Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0004493

Physical Location & Seq

Genomic Coordinates Forward (+)

7757294 .. 7764796

Gene Structure 7503 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5094 bp

ATGAAGCAGCAGCAGAGCTCATCATCGTCCGAGGCGGTATCGTCGTCGTCGTCGTCCTCCTCCTCCTCCGCCGCATCCACTTCGGCGGACCATTCGCAGCCCGCCACCTCATCGCCGAATTCGGGAGCCTCCGAAAAGCTTCCGTCGATACCGGCGGCGGCGCTGGAGGACCTTTCCGTGGGGTCCAGGGACGGCGGGGGGGCACAGGAGAGCGTGACCGTCGATCGGCGGGGCGAGTACTCGACGGTCTGCCGATGGACGGTCCAGAATTTTCCGAGAATCAAGGCTAGGGCACTGTGGAGCAAGTACTTCGAGGTAGGGGGATACGATTGCCGGTTGCTAATATACCCTAAGGGTGACTCACAGGCGCTGCCGGGGTACATCTCGATATACCTCCAAATCATGGACCCGCGGGGCACCTCGTCGTCCAAATGGGACTGTTTCGCGAGTTATCGGCTCGCCATCGTCAACCTCGCCGACGATTCTAAGACCATTCATCGCGATTCTTGGCATCGGTTCTCGAGCAAGAAGAAATCTCACGGTTGGTGCGATTTTACGCCTTCTTCTACTGTCTTTGATTCGAAATTAGGTTATTTGTTCAATACCGACTCCGTTTTGATTACCGCCGACATCTTGATATTGAATGAGTCCGTTAATTTTACGCGAGATAGTAATAACAATAACAATGAGCTCCAATCGTCCACCGGCTCGATGATGTCAGGTTCTGCGGTGGCCGGACCGGTTTCTGATGTGTTGAGTGGCAAGTTCACTTGGAAAGTTCAAAACTTTAGTTTGTTTAAGGAGATGATTAAGACTCAGAAGATAATGAGCCCGGTGTTTCCTGCTGGAGAGTGTAATTTGAGGATTAGTGTGTACCAGAGCTCGGTGAACGGCGTGGAGTTTTTGTCAATGTGTTTGGAGAGCAAGGACACGGACAAGACGGTTGTGTTGTCTGATAGGAGTTGTTGGTGTTTGTTTCGAATGTCGGTGTTGAACCAGAAGCCTGGGACTAATCACATGCATAGGGACTCGTATGGGAGGTTTGCTGCTGATAATAAGAGTGGGGATAACACTAGTTTGGGGTGGAATGATTATATGAAGATGTCGGATTTTGTTGGGACTGAGTCGGGGTTTTTATTGGATGATACTGCGGTGTTTAGTACATCGTTTCATGTGATAAAGGAATTTAGTAGCTTTTCGAAGAATGGAGGATTAATTATGGGGAGGAGTGGTAGTGGGGCAAGGAAGTTGGATGGTCACATGGGGAAATTCAATTGGAGGATTGACAACTTCACTAGGTTGAAGGATCTTTTAAAGAAGAGGAAGATAACGGGTCTTTGCATCAAGAGCAGGAGGTTTCAGATTGGAAATCGGGACTGTCGGCTCATTGTTTATCCCCGAGGGCAGTCTCAACCACCATGCCACCTTTCAGTGTTTCTGGAAGTTACTGATTCACGGAACACTTCTAGTGACTGGAGTTGTTTTGTGAGCCATCGTTTGTCTGTTGTTAACCAGAGGATGGAGGAGAAGTCTGTCACGAAGGAGTCTCAGAATCGCTACTCCAAAGCTGCAAAGGACTGGGGCTGGCGTGAATTTGTGACGCTTACTAGTCTCTTTGATCAAGATTCAGGGTTTCTTATTCTGGACACTGTTGTATTCTCAGCGGAGGTCCTTATATTGAAAGAGACATCAATAATGCAAGAGTTTACCGATCAGGATACTGAGTCAAGCAATGCTGGTTCGCAGATTGATAAGAACGGAAAAAGAAGTTCCTTCACATGGAAGGTGGAGAATTTCCTGTCTTTTAAGGAAATAATGGAGACCCGAAAAATCTTTAGCAAATTCTTCCAAGCTGGTGGATGTGAACTTCGAATTGGTGTATATGAGTCCTTTGACACCATATGTATTTATTTGGAGAGTGACCAGTCAGTTGGTAGTGATCTGGATAAAAACTTTTGGGTTAGATACAGGATGGCTGTTGTGAATCAAAAGAACCCTGCTAAAACTGTGTGGAAGGAGTCATCTATATGTACAAAGACTTGGAACAATTCTGTTTTACAATTCATGAAGGTGTCGGATATGTTGGAAGCAGATGCAGGGTTTCTTGTTCGTGATACTGTTGTTTTTGTTTGCGAAATATTGGACTGCTGTCCTTGGTTTGAGTTTTCAGATCTCGAGGTTTTTGCTTCGGAGGATGATCAGGATGCATTGACAACAGATCCTGATGAGCTTGTTGATTCTGAAGACAGTGAAGGAATTGGTGGTGATGAAGAAGATATCTTTAGAAACCTATTTTCTAGAGCTGGATTTCACCTCACATACGGAGATAATCCTTCACAGCCACAGGTCACTTTACGAGAAAAACTTCTGATGGATGCTGGTGCTATTGCTGGTTTTCTGACTGGGCTCCGTGTTTATCTTGATGACCCTGCTAAAGTAAAACGCCTGCTTCTTCCGACCAAGCTTTCTGGTAGCAGTGATGGGATGAAGGTCAAAAAGAATGATGAATCTTCCCCTAGTTTGATGAATTTGCTTATGGGAGTCAAAGTTCTGCAGCAGGCTATCATTGATTTACTTTTGGACATTATGGTTGAGTGTTGCCAACCTACAAAAGGGACTTCTAATGGTGACTTGTCTGATACAAACTCAAAGTCTCCAGATGGAAGCGGAGCTGCTAGTCCGTTGCAACCCGATAGAGAAAATGGAGCTACAGAATCTGTATGTGAAAGATTGGATACTGGCGCTGATGAAACTAGCAGCAGCTCTTCGGCTGTTCAAAGCTCTGACGTGACTGGGATTGGTGTACCTAGAAAAACTGTTCCTGGAAAACCAATTTGTCCTCCAGAAACATCCGCCGGGGTGTTGGAAAATGTGACCCTTCGCTCAAAGACCAAGTGGCCAGAGCAATCAGAGGAGCTCTTAGGATTGATTGTAAACTCGTTGCGAGCTCTAGATGGAGCTGTTCCACAAGGCTGTCCTGAACCAAGACGTCGGCCTCAGTCGGCACAAAAGATCGCTCTTGTACTGGATAAAGCGCCAAAGCATTTGCAGTCTGATCTTGTTGCTTTGGTGCCCAAGTTGGTTGAGCACTCAGAGCATCCACTTGCTGCTTTTGCACTTATAGAACGACTTCAAAAGCCAGATGCAGAACCTGCTTTGCGGACACCTGTTTTTGGTGCTCTGAGTCAACTGGACTGTGGCAGTGAAGTGTGGGAACGAGTTTTATCTCAATCTTTTGAGTTTTTGCTGGATTCAAATGATGAGCCTCTTGTTGCAACCATAGATTTTATATTTAAAGCTGCATCCCAGTGCCAACACCTCCCCGAAGCCGTCAGATCTGTCCGTGTTAGGCTAAAGAATTTGGGTGTCAACATTTCTCCTTGTGTTCTTGAATTTTTGAGTAGAACTGTAAATAGCTGGGGAGATGTTGCTGAAACCATACTTAGAGATATTGATTGTGATGATGAATTTAGTGACACTTGCTCGACATTGAATTCTGGTCTTTTCTTGTTTGGTGAACATGGACCGATTTCTGAACGGTTTCATCCGGTGGATGAGCAGGCTTTCCGCTCGAGTTGTCTCTTTTCTGACATTTACATCTTGATTGAGATGTTATCCATACCTTGTTTGGCAGTTGAAGCCTCTCAAACATTTGAGAGAGCTGTAGCTCGTGGTGCCATTGTGGCTCATTCTGTGGCCATGGTTTTGGAAAGGCGCCTTGCTCAAAGATTGAATCTTGATGGTAGATTTGTTGGGGATAATTTTCAGCGGACCGATGTTGCAGCAGAGGGAGATGCCAATGAACAGCTGAGAGTCCAACGAGACGATTTTACTTCAGTTCTTGGTCTTGCTGAGGCATTGGCCCTCTCTAGAGATCCTTGTGTTAAGGGATTTGTGAAGATGCTGTATACATTATTATTGAAATGGTATGCTGACGAGACTTATCGAGGGAGAATGCTGAAGAGACTTGTAGATCGAGCCACTAGCACTACAGATAGTAACCGTGAAGTTGATCTAGATTTGGATATCTTGGTGATGCTGGCTTCTGAAGAACAAGAAATTATCAGACCAGTTTTGAGTATGATGCGGGAGGTTGCTGAACTTGCAAATGTTGATCGTGCTGCTCTGTGGCACCAGTTATGTGCTAGTGAAGATGAAATAATTCACATGCGTGAAGAAAAGAAAGCCGAAAATGCTACTATGGTTAAAGAAAAAGCTGTTATATCGCAAAAACTGAGTGAATCTGAGGCCACTAACACTCGTCTTAAGTCTGAAATGAAGGCTGAGATTGATCGCTTTGCTCGAGAAAAGAAGGAACTATCCGAACAAATACAAGAAGTTGAGAGTCAGCTTGAGTGGCACCGCTCTGAGCGAGATGATGAAATCAGAAAGCTCACTACAGAGAGGAAAGTGCTTCAGGATCGCCTTCATGATGCAGAGACACAACTATCTCAATTGAAGTCCCGAAAACGTGATGAATTGAAGAAATTGGTGAAGGAGAAAAATGCTCTTGCTGAAAGGTTGAAGAGCGCTGAAGGCGCACGTAAAAGATTTGATGAAGAACTTAAACGGTATGCCACAGAGAATGTAACCCGAGAGGAAATTCGACAGTCTCTCGAAGATGAAGTACGGCGATTGACACAAACAGTGGGGCAAACAGAAGGAGAGAAACGGGAGAAAGAAGAGCAGGTTGCTCTGTGTGAGGCGTATATTGATGGGATGGAATCAAAATTGCAGGCCTGCCAGCAATATATTCACACCCTCGAGGCATCACTTCAGGAAGAAATGTCCCGACATGCTCCTCTGTATGGGGCGGGTTTGGAAGCTCTATCAATGAAGGAGTTGGAAACACTTTCACGCATCCATGAAGAAGGCCTCAGGCAGATCCATACCCTTCAGCAGCAGCGTAAAGGCAGTCCATCCGGCAGTCCTCTTGTGAGCCCTCACGCCCTCCAACACAATCATGGCTTATATCCTTCAACGCCACCCCAGATGGCCGTTGGAATGCCTCCTTCGCTCATCCCAAATGGTGTCGGAATCCACAGCAATGGGCATGTGAATGGTAATGTTGGACCATGGTTCAACCATTCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004843 