Rap1-interacting factor 1 N terminal
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g02590 FvH4_1g02590 FvH4_1g02590 |
| malus_domestica | MD08G1122800.v1.1 MD15G1166600.v1.1 MD15G1167400.v1.1 |
| prunus_persica | Prupe.7G248700_v2.0.a1 Prupe.7G248700_v2.0.a1 Prupe.7G248700_v2.0.a1 |
| pyrus_communis | pycom15g14880 pycom15g14920 |
| rosa_chinensis | RchiOBHm_Chr2g0087621 |
| rosa_laevigata | RLG00000015887 |
| rosa_multiflora | Rmu_co8050730.1_g000001 Rmu_sc0002299.1_g000035 Rmu_sc0026063.1_g000001 Rmu_sc0026064.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00153360 |
| rosa_rugosa | Rorug01G0477200 Rorug01G0477300 Rorug01G0477400 Rorug01G0477500 |
| rosa_samantha | Rh2AG031000 Rh2BG030500 Rh2CG030900 Rh2DG030800 |
| rosa_wichuraiana | Rw2G002440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1716 |
| AccB1I | GGYRCC | 1 cut(s) | 2301 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1320 |
| AccBSI | CCGCTC | 1 cut(s) | 3029 |
| AccI | GTMKAC | 3 cut(s) | 389, 554, 992 |
| AccII | CGCG | 1 cut(s) | 148 |
| AccIII | TCCGGA | 2 cut(s) | 5, 3300 |
| AciI | CCGC | 9 cut(s) | 54, 148, 572, 691, 3021, 3027, 3105, 3187, 3219 |
| AcsI | RAATTY | 5 cut(s) | 747, 927, 2419, 2435, 2881 |
| AcuI | CTGAAG | 6 cut(s) | 33, 462, 1598, 1841, 2415, 2660 |
| AcvI | CACGTG | 1 cut(s) | 1035 |
| AdeI | CACNNNGTG | 1 cut(s) | 1038 |
| AfaI | GTAC | 6 cut(s) | 310, 1098, 1797, 1940, 2110, 2688 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 189, 697, 980, 1320, 1443 |
| AflII | CTTAAG | 2 cut(s) | 1441, 1963 |
| AflIII | ACRYGT | 2 cut(s) | 1032, 1605 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2928 |
| AhlI | ACTAGT | 2 cut(s) | 1925, 2092 |
| AjiI | CACGTC | 1 cut(s) | 2993 |
| AjnI | CCWGG | 3 cut(s) | 806, 1157, 1905 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1282, 1314 |
| Alw21I | GWGCWC | 1 cut(s) | 3114 |
| Alw26I | GTCTC | 4 cut(s) | 854, 1408, 2485, 2584 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2683 |
| Ama87I | CYCGRG | 1 cut(s) | 3229 |
| Aor13HI | TCCGGA | 2 cut(s) | 5, 3300 |
| AoxI | GGCC | 2 cut(s) | 1155, 3226 |
| ApeKI | GCWGC | 4 cut(s) | 106, 153, 323, 1959 |
| ApoI | RAATTY | 5 cut(s) | 747, 927, 2419, 2435, 2881 |
| AseI | ATTAAT | 1 cut(s) | 732 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1874 |
| AspLEI | GCGC | 1 cut(s) | 148 |
| AspS9I | GGNCC | 3 cut(s) | 1155, 1952, 3227 |
| AsuC2I | CCSGG | 3 cut(s) | 3015, 3230, 3231 |
| AsuHPI | GGTGA | 5 cut(s) | 827, 1767, 2831, 2863, 3119 |
| AsuNHI | GCTAGC | 1 cut(s) | 2318 |
