DNA cross-link repair protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45700 AT2G45700 AT3G26680 AT3G26680 AT3G26680 AT3G26680 |
| fragaria_vesca | FvH4_2g36980 FvH4_2g36980 FvH4_2g36980 FvH4_2g36980 |
| prunus_persica | Prupe.1G401600_v2.0.a1 Prupe.1G401600_v2.0.a1 Prupe.1G401600_v2.0.a1 |
| pyrus_communis | pycom15g04570 |
| rosa_chinensis | RchiOBHm_Chr6g0304781 |
| rosa_laevigata | RLG00000009558 RLG00000010950 RLG00000018503 RLG00000033826 |
| rosa_multiflora | Rmu_sc0003120.1_g000004 Rmu_sc0007437.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00010130 Rroxscaffold_5G00359510 Rroxscaffold_7G00163500 |
| rosa_rugosa | Rorug06G0334500 |
| rosa_samantha | Rh1CG059900 Rh1DG063900 Rh4DG405200 Rh6AG132400 Rh6AG446400 Rh6BG129800 Rh6BG455200 Rh6CG128100 Rh6CG459900 Rh6DG115200 Rh6DG446700 |
| rosa_wichuraiana | Rw6G038840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 144 |
| AcsI | RAATTY | 1 cut(s) | 82 |
| AgsI | TTSAA | 1 cut(s) | 261 |
| Ama87I | CYCGRG | 1 cut(s) | 111 |
| AoxI | GGCC | 1 cut(s) | 173 |
| ApoI | RAATTY | 1 cut(s) | 82 |
| AsuHPI | GGTGA | 1 cut(s) | 62 |
| AvaI | CYCGRG | 1 cut(s) | 111 |
| BbsI | GAAGAC | 1 cut(s) | 159 |
| BfaI | CTAG | 1 cut(s) | 96 |
| BmeT110I | CYCGRG | 1 cut(s) | 111 |
| BpiI | GAAGAC | 1 cut(s) | 159 |
| BpuEI | CTTGAG | 1 cut(s) | 55 |
| Bsa29I | ATCGAT | 1 cut(s) | 161 |
| Bse3DI | GCAATG | 1 cut(s) | 205 |
| BseCI | ATCGAT | 1 cut(s) | 161 |
| BseGI | GGATG | 1 cut(s) | 220 |
| BseMI | GCAATG | 1 cut(s) | 205 |
| BseRI | GAGGAG | 1 cut(s) | 169 |
| Bsh1285I | CGRYCG | 1 cut(s) | 19 |
| BshFI | GGCC | 1 cut(s) | 175 |
| BshVI | ATCGAT | 1 cut(s) | 161 |
| BsiEI | CGRYCG | 1 cut(s) | 19 |
| BsiHKCI | CYCGRG | 1 cut(s) | 111 |
| BsnI | GGCC | 1 cut(s) | 175 |
| BsoBI | CYCGRG | 1 cut(s) | 111 |
| Bsp143I | GATC | 2 cut(s) | 16, 158 |
| BspACI | CCGC | 1 cut(s) | 144 |
| BspANI | GGCC | 1 cut(s) | 175 |
| BspDI | ATCGAT | 1 cut(s) | 161 |
| BsrDI | GCAATG | 1 cut(s) | 205 |
| BssMI | GATC | 2 cut(s) | 16, 158 |
| Bst4CI | ACNGT | 1 cut(s) | 137 |
| BstEII | GGTNACC | 1 cut(s) | 50 |
| BstF5I | GGATG | 1 cut(s) | 220 |
| BstKTI | GATC | 2 cut(s) | 19, 161 |
| BstMBI | GATC | 2 cut(s) | 16, 158 |
| BstMCI | CGRYCG | 1 cut(s) | 19 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 239 |
| BstPI | GGTNACC | 1 cut(s) | 50 |
| BstV2I | GAAGAC | 1 cut(s) | 159 |
| Bsu15I | ATCGAT | 1 cut(s) | 161 |
| BsuRI | GGCC | 1 cut(s) | 175 |
| BsuTUI | ATCGAT | 1 cut(s) | 161 |
| BtsCI | GGATG | 1 cut(s) | 220 |
| ClaI | ATCGAT | 1 cut(s) | 161 |
| CviJI | RGCY | 4 cut(s) | 109, 116, 175, 242 |
