Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0003165

Physical Location & Seq

Genomic Coordinates Forward (+)

5622561 .. 5626492

Gene Structure 3932 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010950

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGGCTTCCAAATCCAGATTCAACCTCATAGACGACGACGACGACGACGATTTCCAAACCCCTCTGACCCAAACCGCCACAGCTCGCACGCCCTTCAAAAGGCCCAAGCTCTCCGCCAAGCCCATCGCCTCCGGCAAAGAAAACGTTCCTCCTCCGCTTTGCTTCACCCCCAAAGACTCCATTTTGAACCAAACCCAGGTCTCCAAATCCACGCCAATCGAAGATTGCAGCTTGGATTCGCTGCCTGAAAGCCTCGACTGGGCCACACACGGCGCCGCTGCTTCTGCGTGCGTGGGTGACGAAAATGAGAAAGGGCAAGGGGGGTATTTGCGGAATTCGATAGAGTCTAGGTTGATTAAGCCTGGAGCCGATTGGGGTTTTGTTTCTGCTAATGGCGAGGATTTCGATGAGATTGATGTGCTGCTGAGGCTGAATGAGATTGAGGAAGAAGGGGAAGGAATCGTTGAGGATGAAACTGGGGGTTTGGTTGTTCACTGCCCTCTATGTGAAATTGACATTTCTGAGCTGAGCAATGAAGAGAGACAGCTCCACACTAATGATTGTCTTGACAAACAACAAGTTCGACCTCTAGACGAACAAGAGGGGTCTGGAATTGCTGATGATCCGATGGGGCCTCGAGTTTCTGGGCAAGTTGTTGAGTGGCTACGTGGTCTTGGTTTAGAGAAGTATGAGGAAGTTTTTATAAGGGAAGAGATTGATTGGGATGCTCTACATTGGCTCACAGAAGAGGATTTGTTTAGCATTGGCATTACGGCACTTGGTCCGCGTAAGAAGATTGCGCATGCACTCGCTCAACTTAGACAAGGGACTAGCAATGGAATTGAAGCACAAACTGCACAACCAAGAAAAAGGAGTGCCAATGGGGTCGAGGTGCTCGATGATGCATTGGAAGGAACAGTTGGTGATAGTAGTAAATCAGCTTCAAACAAGTTGATTACGGATTACTTTCCGGGATTTGGTGGTGCTAGGAAGCAGGTCTGCACCACCTCCAGAGAACAGCAAAGGGTAGAAAAGCGTCAGTCAGGTGCTGGCCATAAACGTGTTGTGGTGAAAAATCATGCCACAAATAGGAAACTCAGGGATGTTCCCTCATGGTGTTGTGTACCAGGAACACCATTTCGAGTAGATGCTTTTAAATATCTTAGACGGGATTGTTCTCATTGGTTTCTCACTCACTTTCATATGGATCATTATCAAGGTTTAACAAAGTCCTTTTGTCATGGAAAGATCTATTGCTCGTCCATTACAGCTAAGCTTGTAAACATGAAGCTTGGCATTCCATGGGACAGTATACAAGTTATACCCCTCAACCGAAAGATCAATATTGCAGGTATTGATGTCACCTGCTTGGATGCAAACCACTGCCCTGGTTCCATAATTATACTTTTTGAACCGCCTAACAGTAAGGCTGTTCTACATACAGGGGACTTTCGCTTTAGTGAGGATGCAGCAAGCGTGACTGTTTTGCGAACATCTTCTATTCATACGCTCATCCTTGATACCACTTACTGTAATCCACAGTATGACTTTCCAAAGCAGGAGGCTGTAATTCAGTTTGTCGTTGATGCAATTCAAGCTGAAACTTTCAACCCTAAAACTCTATTTCTGATTGGCAGCTACACAATTGGAAAGGAACGCCTTTACTTGGAGGTTGCTCGTGTGCTCCGGAAAAAGATTTATGTCACTGCTGGAAAGCTGCATATTTTAAAATGTTTGGATTTTCCTGAGGAGGATATGCAGTGGTTTACATTAAACGAACATGAAAGCCAAATTCATGTGGTGCCGATGTGGACACTGGCAAGCTTCAAGCGACTGAAGCATGTATCAAATCAATATGCGAGTCGATACAGTCTTATTGTTGCTTTTTCTCCAACTGGTTGGACTTTTGGTAAAGGAAAGAAGAAGTCTCCTGGAAGAAGGTGGCAGCAGGGTACCATTATAAGGTATGAGGTGCCATACAGTGAGCATTCGAGCTTTACTGAACTCAGACAGTTTGTGAAGCTTGTGTCCCCTGTACAAATAATACCAAGTGTGAACAATCATGGCCCAGATTCAGCGAATTCCATGATTTCTCTTCTCTCTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000715 