Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0003165

Physical Location & Seq

Genomic Coordinates Forward (+)

66811428 .. 66815588

Gene Structure 4161 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG455200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGGCTTCCAAATCCAGATTCAACCTCATAGACGACGACGATTTCCAAACCCCTCTGACCCAAACCGCCACAGCTCGCACGCCCTTCAAAAAGCCCAAGCTCTCCGGCAAAGAAAACGTTCCTCCTCCGCTTTGCTTCACCCCCAGAGACTCCATTTTGAACCAAACCCAGGTCTCCAAATCCACGCCAATCGAAGATTGCAGCTTGGATTCGCTGCCTGAAAGCCTCGACTGGGCCACCCACGGCGCCGCTGCTTCTGCGTGCGTGGGTGAGGAAAATGAGAAAGGGCAAGGGGGGTATTTGCGGAATTCGATAGAGTCTAGGTTGATTAAGCCCGGAGCCGATTGGGGTTTTGGTTCTGGTAATGGCGAGGAGATTGATGTGCTGATGAGGCTGAATGGGATTGAGGAAGAAGGGGAAGGAATTGTTGAGGATGAAAATGGGGGTTTGGTGGTTCAGTGCCCTCTATGTGAGATTGACATTTCTGAGCTGAGCAATGAAGAAAGACAGCTCCACACTAATGATTGTCTTGACAAACAACAAGTTCGACCTGTAGACGAACAAGAGGGGGGGTCTGGAATTGCTGATGATCCGATGGGGCCTCGAGTTTCTGGGCAAGTTGTTGAGTGGCTACGCGGTCTTGGTTTAGACAAGTATGTGGAAGTTTTTATAAGGGAAGAGATTGATTGGGACGCTCTACATTGGCTCACAGAAGAGGATTTGTTTAACATTGGCATTACGGCACTTGGTCCACGTAAGAAGATTGTGCATGCACTTGCTCAACTTGGACAAGGGACTAGCAATGGAATTGAAGCACAAACTGCACAGCCAAGAAAAAGGAGTGCCAATGGGGTCGAGGTGCTCGATGATGCATTGGAAGGAACAGTTGGTGATAGTAGTAAATCAGCTTCAAACAAGTTGATTACGGATTACTTTCCGGGATTTGGTGGTGCTAGGAAGCAGGTCTGCACCACCTCCAGAGAACAGCAAAGGGTAGAAAAGCGTCAGTCAGGTGCTGGTCATAAACGTGTTGTGGTGAAAAATCATGCCACAAATAGGAAACTCAGGGATGTTCCCTCATGGTGTTGTGTACCAGGAACACCATTTCGAGTAGATGCTTTTAAATATCTTAGACGGGATTGTTCTCATTGGTTTCTCACTCACTTTCATATGGACCATTATCAAGGTTTAACAAAGTCCTTTTGTCATGGAAAGATCTATTGCTCCTCCATTACAGCTAAGCTTGTAAACATGAAGCTTGGCATTCCATGGGACAGTATACAAGTTGTACCCCTCAACCGAAAGATCAATATTGCAGGTATTGATGTCACCTGCTTGGATGCAAACCACTGCCCTGGTTCCATAATTATACTTTTTGAACCGCCTAACAGTAAGGCTGTTCTACATACAGGGGACTTTCGCTTTAGTGAGGATGCAGCAAGCATGACTGTTTTGCGAACATCTTCTATTCATACGCTCATCCTTGATACCACTTACTGTAACCCACAGGTAACCCTGGCACATGAATTATCACATTATGTCAAGCAATTGGTTCAGAATTGCAACAATGTCAATATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000715 GO:0000723 GO:0000726 GO:0000781 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0004518 GO:0004527 GO:0004529 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0008409 GO:0009987 GO:0016043 GO:0016233 GO:0016787 GO:0016788 GO:0016796 GO:0016895 GO:0031848 GO:0031974 GO:0031981 GO:0032200 GO:0033554 GO:0034641 GO:0035312 GO:0036297 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043247 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098687 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DRMBL Lactamase_B_2 SAM_1

