pycom15g18920

membrane protein C776.05-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0006796
Physical Location & Seq
Reverse (-)
13422904 .. 13425749
2846 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1194 bp
ATGTCCAGCGGCGACGACCCTATAGAGGAAACAAATGGGGATTCGTTTCACCAAGCAATGAGGCAACGGTTGAAAGATCGGTCAAAGAAAGTTGCTCAGACCAAAGAGATTTTATCGAAACAAGCGGTTCAGACCAGAGAGATCCTCTCAAAGCAGGCTGTGAAGATCGCCAAACAAGCTGAGGAGCATGAAAAGTTCATCAACAAGGTGACGCATTTTGTGGGGGTTCTCAGTTTCGGTGGATTTTGCTTCCTCTTAGGAGCAAGACCGCAAGATACGCGATATGTATATTGCTTGTTCTATTTCATCTTTGTTCCTCTTCGTTGGATATACTATCGGTTCAAGAAATGGCATTACTACCTTTTGGACTTTTGCTACTATGCCAACACTATATTTTTGGTTGACCTGCTTCTTTATCCAAGGAACGAAAAGTTTTTCATGGTTTGCTTCTCATTTGCTGAGGGGCCGTTAGCATGGGCATTGATTGTTTGGCGTTGTAGCTTGGTTTTTAGTTCTCTTGACAAACTTGTTAGTGTCCTCATACATCTTTTACCTGGGTTAGTTTTCTTCACTATTCGATGGTGGGATCCAGCAACTTTTGCAGCAATGCATCCAGAAGGAACTTCTCGCAGAGCTTCATGGCCTTACGTAGAAAATAAATCCTACCTTTGGGTATGGCTCTTTTGGGTGCCCTTGTTTGCTTACACCCTCTGGCAGGCTTTGTATTTTCTCATTGTCAATGTTCTACGTCGACAAAGGCTGTTGAGAGATCCCGAAGTCATGACTTCTTACAGGGAGCTCTCAAAGAAGGCACAGAAAGCAAACAATGTATGGTGGCGCTTGAGCGGTTTGCTTGGGGATCAGAATCGCTTGCTCATGTACACTCTACTCCAAGCCGTATTTACTGTGGCAACAATGGCGCTCACGGTCCCTATCTTCTTGTCGTATGAACTGCACATTATCTTCCAAATGCTCAAGGTTTCCGCATCTGTGTGGAACGGAGGTAGTTTCTTGCTGGAGGTAATGCCGAGACAAGTGATTCTCAAGGAGAAGAAGAAATCGGAAGTGCAGCCAACAGAGACTCGGGGAGATCAACCATCGGATTATGATCAAAGGACTCGGGGAGATCAACCATCGGATTATGATCAAAGGACGCACAATTCAGTCGAGGCATCCCCAAGTCCTCCGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2838

Protein Analysis

398

Amino Acids

46.65

Weight (kDa)

9.34

Isoelectric Point (pI)