| CviKI_1 | RGCY | 4 cut(s) | 109, 116, 175, 242 |
| DpnI | GATC | 2 cut(s) | 18, 160 |
| DpnII | GATC | 2 cut(s) | 16, 158 |
| DraI | TTTAAA | 1 cut(s) | 271 |
| Eco88I | CYCGRG | 1 cut(s) | 111 |
| Eco91I | GGTNACC | 1 cut(s) | 50 |
| EcoO65I | GGTNACC | 1 cut(s) | 50 |
| EcoRI | GAATTC | 1 cut(s) | 82 |
| FaiI | YATR | 1 cut(s) | 266 |
| FauI | CCCGC | 1 cut(s) | 137 |
| FokI | GGATG | 1 cut(s) | 227 |
| FspBI | CTAG | 1 cut(s) | 96 |
| HaeIII | GGCC | 1 cut(s) | 175 |
| HinfI | GANTC | 2 cut(s) | 92, 204 |
| HphI | GGTGA | 1 cut(s) | 62 |
| HpyAV | CCTTC | 1 cut(s) | 188 |
| HpyCH4III | ACNGT | 1 cut(s) | 137 |
| HpyCH4IV | ACGT | 1 cut(s) | 247 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 239 |
| HpySE526I | ACGT | 1 cut(s) | 247 |
| Kzo9I | GATC | 2 cut(s) | 16, 158 |
| MaeI | CTAG | 1 cut(s) | 96 |
| MaeII | ACGT | 1 cut(s) | 247 |
| MaeIII | GTNAC | 2 cut(s) | 50, 131 |
| MalI | GATC | 2 cut(s) | 18, 160 |
| MboI | GATC | 2 cut(s) | 16, 158 |
| MboII | GAAGA | 2 cut(s) | 159, 203 |
| MluCI | AATT | 2 cut(s) | 82, 261 |
| MlyI | GAGTC | 1 cut(s) | 101 |
| MnlI | CCTC | 7 cut(s) | 61, 120, 147, 165, 181, 205, 232 |
| MseI | TTAA | 3 cut(s) | 42, 105, 270 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 239 |
| NdeII | GATC | 2 cut(s) | 16, 158 |
| NmuCI | GTSAC | 1 cut(s) | 50 |
| PaeR7I | CTCGAG | 1 cut(s) | 111 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 158, 167 |
| PfeI | GAWTC | 1 cut(s) | 204 |
| Ple19I | CGATCG | 1 cut(s) | 19 |
| PleI | GAGTC | 1 cut(s) | 100 |
| PpsI | GAGTC | 1 cut(s) | 100 |
| PspEI | GGTNACC | 1 cut(s) | 50 |
| PspXI | VCTCGAGB | 1 cut(s) | 111 |
| PvuI | CGATCG | 1 cut(s) | 19 |
| SaqAI | TTAA | 3 cut(s) | 42, 105, 270 |
| Sau3AI | GATC | 2 cut(s) | 16, 158 |
| SchI | GAGTC | 1 cut(s) | 101 |
| SetI | ASST | 2 cut(s) | 101, 250 |
| Sfr274I | CTCGAG | 1 cut(s) | 111 |
| SlaI | CTCGAG | 1 cut(s) | 111 |
| SmlI | CTYRAG | 2 cut(s) | 34, 111 |
| SmoI | CTYRAG | 2 cut(s) | 34, 111 |
| Sse9I | AATT | 2 cut(s) | 82, 261 |
| SsiI | CCGC | 1 cut(s) | 144 |
| SspMI | CTAG | 1 cut(s) | 96 |
| TaaI | ACNGT | 1 cut(s) | 137 |
| TaiI | ACGT | 1 cut(s) | 250 |
| TaqI | TCGA | 7 cut(s) | 15, 19, 86, 112, 152, 161, 170 |
| TasI | AATT | 2 cut(s) | 82, 261 |
| TfiI | GAWTC | 1 cut(s) | 204 |
| Tru1I | TTAA | 3 cut(s) | 42, 105, 270 |
| Tru9I | TTAA | 3 cut(s) | 42, 105, 270 |
| TseFI | GTSAC | 1 cut(s) | 50 |
| Tsp45I | GTSAC | 1 cut(s) | 50 |
| TspDTI | ATGAA | 2 cut(s) | 17, 231 |
| XapI | RAATTY | 1 cut(s) | 82 |
| XhoI | CTCGAG | 1 cut(s) | 111 |
| XspI | CTAG | 1 cut(s) | 96 |