Protein Analysis

526

Amino Acids

58.06

Weight (kDa)

5.57

Isoelectric Point (pI)

38.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAM_2	PF07647	205 - 261	2.1e-11	SAM domain (Sterile alpha motif)
SAM_1	PF00536	206 - 262	1.3e-16	SAM domain (Sterile alpha motif)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45700 AT2G45700 AT3G26680 AT3G26680 AT3G26680 AT3G26680
fragaria_vesca	FvH4_2g36980 FvH4_2g36980 FvH4_2g36980 FvH4_2g36980
prunus_persica	Prupe.1G401600_v2.0.a1 Prupe.1G401600_v2.0.a1 Prupe.1G401600_v2.0.a1
pyrus_communis	pycom15g04570
rosa_chinensis	RchiOBHm_Chr6g0304781
rosa_laevigata	RLG00000009558 RLG00000010950 RLG00000018503 RLG00000033826
rosa_multiflora	Rmu_sc0003120.1_g000004 Rmu_sc0007437.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010130 Rroxscaffold_5G00359510 Rroxscaffold_7G00163500
rosa_rugosa	Rorug06G0334500
rosa_samantha	Rh1CG059900 Rh1DG063900 Rh4DG405200 Rh6AG132400 Rh6AG446400 Rh6BG129800 Rh6BG455200 Rh6CG128100 Rh6CG459900 Rh6DG115200 Rh6DG446700
rosa_wichuraiana	Rw6G038840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	671
AarI	CACCTGC	1 cut(s)	1340
Acc36I	ACCTGC	3 cut(s)	952, 1307, 1340
AccB1I	GGYRCC	1 cut(s)	245
AccI	GTMKAC	2 cut(s)	555, 1279
AccII	CGCG	1 cut(s)	636
AciI	CCGC	6 cut(s)	66, 128, 249, 304, 636, 1382
AclI	AACGTT	1 cut(s)	117
AclWI	GGATC	1 cut(s)	584
AcsI	RAATTY	1 cut(s)	307
AcyI	GRCGYC	1 cut(s)	246
AfaI	GTAC	2 cut(s)	1092, 1290
AfiI	CCNNNNNNNGG	4 cut(s)	169, 232, 944, 1056
AflIII	ACRYGT	1 cut(s)	1027
AgsI	TTSAA	6 cut(s)	22, 88, 160, 812, 912, 1379
AjnI	CCWGG	4 cut(s)	168, 1093, 1354, 1515
AjuI	GAANNNNNNNTTGG	3 cut(s)	34, 870, 902
AluBI	AGCT	9 cut(s)	74, 100, 204, 490, 511, 908, 1238, 1243, 1258
AluI	AGCT	9 cut(s)	74, 100, 204, 490, 511, 908, 1238, 1243, 1258
Alw21I	GWGCWC	1 cut(s)	864
Alw26I	GTCTC	2 cut(s)	141, 178
AlwI	GGATC	1 cut(s)	584
AlwNI	CAGNNNCTG	1 cut(s)	1016
Ama87I	CYCGRG	1 cut(s)	603
AoxI	GGCC	2 cut(s)	234, 599
ApeKI	GCWGC	4 cut(s)	201, 214, 251, 1436
ApoI	RAATTY	1 cut(s)	307
Asp700I	GAANNNNTTC	2 cut(s)	117, 1462
AspLEI	GCGC	1 cut(s)	248
AspS9I	GGNCC	4 cut(s)	234, 599, 749, 1174