47.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2838 PF10998 69 - 178 4.1e-36 Protein of unknown function (DUF2838)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 414
AccB1I GGYRCC 1 cut(s) 688
AccBSI CCGCTC 1 cut(s) 846
AccI GTMKAC 1 cut(s) 751
AccII CGCG 1 cut(s) 280
AciI CCGC 5 cut(s) 9, 125, 269, 846, 984
AclWI GGATC 5 cut(s) 136, 581, 594, 764, 867
AfaI GTAC 1 cut(s) 881
AfiI CCNNNNNNNGG 3 cut(s) 25, 669, 715
AgsI TTSAA 2 cut(s) 73, 343
AjnI CCWGG 1 cut(s) 553
AluBI AGCT 4 cut(s) 179, 501, 635, 799
AluI AGCT 4 cut(s) 179, 501, 635, 799
Alw21I GWGCWC 1 cut(s) 801
Alw26I GTCTC 2 cut(s) 1024, 1073
AlwI GGATC 5 cut(s) 136, 581, 594, 764, 867
Ama87I CYCGRG 2 cut(s) 1083, 1119
AoxI GGCC 2 cut(s) 464, 641
ApeKI GCWGC 2 cut(s) 602, 1069
AspLEI GCGC 2 cut(s) 840, 922
AspS9I GGNCC 2 cut(s) 464, 928
AsuHPI GGTGA 2 cut(s) 41, 220
AvaI CYCGRG 2 cut(s) 1083, 1119
AvaII GGWCC 1 cut(s) 928
BaeGI GKGCMC 1 cut(s) 693
BamHI GGATCC 1 cut(s) 586
BanI GGYRCC 1 cut(s) 688
BanII GRGCYC 1 cut(s) 801
Bbv12I GWGCWC 1 cut(s) 801
BbvCI CCTCAGC 2 cut(s) 180, 459
BbvI GCAGC 2 cut(s) 614, 1081
BccI CCATC 3 cut(s) 573, 1105, 1141
BceAI ACGGC 2 cut(s) 451, 881
BciT130I CCWGG 1 cut(s) 555
BclI TGATCA 2 cut(s) 1108, 1144
BcoDI GTCTC 2 cut(s) 1024, 1073
BfaI CTAG 1 cut(s) 1192
BfmI CTRYAG 1 cut(s) 21
BfoI RGCGCY 2 cut(s) 841, 923
BfuAI ACCTGC 1 cut(s) 414
BisI GCNGC 3 cut(s) 10, 603, 1070
BlsI GCNGC 3 cut(s) 11, 604, 1071
Bme1390I CCNGG 1 cut(s) 555
Bme18I GGWCC 1 cut(s) 928
BmeT110I CYCGRG 2 cut(s) 1083, 1119
BmgT120I GGNCC 2 cut(s) 464, 928
BmiI GGNNCC 4 cut(s) 465, 588, 690, 930
BmrFI CCNGG 1 cut(s) 555
BmsI GCATC 3 cut(s) 619, 995, 1181
BplI GAGNNNNNCTC 4 cut(s) 129, 161, 131, 163
BpmI CTGGAG 1 cut(s) 1037
Bpu10I CCTNAGC 2 cut(s) 180, 459
BpuEI CTTGAG 3 cut(s) 862, 959, 1028
BsaAI YACGTR 1 cut(s) 649
BsaBI GATNNNNATC 3 cut(s) 864, 1107, 1143
BsaJI CCNNGG 2 cut(s) 419, 554
Bsc4I CCNNNNNNNGG 3 cut(s) 25, 669, 715
Bse3DI GCAATG 2 cut(s) 63, 612
Bse8I GATNNNNATC 3 cut(s) 864, 1107, 1143
BseBI CCWGG 1 cut(s) 555
BseDI CCNNGG 2 cut(s) 419, 554
BseGI GGATG 2 cut(s) 610, 1172
BseJI GATNNNNATC 3 cut(s) 864, 1107, 1143