GO:0000723 GO:0000726 GO:0000781 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0004518 GO:0004527 GO:0004529 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0008409 GO:0009987 GO:0016043 GO:0016233 GO:0016787 GO:0016788 GO:0016796 GO:0016895 GO:0031848 GO:0031974 GO:0031981 GO:0032200 GO:0033554 GO:0034641 GO:0035312 GO:0036297 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043247 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098687 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DRMBL Lactamase_B_2 SAM_1

Protein Analysis

703

Amino Acids

78.48

Weight (kDa)

5.94

Isoelectric Point (pI)

40.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAM_2	PF07647	216 - 274	5.6e-12	SAM domain (Sterile alpha motif)
SAM_1	PF00536	217 - 274	2.1e-17	SAM domain (Sterile alpha motif)
DRMBL	PF07522	585 - 688	1.7e-26	DNA repair metallo-beta-lactamase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45700 AT2G45700 AT3G26680 AT3G26680 AT3G26680 AT3G26680
fragaria_vesca	FvH4_2g36980 FvH4_2g36980 FvH4_2g36980 FvH4_2g36980
prunus_persica	Prupe.1G401600_v2.0.a1 Prupe.1G401600_v2.0.a1 Prupe.1G401600_v2.0.a1
pyrus_communis	pycom15g04570
rosa_chinensis	RchiOBHm_Chr6g0304781
rosa_laevigata	RLG00000009558 RLG00000010950 RLG00000018503 RLG00000033826
rosa_multiflora	Rmu_sc0003120.1_g000004 Rmu_sc0007437.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010130 Rroxscaffold_5G00359510 Rroxscaffold_7G00163500
rosa_rugosa	Rorug06G0334500
rosa_samantha	Rh1CG059900 Rh1DG063900 Rh4DG405200 Rh6AG132400 Rh6AG446400 Rh6BG129800 Rh6BG455200 Rh6CG128100 Rh6CG459900 Rh6DG115200 Rh6DG446700
rosa_wichuraiana	Rw6G038840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	704, 1961
AarI	CACCTGC	1 cut(s)	1373
Acc16I	TGCGCA	1 cut(s)	801
Acc36I	ACCTGC	3 cut(s)	985, 1340, 1373
Acc65I	GGTACC	1 cut(s)	1952
AccB1I	GGYRCC	4 cut(s)	272, 1801, 1952, 1972
AccI	GTMKAC	1 cut(s)	1312
AccII	CGCG	1 cut(s)	787
AccIII	TCCGGA	1 cut(s)	1686
