pycom15g22140

beta-galactosidase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
16237967 .. 16240700
2734 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g22140.10

Sequence Viewer

Length: 1350 bp
ATGGAACCAAACTCAGCTTCCAAGCTGGGTTTTTTCATGGGGTTGTTTTTGCTGCTGGGTTTTCAGCTGGTTCACTGTGCTGTCACATATGACAGGAAGGCCATTGTGATTAATGGGCAGAGAAGAATCCTAATTTCTGGGTCTATACATTACCCCAGAAGCACTCCTGAGATGTGGGAAGATCTGATTCAGAAGGCAAAAGATGGAGGGCTTGATGTGGTTGAAACCTATGTGTTCTGGAATGTGCATGAGCCTACTCCTGGCAATTACAATTTTGAAGGGAGGTATGATCTGGTGAGGTTCCTCAAGACCATACAGAAGGCAGGGCTCTATGCCCACCTTCGCATTGGCCCTTATGTTTGCGCTGAGTGGAACTTTGGGGGTTTTCCTGTTTGGCTGAAGTATGTTCCAGGCATCAGCTTCAGAACAGACAATGAACCTTTCAAGAGGGCAATGCAAGGGTTCACACAAAAGATTGTGGGACTGATGAAGAGTGAAAGTTTGTTTGAGTCTCAGGGTGGTCCCATCATACTCTCTCAGATTGAGAATGAGTATGGAGCGCAGAGTAAGTTATTCGGAGCTGCTGGCCATAATTACATTACTTGGGCCGCAGAAATGGCGGTTGGGTTGGACACCGGAGTGCCATGGGTGATGTGCAAGGAAGAAGATGCACCAGATCCAGTGATAAACACTTGTAACGGTTTCTACTGCGATTCTTTCTCTCCCAACAGACCCTATAAGCCTACGATTTGGACAGAGACATGGAGTGGCTGGTTTACGGAGTTTGGCGGTCCAATTCACCAACGACCAGTTCAGGATTTAGCATATGCAGTTGCGACATTCATACAGAAAGGAGATCGATCATTTGTTAACTATTACATGTACCATGGGGGTACCAATTTTGGACGCACAGCCGGGGGCCCTTTCATCACTACCAGCTACGACTATGATGCTCCATTAGATGAATATGGTTTAATCAGGCAGCCAAAGTATGGTCACCTCAAGGAGCTTCACAAGGCTATTAAGATGTGCGAACGGGCTTTAGTATCAGCGGATCCAATCATAACTTCACTGGGGAATTTTCAACAGGCTTATGTGTACACTTCCGAATCAGGAGATTGCTCTGCATTTCTTTCAAACCATGATTCCAAGTCAGCTGCGAGAGTGATGTTTAATAACATGCACTACAACCTGCCTCCTTGGTCCATCAGTATCCTTCCTGATTGCAGAAATGTAGTCTTTAACACTGCAAAGGTTGGAGTTCAAACGTCACAAATGCAAATGTTGCCAACAAATATTCCTATGCTATCATGGGAGAGTTATGATGAACGATCTTACTTCTATGGATGA

Protein Analysis

450

Amino Acids

50.82

Weight (kDa)

6.14

Isoelectric Point (pI)