AsuC2I	CCSGG	2 cut(s)	336, 939
AsuHPI	GGTGA	5 cut(s)	130, 281, 902, 1048, 1321
AvaI	CYCGRG	1 cut(s)	603
AvaII	GGWCC	2 cut(s)	749, 1174
BaeGI	GKGCMC	1 cut(s)	464
BanI	GGYRCC	1 cut(s)	245
BarI	GAAGNNNNNNTAC	2 cut(s)	892, 924
Bbv12I	GWGCWC	1 cut(s)	864
BbvI	GCAGC	4 cut(s)	201, 213, 238, 1448
BccI	CCATC	1 cut(s)	589
BceAI	ACGGC	2 cut(s)	259, 756
BciT130I	CCWGG	4 cut(s)	170, 1095, 1356, 1517
BcnI	CCSGG	2 cut(s)	336, 939
BcoDI	GTCTC	2 cut(s)	141, 178
BfaI	CTAG	3 cut(s)	321, 798, 954
BfmI	CTRYAG	1 cut(s)	552
BfoI	RGCGCY	1 cut(s)	249
BfuAI	ACCTGC	3 cut(s)	952, 1307, 1340
BglII	AGATCT	1 cut(s)	1215
BisI	GCNGC	5 cut(s)	202, 215, 249, 252, 1437
BlpI	GCTNAGC	2 cut(s)	491, 1239
BlsI	GCNGC	5 cut(s)	203, 216, 250, 253, 1438
Bme1390I	CCNGG	6 cut(s)	170, 336, 939, 1095, 1356, 1517
Bme18I	GGWCC	2 cut(s)	749, 1174
BmeT110I	CYCGRG	1 cut(s)	603
BmgT120I	GGNCC	4 cut(s)	234, 599, 749, 1174
BmiI	GGNNCC	4 cut(s)	247, 340, 600, 1360
BmrFI	CCNGG	6 cut(s)	170, 336, 939, 1095, 1356, 1517
BmrI	ACTGGG	1 cut(s)	241
BmsI	GCATC	4 cut(s)	859, 1105, 1330, 1423
BmuI	ACTGGG	1 cut(s)	241
BpmI	CTGGAG	1 cut(s)	961
Bpu1102I	GCTNAGC	2 cut(s)	491, 1239
BpuMI	CCSGG	2 cut(s)	336, 939
BsaAI	YACGTR	1 cut(s)	755
BsaHI	GRCGYC	1 cut(s)	246
BsaI	GGTCTC	1 cut(s)	178
BsaJI	CCNNGG	5 cut(s)	168, 241, 1268, 1354, 1515
Bsc4I	CCNNNNNNNGG	4 cut(s)	169, 232, 944, 1056
Bse1I	ACTGG	1 cut(s)	236
Bse3DI	GCAATG	2 cut(s)	502, 808
BseBI	CCWGG	4 cut(s)	170, 1095, 1356, 1517
BseDI	CCNNGG	5 cut(s)	168, 241, 1268, 1354, 1515
BseGI	GGATG	5 cut(s)	439, 1075, 1345, 1438, 1479
BseLI	CCNNNNNNNGG	4 cut(s)	169, 232, 944, 1056
BseMI	GCAATG	2 cut(s)	502, 808
BseMII	CTCAG	3 cut(s)	477, 482, 1078
BseNI	ACTGG	1 cut(s)	236
BseRI	GAGGAG	3 cut(s)	114, 386, 1216
BseSI	GKGCMC	1 cut(s)	464
BseXI	GCAGC	4 cut(s)	201, 213, 238, 1448
BsgI	GTGCAG	2 cut(s)	807, 952
Bsh1236I	CGCG	1 cut(s)	636
BshFI	GGCC	2 cut(s)	236, 601
BshNI	GGYRCC	1 cut(s)	245
BsiHKAI	GWGCWC	1 cut(s)	864
BsiHKCI	CYCGRG	1 cut(s)	603
BsiSI	CCGG	3 cut(s)	105, 336, 938
BslFI	GGGAC	4 cut(s)	704, 808, 1286, 1427
BslI	CCNNNNNNNGG	4 cut(s)	169, 232, 944, 1056
BsmAI	GTCTC	2 cut(s)	141, 178