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006508 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009506 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009987 GO:0010033 GO:0016787 GO:0019538 GO:0019783 GO:0023052 GO:0030054 GO:0032870 GO:0036459 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070011 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0101005 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FancD2 MATH

Protein Analysis

1698

Amino Acids

189.34

Weight (kDa)

5.44

Isoelectric Point (pI)

45.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MATH_2	PF22486	85 - 211	4.7e-20	MATH domain
MATH	PF00917	89 - 213	1.5e-07	MATH domain
MATH_2	PF22486	255 - 387	2.3e-18	MATH domain
MATH_2	PF22486	423 - 557	9.8e-28	MATH domain
MATH	PF00917	453 - 559	1.4e-08	MATH domain
MATH_2	PF22486	591 - 713	5e-13	MATH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25320 AT2G25320 AT2G25320
fragaria_vesca	FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850
malus_domestica	MD08G1156500.v1.1 MD15G1127100.v1.1
prunus_persica	Prupe.1G482800_v2.0.a1 Prupe.1G482800_v2.0.a1 Prupe.1G482800_v2.0.a1
pyrus_communis	pycom08g12870 pycom15g11460
rosa_chinensis	RchiOBHm_Chr6g0297611
rosa_laevigata	RLG00000011577
rosa_multiflora	Rmu_ssc0000319.1_g000010
rosa_roxburghii	Rroxscaffold_7G00170320
rosa_rugosa	Rorug06G0274300 Rorug06G0274400.1 Rorug06G0274500 Rorug06G0274600
rosa_samantha	Rh6AG385100 Rh6BG393200 Rh6CG399000 Rh6DG385600
rosa_wichuraiana	Rw6G033550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2992
AbsI	CCTCGAGG	1 cut(s)	4763
Acc36I	ACCTGC	2 cut(s)	3160, 4678
AccB1I	GGYRCC	6 cut(s)	416, 3070, 3674, 3714, 4131, 4359
AccB7I	CCANNNNNTGG	2 cut(s)	403, 1519
AccBSI	CCGCTC	2 cut(s)	3570, 4365
AccI	GTMKAC	1 cut(s)	3908
AccII	CGCG	4 cut(s)	412, 446, 501, 664
AclWI	GGATC	5 cut(s)	1314, 2213, 3869, 4428, 4879
AcoI	YGGCCR	4 cut(s)	732, 2897, 3696, 4995
AcuI	CTGAAG	8 cut(s)	2262, 3819, 3980, 4068, 4400, 4554, 4760, 4880
AcyI	GRCGYC	2 cut(s)	2989, 3715
AfaI	GTAC	9 cut(s)	239, 308, 380, 875, 1162, 2032, 2805, 3024, 4629
AfeI	AGCGCT	1 cut(s)	4531
AflII	CTTAAG	1 cut(s)	4265
AgeI	ACCGGT	1 cut(s)	739
AhlI	ACTAGT	2 cut(s)	1073, 1607
AjiI	CACGTC	1 cut(s)	2788
AjnI	CCWGG	3 cut(s)	185, 1003, 2821
AjuI	GAANNNNNNNTTGG	2 cut(s)	1857, 1889
AleI	CACNNNNGTG	1 cut(s)	4170
AloI	GAACNNNNNNTCC	2 cut(s)	2532, 2564
Alw21I	GWGCWC	7 cut(s)	20, 693, 884, 2919, 2950, 3090, 3181
AlwI	GGATC	5 cut(s)	1314, 2213, 3869, 4428, 4879
