Rh2AG031000

Rap1-interacting factor 1 N terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0006378
Physical Location & Seq
Reverse (-)
2153609 .. 2159916
6308 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG031000.1

Sequence Viewer

Length: 2592 bp
ATGTCGAATCTCTCAGACCAGCTCCAAGAAATCAAATCCCTAATTTCTTCACCCACCAAATCAAACAAGTCACTCGCTTATTCCACTCTATCACACCTTCAACAACAGTCCTCCGATGCTCTGATTCAAACACTCGCGCTGAGCTCGCAGAGCCTTCTCCGTTGGATCGTCGCCGATATTCAAGACGACGACGAAGAAATTGCGGCGCAGGCATTGAAATGTTTGGGTTTTATGATATACCATCCGGCCATTGGTTCCGAAATTTCAGTGGAGGATGTGAAGTTGGTTTTGGAATCATTGGTTAAACTCATTACAACTACGAAAATTAAGTCGGTTTGTAATTTAGGAGTGTGGTGCATATCTATACAACAGCTGAGTGAACCACTTTTGGCTCCCCATTTCCATTCTCTTTTGCGCGCAGTAGTTCATGCCATTGACAATCCCATTGGCTCTCTGTCAACAACTTTTGAGGCTATTCAGGCTGTCATTAAGCTAGCTACTCTTTTAAGTGAGAGCATGAGAGAGTTGTCTCATATATGGGCACCTCCAATATATAGAAGACTGCTTAGCTCTGATAAGAGAGACAGGGATATGTCAGAAAGGTGTCTGTTGAAGATTAGATCCACAATCATACCCCCTCCAATAGATCTCTCCAAGGTACTTGTCAGAGATTTAAAGACAAAGTTGCTCACTATGATGCACGATATGCTAACCAGTGGTATGAAGGTTCAAACTATTCAAGCATGGGGATGGTATATCCGCTTACTAGGGTCTCATGCCTTGAAGAACAGACATTTAATTAATGATATGCTGAAAATTCCTGAGAAAACATTTTCAGATCACGACTCACAAGTTCAGATTGCTTCCCAGGTTGCCTGGGAAGGTCTTATTGATGCTCTTATTCATCCTCCAATGATATTACCATGTGCAACAAATGCTGCAAAAGAGGATGATGGTACGCAAAAAAAGGGAACACATAAAGGAAACAGTGGTGACACCCAAAACACTGGATCTTTGAAAAGCGTAAGGCTGATCATGACACCACTGATAGGCATCATGTTGAGTGACTGTGATGTATCTGTCCACATGGCTTGCTTGAACACATGGTGCTATCTATTACATAGACTTGATACCTCTCTGAATGATTCTTCAATGATCAACCTGGTAGTAGACCCTATCTTTGAAGCAGCTTTTCAACTTGATCCTGATGGTAAGAGCTTCTGGGCTAGGGATCTGTGCATTAATTTGCTTGATGATTTTATATCAGCAAAATGTAAACCTCAAGGCTATGACCCACGTAACCAGGTAAGCCAGCAGTTATCAGCCAAAACCTCTATGATTGCTCCCATTATATCTAGCAGTTGCTCATGGAAGCAGTATCCTATTAAATGGTTGCCATGGGATTTAAGTCTGTTGGACTTTCATTTAAAGATGATCTACAGTCTCATCCATCAACCATCAAGGCAAACTGTCTGCCATGATAACAGGGTTCCAGCTGATGATGCTCCCTTAAGGTTATTTAGAGCTGTTTTGAAAGGAGTTGAACAGGAGTTCAAGAGGTCGTCCATCGATTATGATGATATTATGTTGTGTTTGAATGCAGTATTGAAGTTCTTAAGAAATATGTGTGAAGAACTAAGTCTGGATGGTAGTGACAGAAATGGCTTGCATCATGTATCATTTCAGTATATGGAGGCTGTCAGCGAGGTGATAGAACCTACTCTAATGGGATCCCCTCTTTACAAGGTGGCATTGAACATCAAGTATATTGAAAACCTGCAAATGATTCCTGACGTTGGATATGAAAAATCAGGTGTCTGCTCTATTGGTTATATGGAAATGGTTTCGCCAATGGTTTATTTAAGCGTACTTTATTTCACTGTGGTGGTTCGGTCAACTTTTAGTACGTCCAAAGCTGACTACATTCTGCAGGGAATGCAGCAATATTTTAAATTTATGTTATCATCTTTTGGTCCCCTGGAAAGTATCGTTATCACAACTGAATTATTGTACAAGCACACAGGGCCAGGCTGCTTAACGATGTGGATAGCAATAGCAGAAAGTCTGAAAAACTACATAAATGATGTGAAGGATCTTTCATTGTTCAAAATGGACTCTGAGAGTAAGGGTTGTTATGCCATGAGCCATCTAATGTCCTATCCACTGCTTGTATGCTCCTGTGCCCAGAAAGGCATTATGTCAGCAATGAGTGGATGCCCCTTAGAAACCCCCTCTTCTCCACAGATGAATACTGAGCTTGAACAAGTTATCACATTATGGAAGTCCCTCTATGGTTCTATCTGTACCTCACTGTCTGGGTGTATCATTGTTGGCAGTTTCTCTGAGGCTCTAGTTTCTGTATTGGACAGGTGCCTTGACAAGTATACTAGCATGCTTACATGTACTAACGAGCTTCACTTAAACTTCAAGGATTTGGATCTTCATCTCATTTCCTTATATGGTGATGCTTTTATGTGTATTCTGAAAAATTCCAGTTCTTCAGAATCAAGTTCTGATGGAAATACCAAGCATTACTATGATTACAAGATCACTAGTGGCATTAAAGGCTGCTTGACTTTGGCCATTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04550 map04550
Pfam Domains
Protein Families
Rif1_N

Protein Analysis

863

Amino Acids

96.52

Weight (kDa)

6.07

Isoelectric Point (pI)

42.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rif1_N PF12231 19 - 301 2.4e-32 Rap1-interacting factor 1 N terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1785
AccB1I GGYRCC 2 cut(s) 541, 2370
AccI GTMKAC 2 cut(s) 1170, 2384
AccII CGCG 2 cut(s) 137, 417
AciI CCGC 2 cut(s) 203, 760
AclWI GGATC 9 cut(s) 173, 615, 1018, 1196, 1239, 1725, 1738, 2100, 2445
AcoI YGGCCR 2 cut(s) 246, 2580
AcsI RAATTY 4 cut(s) 261, 816, 1952, 2488
AcuI CTGAAG 1 cut(s) 2484
AdeI CACNNNGTG 1 cut(s) 1107
AfaI GTAC 7 cut(s) 660, 958, 1869, 1906, 2012, 2305, 2404
AfiI CCNNNNNNNGG 3 cut(s) 251, 1049, 1796
AflII CTTAAG 2 cut(s) 1510, 1615
AflIII ACRYGT 1 cut(s) 2399
AhlI ACTAGT 1 cut(s) 2552
AjnI CCWGG 6 cut(s) 867, 875, 1161, 1302, 1977, 2026
AjuI GAANNNNNNNTTGG 2 cut(s) 272, 304
AleI CACNNNNGTG 1 cut(s) 1883
Alw21I GWGCWC 1 cut(s) 146
Alw26I GTCTC 4 cut(s) 534, 576, 777, 1448
AlwI GGATC 9 cut(s) 173, 615, 1018, 1196, 1239, 1725, 1738, 2100, 2445
AoxI GGCC 3 cut(s) 246, 2024, 2580
ApeKI GCWGC 5 cut(s) 938, 1187, 1939, 2031, 2568
ApoI RAATTY 4 cut(s) 261, 816, 1952, 2488
ArsI GACNNNNNNTTYG 4 cut(s) 314, 346, 1163, 1195
AseI ATTAAT 2 cut(s) 801, 1242
AspLEI GCGC 4 cut(s) 139, 208, 417, 419
AspS9I GGNCC 2 cut(s) 1973, 2024
AsuHPI GGTGA 4 cut(s) 42, 1004, 1720, 2474
AsuNHI GCTAGC 1 cut(s) 493