AciI	CCGC	7 cut(s)	75, 114, 155, 276, 331, 785, 1415
AclI	AACGTT	1 cut(s)	144
AclWI	GGATC	2 cut(s)	617, 1215
AcoI	YGGCCR	1 cut(s)	1051
AcsI	RAATTY	3 cut(s)	334, 1791, 2080
AcuI	CTGAAG	1 cut(s)	1856
AcyI	GRCGYC	1 cut(s)	273
AfaI	GTAC	3 cut(s)	1125, 1954, 2037
AfiI	CCNNNNNNNGG	7 cut(s)	99, 196, 259, 977, 1089, 1666, 1962
AflIII	ACRYGT	1 cut(s)	1060
AgsI	TTSAA	9 cut(s)	22, 97, 187, 845, 945, 1412, 1595, 1609, 1828
AjnI	CCWGG	5 cut(s)	195, 361, 1126, 1387, 1930
AjuI	GAANNNNNNNTTGG	3 cut(s)	34, 903, 935
Alw21I	GWGCWC	2 cut(s)	897, 1686
Alw26I	GTCTC	3 cut(s)	205, 535, 1932
AlwI	GGATC	2 cut(s)	617, 1215
AlwNI	CAGNNNCTG	1 cut(s)	1049
Ama87I	CYCGRG	1 cut(s)	636
Aor13HI	TCCGGA	1 cut(s)	1686
AoxI	GGCC	5 cut(s)	101, 261, 632, 1051, 2065
ApeKI	GCWGC	8 cut(s)	228, 241, 278, 421, 1469, 1635, 1717, 1945
ApoI	RAATTY	3 cut(s)	334, 1791, 2080
Asp700I	GAANNNNTTC	2 cut(s)	144, 1495
Asp718I	GGTACC	1 cut(s)	1952
AspLEI	GCGC	2 cut(s)	275, 802
AspS9I	GGNCC	5 cut(s)	102, 261, 632, 782, 2066
AsuC2I	CCSGG	1 cut(s)	972
AsuHPI	GGTGA	5 cut(s)	157, 308, 935, 1081, 1354
AvaI	CYCGRG	1 cut(s)	636
AvaII	GGWCC	1 cut(s)	782
AxyI	CCTNAGG	1 cut(s)	1746
BalI	TGGCCA	1 cut(s)	1053
BanI	GGYRCC	4 cut(s)	272, 1801, 1952, 1972
BarI	GAAGNNNNNNTAC	2 cut(s)	925, 957
BauI	CACGAG	1 cut(s)	1677
Bbv12I	GWGCWC	2 cut(s)	897, 1686
BbvCI	CCTCAGC	1 cut(s)	425
BbvI	GCAGC	8 cut(s)	228, 240, 265, 408, 1481, 1647, 1704, 1957
BccI	CCATC	2 cut(s)	131, 622
BceAI	ACGGC	2 cut(s)	286, 789
BciT130I	CCWGG	5 cut(s)	197, 363, 1128, 1389, 1932
BcnI	CCSGG	1 cut(s)	972
BcoDI	GTCTC	3 cut(s)	205, 535, 1932
BfaI	CTAG	4 cut(s)	348, 590, 831, 987
BfoI	RGCGCY	1 cut(s)	276
BfuAI	ACCTGC	3 cut(s)	985, 1340, 1373
BglII	AGATCT	1 cut(s)	1248
BisI	GCNGC	9 cut(s)	229, 242, 276, 279, 422, 1470, 1636, 1718, 1946
BlpI	GCTNAGC	2 cut(s)	527, 1272
BlsI	GCNGC	9 cut(s)	230, 243, 277, 280, 423, 1471, 1637, 1719, 1947
Bme1390I	CCNGG	6 cut(s)	197, 363, 972, 1128, 1389, 1932
Bme18I	GGWCC	1 cut(s)	782
BmeT110I	CYCGRG	1 cut(s)	636
BmgT120I	GGNCC	5 cut(s)	102, 261, 632, 782, 2066
BmiI	GGNNCC	7 cut(s)	274, 367, 633, 1393, 1803, 1954, 1974
BmrFI	CCNGG	6 cut(s)	197, 363, 972, 1128, 1389, 1932
BmrI	ACTGGG	2 cut(s)	268, 486