AlwNI	CAGNNNCTG	5 cut(s)	370, 725, 2222, 2717, 3152
Ama87I	CYCGRG	7 cut(s)	520, 1398, 2174, 3571, 4302, 4593, 4763
Aor51HI	AGCGCT	1 cut(s)	4531
AoxI	GGCC	9 cut(s)	732, 2897, 2993, 3696, 3861, 4248, 4737, 4873, 4995
ArsI	GACNNNNNNTTYG	2 cut(s)	2636, 2668
AseI	ATTAAT	1 cut(s)	1214
AsiGI	ACCGGT	1 cut(s)	739
Asp700I	GAANNNNTTC	5 cut(s)	138, 2364, 3129, 3540, 4161
AspLEI	GCGC	7 cut(s)	163, 370, 2744, 3037, 3717, 4532, 4541
AsuC2I	CCSGG	3 cut(s)	375, 833, 2857
AsuHPI	GGTGA	8 cut(s)	368, 898, 2276, 2303, 2639, 3527, 4045, 4504
AsuII	TTCGAA	4 cut(s)	581, 979, 1199, 1870
AvaI	CYCGRG	7 cut(s)	520, 1398, 2174, 3571, 4302, 4593, 4763
AxyI	CCTNAGG	2 cut(s)	351, 4877
BaeGI	GKGCMC	4 cut(s)	205, 295, 419, 3075
BaeI	ACNNNNGTAYC	4 cut(s)	1137, 1170, 2106, 2139
BalI	TGGCCA	2 cut(s)	2899, 3698
BanI	GGYRCC	6 cut(s)	416, 3070, 3674, 3714, 4131, 4359
BanII	GRGCYC	8 cut(s)	20, 693, 833, 884, 2409, 2919, 2950, 4943
BarI	GAAGNNNNNNTAC	2 cut(s)	4611, 4643
BauI	CACGAG	1 cut(s)	3669
BbsI	GAAGAC	1 cut(s)	2250
Bbv12I	GWGCWC	7 cut(s)	20, 693, 884, 2919, 2950, 3090, 3181
BbvCI	CCTCAGC	1 cut(s)	3852
BceAI	ACGGC	5 cut(s)	208, 907, 3314, 4646, 4982
BcgI	CGANNNNNNTGC	6 cut(s)	63, 97, 292, 326, 2165, 2199
BciT130I	CCWGG	3 cut(s)	187, 1005, 2823
BciVI	GTATCC	3 cut(s)	317, 1711, 2728
BclI	TGATCA	2 cut(s)	1618, 2197
BcnI	CCSGG	3 cut(s)	375, 833, 2857
BcuI	ACTAGT	2 cut(s)	1073, 1607
BfmI	CTRYAG	5 cut(s)	2552, 2709, 3663, 3990, 4398
BfoI	RGCGCY	6 cut(s)	164, 371, 2745, 3038, 3718, 4533
BfrI	CTTAAG	1 cut(s)	4265
BfuAI	ACCTGC	2 cut(s)	3160, 4678
BfuI	GTATCC	3 cut(s)	317, 1711, 2728
BglI	GCCNNNNNGGC	1 cut(s)	3683
BglII	AGATCT	2 cut(s)	2170, 3335
BmcAI	AGTACT	2 cut(s)	239, 308
Bme1390I	CCNGG	6 cut(s)	187, 375, 833, 1005, 2823, 2857
BmeT110I	CYCGRG	7 cut(s)	520, 1398, 2174, 3571, 4302, 4593, 4763
BmgBI	CACGTC	1 cut(s)	2788
BmrFI	CCNGG	6 cut(s)	187, 375, 833, 1005, 2823, 2857
BmrI	ACTGGG	4 cut(s)	1588, 2412, 2802, 3301
BmuI	ACTGGG	4 cut(s)	1588, 2412, 2802, 3301
BoxI	GACNNNNGTC	1 cut(s)	2148
BpiI	GAAGAC	1 cut(s)	2250
BpmI	CTGGAG	5 cut(s)	185, 867, 1495, 2640, 2826
Bpu10I	CCTNAGC	1 cut(s)	3852
Bpu14I	TTCGAA	4 cut(s)	581, 979, 1199, 1870
BpuEI	CTTGAG	1 cut(s)	4373
BpuMI	CCSGG	3 cut(s)	375, 833, 2857
BsaAI	YACGTR	1 cut(s)	4544
BsaHI	GRCGYC	2 cut(s)	2989, 3715
BsaI	GGTCTC	1 cut(s)	1814
BsaWI	WCCGGW	2 cut(s)	739, 3547
Bse118I	RCCGGY	4 cut(s)	151, 333, 704, 739
Bse21I	CCTNAGG	2 cut(s)	351, 4877
Bse3DI	GCAATG	2 cut(s)	1738, 5053
BseBI	CCWGG	3 cut(s)	187, 1005, 2823
BseMI	GCAATG	2 cut(s)	1738, 5053
BseRI	GAGGAG	7 cut(s)	49, 52, 55, 1240, 1538, 2927, 4791
BseSI	GKGCMC	4 cut(s)	205, 295, 419, 3075
BseYI	CCCAGC	1 cut(s)	3417