AvaII GGWCC 1 cut(s) 1973
BaeGI GKGCMC 2 cut(s) 544, 2185
BalI TGGCCA 1 cut(s) 2582
BamHI GGATCC 1 cut(s) 1730
BanI GGYRCC 2 cut(s) 541, 2370
BanII GRGCYC 1 cut(s) 146
BbsI GAAGAC 1 cut(s) 565
Bbv12I GWGCWC 1 cut(s) 146
BbvI GCAGC 5 cut(s) 925, 1199, 1951, 2018, 2555
BcgI CGANNNNNNTGC 2 cut(s) 182, 216
BciT130I CCWGG 6 cut(s) 869, 877, 1163, 1304, 1979, 2028
BciVI GTATCC 1 cut(s) 1389
BclI TGATCA 2 cut(s) 1032, 1155
BcoDI GTCTC 4 cut(s) 534, 576, 777, 1448
BcuI ACTAGT 1 cut(s) 2552
BfaI CTAG 7 cut(s) 494, 767, 1227, 1356, 2351, 2388, 2553
BfmI CTRYAG 2 cut(s) 1438, 1928
BfrI CTTAAG 2 cut(s) 1510, 1615
BfuAI ACCTGC 1 cut(s) 1785
BfuI GTATCC 1 cut(s) 1389
BglII AGATCT 1 cut(s) 646
BisI GCNGC 6 cut(s) 204, 939, 1188, 1940, 2032, 2569
BlpI GCTNAGC 2 cut(s) 140, 566
BlsI GCNGC 6 cut(s) 205, 940, 1189, 1941, 2033, 2570
Bme1390I CCNGG 6 cut(s) 869, 877, 1163, 1304, 1979, 2028
Bme18I GGWCC 1 cut(s) 1973
BmgT120I GGNCC 2 cut(s) 1973, 2024
BmiI GGNNCC 7 cut(s) 256, 393, 543, 1491, 1732, 1975, 2372
BmrFI CCNGG 6 cut(s) 869, 877, 1163, 1304, 1979, 2028
BmsI GCATC 8 cut(s) 106, 687, 883, 1062, 1492, 1678, 2204, 2455
BmtI GCTAGC 1 cut(s) 497
BpiI GAAGAC 1 cut(s) 565
Bpu1102I GCTNAGC 2 cut(s) 140, 566
BpuEI CTTGAG 1 cut(s) 1266
Bsa29I ATCGAT 1 cut(s) 1569
BsaAI YACGTR 1 cut(s) 1298
BsaBI GATNNNNATC 3 cut(s) 1052, 2436, 2442
BsaI GGTCTC 1 cut(s) 777
BsaJI CCNNGG 5 cut(s) 654, 867, 876, 1397, 1977
Bsc4I CCNNNNNNNGG 3 cut(s) 251, 1049, 1796
Bse1I ACTGG 3 cut(s) 714, 1012, 2493
Bse3DI GCAATG 1 cut(s) 2211
Bse8I GATNNNNATC 3 cut(s) 1052, 2436, 2442
BseBI CCWGG 6 cut(s) 869, 877, 1163, 1304, 1979, 2028
BseCI ATCGAT 1 cut(s) 1569
BseDI CCNNGG 5 cut(s) 654, 867, 876, 1397, 1977
BseGI GGATG 8 cut(s) 241, 280, 755, 904, 955, 1446, 1651, 2219
BseJI GATNNNNATC 3 cut(s) 1052, 2436, 2442
BseLI CCNNNNNNNGG 3 cut(s) 251, 1049, 1796
BseMI GCAATG 1 cut(s) 2211
BseMII CTCAG 7 cut(s) 27, 131, 365, 813, 2109, 2244, 2334
BseNI ACTGG 3 cut(s) 714, 1012, 2493
BsePI GCGCGC 1 cut(s) 415
BseSI GKGCMC 2 cut(s) 544, 2185
BseXI GCAGC 5 cut(s) 925, 1199, 1951, 2018, 2555
Bsh1236I CGCG 2 cut(s) 137, 417
BshFI GGCC 3 cut(s) 248, 2026, 2582
BshNI GGYRCC 2 cut(s) 541, 2370