BmsI	GCATC	6 cut(s)	715, 892, 1138, 1363, 1456, 1576
BmuI	ACTGGG	2 cut(s)	268, 486
BpmI	CTGGAG	2 cut(s)	384, 994
Bpu10I	CCTNAGC	1 cut(s)	425
Bpu1102I	GCTNAGC	2 cut(s)	527, 1272
BpuMI	CCSGG	1 cut(s)	972
BsaAI	YACGTR	1 cut(s)	668
BsaBI	GATNNNNATC	1 cut(s)	1212
BsaHI	GRCGYC	1 cut(s)	273
BsaI	GGTCTC	1 cut(s)	205
BsaJI	CCNNGG	3 cut(s)	195, 1301, 1387
BsaWI	WCCGGW	1 cut(s)	1686
Bsc4I	CCNNNNNNNGG	7 cut(s)	99, 196, 259, 977, 1089, 1666, 1962
Bse1I	ACTGG	4 cut(s)	263, 481, 1821, 1900
Bse21I	CCTNAGG	1 cut(s)	1746
Bse3DI	GCAATG	2 cut(s)	538, 841
Bse8I	GATNNNNATC	1 cut(s)	1212
BseAI	TCCGGA	1 cut(s)	1686
BseBI	CCWGG	5 cut(s)	197, 363, 1128, 1389, 1932
BseDI	CCNNGG	3 cut(s)	195, 1301, 1387
BseGI	GGATG	6 cut(s)	475, 730, 1108, 1378, 1471, 1512
BseJI	GATNNNNATC	1 cut(s)	1212
BseLI	CCNNNNNNNGG	7 cut(s)	99, 196, 259, 977, 1089, 1666, 1962
BseMI	GCAATG	2 cut(s)	538, 841
BseMII	CTCAG	6 cut(s)	416, 513, 518, 1111, 1737, 2020
BseNI	ACTGG	4 cut(s)	263, 481, 1821, 1900
BseRI	GAGGAG	2 cut(s)	141, 1763
BseXI	GCAGC	8 cut(s)	228, 240, 265, 408, 1481, 1647, 1704, 1957
BsgI	GTGCAG	2 cut(s)	840, 985
Bsh1236I	CGCG	1 cut(s)	787
BshFI	GGCC	5 cut(s)	103, 263, 634, 1053, 2067
BshNI	GGYRCC	4 cut(s)	272, 1801, 1952, 1972
BsiHKAI	GWGCWC	2 cut(s)	897, 1686
BsiHKCI	CYCGRG	1 cut(s)	636
BsiSI	CCGG	3 cut(s)	132, 971, 1687
BslFI	GGGAC	4 cut(s)	841, 1319, 1460, 2014
BslI	CCNNNNNNNGG	7 cut(s)	99, 196, 259, 977, 1089, 1666, 1962
BsmAI	GTCTC	3 cut(s)	205, 535, 1932
BsmFI	GGGAC	4 cut(s)	841, 1319, 1460, 2014
BsmI	GAATGC	2 cut(s)	1296, 1987
BsnI	GGCC	5 cut(s)	103, 263, 634, 1053, 2067
Bso31I	GGTCTC	1 cut(s)	205
BsoBI	CYCGRG	1 cut(s)	636
Bsp1286I	GDGCHC	2 cut(s)	897, 1686
Bsp13I	TCCGGA	1 cut(s)	1686
Bsp1407I	TGTACA	1 cut(s)	2035
Bsp143I	GATC	4 cut(s)	622, 1207, 1248, 1338
Bsp1720I	GCTNAGC	2 cut(s)	527, 1272
Bsp19I	CCATGG	1 cut(s)	1301
BspACI	CCGC	7 cut(s)	75, 114, 155, 276, 331, 785, 1415
BspANI	GGCC	5 cut(s)	103, 263, 634, 1053, 2067
BspCNI	CTCAG	6 cut(s)	417, 514, 519, 1110, 1738, 2019
BspEI	TCCGGA	1 cut(s)	1686
BspFNI	CGCG	1 cut(s)	787
BspLI	GGNNCC	7 cut(s)	274, 367, 633, 1393, 1803, 1954, 1974
BspMI	ACCTGC	3 cut(s)	985, 1340, 1373
BspPI	GGATC	2 cut(s)	617, 1215
BspT107I	GGYRCC	4 cut(s)	272, 1801, 1952, 1972