| AvaI | CYCGRG | 1 cut(s) | 3229 |
| AvaII | GGWCC | 1 cut(s) | 1952 |
| BaeGI | GKGCMC | 1 cut(s) | 3193 |
| BamHI | GGATCC | 2 cut(s) | 1661, 3017 |
| BanI | GGYRCC | 1 cut(s) | 2301 |
| BanII | GRGCYC | 2 cut(s) | 475, 3114 |
| BbrPI | CACGTG | 1 cut(s) | 1035 |
| BbsI | GAAGAC | 1 cut(s) | 496 |
| Bbv12I | GWGCWC | 1 cut(s) | 3114 |
| BbvI | GCAGC | 4 cut(s) | 118, 140, 310, 1946 |
| BccI | CCATC | 6 cut(s) | 266, 675, 1251, 1322, 2825, 2876 |
| BceAI | ACGGC | 1 cut(s) | 3241 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 191, 225 |
| BciT130I | CCWGG | 3 cut(s) | 808, 1159, 1907 |
| BciVI | GTATCC | 3 cut(s) | 935, 1320, 3271 |
| BclI | TGATCA | 1 cut(s) | 2836 |
| BcnI | CCSGG | 3 cut(s) | 3015, 3230, 3231 |
| BcoDI | GTCTC | 4 cut(s) | 854, 1408, 2485, 2584 |
| BcuI | ACTAGT | 2 cut(s) | 1925, 2092 |
| BfaI | CTAG | 9 cut(s) | 1100, 1266, 1916, 1926, 1956, 2093, 2319, 2484, 3009 |
| BfmI | CTRYAG | 2 cut(s) | 1653, 2130 |
| BfrI | CTTAAG | 2 cut(s) | 1441, 1963 |
| BfuAI | ACCTGC | 1 cut(s) | 1716 |
| BfuI | GTATCC | 3 cut(s) | 935, 1320, 3271 |
| BglII | AGATCT | 1 cut(s) | 1454 |
| BisI | GCNGC | 5 cut(s) | 54, 107, 154, 324, 1960 |
| BlsI | GCNGC | 5 cut(s) | 55, 108, 155, 325, 1961 |
| Bme1390I | CCNGG | 6 cut(s) | 808, 1159, 1907, 3015, 3230, 3231 |
| Bme18I | GGWCC | 1 cut(s) | 1952 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2928 |
| BmeT110I | CYCGRG | 1 cut(s) | 3229 |
| BmgBI | CACGTC | 1 cut(s) | 2993 |
| BmgT120I | GGNCC | 3 cut(s) | 1155, 1952, 3227 |
| BmiI | GGNNCC | 5 cut(s) | 161, 474, 1663, 2303, 3019 |
| BmrFI | CCNGG | 6 cut(s) | 808, 1159, 1907, 3015, 3230, 3231 |
| BmrI | ACTGGG | 2 cut(s) | 633, 707 |
| BmtI | GCTAGC | 1 cut(s) | 2322 |
| BmuI | ACTGGG | 2 cut(s) | 633, 707 |
| BpiI | GAAGAC | 1 cut(s) | 496 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2758, 2790 |
| BpmI | CTGGAG | 2 cut(s) | 86, 2971 |
| Bpu10I | CCTNAGC | 2 cut(s) | 497, 753 |
| BpuEI | CTTGAG | 1 cut(s) | 2566 |
| BpuMI | CCSGG | 3 cut(s) | 3015, 3230, 3231 |
| BsaAI | YACGTR | 1 cut(s) | 1035 |
| BsaBI | GATNNNNATC | 2 cut(s) | 983, 3004 |
| BsaI | GGTCTC | 1 cut(s) | 2485 |
| BsaJI | CCNNGG | 6 cut(s) | 585, 611, 807, 1328, 1905, 3229 |
| BsaWI | WCCGGW | 3 cut(s) | 5, 1742, 3300 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 189, 697, 980, 1320, 1443 |
| Bse1I | ACTGG | 2 cut(s) | 628, 702 |
| Bse3DI | GCAATG | 1 cut(s) | 3126 |
| Bse8I | GATNNNNATC | 2 cut(s) | 983, 3004 |
| BseAI | TCCGGA | 2 cut(s) | 5, 3300 |
| BseBI | CCWGG | 3 cut(s) | 808, 1159, 1907 |