BshVI ATCGAT 1 cut(s) 1569
BsiHKAI GWGCWC 1 cut(s) 146
BsiSI CCGG 1 cut(s) 245
BslFI GGGAC 2 cut(s) 1959, 2269
BslI CCNNNNNNNGG 3 cut(s) 251, 1049, 1796
BsmAI GTCTC 4 cut(s) 534, 576, 777, 1448
BsmFI GGGAC 2 cut(s) 1959, 2269
BsmI GAATGC 2 cut(s) 1603, 1941
BsnI GGCC 3 cut(s) 248, 2026, 2582
Bso31I GGTCTC 1 cut(s) 777
Bsp1286I GDGCHC 3 cut(s) 146, 544, 2185
Bsp1407I TGTACA 1 cut(s) 2010
Bsp1720I GCTNAGC 2 cut(s) 140, 566
Bsp19I CCATGG 1 cut(s) 1397
BspACI CCGC 2 cut(s) 203, 760
BspANI GGCC 3 cut(s) 248, 2026, 2582
BspCNI CTCAG 7 cut(s) 26, 132, 366, 814, 2110, 2245, 2335
BspDI ATCGAT 1 cut(s) 1569
BspFNI CGCG 2 cut(s) 137, 417
BspHI TCATGA 1 cut(s) 1035
BspLI GGNNCC 7 cut(s) 256, 393, 543, 1491, 1732, 1975, 2372
BspMAI CTGCAG 1 cut(s) 1932
BspMI ACCTGC 1 cut(s) 1785
BspOI GCTAGC 1 cut(s) 497
BspPI GGATC 9 cut(s) 173, 615, 1018, 1196, 1239, 1725, 1738, 2100, 2445
BspT107I GGYRCC 2 cut(s) 541, 2370
BspTI CTTAAG 2 cut(s) 1510, 1615
BspTNI GGTCTC 1 cut(s) 777
BsrDI GCAATG 1 cut(s) 2211
BsrGI TGTACA 1 cut(s) 2010
BsrI ACTGG 3 cut(s) 714, 1012, 2493
BssECI CCNNGG 5 cut(s) 654, 867, 876, 1397, 1977
BssHII GCGCGC 1 cut(s) 415
BssNAI GTATAC 1 cut(s) 2385
BssT1I CCWWGG 2 cut(s) 654, 1397
Bst1107I GTATAC 1 cut(s) 2385
Bst2UI CCWGG 6 cut(s) 869, 877, 1163, 1304, 1979, 2028
Bst4CI ACNGT 7 cut(s) 108, 989, 1070, 1442, 1471, 1882, 2313
Bst6I CTCTTC 1 cut(s) 2239
BstAFI CTTAAG 2 cut(s) 1510, 1615
BstAPI GCANNNNNTGC 3 cut(s) 706, 935, 1936
BstAUI TGTACA 1 cut(s) 2010
BstBAI YACGTR 1 cut(s) 1298
BstC8I GCNNGC 8 cut(s) 146, 210, 417, 495, 1093, 1313, 1667, 2393
BstDSI CCRYGG 1 cut(s) 1397
BstF5I GGATG 8 cut(s) 241, 280, 755, 904, 955, 1446, 1651, 2219
BstFNI CGCG 2 cut(s) 137, 417
BstHHI GCGC 4 cut(s) 139, 208, 417, 419
BstMAI GTCTC 4 cut(s) 534, 576, 777, 1448
BstNI CCWGG 6 cut(s) 869, 877, 1163, 1304, 1979, 2028
BstNSI RCATGY 2 cut(s) 2395, 2403
BstSCI CCNGG 6 cut(s) 867, 875, 1161, 1302, 1977, 2026
BstSFI CTRYAG 2 cut(s) 1438, 1928
BstSLI GKGCMC 2 cut(s) 544, 2185
BstUI CGCG 2 cut(s) 137, 417
BstV1I GCAGC 5 cut(s) 925, 1199, 1951, 2018, 2555
BstV2I GAAGAC 1 cut(s) 565
BstX2I RGATCY 7 cut(s) 620, 646, 1010, 1231, 1730, 2092, 2437
BstXI CCANNNNNNTGG 1 cut(s) 1007