BspTNI	GGTCTC	1 cut(s)	205
BsrDI	GCAATG	2 cut(s)	538, 841
BsrGI	TGTACA	1 cut(s)	2035
BsrI	ACTGG	4 cut(s)	263, 481, 1821, 1900
BssECI	CCNNGG	3 cut(s)	195, 1301, 1387
BssMI	GATC	4 cut(s)	622, 1207, 1248, 1338
BssNAI	GTATAC	1 cut(s)	1313
BssNI	GRCGYC	1 cut(s)	273
BssSI	CACGAG	1 cut(s)	1677
BssT1I	CCWWGG	1 cut(s)	1301
Bst1107I	GTATAC	1 cut(s)	1313
Bst2BI	CACGAG	1 cut(s)	1677
Bst2UI	CCWGG	5 cut(s)	197, 363, 1128, 1389, 1932
Bst4CI	ACNGT	9 cut(s)	919, 1310, 1424, 1483, 1532, 1542, 1871, 1982, 2013
Bst6I	CTCTTC	4 cut(s)	531, 705, 741, 2100
BstACI	GRCGYC	1 cut(s)	273
BstAPI	GCANNNNNTGC	1 cut(s)	854
BstAUI	TGTACA	1 cut(s)	2035
BstBAI	YACGTR	1 cut(s)	668
BstC8I	GCNNGC	7 cut(s)	85, 89, 289, 804, 1051, 1474, 1822
BstDEI	CTNAG	9 cut(s)	425, 522, 527, 818, 1097, 1163, 1272, 1746, 2006
BstDSI	CCRYGG	1 cut(s)	1301
BstENI	CCTNNNNNAGG	1 cut(s)	97
BstF5I	GGATG	6 cut(s)	475, 730, 1108, 1378, 1471, 1512
BstFNI	CGCG	1 cut(s)	787
BstH2I	RGCGCY	1 cut(s)	276
BstHHI	GCGC	2 cut(s)	275, 802
BstKTI	GATC	4 cut(s)	625, 1210, 1251, 1341
BstMAI	GTCTC	3 cut(s)	205, 535, 1932
BstMBI	GATC	4 cut(s)	622, 1207, 1248, 1338
BstMWI	GCNNNNNNNGC	5 cut(s)	284, 427, 854, 1595, 1837
BstNI	CCWGG	5 cut(s)	197, 363, 1128, 1389, 1932
BstNSI	RCATGY	2 cut(s)	806, 1844
BstSCI	CCNGG	6 cut(s)	195, 361, 970, 1126, 1387, 1930
BstUI	CGCG	1 cut(s)	787
BstV1I	GCAGC	8 cut(s)	228, 240, 265, 408, 1481, 1647, 1704, 1957
BstX2I	RGATCY	1 cut(s)	1248
BstXI	CCANNNNNNTGG	2 cut(s)	1388, 1899
BstYI	RGATCY	1 cut(s)	1248
BstZ17I	GTATAC	1 cut(s)	1313
Bsu36I	CCTNAGG	1 cut(s)	1746
BsuRI	GGCC	5 cut(s)	103, 263, 634, 1053, 2067
BtgI	CCRYGG	1 cut(s)	1301
BtgZI	GCGATG	1 cut(s)	109
BtsCI	GGATG	6 cut(s)	475, 730, 1108, 1378, 1471, 1512
BtsI	GCAGTG	4 cut(s)	493, 1381, 1704, 1766
BtsIMutI	CAGTG	6 cut(s)	493, 1381, 1704, 1766, 1814, 1987
BveI	ACCTGC	3 cut(s)	985, 1340, 1373
Cac8I	GCNNGC	7 cut(s)	85, 89, 289, 804, 1051, 1474, 1822
CaiI	CAGNNNCTG	1 cut(s)	1049
CfoI	GCGC	2 cut(s)	275, 802
Cfr13I	GGNCC	5 cut(s)	102, 261, 632, 782, 2066
CseI	GACGC	1 cut(s)	1025
Csp6I	GTAC	3 cut(s)	1124, 1953, 2036
CviQI	GTAC	3 cut(s)	1124, 1953, 2036
DdeI	CTNAG	9 cut(s)	425, 522, 527, 818, 1097, 1163, 1272, 1746, 2006
DinI	GGCGCC	1 cut(s)	274
DpnI	GATC	4 cut(s)	624, 1209, 1250, 1340