| BseDI | CCNNGG | 6 cut(s) | 585, 611, 807, 1328, 1905, 3229 |
| BseGI | GGATG | 9 cut(s) | 165, 250, 633, 686, 1438, 1736, 1974, 2817, 3234 |
| BseJI | GATNNNNATC | 2 cut(s) | 983, 3004 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 189, 697, 980, 1320, 1443 |
| BseMI | GCAATG | 1 cut(s) | 3126 |
| BseMII | CTCAG | 7 cut(s) | 230, 744, 1084, 1328, 2603, 2895, 3156 |
| BseNI | ACTGG | 2 cut(s) | 628, 702 |
| BseRI | GAGGAG | 2 cut(s) | 1652, 2779 |
| BseSI | GKGCMC | 1 cut(s) | 3193 |
| BseXI | GCAGC | 4 cut(s) | 118, 140, 310, 1946 |
| BsgI | GTGCAG | 3 cut(s) | 2218, 2595, 2606 |
| Bsh1236I | CGCG | 1 cut(s) | 148 |
| BshFI | GGCC | 2 cut(s) | 1157, 3228 |
| BshNI | GGYRCC | 1 cut(s) | 2301 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3114 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3229 |
| BsiSI | CCGG | 6 cut(s) | 6, 157, 1743, 3014, 3230, 3301 |
| BslFI | GGGAC | 1 cut(s) | 2200 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 189, 697, 980, 1320, 1443 |
| BsmAI | GTCTC | 4 cut(s) | 854, 1408, 2485, 2584 |
| BsmFI | GGGAC | 1 cut(s) | 2200 |
| BsmI | GAATGC | 3 cut(s) | 1534, 1869, 3310 |
| BsnI | GGCC | 2 cut(s) | 1157, 3228 |
| Bso31I | GGTCTC | 1 cut(s) | 2485 |
| BsoBI | CYCGRG | 1 cut(s) | 3229 |
| Bsp1286I | GDGCHC | 3 cut(s) | 475, 3114, 3193 |
| Bsp13I | TCCGGA | 2 cut(s) | 5, 3300 |
| Bsp1407I | TGTACA | 1 cut(s) | 1938 |
| Bsp19I | CCATGG | 1 cut(s) | 1328 |
| BspACI | CCGC | 9 cut(s) | 54, 148, 572, 691, 3021, 3027, 3105, 3187, 3219 |
| BspANI | GGCC | 2 cut(s) | 1157, 3228 |
| BspCNI | CTCAG | 7 cut(s) | 229, 745, 1083, 1329, 2604, 2896, 3157 |
| BspEI | TCCGGA | 2 cut(s) | 5, 3300 |
| BspFNI | CGCG | 1 cut(s) | 148 |
| BspHI | TCATGA | 1 cut(s) | 772 |
| BspLI | GGNNCC | 5 cut(s) | 161, 474, 1663, 2303, 3019 |
| BspMAI | CTGCAG | 1 cut(s) | 2134 |
| BspMI | ACCTGC | 1 cut(s) | 1716 |
| BspOI | GCTAGC | 1 cut(s) | 2322 |
| BspQI | GCTCTTC | 2 cut(s) | 2376, 2434 |
| BspT107I | GGYRCC | 1 cut(s) | 2301 |
| BspTI | CTTAAG | 2 cut(s) | 1441, 1963 |
| BspTNI | GGTCTC | 1 cut(s) | 2485 |
| BsrBI | CCGCTC | 1 cut(s) | 3029 |
| BsrDI | GCAATG | 1 cut(s) | 3126 |
| BsrGI | TGTACA | 1 cut(s) | 1938 |
| BsrI | ACTGG | 2 cut(s) | 628, 702 |
| BssECI | CCNNGG | 6 cut(s) | 585, 611, 807, 1328, 1905, 3229 |
| BssT1I | CCWWGG | 3 cut(s) | 585, 611, 1328 |
| Bst2UI | CCWGG | 3 cut(s) | 808, 1159, 1907 |
| Bst4CI | ACNGT | 6 cut(s) | 844, 920, 1402, 1676, 1757, 1949 |
| Bst6I | CTCTTC | 2 cut(s) | 2376, 2434 |
| BstAFI | CTTAAG | 2 cut(s) | 1441, 1963 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 637 |