BstYI RGATCY 7 cut(s) 620, 646, 1010, 1231, 1730, 2092, 2437
BstZ17I GTATAC 1 cut(s) 2385
Bsu15I ATCGAT 1 cut(s) 1569
BsuI GTATCC 1 cut(s) 1389
BsuRI GGCC 3 cut(s) 248, 2026, 2582
BsuTUI ATCGAT 1 cut(s) 1569
BtgI CCRYGG 1 cut(s) 1397
BtsCI GGATG 8 cut(s) 241, 280, 755, 904, 955, 1446, 1651, 2219
BtsI GCAGTG 1 cut(s) 2162
BtsIMutI CAGTG 8 cut(s) 273, 721, 994, 1005, 1043, 1878, 2162, 2309
BveI ACCTGC 1 cut(s) 1785
Cac8I GCNNGC 8 cut(s) 146, 210, 417, 495, 1093, 1313, 1667, 2393
CciI TCATGA 1 cut(s) 1035
CfoI GCGC 4 cut(s) 139, 208, 417, 419
Cfr13I GGNCC 2 cut(s) 1973, 2024
ClaI ATCGAT 1 cut(s) 1569
CsiI ACCWGGT 2 cut(s) 1161, 1302
Csp6I GTAC 7 cut(s) 659, 957, 1868, 1905, 2011, 2304, 2403
CspCI CAANNNNNGTGG 2 cut(s) 1073, 1108
CviQI GTAC 7 cut(s) 659, 957, 1868, 1905, 2011, 2304, 2403
DraI TTTAAA 3 cut(s) 675, 1428, 1951
DraIII CACNNNGTG 1 cut(s) 1107
EaeI YGGCCR 2 cut(s) 246, 2580
Eam1104I CTCTTC 1 cut(s) 2239
EarI CTCTTC 1 cut(s) 2239
Ecl136II GAGCTC 1 cut(s) 144
Eco130I CCWWGG 2 cut(s) 654, 1397
Eco24I GRGCYC 1 cut(s) 146
Eco31I GGTCTC 1 cut(s) 777
Eco47I GGWCC 1 cut(s) 1973
Eco53kI GAGCTC 1 cut(s) 144
Eco57I CTGAAG 1 cut(s) 2484
EcoICRI GAGCTC 1 cut(s) 144
EcoRII CCWGG 6 cut(s) 867, 875, 1161, 1302, 1977, 2026
EcoT14I CCWWGG 2 cut(s) 654, 1397
EcoT38I GRGCYC 1 cut(s) 146
ErhI CCWWGG 2 cut(s) 654, 1397
FaqI GGGAC 2 cut(s) 1959, 2269
FbaI TGATCA 2 cut(s) 1032, 1155
FblI GTMKAC 2 cut(s) 1170, 2384
Fnu4HI GCNGC 6 cut(s) 204, 939, 1188, 1940, 2032, 2569
FokI GGATG 8 cut(s) 228, 287, 762, 891, 962, 1433, 1658, 2226
FriOI GRGCYC 1 cut(s) 146
Fsp4HI GCNGC 6 cut(s) 204, 939, 1188, 1940, 2032, 2569
FspBI CTAG 7 cut(s) 494, 767, 1227, 1356, 2351, 2388, 2553
GlaI GCGC 4 cut(s) 138, 207, 416, 418
GluI GCNGC 6 cut(s) 204, 939, 1188, 1940, 2032, 2569
HaeIII GGCC 3 cut(s) 248, 2026, 2582
HapII CCGG 1 cut(s) 245
HhaI GCGC 4 cut(s) 139, 208, 417, 419
Hin6I GCGC 4 cut(s) 137, 206, 415, 417
HinP1I GCGC 4 cut(s) 137, 206, 415, 417
HincII GTYRAC 2 cut(s) 459, 1896
HindII GTYRAC 2 cut(s) 459, 1896
HinfI GANTC 8 cut(s) 7, 124, 293, 845, 1145, 1786, 2114, 2504
HpaII CCGG 1 cut(s) 245
HphI GGTGA 4 cut(s) 42, 1004, 1720, 2474