DpnII	GATC	4 cut(s)	622, 1207, 1248, 1338
DraI	TTTAAA	2 cut(s)	1156, 1728
EaeI	YGGCCR	1 cut(s)	1051
Eam1104I	CTCTTC	4 cut(s)	531, 705, 741, 2100
EarI	CTCTTC	4 cut(s)	531, 705, 741, 2100
EciI	GGCGGA	1 cut(s)	103
Eco130I	CCWWGG	1 cut(s)	1301
Eco31I	GGTCTC	1 cut(s)	205
Eco47I	GGWCC	1 cut(s)	782
Eco57I	CTGAAG	1 cut(s)	1856
Eco81I	CCTNAGG	1 cut(s)	1746
Eco88I	CYCGRG	1 cut(s)	636
EcoNI	CCTNNNNNAGG	1 cut(s)	97
EcoO109I	RGGNCCY	1 cut(s)	632
EcoRI	GAATTC	2 cut(s)	334, 2080
EcoRII	CCWGG	5 cut(s)	195, 361, 1126, 1387, 1930
EcoT14I	CCWWGG	1 cut(s)	1301
EcoT22I	ATGCAT	1 cut(s)	907
EgeI	GGCGCC	1 cut(s)	274
EheI	GGCGCC	1 cut(s)	274
ErhI	CCWWGG	1 cut(s)	1301
FaqI	GGGAC	4 cut(s)	841, 1319, 1460, 2014
FauNDI	CATATG	1 cut(s)	1203
FblI	GTMKAC	1 cut(s)	1312
Fnu4HI	GCNGC	9 cut(s)	229, 242, 276, 279, 422, 1470, 1636, 1718, 1946
FokI	GGATG	6 cut(s)	482, 737, 1115, 1385, 1478, 1499
Fsp4HI	GCNGC	9 cut(s)	229, 242, 276, 279, 422, 1470, 1636, 1718, 1946
FspBI	CTAG	4 cut(s)	348, 590, 831, 987
FspI	TGCGCA	1 cut(s)	801
GlaI	GCGC	2 cut(s)	274, 801
GluI	GCNGC	9 cut(s)	229, 242, 276, 279, 422, 1470, 1636, 1718, 1946
GsuI	CTGGAG	2 cut(s)	384, 994
HaeII	RGCGCY	1 cut(s)	276
HaeIII	GGCC	5 cut(s)	103, 263, 634, 1053, 2067
HapII	CCGG	3 cut(s)	132, 971, 1687
HgaI	GACGC	1 cut(s)	1025
HhaI	GCGC	2 cut(s)	275, 802
Hin1I	GRCGYC	1 cut(s)	273
Hin6I	GCGC	2 cut(s)	273, 800
HinP1I	GCGC	2 cut(s)	273, 800
HindIII	AAGCTT	4 cut(s)	1274, 1289, 1822, 2021
HinfI	GANTC	7 cut(s)	18, 176, 236, 344, 459, 1861, 2072
HpaII	CCGG	3 cut(s)	132, 971, 1687
HphI	GGTGA	5 cut(s)	157, 308, 935, 1081, 1354
Hpy166II	GTNNAC	7 cut(s)	493, 1124, 1282, 1313, 1767, 1812, 2056
Hpy188I	TCNGA	5 cut(s)	66, 523, 627, 1629, 2009
Hpy188III	TCNNGA	7 cut(s)	15, 566, 590, 609, 1011, 1687, 1745
Hpy8I	GTNNAC	7 cut(s)	493, 1124, 1282, 1313, 1767, 1812, 2056
Hpy99I	CGWCG	5 cut(s)	38, 41, 44, 47, 50
HpyAV	CCTTC	5 cut(s)	103, 443, 449, 905, 1932
HpyCH4III	ACNGT	9 cut(s)	919, 1310, 1424, 1483, 1532, 1542, 1871, 1982, 2013
HpyCH4IV	ACGT	3 cut(s)	144, 667, 1060
HpyF10VI	GCNNNNNNNGC	5 cut(s)	284, 427, 854, 1595, 1837
HpyF3I	CTNAG	9 cut(s)	425, 522, 527, 818, 1097, 1163, 1272, 1746, 2006
HpySE526I	ACGT	3 cut(s)	144, 667, 1060