BsmFI	GGGAC	4 cut(s)	704, 808, 1286, 1427
BsmI	GAATGC	1 cut(s)	1263
BsnI	GGCC	2 cut(s)	236, 601
Bso31I	GGTCTC	1 cut(s)	178
BsoBI	CYCGRG	1 cut(s)	603
Bsp1286I	GDGCHC	2 cut(s)	464, 864
Bsp143I	GATC	3 cut(s)	589, 1215, 1305
Bsp1720I	GCTNAGC	2 cut(s)	491, 1239
Bsp19I	CCATGG	1 cut(s)	1268
BspACI	CCGC	6 cut(s)	66, 128, 249, 304, 636, 1382
BspANI	GGCC	2 cut(s)	236, 601
BspCNI	CTCAG	3 cut(s)	478, 483, 1077
BspFNI	CGCG	1 cut(s)	636
BspLI	GGNNCC	4 cut(s)	247, 340, 600, 1360
BspMI	ACCTGC	3 cut(s)	952, 1307, 1340
BspPI	GGATC	1 cut(s)	584
BspT107I	GGYRCC	1 cut(s)	245
BspTNI	GGTCTC	1 cut(s)	178
BsrDI	GCAATG	2 cut(s)	502, 808
BsrI	ACTGG	1 cut(s)	236
BssECI	CCNNGG	5 cut(s)	168, 241, 1268, 1354, 1515
BssMI	GATC	3 cut(s)	589, 1215, 1305
BssNAI	GTATAC	1 cut(s)	1280
BssNI	GRCGYC	1 cut(s)	246
BssT1I	CCWWGG	1 cut(s)	1268
Bst1107I	GTATAC	1 cut(s)	1280
Bst2UI	CCWGG	4 cut(s)	170, 1095, 1356, 1517
Bst4CI	ACNGT	5 cut(s)	886, 1277, 1391, 1450, 1499
Bst6I	CTCTTC	2 cut(s)	672, 708
BstACI	GRCGYC	1 cut(s)	246
BstAPI	GCANNNNNTGC	1 cut(s)	821
BstBAI	YACGTR	1 cut(s)	755
BstC8I	GCNNGC	5 cut(s)	76, 80, 262, 771, 1441
BstDEI	CTNAG	5 cut(s)	486, 491, 1064, 1130, 1239
BstDSI	CCRYGG	2 cut(s)	241, 1268
BstEII	GGTNACC	1 cut(s)	1510
BstF5I	GGATG	5 cut(s)	439, 1075, 1345, 1438, 1479
BstFNI	CGCG	1 cut(s)	636
BstH2I	RGCGCY	1 cut(s)	249
BstHHI	GCGC	1 cut(s)	248
BstKTI	GATC	3 cut(s)	592, 1218, 1308
BstMAI	GTCTC	2 cut(s)	141, 178
BstMBI	GATC	3 cut(s)	589, 1215, 1305
BstMWI	GCNNNNNNNGC	3 cut(s)	257, 391, 821
BstNI	CCWGG	4 cut(s)	170, 1095, 1356, 1517
BstNSI	RCATGY	1 cut(s)	773
BstPI	GGTNACC	1 cut(s)	1510
BstSCI	CCNGG	6 cut(s)	168, 334, 937, 1093, 1354, 1515
BstSFI	CTRYAG	1 cut(s)	552
BstSLI	GKGCMC	1 cut(s)	464
BstUI	CGCG	1 cut(s)	636
BstV1I	GCAGC	4 cut(s)	201, 213, 238, 1448
BstX2I	RGATCY	1 cut(s)	1215
BstXI	CCANNNNNNTGG	1 cut(s)	1355
BstYI	RGATCY	1 cut(s)	1215
BstZ17I	GTATAC	1 cut(s)	1280
BsuRI	GGCC	2 cut(s)	236, 601
BtgI	CCRYGG	2 cut(s)	241, 1268
BtsCI	GGATG	5 cut(s)	439, 1075, 1345, 1438, 1479
BtsI	GCAGTG	1 cut(s)	1348
BtsIMutI	CAGTG	2 cut(s)	464, 1348
BveI	ACCTGC	3 cut(s)	952, 1307, 1340
Cac8I	GCNNGC	5 cut(s)	76, 80, 262, 771, 1441