41.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1200
Acc65I GGTACC 1 cut(s) 893
AccB1I GGYRCC 1 cut(s) 893
AccB7I CCANNNNNTGG 1 cut(s) 992
AciI CCGC 4 cut(s) 609, 620, 789, 1052
AclWI GGATC 3 cut(s) 671, 1049, 1062
AcoI YGGCCR 1 cut(s) 586
AcsI RAATTY 1 cut(s) 1078
AcuI CTGAAG 2 cut(s) 406, 419
AfaI GTAC 3 cut(s) 884, 895, 1100
AfiI CCNNNNNNNGG 2 cut(s) 260, 992
AflIII ACRYGT 1 cut(s) 879
AgsI TTSAA 6 cut(s) 224, 278, 445, 1085, 1137, 1265
AjnI CCWGG 2 cut(s) 259, 409
AjuI GAANNNNNNNTTGG 7 cut(s) 33, 606, 638, 795, 827, 1051, 1083
AleI CACNNNNGTG 1 cut(s) 638
AluBI AGCT 8 cut(s) 17, 25, 67, 420, 581, 939, 1009, 1157
AluI AGCT 8 cut(s) 17, 25, 67, 420, 581, 939, 1009, 1157
Alw26I GTCTC 2 cut(s) 516, 752
AlwI GGATC 3 cut(s) 671, 1049, 1062
AoxI GGCC 5 cut(s) 99, 349, 586, 606, 919
ApaI GGGCCC 1 cut(s) 923
ApeKI GCWGC 4 cut(s) 52, 581, 982, 1157
ApoI RAATTY 1 cut(s) 1078
AseI ATTAAT 1 cut(s) 111
Asp718I GGTACC 1 cut(s) 893
AspLEI GCGC 2 cut(s) 365, 562
AspS9I GGNCC 7 cut(s) 350, 521, 606, 791, 919, 920, 1203
AsuC2I CCSGG 1 cut(s) 916
AsuHPI GGTGA 4 cut(s) 307, 661, 791, 989
AvaII GGWCC 3 cut(s) 521, 791, 1203
BaeGI GKGCMC 1 cut(s) 923
BalI TGGCCA 1 cut(s) 588
BamHI GGATCC 1 cut(s) 1054
BanI GGYRCC 1 cut(s) 893
BanII GRGCYC 2 cut(s) 330, 923
BbvI GCAGC 4 cut(s) 39, 568, 994, 1144
BccI CCATC 3 cut(s) 197, 533, 1214
BcgI CGANNNNNNTGC 2 cut(s) 932, 966
BciT130I CCWGG 2 cut(s) 261, 411
BciVI GTATCC 1 cut(s) 1223
BcnI CCSGG 1 cut(s) 916
BcoDI GTCTC 2 cut(s) 516, 752
BfuAI ACCTGC 1 cut(s) 1200
BfuI GTATCC 1 cut(s) 1223
BglII AGATCT 1 cut(s) 181
BisI GCNGC 5 cut(s) 53, 582, 609, 983, 1158
BlsI GCNGC 5 cut(s) 54, 583, 610, 984, 1159
Bme1390I CCNGG 3 cut(s) 261, 411, 916
Bme18I GGWCC 3 cut(s) 521, 791, 1203
BmgT120I GGNCC 7 cut(s) 350, 521, 606, 791, 919, 920, 1203
BmiI GGNNCC 7 cut(s) 6, 302, 523, 895, 920, 921, 1056
BmrFI CCNGG 3 cut(s) 261, 411, 916
BmrI ACTGGG 1 cut(s) 1082
BmsI GCATC 3 cut(s) 423, 658, 940
BmuI ACTGGG 1 cut(s) 1082
BpuEI CTTGAG 2 cut(s) 290, 986
BpuMI CCSGG 1 cut(s) 916
Bsa29I ATCGAT 1 cut(s) 859
BsaJI CCNNGG 4 cut(s) 644, 886, 915, 1199
BsaWI WCCGGW 1 cut(s) 635
Bsc4I CCNNNNNNNGG 2 cut(s) 260, 992
Bse1I ACTGG 3 cut(s) 680, 809, 1077
Bse3DI GCAATG 1 cut(s) 459
BseBI CCWGG 2 cut(s) 261, 411
BseCI ATCGAT 1 cut(s) 859
BseDI CCNNGG 4 cut(s) 644, 886, 915, 1199
BseLI CCNNNNNNNGG 2 cut(s) 260, 992
BseMI GCAATG 1 cut(s) 459
BseMII CTCAG 5 cut(s) 27, 159, 357, 527, 551
BseNI ACTGG 3 cut(s) 680, 809, 1077
BseSI GKGCMC 1 cut(s) 923
BseXI GCAGC 4 cut(s) 39, 568, 994, 1144
BseYI CCCAGC 2 cut(s) 25, 55
BshFI GGCC 5 cut(s) 101, 351, 588, 608, 921
BshNI GGYRCC 1 cut(s) 893
BshVI ATCGAT 1 cut(s) 859
BsiSI CCGG 2 cut(s) 636, 915
BslFI GGGAC 2 cut(s) 495, 507
BslI CCNNNNNNNGG 2 cut(s) 260, 992
BsmAI GTCTC 2 cut(s) 516, 752
BsmFI GGGAC 2 cut(s) 495, 507
BsnI GGCC 5 cut(s) 101, 351, 588, 608, 921
Bsp120I GGGCCC 1 cut(s) 919
Bsp1286I GDGCHC 2 cut(s) 330, 923
Bsp1407I TGTACA 1 cut(s) 1098
Bsp143I GATC 7 cut(s) 181, 289, 676, 856, 860, 1054, 1331