Bsh1236I	CGCG	4 cut(s)	412, 446, 501, 664
Bsh1285I	CGRYCG	1 cut(s)	226
BshFI	GGCC	9 cut(s)	734, 2899, 2995, 3698, 3863, 4250, 4739, 4875, 4997
BshNI	GGYRCC	6 cut(s)	416, 3070, 3674, 3714, 4131, 4359
BshTI	ACCGGT	1 cut(s)	739
BsiEI	CGRYCG	1 cut(s)	226
BsiHKAI	GWGCWC	7 cut(s)	20, 693, 884, 2919, 2950, 3090, 3181
BsiHKCI	CYCGRG	7 cut(s)	520, 1398, 2174, 3571, 4302, 4593, 4763
BslFI	GGGAC	9 cut(s)	203, 449, 1021, 1040, 1132, 1388, 2629, 4447, 4774
BsmBI	CGTCTC	1 cut(s)	3816
BsmFI	GGGAC	9 cut(s)	203, 449, 1021, 1040, 1132, 1388, 2629, 4447, 4774
BsmI	GAATGC	2 cut(s)	3960, 5010
BsnI	GGCC	9 cut(s)	734, 2899, 2995, 3698, 3863, 4250, 4739, 4875, 4997
Bso31I	GGTCTC	1 cut(s)	1814
BsoBI	CYCGRG	7 cut(s)	520, 1398, 2174, 3571, 4302, 4593, 4763
Bsp119I	TTCGAA	4 cut(s)	581, 979, 1199, 1870
Bsp1407I	TGTACA	1 cut(s)	2030
Bsp19I	CCATGG	2 cut(s)	3699, 5075
Bsp68I	TCGCGA	2 cut(s)	446, 501
BspANI	GGCC	9 cut(s)	734, 2899, 2995, 3698, 3863, 4250, 4739, 4875, 4997
BspFNI	CGCG	4 cut(s)	412, 446, 501, 664
BspHI	TCATGA	2 cut(s)	2064, 4429
BspMAI	CTGCAG	1 cut(s)	2556
BspMI	ACCTGC	2 cut(s)	3160, 4678
BspPI	GGATC	5 cut(s)	1314, 2213, 3869, 4428, 4879
BspQI	GCTCTTC	3 cut(s)	2770, 4520, 4677
BspT104I	TTCGAA	4 cut(s)	581, 979, 1199, 1870
BspT107I	GGYRCC	6 cut(s)	416, 3070, 3674, 3714, 4131, 4359
BspTI	CTTAAG	1 cut(s)	4265
BspTNI	GGTCTC	1 cut(s)	1814
BsrBI	CCGCTC	2 cut(s)	3570, 4365
BsrDI	GCAATG	2 cut(s)	1738, 5053
BsrFI	RCCGGY	4 cut(s)	151, 333, 704, 739
BsrGI	TGTACA	1 cut(s)	2030
BssAI	RCCGGY	4 cut(s)	151, 333, 704, 739
BssNAI	GTATAC	1 cut(s)	3909
BssNI	GRCGYC	2 cut(s)	2989, 3715
BssSI	CACGAG	1 cut(s)	3669
BssT1I	CCWWGG	3 cut(s)	2153, 3699, 5075
Bst1107I	GTATAC	1 cut(s)	3909
Bst2BI	CACGAG	1 cut(s)	3669
Bst2UI	CCWGG	3 cut(s)	187, 1005, 2823
Bst6I	CTCTTC	5 cut(s)	1313, 2770, 3956, 4520, 4677
BstACI	GRCGYC	2 cut(s)	2989, 3715
BstAFI	CTTAAG	1 cut(s)	4265
BstAPI	GCANNNNNTGC	1 cut(s)	3152
BstAUI	TGTACA	1 cut(s)	2030
BstBAI	YACGTR	1 cut(s)	4544
BstBI	TTCGAA	4 cut(s)	581, 979, 1199, 1870
BstDSI	CCRYGG	4 cut(s)	177, 410, 3699, 5075
BstENI	CCTNNNNNAGG	1 cut(s)	2610
BstFNI	CGCG	4 cut(s)	412, 446, 501, 664
BstH2I	RGCGCY	6 cut(s)	164, 371, 2745, 3038, 3718, 4533
BstHHI	GCGC	7 cut(s)	163, 370, 2744, 3037, 3717, 4532, 4541
BstMCI	CGRYCG	1 cut(s)	226
BstNI	CCWGG	3 cut(s)	187, 1005, 2823
BstNSI	RCATGY	4 cut(s)	1021, 4171, 4799, 5057
BstPAI	GACNNNNGTC	1 cut(s)	2148
BstSCI	CCNGG	6 cut(s)	185, 373, 831, 1003, 2821, 2855
BstSFI	CTRYAG	5 cut(s)	2552, 2709, 3663, 3990, 4398
BstSLI	GKGCMC	4 cut(s)	205, 295, 419, 3075
BstUI	CGCG	4 cut(s)	412, 446, 501, 664
BstV2I	GAAGAC	1 cut(s)	2250
BstX2I	RGATCY	6 cut(s)	1306, 2170, 2218, 3335, 3874, 4884