BseLI CCNNNNNNNGG 3 cut(s) 25, 669, 715
BseMI GCAATG 2 cut(s) 63, 612
BseMII CTCAG 4 cut(s) 110, 171, 244, 450
BseRI GAGGAG 1 cut(s) 197
BseSI GKGCMC 1 cut(s) 693
BseXI GCAGC 2 cut(s) 614, 1081
BsgI GTGCAG 2 cut(s) 938, 1088
Bsh1236I CGCG 1 cut(s) 280
BshFI GGCC 2 cut(s) 466, 643
BshNI GGYRCC 1 cut(s) 688
BsiHKAI GWGCWC 1 cut(s) 801
BsiHKCI CYCGRG 2 cut(s) 1083, 1119
BslFI GGGAC 1 cut(s) 914
BslI CCNNNNNNNGG 3 cut(s) 25, 669, 715
BsmAI GTCTC 2 cut(s) 1024, 1073
BsmFI GGGAC 1 cut(s) 914
BsnI GGCC 2 cut(s) 466, 643
BsoBI CYCGRG 2 cut(s) 1083, 1119
Bsp1286I GDGCHC 2 cut(s) 693, 801
Bsp1407I TGTACA 1 cut(s) 879
BspACI CCGC 5 cut(s) 9, 125, 269, 846, 984
BspANI GGCC 2 cut(s) 466, 643
BspCNI CTCAG 4 cut(s) 109, 172, 243, 451
BspFNI CGCG 1 cut(s) 280
BspHI TCATGA 1 cut(s) 780
BspLI GGNNCC 4 cut(s) 465, 588, 690, 930
BspMI ACCTGC 1 cut(s) 414
BspPI GGATC 5 cut(s) 136, 581, 594, 764, 867
BspT107I GGYRCC 1 cut(s) 688
BsrBI CCGCTC 1 cut(s) 846
BsrDI GCAATG 2 cut(s) 63, 612
BsrGI TGTACA 1 cut(s) 879
BssECI CCNNGG 2 cut(s) 419, 554
BssT1I CCWWGG 1 cut(s) 419
Bst2UI CCWGG 1 cut(s) 555
Bst4CI ACNGT 3 cut(s) 69, 907, 928
Bst6I CTCTTC 1 cut(s) 324
BstAPI GCANNNNNTGC 1 cut(s) 599
BstAUI TGTACA 1 cut(s) 879
BstBAI YACGTR 1 cut(s) 649
BstC8I GCNNGC 3 cut(s) 156, 717, 872
BstDEI CTNAG 5 cut(s) 96, 180, 230, 256, 459
BstENI CCTNNNNNAGG 1 cut(s) 713
BstF5I GGATG 2 cut(s) 610, 1172
BstFNI CGCG 1 cut(s) 280
BstH2I RGCGCY 2 cut(s) 841, 923
BstHHI GCGC 2 cut(s) 840, 922
BstMAI GTCTC 2 cut(s) 1024, 1073
BstMWI GCNNNNNNNGC 5 cut(s) 176, 277, 599, 818, 917
BstNI CCWGG 1 cut(s) 555
BstSCI CCNGG 1 cut(s) 553
BstSFI CTRYAG 1 cut(s) 21
BstSLI GKGCMC 1 cut(s) 693
BstSNI TACGTA 1 cut(s) 649
BstUI CGCG 1 cut(s) 280
BstV1I GCAGC 2 cut(s) 614, 1081
BstX2I RGATCY 3 cut(s) 141, 586, 769
BstYI RGATCY 3 cut(s) 141, 586, 769
BsuRI GGCC 2 cut(s) 466, 643
BtsCI GGATG 2 cut(s) 610, 1172
BveI ACCTGC 1 cut(s) 414
Cac8I GCNNGC 3 cut(s) 156, 717, 872
CciI TCATGA 1 cut(s) 780
CfoI GCGC 2 cut(s) 840, 922
Cfr13I GGNCC 2 cut(s) 464, 928
CseI GACGC 2 cut(s) 220, 1162
Csp6I GTAC 1 cut(s) 880
CviAII CATG 6 cut(s) 188, 439, 474, 639, 781, 877
CviQI GTAC 1 cut(s) 880