Hpy166II GTNNAC 7 cut(s) 380, 459, 1084, 1171, 1277, 1896, 2385
Hpy188III TCNNGA 8 cut(s) 182, 821, 842, 1036, 1205, 1555, 1643, 1790
Hpy8I GTNNAC 7 cut(s) 380, 459, 1084, 1171, 1277, 1896, 2385
Hpy99I CGWCG 3 cut(s) 173, 191, 194
HpyAV CCTTC 5 cut(s) 107, 164, 718, 875, 2083
HpyCH4III ACNGT 7 cut(s) 108, 989, 1070, 1442, 1471, 1882, 2313
HpyCH4IV ACGT 3 cut(s) 1297, 1794, 1907
HpySE526I ACGT 3 cut(s) 1297, 1794, 1907
HspAI GCGC 4 cut(s) 137, 206, 415, 417
Ksp22I TGATCA 2 cut(s) 1032, 1155
LmnI GCTCC 5 cut(s) 27, 397, 1348, 1510, 2180
Lsp1109I GCAGC 5 cut(s) 925, 1199, 1951, 2018, 2555
LweI GCATC 8 cut(s) 106, 687, 883, 1062, 1492, 1678, 2204, 2455
MabI ACCWGGT 2 cut(s) 1161, 1302
MaeI CTAG 7 cut(s) 494, 767, 1227, 1356, 2351, 2388, 2553
MaeII ACGT 3 cut(s) 1297, 1794, 1907
MaeIII GTNAC 5 cut(s) 69, 992, 1064, 1298, 1652
MflI RGATCY 7 cut(s) 620, 646, 1010, 1231, 1730, 2092, 2437
MhlI GDGCHC 3 cut(s) 146, 544, 2185
MlsI TGGCCA 1 cut(s) 2582
MluNI TGGCCA 1 cut(s) 2582
MlyI GAGTC 2 cut(s) 839, 2108
MmeI TCCRAC 3 cut(s) 143, 1395, 1777
Mox20I TGGCCA 1 cut(s) 2582
MscI TGGCCA 1 cut(s) 2582
MslI CAYNNNNRTG 5 cut(s) 217, 695, 748, 1883, 2535
Msp20I TGGCCA 1 cut(s) 2582
MspA1I CMGCKG 2 cut(s) 373, 1496
MspCI CTTAAG 2 cut(s) 1510, 1615
MspI CCGG 1 cut(s) 245
MspR9I CCNGG 6 cut(s) 869, 877, 1163, 1304, 1979, 2028
Mva1269I GAATGC 2 cut(s) 1603, 1941
MvaI CCWGG 6 cut(s) 869, 877, 1163, 1304, 1979, 2028
MvnI CGCG 2 cut(s) 137, 417
NcoI CCATGG 1 cut(s) 1397
NheI GCTAGC 1 cut(s) 493
NlaIV GGNNCC 7 cut(s) 256, 393, 543, 1491, 1732, 1975, 2372
NmuCI GTSAC 4 cut(s) 69, 992, 1064, 1652
NspI RCATGY 2 cut(s) 2395, 2403
OliI CACNNNNGTG 1 cut(s) 1883
PacI TTAATTAA 1 cut(s) 801
PaeI GCATGC 1 cut(s) 2395
PagI TCATGA 1 cut(s) 1035
PauI GCGCGC 1 cut(s) 415
PciI ACATGT 1 cut(s) 2399
PctI GAATGC 2 cut(s) 1603, 1941
PfeI GAWTC 6 cut(s) 7, 124, 293, 1145, 1786, 2504
PkrI GCNGC 6 cut(s) 205, 940, 1189, 1941, 2033, 2570
PleI GAGTC 2 cut(s) 839, 2108
PpsI GAGTC 2 cut(s) 839, 2108
Ppu21I YACGTR 1 cut(s) 1298
PscI ACATGT 1 cut(s) 2399
PshBI ATTAAT 2 cut(s) 801, 1242
Psp124BI GAGCTC 1 cut(s) 146
Psp6I CCWGG 6 cut(s) 867, 875, 1161, 1302, 1977, 2026
PspGI CCWGG 6 cut(s) 867, 875, 1161, 1302, 1977, 2026