BstXI	CCANNNNNNTGG	5 cut(s)	1004, 1856, 1931, 3706, 5048
BstYI	RGATCY	6 cut(s)	1306, 2170, 2218, 3335, 3874, 4884
BstZ17I	GTATAC	1 cut(s)	3909
Bsu36I	CCTNAGG	2 cut(s)	351, 4877
BsuI	GTATCC	3 cut(s)	317, 1711, 2728
BsuRI	GGCC	9 cut(s)	734, 2899, 2995, 3698, 3863, 4250, 4739, 4875, 4997
BtgI	CCRYGG	4 cut(s)	177, 410, 3699, 5075
BtgZI	GCGATG	2 cut(s)	96, 482
BtrI	CACGTC	1 cut(s)	2788
BtsI	GCAGTG	2 cut(s)	2482, 3208
BtsIMutI	CAGTG	8 cut(s)	293, 1437, 1647, 2254, 2482, 3208, 3314, 4653
BtuMI	TCGCGA	2 cut(s)	446, 501
BveI	ACCTGC	2 cut(s)	3160, 4678
CaiI	CAGNNNCTG	5 cut(s)	370, 725, 2222, 2717, 3152
CciI	TCATGA	2 cut(s)	2064, 4429
CfoI	GCGC	7 cut(s)	163, 370, 2744, 3037, 3717, 4532, 4541
Cfr10I	RCCGGY	4 cut(s)	151, 333, 704, 739
Cfr42I	CCGCGG	1 cut(s)	413
CpoI	CGGWCCG	2 cut(s)	737, 3771
CseI	GACGC	1 cut(s)	1609
Csp6I	GTAC	9 cut(s)	238, 307, 379, 874, 1161, 2031, 2804, 3023, 4628
CspAI	ACCGGT	1 cut(s)	739
CspI	CGGWCCG	2 cut(s)	737, 3771
CviQI	GTAC	9 cut(s)	238, 307, 379, 874, 1161, 2031, 2804, 3023, 4628
DinI	GGCGCC	1 cut(s)	3716
DraI	TTTAAA	2 cut(s)	1314, 3295
EaeI	YGGCCR	4 cut(s)	732, 2897, 3696, 4995
Eam1104I	CTCTTC	5 cut(s)	1313, 2770, 3956, 4520, 4677
EarI	CTCTTC	5 cut(s)	1313, 2770, 3956, 4520, 4677
EciI	GGCGGA	3 cut(s)	58, 101, 2842
Ecl136II	GAGCTC	5 cut(s)	18, 691, 882, 2917, 2948
Eco130I	CCWWGG	3 cut(s)	2153, 3699, 5075
Eco147I	AGGCCT	2 cut(s)	4739, 4875
Eco24I	GRGCYC	8 cut(s)	20, 693, 833, 884, 2409, 2919, 2950, 4943
Eco31I	GGTCTC	1 cut(s)	1814
Eco32I	GATATC	2 cut(s)	2278, 4027
Eco47III	AGCGCT	1 cut(s)	4531
Eco53kI	GAGCTC	5 cut(s)	18, 691, 882, 2917, 2948
Eco57I	CTGAAG	8 cut(s)	2262, 3819, 3980, 4068, 4400, 4554, 4760, 4880
Eco81I	CCTNAGG	2 cut(s)	351, 4877
Eco88I	CYCGRG	7 cut(s)	520, 1398, 2174, 3571, 4302, 4593, 4763
EcoICRI	GAGCTC	5 cut(s)	18, 691, 882, 2917, 2948
EcoNI	CCTNNNNNAGG	1 cut(s)	2610
EcoO109I	RGGNCCY	2 cut(s)	169, 1669
EcoRI	GAATTC	2 cut(s)	118, 3493
EcoRII	CCWGG	3 cut(s)	185, 1003, 2821
EcoRV	GATATC	2 cut(s)	2278, 4027
EcoT14I	CCWWGG	3 cut(s)	2153, 3699, 5075
EcoT22I	ATGCAT	2 cut(s)	1023, 2209
EcoT38I	GRGCYC	8 cut(s)	20, 693, 833, 884, 2409, 2919, 2950, 4943
EgeI	GGCGCC	1 cut(s)	3716
EheI	GGCGCC	1 cut(s)	3716
ErhI	CCWWGG	3 cut(s)	2153, 3699, 5075
Esp3I	CGTCTC	1 cut(s)	3816
FaqI	GGGAC	9 cut(s)	203, 449, 1021, 1040, 1132, 1388, 2629, 4447, 4774
FauI	CCCGC	7 cut(s)	109, 188, 222, 405, 417, 4080, 4807
FauNDI	CATATG	1 cut(s)	1901
FbaI	TGATCA	2 cut(s)	1618, 2197
FblI	GTMKAC	1 cut(s)	3908
FriOI	GRGCYC	8 cut(s)	20, 693, 833, 884, 2409, 2919, 2950, 4943
GlaI	GCGC	7 cut(s)	162, 369, 2743, 3036, 3716, 4531, 4540
GsaI	CCCAGC	1 cut(s)	3421