CaiI	CAGNNNCTG	1 cut(s)	1016
CfoI	GCGC	1 cut(s)	248
Cfr13I	GGNCC	4 cut(s)	234, 599, 749, 1174
CseI	GACGC	2 cut(s)	701, 992
Csp6I	GTAC	2 cut(s)	1091, 1289
CviAII	CATG	8 cut(s)	770, 1046, 1080, 1208, 1252, 1269, 1444, 1523
CviQI	GTAC	2 cut(s)	1091, 1289
DdeI	CTNAG	5 cut(s)	486, 491, 1064, 1130, 1239
DinI	GGCGCC	1 cut(s)	247
DpnI	GATC	3 cut(s)	591, 1217, 1307
DpnII	GATC	3 cut(s)	589, 1215, 1305
DraI	TTTAAA	1 cut(s)	1123
Eam1104I	CTCTTC	2 cut(s)	672, 708
EarI	CTCTTC	2 cut(s)	672, 708
Eco130I	CCWWGG	1 cut(s)	1268
Eco31I	GGTCTC	1 cut(s)	178
Eco47I	GGWCC	2 cut(s)	749, 1174
Eco88I	CYCGRG	1 cut(s)	603
Eco91I	GGTNACC	1 cut(s)	1510
EcoO109I	RGGNCCY	1 cut(s)	599
EcoO65I	GGTNACC	1 cut(s)	1510
EcoRI	GAATTC	1 cut(s)	307
EcoRII	CCWGG	4 cut(s)	168, 1093, 1354, 1515
EcoT14I	CCWWGG	1 cut(s)	1268
EcoT22I	ATGCAT	1 cut(s)	874
EgeI	GGCGCC	1 cut(s)	247
EheI	GGCGCC	1 cut(s)	247
ErhI	CCWWGG	1 cut(s)	1268
FaeI	CATG	8 cut(s)	773, 1049, 1083, 1211, 1255, 1272, 1447, 1526
FaqI	GGGAC	4 cut(s)	704, 808, 1286, 1427
FatI	CATG	8 cut(s)	769, 1045, 1079, 1207, 1251, 1268, 1443, 1522
FauNDI	CATATG	1 cut(s)	1170
FblI	GTMKAC	2 cut(s)	555, 1279
Fnu4HI	GCNGC	5 cut(s)	202, 215, 249, 252, 1437
FokI	GGATG	5 cut(s)	446, 1082, 1352, 1445, 1466
Fsp4HI	GCNGC	5 cut(s)	202, 215, 249, 252, 1437
FspBI	CTAG	3 cut(s)	321, 798, 954
GlaI	GCGC	1 cut(s)	247
GluI	GCNGC	5 cut(s)	202, 215, 249, 252, 1437
GsuI	CTGGAG	1 cut(s)	961
HaeII	RGCGCY	1 cut(s)	249
HaeIII	GGCC	2 cut(s)	236, 601
HapII	CCGG	3 cut(s)	105, 336, 938
HgaI	GACGC	2 cut(s)	701, 992
HhaI	GCGC	1 cut(s)	248
Hin1I	GRCGYC	1 cut(s)	246
Hin1II	CATG	8 cut(s)	773, 1049, 1083, 1211, 1255, 1272, 1447, 1526
Hin6I	GCGC	1 cut(s)	246
HinP1I	GCGC	1 cut(s)	246
HindIII	AAGCTT	2 cut(s)	1241, 1256
HinfI	GANTC	4 cut(s)	18, 149, 209, 317
HpaII	CCGG	3 cut(s)	105, 336, 938
HphI	GGTGA	5 cut(s)	130, 281, 902, 1048, 1321
Hpy166II	GTNNAC	5 cut(s)	556, 752, 1091, 1249, 1280
Hpy188I	TCNGA	4 cut(s)	57, 487, 594, 1557
Hpy188III	TCNNGA	4 cut(s)	15, 530, 576, 978
Hpy8I	GTNNAC	5 cut(s)	556, 752, 1091, 1249, 1280
Hpy99I	CGWCG	2 cut(s)	38, 41
HpyAV	CCTTC	4 cut(s)	94, 407, 413, 872