| BstAUI | TGTACA | 1 cut(s) | 1938 |
| BstBAI | YACGTR | 1 cut(s) | 1035 |
| BstC8I | GCNNGC | 6 cut(s) | 144, 348, 1024, 2320, 2324, 3189 |
| BstDSI | CCRYGG | 1 cut(s) | 1328 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1441 |
| BstF5I | GGATG | 9 cut(s) | 165, 250, 633, 686, 1438, 1736, 1974, 2817, 3234 |
| BstFNI | CGCG | 1 cut(s) | 148 |
| BstHHI | GCGC | 1 cut(s) | 148 |
| BstMAI | GTCTC | 4 cut(s) | 854, 1408, 2485, 2584 |
| BstNI | CCWGG | 3 cut(s) | 808, 1159, 1907 |
| BstNSI | RCATGY | 4 cut(s) | 640, 909, 1609, 2326 |
| BstSCI | CCNGG | 6 cut(s) | 806, 1157, 1905, 3013, 3228, 3229 |
| BstSFI | CTRYAG | 2 cut(s) | 1653, 2130 |
| BstSLI | GKGCMC | 1 cut(s) | 3193 |
| BstUI | CGCG | 1 cut(s) | 148 |
| BstV1I | GCAGC | 4 cut(s) | 118, 140, 310, 1946 |
| BstV2I | GAAGAC | 1 cut(s) | 496 |
| BstX2I | RGATCY | 7 cut(s) | 701, 1333, 1454, 1661, 2278, 2362, 3017 |
| BstYI | RGATCY | 7 cut(s) | 701, 1333, 1454, 1661, 2278, 2362, 3017 |
| BsuI | GTATCC | 3 cut(s) | 935, 1320, 3271 |
| BsuRI | GGCC | 2 cut(s) | 1157, 3228 |
| BtgI | CCRYGG | 1 cut(s) | 1328 |
| BtgZI | GCGATG | 2 cut(s) | 2360, 2409 |
| BtrI | CACGTC | 1 cut(s) | 2993 |
| BtsCI | GGATG | 9 cut(s) | 165, 250, 633, 686, 1438, 1736, 1974, 2817, 3234 |
| BtsI | GCAGTG | 2 cut(s) | 1986, 2669 |
| BtsIMutI | CAGTG | 7 cut(s) | 974, 1078, 1681, 1954, 1986, 2669, 2684 |
| BveI | ACCTGC | 1 cut(s) | 1716 |
| Cac8I | GCNNGC | 6 cut(s) | 144, 348, 1024, 2320, 2324, 3189 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2683 |
| CciI | TCATGA | 1 cut(s) | 772 |
| CfoI | GCGC | 1 cut(s) | 148 |
| Cfr13I | GGNCC | 3 cut(s) | 1155, 1952, 3227 |
| Cfr9I | CCCGGG | 1 cut(s) | 3229 |
| CseI | GACGC | 2 cut(s) | 166, 1377 |
| Csp6I | GTAC | 6 cut(s) | 309, 1097, 1796, 1939, 2109, 2687 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1930, 1965, 2717, 2752 |
| CviQI | GTAC | 6 cut(s) | 309, 1097, 1796, 1939, 2109, 2687 |
| DraI | TTTAAA | 1 cut(s) | 1359 |
| DraIII | CACNNNGTG | 1 cut(s) | 1038 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2928 |
| Eam1104I | CTCTTC | 2 cut(s) | 2376, 2434 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2928 |
| EarI | CTCTTC | 2 cut(s) | 2376, 2434 |
| Ecl136II | GAGCTC | 1 cut(s) | 3112 |
| Eco130I | CCWWGG | 3 cut(s) | 585, 611, 1328 |
| Eco24I | GRGCYC | 2 cut(s) | 475, 3114 |
| Eco31I | GGTCTC | 1 cut(s) | 2485 |
| Eco32I | GATATC | 2 cut(s) | 2638, 3298 |
| Eco47I | GGWCC | 1 cut(s) | 1952 |
| Eco53kI | GAGCTC | 1 cut(s) | 3112 |
| Eco57I | CTGAAG | 6 cut(s) | 33, 462, 1598, 1841, 2415, 2660 |