PspN4I GGNNCC 7 cut(s) 256, 393, 543, 1491, 1732, 1975, 2372
PspPI GGNCC 2 cut(s) 1973, 2024
PstI CTGCAG 1 cut(s) 1932
PsuI RGATCY 7 cut(s) 620, 646, 1010, 1231, 1730, 2092, 2437
PteI GCGCGC 1 cut(s) 415
PvuII CAGCTG 2 cut(s) 373, 1496
RsaI GTAC 7 cut(s) 660, 958, 1869, 1906, 2012, 2305, 2404
RsaNI GTAC 7 cut(s) 659, 957, 1868, 1905, 2011, 2304, 2403
RseI CAYNNNNRTG 5 cut(s) 217, 695, 748, 1883, 2535
SacI GAGCTC 1 cut(s) 146
SatI GCNGC 6 cut(s) 204, 939, 1188, 1940, 2032, 2569
Sau96I GGNCC 2 cut(s) 1973, 2024
SchI GAGTC 2 cut(s) 839, 2108
ScrFI CCNGG 6 cut(s) 869, 877, 1163, 1304, 1979, 2028
SduI GDGCHC 3 cut(s) 146, 544, 2185
SexAI ACCWGGT 2 cut(s) 1161, 1302
SfaNI GCATC 8 cut(s) 106, 687, 883, 1062, 1492, 1678, 2204, 2455
SfcI CTRYAG 2 cut(s) 1438, 1928
SinI GGWCC 1 cut(s) 1973
SmiMI CAYNNNNRTG 5 cut(s) 217, 695, 748, 1883, 2535
SmlI CTYRAG 3 cut(s) 1281, 1510, 1615
SmoI CTYRAG 3 cut(s) 1281, 1510, 1615
SpeI ACTAGT 1 cut(s) 2552
SphI GCATGC 1 cut(s) 2395
SsiI CCGC 2 cut(s) 203, 760
SspI AATATT 1 cut(s) 1946
SspMI CTAG 7 cut(s) 494, 767, 1227, 1356, 2351, 2388, 2553
SstI GAGCTC 1 cut(s) 146
StyD4I CCNGG 6 cut(s) 867, 875, 1161, 1302, 1977, 2026
StyI CCWWGG 2 cut(s) 654, 1397
TaaI ACNGT 7 cut(s) 108, 989, 1070, 1442, 1471, 1882, 2313
TaiI ACGT 3 cut(s) 1300, 1797, 1910
TaqI TCGA 2 cut(s) 5, 1569
TaqII GACCGA 1 cut(s) 1881
TatI WGTACW 2 cut(s) 2010, 2402
TauI GCSGC 1 cut(s) 206
TfiI GAWTC 6 cut(s) 7, 124, 293, 1145, 1786, 2504
TscAI CASTG 8 cut(s) 273, 721, 994, 1012, 1050, 1885, 2169, 2316
TseFI GTSAC 4 cut(s) 69, 992, 1064, 1652
TseI GCWGC 5 cut(s) 938, 1187, 1939, 2031, 2568
Tsp45I GTSAC 4 cut(s) 69, 992, 1064, 1652
TspDTI ATGAA 8 cut(s) 416, 737, 893, 1412, 1818, 2088, 2261, 2432
TspGWI ACGGA 1 cut(s) 149
TspRI CASTG 8 cut(s) 273, 721, 994, 1012, 1050, 1885, 2169, 2316
Vha464I CTTAAG 2 cut(s) 1510, 1615
VpaK11BI GGWCC 1 cut(s) 1973
VspI ATTAAT 2 cut(s) 801, 1242
XapI RAATTY 4 cut(s) 261, 816, 1952, 2488
XceI RCATGY 2 cut(s) 2395, 2403
XcmI CCANNNNNNNNNTGG 1 cut(s) 248
XmiI GTMKAC 2 cut(s) 1170, 2384
XspI CTAG 7 cut(s) 494, 767, 1227, 1356, 2351, 2388, 2553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.