Hsp92I	GRCGYC	1 cut(s)	273
HspAI	GCGC	2 cut(s)	273, 800
KasI	GGCGCC	1 cut(s)	272
Kpn2I	TCCGGA	1 cut(s)	1686
KpnI	GGTACC	1 cut(s)	1956
Kzo9I	GATC	4 cut(s)	622, 1207, 1248, 1338
LmnI	GCTCC	3 cut(s)	365, 552, 1689
Lsp1109I	GCAGC	8 cut(s)	228, 240, 265, 408, 1481, 1647, 1704, 1957
LweI	GCATC	6 cut(s)	715, 892, 1138, 1363, 1456, 1576
MaeI	CTAG	4 cut(s)	348, 590, 831, 987
MaeII	ACGT	3 cut(s)	144, 667, 1060
MaeIII	GTNAC	4 cut(s)	296, 1360, 1477, 1702
MalI	GATC	4 cut(s)	624, 1209, 1250, 1340
MboI	GATC	4 cut(s)	622, 1207, 1248, 1338
MfeI	CAATTG	1 cut(s)	1644
MflI	RGATCY	1 cut(s)	1248
MhlI	GDGCHC	2 cut(s)	897, 1686
MlsI	TGGCCA	1 cut(s)	1053
MluNI	TGGCCA	1 cut(s)	1053
Mly113I	GGCGCC	1 cut(s)	273
MlyI	GAGTC	3 cut(s)	170, 353, 1870
MmeI	TCCRAC	2 cut(s)	1880, 1916
Mox20I	TGGCCA	1 cut(s)	1053
Mph1103I	ATGCAT	1 cut(s)	907
MroI	TCCGGA	1 cut(s)	1686
MroXI	GAANNNNTTC	2 cut(s)	144, 1495
MscI	TGGCCA	1 cut(s)	1053
MseI	TTAA	6 cut(s)	357, 1155, 1223, 1727, 1772, 2107
MslI	CAYNNNNRTG	2 cut(s)	555, 1059
Msp20I	TGGCCA	1 cut(s)	1053
MspA1I	CMGCKG	1 cut(s)	278
MspI	CCGG	3 cut(s)	132, 971, 1687
MspR9I	CCNGG	6 cut(s)	197, 363, 972, 1128, 1389, 1932
MunI	CAATTG	1 cut(s)	1644
Mva1269I	GAATGC	2 cut(s)	1296, 1987
MvaI	CCWGG	5 cut(s)	197, 363, 1128, 1389, 1932
MvnI	CGCG	1 cut(s)	787
MwoI	GCNNNNNNNGC	5 cut(s)	284, 427, 854, 1595, 1837
NarI	GGCGCC	1 cut(s)	273
NciI	CCSGG	1 cut(s)	972
NcoI	CCATGG	1 cut(s)	1301
NdeI	CATATG	1 cut(s)	1203
NdeII	GATC	4 cut(s)	622, 1207, 1248, 1338
NlaIV	GGNNCC	7 cut(s)	274, 367, 633, 1393, 1803, 1954, 1974
NmuCI	GTSAC	4 cut(s)	296, 1360, 1477, 1702
NsbI	TGCGCA	1 cut(s)	801
NsiI	ATGCAT	1 cut(s)	907
NspI	RCATGY	2 cut(s)	806, 1844
PaeI	GCATGC	1 cut(s)	806
PaeR7I	CTCGAG	1 cut(s)	636
PaqCI	CACCTGC	1 cut(s)	1373
PcsI	WCGNNNNNNNCGW	4 cut(s)	39, 42, 45, 894
PctI	GAATGC	2 cut(s)	1296, 1987
PdmI	GAANNNNTTC	2 cut(s)	144, 1495
PfeI	GAWTC	4 cut(s)	18, 236, 459, 2072
PfoI	TCCNGGA	2 cut(s)	970, 1930
PkrI	GCNGC	9 cut(s)	230, 243, 277, 280, 423, 1471, 1637, 1719, 1947
PleI	GAGTC	3 cut(s)	170, 352, 1869
PluTI	GGCGCC	1 cut(s)	276
PpsI	GAGTC	3 cut(s)	170, 352, 1869
Ppu21I	YACGTR	1 cut(s)	668
PsiI	TTATAA	2 cut(s)	704, 1961
Psp1406I	AACGTT	1 cut(s)	144
Psp6I	CCWGG	5 cut(s)	195, 361, 1126, 1387, 1930
