111, 330, 917, 1603
MspR9I	CCNGG	5 cut(s)	176, 330, 1044, 1305, 1848
MunI	CAATTG	1 cut(s)	1560
Mva1269I	GAATGC	2 cut(s)	1212, 1903
MvaI	CCWGG	4 cut(s)	176, 1044, 1305, 1848
MvnI	CGCG	1 cut(s)	733
MwoI	GCNNNNNNNGC	5 cut(s)	263, 385, 800, 1511, 1753
NarI	GGCGCC	1 cut(s)	252
NciI	CCSGG	1 cut(s)	330
NcoI	CCATGG	2 cut(s)	1217, 1978
NdeI	CATATG	1 cut(s)	1119
NdeII	GATC	3 cut(s)	580, 1164, 1254
NlaIV	GGNNCC	6 cut(s)	253, 334, 1309, 1719, 1870, 1890
NmuCI	GTSAC	2 cut(s)	1276, 1618
NsiI	ATGCAT	1 cut(s)	853
NspI	RCATGY	2 cut(s)	752, 1760
PaeI	GCATGC	1 cut(s)	752
PaeR7I	CTCGAG	1 cut(s)	594
PaqCI	CACCTGC	1 cut(s)	1289
PceI	AGGCCT	1 cut(s)	592
PcsI	WCGNNNNNNNCGW	3 cut(s)	39, 42, 840
PctI	GAATGC	2 cut(s)	1212, 1903
PdmI	GAANNNNTTC	2 cut(s)	123, 1411
PfeI	GAWTC	3 cut(s)	18, 215, 1988
PfoI	TCCNGGA	1 cut(s)	1846
PkrI	GCNGC	9 cut(s)	209, 222, 256, 259, 381, 1387, 1553, 1635, 1863
PleI	GAGTC	3 cut(s)	149, 319, 1785
PluTI	GGCGCC	1 cut(s)	255
PpsI	GAGTC	3 cut(s)	149, 319, 1785
Ppu21I	YACGTR	1 cut(s)	614
PsiI	TTATAA	1 cut(s)	1877
Psp1406I	AACGTT	1 cut(s)	123
Psp6I	CCWGG	4 cut(s)	174, 1042, 1303, 1846
PspGI	CCWGG	4 cut(s)	174, 1042, 1303, 1846
PspN4I	GGNNCC	6 cut(s)	253, 334, 1309, 1719, 1870, 1890
PspPI	GGNCC	4 cut(s)	240, 728, 1123, 1982
PspXI	VCTCGAGB	1 cut(s)	594
PstNI	CAGNNNCTG	1 cut(s)	965
PsuI	RGATCY	1 cut(s)	1164
PvuII	CAGCTG	1 cut(s)	866
RsaI	GTAC	4 cut(s)	1041, 1239, 1870, 1953
RsaNI	GTAC	4 cut(s)	1040, 1238, 1869, 1952
RseI	CAYNNNNRTG	2 cut(s)	513, 975
SaqAI	TTAA	8 cut(s)	324, 650, 705, 1071, 1139, 1643, 1688, 2023
SatI	GCNGC	9 cut(s)	208, 221, 255, 258, 380, 1386, 1552, 1634, 1862
Sau3AI	GATC	3 cut(s)	580, 1164, 1254
Sau96I	GGNCC	4 cut(s)	240, 728, 1123, 1982
SchI	GAGTC	3 cut(s)	149, 320, 1786
ScrFI	CCNGG	5 cut(s)	176, 330, 1044, 1305, 1848
SduI	GDGCHC	2 cut(s)	458, 1602
SfaNI	GCATC	5 cut(s)	661, 838, 1054, 1279, 1492
SfcI	CTRYAG	1 cut(s)	677
SfoI	GGCGCC	1 cut(s)	253
Sfr274I	CTCGAG	1 cut(s)	594
SinI	GGWCC	2 cut(s)	728, 1123
SlaI	CTCGAG	1 cut(s)	594
SmiMI	CAYNNNNRTG	2 cut(s)	513, 975
SmlI	CTYRAG	1 cut(s)	594
SmoI	CTYRAG	1 cut(s)	594
SphI	GCATGC	1 cut(s)	752
SseBI	AGGCCT	1 cut(s)	592
SsiI	CCGC	6 cut(s)	72, 134, 255, 720, 731, 1331
SspDI	GGCGCC	1 cut(s)	251
SspI	AATATT	1 cut(s)	1261
SspMI	CTAG	4 cut(s)	315, 548, 777, 932
StuI	AGGCCT	1 cut(s)	592
StyD4I	CCNGG	5 cut(s)	174, 328, 1042, 1303, 1846
StyI	CCWWGG	2 cut(s)	1217, 1978
TaaI	ACNGT	7 cut(s)	681, 1226, 1340, 1399, 1458, 1787, 1929
TaiI	ACGT	3 cut(s)	126, 616, 979
TaqI	TCGA	9 cut(s)	198, 234, 305, 541, 595, 834, 843, 1057, 1780
TatI	WGTACW	1 cut(s)	1951
TauI	GCSGC	1 cut(s)	257
TfiI	GAWTC	3 cut(s)	18, 215, 1988
Tru1I	TTAA	8 cut(s)	324, 650, 705, 1071, 1139, 1643, 1688, 2023
Tru9I	TTAA	8 cut(s)	324, 650, 705, 1071, 1139, 1643, 1688, 2023
TscAI	CASTG	6 cut(s)	458, 686, 1304, 1627, 1682, 1737
TseFI	GTSAC	2 cut(s)	1276, 1618
TseI	GCWGC	8 cut(s)	207, 220, 257, 379, 1385, 1551, 1633, 1861
Tsp45I	GTSAC	2 cut(s)	1276, 1618
TspDTI	ATGAA	7 cut(s)	444, 507, 1106, 1217, 1409, 1700, 1713
TspGWI	ACGGA	1 cut(s)	920
TspRI	CASTG	6 cut(s)	458, 686, 1304, 1627, 1682, 1737
VpaK11BI	GGWCC	2 cut(s)	728, 1123
XapI	RAATTY	3 cut(s)	301, 1707, 1996
XbaI	TCTAGA	1 cut(s)	547
XceI	RCATGY	2 cut(s)	752, 1760
XhoI	CTCGAG	1 cut(s)	594
XmiI	GTMKAC	1 cut(s)	1228
XmnI	GAANNNNTTC	2 cut(s)	123, 1411
XspI	CTAG	4 cut(s)	315, 548, 777, 932
Zsp2I	ATGCAT	1 cut(s)	853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.