| Eco72I | CACGTG | 1 cut(s) | 1035 |
| Eco88I | CYCGRG | 1 cut(s) | 3229 |
| EcoICRI | GAGCTC | 1 cut(s) | 3112 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1441 |
| EcoRI | GAATTC | 1 cut(s) | 2881 |
| EcoRII | CCWGG | 3 cut(s) | 806, 1157, 1905 |
| EcoRV | GATATC | 2 cut(s) | 2638, 3298 |
| EcoT14I | CCWWGG | 3 cut(s) | 585, 611, 1328 |
| EcoT38I | GRGCYC | 2 cut(s) | 475, 3114 |
| ErhI | CCWWGG | 3 cut(s) | 585, 611, 1328 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 929, 961, 1282, 1314 |
| FaqI | GGGAC | 1 cut(s) | 2200 |
| FauI | CCCGC | 1 cut(s) | 3180 |
| FauNDI | CATATG | 2 cut(s) | 2389, 2890 |
| FbaI | TGATCA | 1 cut(s) | 2836 |
| FblI | GTMKAC | 3 cut(s) | 389, 554, 992 |
| Fnu4HI | GCNGC | 5 cut(s) | 54, 107, 154, 324, 1960 |
| FokI | GGATG | 9 cut(s) | 152, 237, 640, 693, 1445, 1743, 1981, 2804, 3221 |
| FriOI | GRGCYC | 2 cut(s) | 475, 3114 |
| Fsp4HI | GCNGC | 5 cut(s) | 54, 107, 154, 324, 1960 |
| FspBI | CTAG | 9 cut(s) | 1100, 1266, 1916, 1926, 1956, 2093, 2319, 2484, 3009 |
| GlaI | GCGC | 1 cut(s) | 147 |
| GluI | GCNGC | 5 cut(s) | 54, 107, 154, 324, 1960 |
| GsuI | CTGGAG | 2 cut(s) | 86, 2971 |
| HaeIII | GGCC | 2 cut(s) | 1157, 3228 |
| HapII | CCGG | 6 cut(s) | 6, 157, 1743, 3014, 3230, 3301 |
| HgaI | GACGC | 2 cut(s) | 166, 1377 |
| HhaI | GCGC | 1 cut(s) | 148 |
| Hin6I | GCGC | 1 cut(s) | 146 |
| HinP1I | GCGC | 1 cut(s) | 146 |
| HincII | GTYRAC | 4 cut(s) | 390, 993, 1723, 1824 |
| HindII | GTYRAC | 4 cut(s) | 390, 993, 1723, 1824 |
| HpaII | CCGG | 6 cut(s) | 6, 157, 1743, 3014, 3230, 3301 |
| HphI | GGTGA | 5 cut(s) | 827, 1767, 2831, 2863, 3119 |
| Hpy99I | CGWCG | 2 cut(s) | 182, 266 |
| HpyAV | CCTTC | 8 cut(s) | 486, 649, 806, 1982, 2011, 2656, 3169, 3195 |
| HpyCH4III | ACNGT | 6 cut(s) | 844, 920, 1402, 1676, 1757, 1949 |
| HpyCH4IV | ACGT | 3 cut(s) | 1034, 2929, 2992 |
| HpySE526I | ACGT | 3 cut(s) | 1034, 2929, 2992 |
| HspAI | GCGC | 1 cut(s) | 146 |
| Kpn2I | TCCGGA | 2 cut(s) | 5, 3300 |
| Ksp22I | TGATCA | 1 cut(s) | 2836 |
| LguI | GCTCTTC | 2 cut(s) | 2376, 2434 |
| LmnI | GCTCC | 7 cut(s) | 150, 159, 478, 1279, 2108, 3034, 3322 |
| Lsp1109I | GCAGC | 4 cut(s) | 118, 140, 310, 1946 |
| MaeI | CTAG | 9 cut(s) | 1100, 1266, 1916, 1926, 1956, 2093, 2319, 2484, 3009 |
| MaeII | ACGT | 3 cut(s) | 1034, 2929, 2992 |
| MaeIII | GTNAC | 6 cut(s) | 1583, 1747, 1757, 1921, 3160, 3221 |
| MbiI | CCGCTC | 1 cut(s) | 3029 |
| MfeI | CAATTG | 2 cut(s) | 302, 2562 |
| MflI | RGATCY | 7 cut(s) | 701, 1333, 1454, 1661, 2278, 2362, 3017 |