PspGI	CCWGG	5 cut(s)	195, 361, 1126, 1387, 1930
PspN4I	GGNNCC	7 cut(s)	274, 367, 633, 1393, 1803, 1954, 1974
PspPI	GGNCC	5 cut(s)	102, 261, 632, 782, 2066
PspXI	VCTCGAGB	1 cut(s)	636
PstNI	CAGNNNCTG	1 cut(s)	1049
PsuI	RGATCY	1 cut(s)	1248
RsaI	GTAC	3 cut(s)	1125, 1954, 2037
RsaNI	GTAC	3 cut(s)	1124, 1953, 2036
RseI	CAYNNNNRTG	2 cut(s)	555, 1059
SaqAI	TTAA	6 cut(s)	357, 1155, 1223, 1727, 1772, 2107
SatI	GCNGC	9 cut(s)	229, 242, 276, 279, 422, 1470, 1636, 1718, 1946
Sau3AI	GATC	4 cut(s)	622, 1207, 1248, 1338
Sau96I	GGNCC	5 cut(s)	102, 261, 632, 782, 2066
SchI	GAGTC	3 cut(s)	170, 353, 1870
ScrFI	CCNGG	6 cut(s)	197, 363, 972, 1128, 1389, 1932
SduI	GDGCHC	2 cut(s)	897, 1686
SfaNI	GCATC	6 cut(s)	715, 892, 1138, 1363, 1456, 1576
SfoI	GGCGCC	1 cut(s)	274
Sfr274I	CTCGAG	1 cut(s)	636
SinI	GGWCC	1 cut(s)	782
SlaI	CTCGAG	1 cut(s)	636
SmiMI	CAYNNNNRTG	2 cut(s)	555, 1059
SmlI	CTYRAG	1 cut(s)	636
SmoI	CTYRAG	1 cut(s)	636
SphI	GCATGC	1 cut(s)	806
SsiI	CCGC	7 cut(s)	75, 114, 155, 276, 331, 785, 1415
SspDI	GGCGCC	1 cut(s)	272
SspI	AATATT	1 cut(s)	1345
SspMI	CTAG	4 cut(s)	348, 590, 831, 987
StyD4I	CCNGG	6 cut(s)	195, 361, 970, 1126, 1387, 1930
StyI	CCWWGG	1 cut(s)	1301
TaaI	ACNGT	9 cut(s)	919, 1310, 1424, 1483, 1532, 1542, 1871, 1982, 2013
TaiI	ACGT	3 cut(s)	147, 670, 1063
TatI	WGTACW	1 cut(s)	2035
TauI	GCSGC	1 cut(s)	278
TfiI	GAWTC	4 cut(s)	18, 236, 459, 2072
Tru1I	TTAA	6 cut(s)	357, 1155, 1223, 1727, 1772, 2107
Tru9I	TTAA	6 cut(s)	357, 1155, 1223, 1727, 1772, 2107
TscAI	CASTG	6 cut(s)	500, 1388, 1711, 1766, 1821, 1987
TseFI	GTSAC	4 cut(s)	296, 1360, 1477, 1702
TseI	GCWGC	8 cut(s)	228, 241, 278, 421, 1469, 1635, 1717, 1945
Tsp45I	GTSAC	4 cut(s)	296, 1360, 1477, 1702
TspDTI	ATGAA	7 cut(s)	486, 549, 1190, 1301, 1493, 1784, 1797
TspGWI	ACGGA	1 cut(s)	974
TspRI	CASTG	6 cut(s)	500, 1388, 1711, 1766, 1821, 1987
VpaK11BI	GGWCC	1 cut(s)	782
XagI	CCTNNNNNAGG	1 cut(s)	97
XapI	RAATTY	3 cut(s)	334, 1791, 2080
XbaI	TCTAGA	1 cut(s)	589
XceI	RCATGY	2 cut(s)	806, 1844
XhoI	CTCGAG	1 cut(s)	636
XmiI	GTMKAC	1 cut(s)	1312
XmnI	GAANNNNTTC	2 cut(s)	144, 1495
XspI	CTAG	4 cut(s)	348, 590, 831, 987
Zsp2I	ATGCAT	1 cut(s)	907

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.