GsuI	CTGGAG	5 cut(s)	185, 867, 1495, 2640, 2826
HaeII	RGCGCY	6 cut(s)	164, 371, 2745, 3038, 3718, 4533
HaeIII	GGCC	9 cut(s)	734, 2899, 2995, 3698, 3863, 4250, 4739, 4875, 4997
HgaI	GACGC	1 cut(s)	1609
HhaI	GCGC	7 cut(s)	163, 370, 2744, 3037, 3717, 4532, 4541
Hin1I	GRCGYC	2 cut(s)	2989, 3715
Hin6I	GCGC	7 cut(s)	161, 368, 2742, 3035, 3715, 4530, 4539
HinP1I	GCGC	7 cut(s)	161, 368, 2742, 3035, 3715, 4530, 4539
HincII	GTYRAC	4 cut(s)	469, 1510, 3188, 3370
HindII	GTYRAC	4 cut(s)	469, 1510, 3188, 3370
HindIII	AAGCTT	2 cut(s)	137, 2462
HpaI	GTTAAC	1 cut(s)	1510
HphI	GGTGA	8 cut(s)	368, 898, 2276, 2303, 2639, 3527, 4045, 4504
HpyCH4IV	ACGT	4 cut(s)	2787, 2989, 4471, 4543
HpySE526I	ACGT	4 cut(s)	2787, 2989, 4471, 4543
Hsp92I	GRCGYC	2 cut(s)	2989, 3715
HspAI	GCGC	7 cut(s)	161, 368, 2742, 3035, 3715, 4530, 4539
KasI	GGCGCC	1 cut(s)	3714
Ksp22I	TGATCA	2 cut(s)	1618, 2197
KspAI	GTTAAC	1 cut(s)	1510
KspI	CCGCGG	1 cut(s)	413
LguI	GCTCTTC	3 cut(s)	2770, 4520, 4677
LmnI	GCTCC	9 cut(s)	125, 300, 696, 2412, 2669, 2705, 2914, 2957, 4804
MaeII	ACGT	4 cut(s)	2787, 2989, 4471, 4543
MbiI	CCGCTC	2 cut(s)	3570, 4365
MfeI	CAATTG	2 cut(s)	1273, 4454
MflI	RGATCY	6 cut(s)	1306, 2170, 2218, 3335, 3874, 4884
MlsI	TGGCCA	2 cut(s)	2899, 3698
MluNI	TGGCCA	2 cut(s)	2899, 3698
Mly113I	GGCGCC	1 cut(s)	3715
Mox20I	TGGCCA	2 cut(s)	2899, 3698
Mph1103I	ATGCAT	2 cut(s)	1023, 2209
MroXI	GAANNNNTTC	5 cut(s)	138, 2364, 3129, 3540, 4161
MscI	TGGCCA	2 cut(s)	2899, 3698
MslI	CAYNNNNRTG	7 cut(s)	2026, 2069, 3307, 4170, 4962, 5046, 5058
Msp20I	TGGCCA	2 cut(s)	2899, 3698
MspA1I	CMGCKG	4 cut(s)	412, 1664, 3769, 3808
MspCI	CTTAAG	1 cut(s)	4265
MspR9I	CCNGG	6 cut(s)	187, 375, 833, 1005, 2823, 2857
MunI	CAATTG	2 cut(s)	1273, 4454
Mva1269I	GAATGC	2 cut(s)	3960, 5010
MvaI	CCWGG	3 cut(s)	187, 1005, 2823
MvnI	CGCG	4 cut(s)	412, 446, 501, 664
NarI	GGCGCC	1 cut(s)	3715
NciI	CCSGG	3 cut(s)	375, 833, 2857
NcoI	CCATGG	2 cut(s)	3699, 5075
NdeI	CATATG	1 cut(s)	1901
NruI	TCGCGA	2 cut(s)	446, 501
NsiI	ATGCAT	2 cut(s)	1023, 2209
NspI	RCATGY	4 cut(s)	1021, 4171, 4799, 5057
NspV	TTCGAA	4 cut(s)	581, 979, 1199, 1870
OliI	CACNNNNGTG	1 cut(s)	4170
PaeR7I	CTCGAG	5 cut(s)	520, 2174, 3571, 4302, 4763
PagI	TCATGA	2 cut(s)	2064, 4429
PceI	AGGCCT	2 cut(s)	4739, 4875
PciSI	GCTCTTC	3 cut(s)	2770, 4520, 4677
PcsI	WCGNNNNNNNCGW	4 cut(s)	47, 50, 546, 4300
PctI	GAATGC	2 cut(s)	3960, 5010
PdmI	GAANNNNTTC	5 cut(s)	138, 2364, 3129, 3540, 4161
PflFI	GACNNNGTC	1 cut(s)	1123
PflMI	CCANNNNNTGG	2 cut(s)	403, 1519
PfoI	TCCNGGA	1 cut(s)	2821
PinAI	ACCGGT	1 cut(s)	739
Ple19I	CGATCG	1 cut(s)	226
PluTI	GGCGCC	1 cut(s)	3718
Ppu21I	YACGTR	1 cut(s)	4544
PpuMI	RGGWCCY	2 cut(s)	169, 1669