| MhlI | GDGCHC | 3 cut(s) | 475, 3114, 3193 |
| MlyI | GAGTC | 5 cut(s) | 486, 1217, 1348, 2776, 2783 |
| MmeI | TCCRAC | 7 cut(s) | 141, 322, 1458, 2827, 2888, 2889, 3135 |
| MroI | TCCGGA | 2 cut(s) | 5, 3300 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1874 |
| MslI | CAYNNNNRTG | 6 cut(s) | 226, 679, 1091, 1766, 2327, 3251 |
| MspA1I | CMGCKG | 1 cut(s) | 1427 |
| MspCI | CTTAAG | 2 cut(s) | 1441, 1963 |
| MspI | CCGG | 6 cut(s) | 6, 157, 1743, 3014, 3230, 3301 |
| MspR9I | CCNGG | 6 cut(s) | 808, 1159, 1907, 3015, 3230, 3231 |
| MunI | CAATTG | 2 cut(s) | 302, 2562 |
| Mva1269I | GAATGC | 3 cut(s) | 1534, 1869, 3310 |
| MvaI | CCWGG | 3 cut(s) | 808, 1159, 1907 |
| MvnI | CGCG | 1 cut(s) | 148 |
| NciI | CCSGG | 3 cut(s) | 3015, 3230, 3231 |
| NcoI | CCATGG | 1 cut(s) | 1328 |
| NdeI | CATATG | 2 cut(s) | 2389, 2890 |
| NheI | GCTAGC | 1 cut(s) | 2318 |
| NlaIV | GGNNCC | 5 cut(s) | 161, 474, 1663, 2303, 3019 |
| NmuCI | GTSAC | 4 cut(s) | 1583, 1747, 1921, 3221 |
| NspI | RCATGY | 4 cut(s) | 640, 909, 1609, 2326 |
| PacI | TTAATTAA | 1 cut(s) | 732 |
| PaeI | GCATGC | 1 cut(s) | 2326 |
| PagI | TCATGA | 1 cut(s) | 772 |
| PciI | ACATGT | 1 cut(s) | 1605 |
| PciSI | GCTCTTC | 2 cut(s) | 2376, 2434 |
| PctI | GAATGC | 3 cut(s) | 1534, 1869, 3310 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1874 |
| PfeI | GAWTC | 6 cut(s) | 128, 776, 1076, 1162, 2042, 2156 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1320 |
| PkrI | GCNGC | 5 cut(s) | 55, 108, 155, 325, 1961 |
| PleI | GAGTC | 5 cut(s) | 486, 1217, 1347, 2775, 2783 |
| PmaCI | CACGTG | 1 cut(s) | 1035 |
| PmlI | CACGTG | 1 cut(s) | 1035 |
| PpsI | GAGTC | 5 cut(s) | 486, 1217, 1347, 2775, 2783 |
| Ppu21I | YACGTR | 1 cut(s) | 1035 |
| PscI | ACATGT | 1 cut(s) | 1605 |
| PshBI | ATTAAT | 1 cut(s) | 732 |
| Psp124BI | GAGCTC | 1 cut(s) | 3114 |
| Psp6I | CCWGG | 3 cut(s) | 806, 1157, 1905 |
| PspCI | CACGTG | 1 cut(s) | 1035 |
| PspGI | CCWGG | 3 cut(s) | 806, 1157, 1905 |
| PspN4I | GGNNCC | 5 cut(s) | 161, 474, 1663, 2303, 3019 |
| PspPI | GGNCC | 3 cut(s) | 1155, 1952, 3227 |
| PstI | CTGCAG | 1 cut(s) | 2134 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2683 |
| PsuI | RGATCY | 7 cut(s) | 701, 1333, 1454, 1661, 2278, 2362, 3017 |
| PvuII | CAGCTG | 1 cut(s) | 1427 |
| RsaI | GTAC | 6 cut(s) | 310, 1098, 1797, 1940, 2110, 2688 |
| RsaNI | GTAC | 6 cut(s) | 309, 1097, 1796, 1939, 2109, 2687 |
| RseI | CAYNNNNRTG | 6 cut(s) | 226, 679, 1091, 1766, 2327, 3251 |
| SacI | GAGCTC | 1 cut(s) | 3114 |
| SalI | GTCGAC | 2 cut(s) | 388, 991 |