HpyCH4III	ACNGT	5 cut(s)	886, 1277, 1391, 1450, 1499
HpyCH4IV	ACGT	3 cut(s)	117, 754, 1027
HpyF10VI	GCNNNNNNNGC	3 cut(s)	257, 391, 821
HpyF3I	CTNAG	5 cut(s)	486, 491, 1064, 1130, 1239
HpySE526I	ACGT	3 cut(s)	117, 754, 1027
Hsp92I	GRCGYC	1 cut(s)	246
Hsp92II	CATG	8 cut(s)	773, 1049, 1083, 1211, 1255, 1272, 1447, 1526
HspAI	GCGC	1 cut(s)	246
KasI	GGCGCC	1 cut(s)	245
Kzo9I	GATC	3 cut(s)	589, 1215, 1305
LmnI	GCTCC	3 cut(s)	338, 516, 1229
Lsp1109I	GCAGC	4 cut(s)	201, 213, 238, 1448
LweI	GCATC	4 cut(s)	859, 1105, 1330, 1423
MaeI	CTAG	3 cut(s)	321, 798, 954
MaeII	ACGT	3 cut(s)	117, 754, 1027
MaeIII	GTNAC	3 cut(s)	1327, 1499, 1510
MalI	GATC	3 cut(s)	591, 1217, 1307
MboI	GATC	3 cut(s)	589, 1215, 1305
MboII	GAAGA	7 cut(s)	206, 422, 512, 689, 725, 772, 1455
MfeI	CAATTG	1 cut(s)	1547
MflI	RGATCY	1 cut(s)	1215
MhlI	GDGCHC	2 cut(s)	464, 864
MluCI	AATT	8 cut(s)	307, 423, 579, 807, 1365, 1526, 1547, 1558
Mly113I	GGCGCC	1 cut(s)	246
MlyI	GAGTC	2 cut(s)	143, 326
Mph1103I	ATGCAT	1 cut(s)	874
MroXI	GAANNNNTTC	2 cut(s)	117, 1462
MseI	TTAA	4 cut(s)	330, 726, 1122, 1190
MslI	CAYNNNNRTG	2 cut(s)	519, 1026
MspA1I	CMGCKG	1 cut(s)	251
MspI	CCGG	3 cut(s)	105, 336, 938
MspR9I	CCNGG	6 cut(s)	170, 336, 939, 1095, 1356, 1517
MunI	CAATTG	1 cut(s)	1547
Mva1269I	GAATGC	1 cut(s)	1263
MvaI	CCWGG	4 cut(s)	170, 1095, 1356, 1517
MvnI	CGCG	1 cut(s)	636
MwoI	GCNNNNNNNGC	3 cut(s)	257, 391, 821
NarI	GGCGCC	1 cut(s)	246
NciI	CCSGG	2 cut(s)	336, 939
NcoI	CCATGG	1 cut(s)	1268
NdeI	CATATG	1 cut(s)	1170
NdeII	GATC	3 cut(s)	589, 1215, 1305
NlaIII	CATG	8 cut(s)	773, 1049, 1083, 1211, 1255, 1272, 1447, 1526
NlaIV	GGNNCC	4 cut(s)	247, 340, 600, 1360
NmuCI	GTSAC	1 cut(s)	1327
NsiI	ATGCAT	1 cut(s)	874
NspI	RCATGY	1 cut(s)	773
PaeI	GCATGC	1 cut(s)	773
PaeR7I	CTCGAG	1 cut(s)	603
PaqCI	CACCTGC	1 cut(s)	1340
PcsI	WCGNNNNNNNCGW	1 cut(s)	861
PctI	GAATGC	1 cut(s)	1263
PdmI	GAANNNNTTC	2 cut(s)	117, 1462
PfeI	GAWTC	2 cut(s)	18, 209
PfoI	TCCNGGA	1 cut(s)	937
PkrI	GCNGC	5 cut(s)	203, 216, 250, 253, 1438
PleI	GAGTC	2 cut(s)	143, 325
PluTI	GGCGCC	1 cut(s)	249
PpsI	GAGTC	2 cut(s)	143, 325
Ppu21I	YACGTR	1 cut(s)	755
PsiI	TTATAA	1 cut(s)	671