PshAI	GACNNNNGTC	1 cut(s)	2148
PshBI	ATTAAT	1 cut(s)	1214
Psp124BI	GAGCTC	5 cut(s)	20, 693, 884, 2919, 2950
Psp5II	RGGWCCY	2 cut(s)	169, 1669
Psp6I	CCWGG	3 cut(s)	185, 1003, 2821
PspFI	CCCAGC	1 cut(s)	3417
PspGI	CCWGG	3 cut(s)	185, 1003, 2821
PspPPI	RGGWCCY	2 cut(s)	169, 1669
PspXI	VCTCGAGB	2 cut(s)	3571, 4763
PstI	CTGCAG	1 cut(s)	2556
PstNI	CAGNNNCTG	5 cut(s)	370, 725, 2222, 2717, 3152
PsuI	RGATCY	6 cut(s)	1306, 2170, 2218, 3335, 3874, 4884
PsyI	GACNNNGTC	1 cut(s)	1123
PvuI	CGATCG	1 cut(s)	226
PvuII	CAGCTG	1 cut(s)	3808
RruI	TCGCGA	2 cut(s)	446, 501
RsaI	GTAC	9 cut(s)	239, 308, 380, 875, 1162, 2032, 2805, 3024, 4629
RsaNI	GTAC	9 cut(s)	238, 307, 379, 874, 1161, 2031, 2804, 3023, 4628
RseI	CAYNNNNRTG	7 cut(s)	2026, 2069, 3307, 4170, 4962, 5046, 5058
Rsr2I	CGGWCCG	2 cut(s)	737, 3771
RsrII	CGGWCCG	2 cut(s)	737, 3771
SacI	GAGCTC	5 cut(s)	20, 693, 884, 2919, 2950
SacII	CCGCGG	1 cut(s)	413
SapI	GCTCTTC	3 cut(s)	2770, 4520, 4677
ScaI	AGTACT	2 cut(s)	239, 308
ScrFI	CCNGG	6 cut(s)	187, 375, 833, 1005, 2823, 2857
SfcI	CTRYAG	5 cut(s)	2552, 2709, 3663, 3990, 4398
SfoI	GGCGCC	1 cut(s)	3716
Sfr274I	CTCGAG	5 cut(s)	520, 2174, 3571, 4302, 4763
Sfr303I	CCGCGG	1 cut(s)	413
SfuI	TTCGAA	4 cut(s)	581, 979, 1199, 1870
SgrBI	CCGCGG	1 cut(s)	413
SlaI	CTCGAG	5 cut(s)	520, 2174, 3571, 4302, 4763
SmiMI	CAYNNNNRTG	7 cut(s)	2026, 2069, 3307, 4170, 4962, 5046, 5058
SmlI	CTYRAG	7 cut(s)	520, 2174, 3571, 4265, 4302, 4352, 4763
SmoI	CTYRAG	7 cut(s)	520, 2174, 3571, 4265, 4302, 4352, 4763
SpeI	ACTAGT	2 cut(s)	1073, 1607
SseBI	AGGCCT	2 cut(s)	4739, 4875
SspDI	GGCGCC	1 cut(s)	3714
SspI	AATATT	1 cut(s)	2139
SstI	GAGCTC	5 cut(s)	20, 693, 884, 2919, 2950
StuI	AGGCCT	2 cut(s)	4739, 4875
StyD4I	CCNGG	6 cut(s)	185, 373, 831, 1003, 2821, 2855
StyI	CCWWGG	3 cut(s)	2153, 3699, 5075
TaiI	ACGT	4 cut(s)	2790, 2992, 4474, 4546
TaqII	GACCGA	2 cut(s)	3541, 3788
TatI	WGTACW	5 cut(s)	237, 306, 1160, 2030, 3022
TauI	GCSGC	3 cut(s)	74, 158, 161
TscAI	CASTG	8 cut(s)	300, 1437, 1654, 2254, 2482, 3208, 3314, 4653
TspRI	CASTG	8 cut(s)	300, 1437, 1654, 2254, 2482, 3208, 3314, 4653
Tth111I	GACNNNGTC	1 cut(s)	1123
Van91I	CCANNNNNTGG	2 cut(s)	403, 1519
Vha464I	CTTAAG	1 cut(s)	4265
VspI	ATTAAT	1 cut(s)	1214
XagI	CCTNNNNNAGG	1 cut(s)	2610
XbaI	TCTAGA	4 cut(s)	2297, 2950, 3869, 4015
XceI	RCATGY	4 cut(s)	1021, 4171, 4799, 5057
XcmI	CCANNNNNNNNNTGG	3 cut(s)	3625, 4961, 4997
XhoI	CTCGAG	5 cut(s)	520, 2174, 3571, 4302, 4763
XmiI	GTMKAC	1 cut(s)	3908
XmnI	GAANNNNTTC	5 cut(s)	138, 2364, 3129, 3540, 4161
ZraI	GACGTC	1 cut(s)	2990
ZrmI	AGTACT	2 cut(s)	239, 308
Zsp2I	ATGCAT	2 cut(s)	1023, 2209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.