| SapI | GCTCTTC | 2 cut(s) | 2376, 2434 |
| SatI | GCNGC | 5 cut(s) | 54, 107, 154, 324, 1960 |
| Sau96I | GGNCC | 3 cut(s) | 1155, 1952, 3227 |
| SchI | GAGTC | 5 cut(s) | 486, 1217, 1348, 2776, 2783 |
| ScrFI | CCNGG | 6 cut(s) | 808, 1159, 1907, 3015, 3230, 3231 |
| SduI | GDGCHC | 3 cut(s) | 475, 3114, 3193 |
| SfcI | CTRYAG | 2 cut(s) | 1653, 2130 |
| SinI | GGWCC | 1 cut(s) | 1952 |
| SmaI | CCCGGG | 1 cut(s) | 3231 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 226, 679, 1091, 1766, 2327, 3251 |
| SmlI | CTYRAG | 3 cut(s) | 1441, 1963, 2581 |
| SmoI | CTYRAG | 3 cut(s) | 1441, 1963, 2581 |
| SpeI | ACTAGT | 2 cut(s) | 1925, 2092 |
| SphI | GCATGC | 1 cut(s) | 2326 |
| SrfI | GCCCGGGC | 1 cut(s) | 3231 |
| SsiI | CCGC | 9 cut(s) | 54, 148, 572, 691, 3021, 3027, 3105, 3187, 3219 |
| SspI | AATATT | 4 cut(s) | 561, 1536, 1716, 2292 |
| SspMI | CTAG | 9 cut(s) | 1100, 1266, 1916, 1926, 1956, 2093, 2319, 2484, 3009 |
| SstI | GAGCTC | 1 cut(s) | 3114 |
| StyD4I | CCNGG | 6 cut(s) | 806, 1157, 1905, 3013, 3228, 3229 |
| StyI | CCWWGG | 3 cut(s) | 585, 611, 1328 |
| TaaI | ACNGT | 6 cut(s) | 844, 920, 1402, 1676, 1757, 1949 |
| TaiI | ACGT | 3 cut(s) | 1037, 2932, 2995 |
| TaqI | TCGA | 5 cut(s) | 24, 389, 992, 2449, 3134 |
| TaqII | GACCGA | 2 cut(s) | 540, 1847 |
| TatI | WGTACW | 4 cut(s) | 308, 1795, 1938, 2108 |
| TauI | GCSGC | 1 cut(s) | 56 |
| TfiI | GAWTC | 6 cut(s) | 128, 776, 1076, 1162, 2042, 2156 |
| TscAI | CASTG | 7 cut(s) | 981, 1078, 1681, 1954, 1986, 2676, 2684 |
| TseFI | GTSAC | 4 cut(s) | 1583, 1747, 1921, 3221 |
| TseI | GCWGC | 4 cut(s) | 106, 153, 323, 1959 |
| Tsp45I | GTSAC | 4 cut(s) | 1583, 1747, 1921, 3221 |
| TspDTI | ATGAA | 9 cut(s) | 347, 434, 668, 1180, 2030, 2245, 2363, 2433, 2540 |
| TspGWI | ACGGA | 2 cut(s) | 158, 243 |
| TspMI | CCCGGG | 1 cut(s) | 3229 |
| TspRI | CASTG | 7 cut(s) | 981, 1078, 1681, 1954, 1986, 2676, 2684 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1320 |
| Vha464I | CTTAAG | 2 cut(s) | 1441, 1963 |
| VpaK11BI | GGWCC | 1 cut(s) | 1952 |
| VspI | ATTAAT | 1 cut(s) | 732 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1441 |
| XapI | RAATTY | 5 cut(s) | 747, 927, 2419, 2435, 2881 |
| XbaI | TCTAGA | 1 cut(s) | 3008 |
| XceI | RCATGY | 4 cut(s) | 640, 909, 1609, 2326 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2676 |
| XmaI | CCCGGG | 1 cut(s) | 3229 |
| XmiI | GTMKAC | 3 cut(s) | 389, 554, 992 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1874 |
| XspI | CTAG | 9 cut(s) | 1100, 1266, 1916, 1926, 1956, 2093, 2319, 2484, 3009 |