Psp1406I	AACGTT	1 cut(s)	117
Psp6I	CCWGG	4 cut(s)	168, 1093, 1354, 1515
PspEI	GGTNACC	1 cut(s)	1510
PspGI	CCWGG	4 cut(s)	168, 1093, 1354, 1515
PspN4I	GGNNCC	4 cut(s)	247, 340, 600, 1360
PspPI	GGNCC	4 cut(s)	234, 599, 749, 1174
PspXI	VCTCGAGB	1 cut(s)	603
PstNI	CAGNNNCTG	1 cut(s)	1016
PsuI	RGATCY	1 cut(s)	1215
RsaI	GTAC	2 cut(s)	1092, 1290
RsaNI	GTAC	2 cut(s)	1091, 1289
RseI	CAYNNNNRTG	2 cut(s)	519, 1026
SaqAI	TTAA	4 cut(s)	330, 726, 1122, 1190
SatI	GCNGC	5 cut(s)	202, 215, 249, 252, 1437
Sau3AI	GATC	3 cut(s)	589, 1215, 1305
Sau96I	GGNCC	4 cut(s)	234, 599, 749, 1174
SchI	GAGTC	2 cut(s)	143, 326
ScrFI	CCNGG	6 cut(s)	170, 336, 939, 1095, 1356, 1517
SduI	GDGCHC	2 cut(s)	464, 864
SfaNI	GCATC	4 cut(s)	859, 1105, 1330, 1423
SfcI	CTRYAG	1 cut(s)	552
SfoI	GGCGCC	1 cut(s)	247
Sfr274I	CTCGAG	1 cut(s)	603
SinI	GGWCC	2 cut(s)	749, 1174
SlaI	CTCGAG	1 cut(s)	603
SmiMI	CAYNNNNRTG	2 cut(s)	519, 1026
SmlI	CTYRAG	1 cut(s)	603
SmoI	CTYRAG	1 cut(s)	603
SphI	GCATGC	1 cut(s)	773
Sse9I	AATT	8 cut(s)	307, 423, 579, 807, 1365, 1526, 1547, 1558
SsiI	CCGC	6 cut(s)	66, 128, 249, 304, 636, 1382
SspDI	GGCGCC	1 cut(s)	245
SspI	AATATT	1 cut(s)	1312
SspMI	CTAG	3 cut(s)	321, 798, 954
StyD4I	CCNGG	6 cut(s)	168, 334, 937, 1093, 1354, 1515
StyI	CCWWGG	1 cut(s)	1268
TaaI	ACNGT	5 cut(s)	886, 1277, 1391, 1450, 1499
TaiI	ACGT	3 cut(s)	120, 757, 1030
TaqI	TCGA	8 cut(s)	192, 228, 311, 547, 604, 855, 864, 1108
TasI	AATT	8 cut(s)	307, 423, 579, 807, 1365, 1526, 1547, 1558
TauI	GCSGC	1 cut(s)	251
TfiI	GAWTC	2 cut(s)	18, 209
Tru1I	TTAA	4 cut(s)	330, 726, 1122, 1190
Tru9I	TTAA	4 cut(s)	330, 726, 1122, 1190
TscAI	CASTG	2 cut(s)	464, 1355
TseFI	GTSAC	1 cut(s)	1327
TseI	GCWGC	4 cut(s)	201, 214, 251, 1436
Tsp45I	GTSAC	1 cut(s)	1327
TspDTI	ATGAA	6 cut(s)	450, 513, 1157, 1268, 1460, 1539
TspGWI	ACGGA	1 cut(s)	941
TspRI	CASTG	2 cut(s)	464, 1355
VpaK11BI	GGWCC	2 cut(s)	749, 1174
XapI	RAATTY	1 cut(s)	307
XceI	RCATGY	1 cut(s)	773
XhoI	CTCGAG	1 cut(s)	603
XmiI	GTMKAC	2 cut(s)	555, 1279
XmnI	GAANNNNTTC	2 cut(s)	117, 1462
XspI	CTAG	3 cut(s)	321, 798, 954
Zsp2I	ATGCAT	1 cut(s)	874

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.