DdeI CTNAG 5 cut(s) 96, 180, 230, 256, 459
Eam1104I CTCTTC 1 cut(s) 324
EarI CTCTTC 1 cut(s) 324
Ecl136II GAGCTC 1 cut(s) 799
Eco105I TACGTA 1 cut(s) 649
Eco130I CCWWGG 1 cut(s) 419
Eco24I GRGCYC 1 cut(s) 801
Eco47I GGWCC 1 cut(s) 928
Eco53kI GAGCTC 1 cut(s) 799
Eco88I CYCGRG 2 cut(s) 1083, 1119
EcoICRI GAGCTC 1 cut(s) 799
EcoNI CCTNNNNNAGG 1 cut(s) 713
EcoRII CCWGG 1 cut(s) 553
EcoT14I CCWWGG 1 cut(s) 419
EcoT22I ATGCAT 1 cut(s) 612
EcoT38I GRGCYC 1 cut(s) 801
ErhI CCWWGG 1 cut(s) 419
FaeI CATG 6 cut(s) 191, 442, 477, 642, 784, 880
FaqI GGGAC 1 cut(s) 914
FatI CATG 6 cut(s) 187, 438, 473, 638, 780, 876
FbaI TGATCA 2 cut(s) 1108, 1144
FblI GTMKAC 1 cut(s) 751
Fnu4HI GCNGC 3 cut(s) 10, 603, 1070
FokI GGATG 2 cut(s) 597, 1159
FriOI GRGCYC 1 cut(s) 801
Fsp4HI GCNGC 3 cut(s) 10, 603, 1070
FspBI CTAG 1 cut(s) 1192
GlaI GCGC 2 cut(s) 839, 921
GluI GCNGC 3 cut(s) 10, 603, 1070
GsuI CTGGAG 1 cut(s) 1037
HaeII RGCGCY 2 cut(s) 841, 923
HaeIII GGCC 2 cut(s) 466, 643
HgaI GACGC 2 cut(s) 220, 1162
HhaI GCGC 2 cut(s) 840, 922
Hin1II CATG 6 cut(s) 191, 442, 477, 642, 784, 880
Hin6I GCGC 2 cut(s) 838, 920
HinP1I GCGC 2 cut(s) 838, 920
HincII GTYRAC 2 cut(s) 403, 752
HindII GTYRAC 2 cut(s) 403, 752
HinfI GANTC 5 cut(s) 41, 865, 1039, 1081, 1117
HphI GGTGA 2 cut(s) 41, 220
Hpy166II GTNNAC 3 cut(s) 403, 752, 882
Hpy188I TCNGA 7 cut(s) 99, 132, 864, 1063, 1102, 1138, 1188
Hpy188III TCNNGA 5 cut(s) 343, 518, 614, 773, 781
Hpy8I GTNNAC 3 cut(s) 403, 752, 882
Hpy99I CGWCG 2 cut(s) 17, 753
HpyAV CCTTC 2 cut(s) 611, 802
HpyCH4III ACNGT 3 cut(s) 69, 907, 928
HpyCH4IV ACGT 2 cut(s) 648, 748
HpyCH4V TGCA 4 cut(s) 602, 610, 955, 1069
HpyF10VI GCNNNNNNNGC 5 cut(s) 176, 277, 599, 818, 917
HpyF3I CTNAG 5 cut(s) 96, 180, 230, 256, 459
HpySE526I ACGT 2 cut(s) 648, 748
Hsp92II CATG 6 cut(s) 191, 442, 477, 642, 784, 880
HspAI GCGC 2 cut(s) 838, 920
Ksp22I TGATCA 2 cut(s) 1108, 1144
LmnI GCTCC 3 cut(s) 184, 260, 796
Lsp1109I GCAGC 2 cut(s) 614, 1081
LweI GCATC 3 cut(s) 619, 995, 1181
MaeI CTAG 1 cut(s) 1192
MaeII ACGT 2 cut(s) 648, 748
MaeIII GTNAC 1 cut(s) 208
MbiI CCGCTC 1 cut(s) 846
MboII GAAGA 7 cut(s) 175, 311, 559, 928, 955, 1063, 1066
MflI RGATCY 3 cut(s) 141, 586, 769
MhlI GDGCHC 2 cut(s) 693, 801
MluCI AATT 1 cut(s) 1159
MlyI GAGTC 2 cut(s) 1075, 1111
MmeI TCCRAC 1 cut(s) 305
Mph1103I ATGCAT 1 cut(s) 612
MslI CAYNNNNRTG 1 cut(s) 991
MspA1I CMGCKG 1 cut(s) 9
MspR9I CCNGG 1 cut(s) 555
MvaI CCWGG 1 cut(s) 555
MvnI CGCG 1 cut(s) 280
MwoI GCNNNNNNNGC 5 cut(s) 176, 277, 599, 818, 917
NlaIII CATG 6 cut(s) 191, 442, 477, 642, 784, 880
NlaIV GGNNCC 4 cut(s) 465, 588, 690, 930
NmeAIII GCCGAG 1 cut(s) 1053
NmuCI GTSAC 1 cut(s) 208
NsiI ATGCAT 1 cut(s) 612
PagI TCATGA 1 cut(s) 780
PfeI GAWTC 3 cut(s) 41, 865, 1039
PkrI GCNGC 3 cut(s) 11, 604, 1071
PleI GAGTC 2 cut(s) 1075, 1111
PpsI GAGTC 2 cut(s) 1075, 1111
Ppu21I YACGTR 1 cut(s) 649
Psp124BI GAGCTC 1 cut(s) 801
Psp6I CCWGG 1 cut(s) 553
PspGI CCWGG 1 cut(s) 553
PspN4I GGNNCC 4 cut(s) 465, 588, 690, 930
PspPI GGNCC 2 cut(s) 464, 928
PsuI RGATCY 3 cut(s) 141, 586, 769
RsaI GTAC 1 cut(s) 881
RsaNI GTAC 1 cut(s) 880
RseI CAYNNNNRTG 1 cut(s) 991
SacI GAGCTC 1 cut(s) 801
SalI GTCGAC 1 cut(s) 750
SatI GCNGC 3 cut(s) 10, 603, 1070
Sau96I GGNCC 2 cut(s) 464, 928
SchI GAGTC 2 cut(s) 1075, 1111
ScrFI CCNGG 1 cut(s) 555
SduI GDGCHC 2 cut(s) 693, 801
SfaNI GCATC 3 cut(s) 619, 995, 1181
SfcI CTRYAG 1 cut(s) 21
SinI GGWCC 1 cut(s) 928
SmiMI CAYNNNNRTG 1 cut(s) 991
SmlI CTYRAG 3 cut(s) 841, 974, 1043
SmoI CTYRAG 3 cut(s) 841, 974, 1043
SnaBI TACGTA 1 cut(s) 649
Sse9I AATT 1 cut(s) 1159
SsiI CCGC 5 cut(s) 9, 125, 269, 846, 984
SspMI CTAG 1 cut(s) 1192
SstI GAGCTC 1 cut(s) 801
StyD4I CCNGG 1 cut(s) 553
StyI CCWWGG 1 cut(s) 419
TaaI ACNGT 3 cut(s) 69, 907, 928
TaiI ACGT 2 cut(s) 651, 751
TaqI TCGA 4 cut(s) 116, 577, 751, 1167
TaqII GACCGA 1 cut(s) 69
TasI AATT 1 cut(s) 1159
TatI WGTACW 1 cut(s) 879
TauI GCSGC 1 cut(s) 12
TfiI GAWTC 3 cut(s) 41, 865, 1039
TseFI GTSAC 1 cut(s) 208
TseI GCWGC 2 cut(s) 602, 1069
Tsp45I GTSAC 1 cut(s) 208
TspDTI ATGAA 6 cut(s) 187, 204, 295, 427, 627, 963
TspGWI ACGGA 1 cut(s) 1014
VpaK11BI GGWCC 1 cut(s) 928
XagI CCTNNNNNAGG 1 cut(s) 713
XmiI GTMKAC 1 cut(s) 751
XspI CTAG 1 cut(s) 1192
Zsp2I ATGCAT 1 cut(s) 612
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.