Bsp19I CCATGG 2 cut(s) 644, 886
BspACI CCGC 4 cut(s) 609, 620, 789, 1052
BspANI GGCC 5 cut(s) 101, 351, 588, 608, 921
BspCNI CTCAG 5 cut(s) 26, 160, 358, 526, 550
BspDI ATCGAT 1 cut(s) 859
BspLI GGNNCC 7 cut(s) 6, 302, 523, 895, 920, 921, 1056
BspMI ACCTGC 1 cut(s) 1200
BspPI GGATC 3 cut(s) 671, 1049, 1062
BspT107I GGYRCC 1 cut(s) 893
BsrDI GCAATG 1 cut(s) 459
BsrGI TGTACA 1 cut(s) 1098
BsrI ACTGG 3 cut(s) 680, 809, 1077
BssECI CCNNGG 4 cut(s) 644, 886, 915, 1199
BssMI GATC 7 cut(s) 181, 289, 676, 856, 860, 1054, 1331
BssT1I CCWWGG 3 cut(s) 644, 886, 1199
Bst2UI CCWGG 2 cut(s) 261, 411
Bst4CI ACNGT 2 cut(s) 77, 701
Bst6I CTCTTC 1 cut(s) 485
BstAPI GCANNNNNTGC 1 cut(s) 1285
BstAUI TGTACA 1 cut(s) 1098
BstC8I GCNNGC 1 cut(s) 586
BstDEI CTNAG 5 cut(s) 13, 168, 366, 513, 537
BstDSI CCRYGG 2 cut(s) 644, 886
BstEII GGTNACC 1 cut(s) 995
BstHHI GCGC 2 cut(s) 365, 562
BstKTI GATC 7 cut(s) 184, 292, 679, 859, 863, 1057, 1334
BstMAI GTCTC 2 cut(s) 516, 752
BstMBI GATC 7 cut(s) 181, 289, 676, 856, 860, 1054, 1331
BstMWI GCNNNNNNNGC 2 cut(s) 617, 1285
BstNI CCWGG 2 cut(s) 261, 411
BstNSI RCATGY 2 cut(s) 883, 1183
BstPI GGTNACC 1 cut(s) 995
BstSCI CCNGG 3 cut(s) 259, 409, 914
BstSLI GKGCMC 1 cut(s) 923
BstV1I GCAGC 4 cut(s) 39, 568, 994, 1144
BstX2I RGATCY 3 cut(s) 181, 676, 1054
BstYI RGATCY 3 cut(s) 181, 676, 1054
Bsu15I ATCGAT 1 cut(s) 859
BsuI GTATCC 1 cut(s) 1223
BsuRI GGCC 5 cut(s) 101, 351, 588, 608, 921
BsuTUI ATCGAT 1 cut(s) 859
BtgI CCRYGG 2 cut(s) 644, 886
BtsI GCAGTG 1 cut(s) 1245
BtsIMutI CAGTG 4 cut(s) 73, 687, 1070, 1245
BveI ACCTGC 1 cut(s) 1200
Cac8I GCNNGC 1 cut(s) 586
CfoI GCGC 2 cut(s) 365, 562
Cfr13I GGNCC 7 cut(s) 350, 521, 606, 791, 919, 920, 1203
ClaI ATCGAT 1 cut(s) 859
CseI GACGC 1 cut(s) 915
Csp6I GTAC 3 cut(s) 883, 894, 1099
CviAII CATG 9 cut(s) 37, 248, 645, 762, 880, 887, 1142, 1180, 1311
CviQI GTAC 3 cut(s) 883, 894, 1099
DdeI CTNAG 5 cut(s) 13, 168, 366, 513, 537
DpnI GATC 7 cut(s) 183, 291, 678, 858, 862, 1056, 1333
DpnII GATC 7 cut(s) 181, 289, 676, 856, 860, 1054, 1331
EaeI YGGCCR 1 cut(s) 586
Eam1104I CTCTTC 1 cut(s) 485
EarI CTCTTC 1 cut(s) 485
Eco130I CCWWGG 3 cut(s) 644, 886, 1199
Eco24I GRGCYC 2 cut(s) 330, 923
Eco47I GGWCC 3 cut(s) 521, 791, 1203
Eco57I CTGAAG 2 cut(s) 406, 419
Eco91I GGTNACC 1 cut(s) 995
EcoO109I RGGNCCY 2 cut(s) 919, 920
EcoO65I GGTNACC 1 cut(s) 995
EcoRII CCWGG 2 cut(s) 259, 409
EcoT14I CCWWGG 3 cut(s) 644, 886, 1199
EcoT38I GRGCYC 2 cut(s) 330, 923
ErhI CCWWGG 3 cut(s) 644, 886, 1199
FaeI CATG 9 cut(s) 40, 251, 648, 765, 883, 890, 1145, 1183, 1314
FaqI GGGAC 2 cut(s) 495, 507
FatI CATG 9 cut(s) 36, 247, 644, 761, 879, 886, 1141, 1179, 1310
FauNDI CATATG 2 cut(s) 88, 826
Fnu4HI GCNGC 5 cut(s) 53, 582, 609, 983, 1158
FriOI GRGCYC 2 cut(s) 330, 923
Fsp4HI GCNGC 5 cut(s) 53, 582, 609, 983, 1158
GlaI GCGC 2 cut(s) 364, 561
GluI GCNGC 5 cut(s) 53, 582, 609, 983, 1158
GsaI CCCAGC 2 cut(s) 29, 59
HaeIII GGCC 5 cut(s) 101, 351, 588, 608, 921
HapII CCGG 2 cut(s) 636, 915
HgaI GACGC 1 cut(s) 915
HhaI GCGC 2 cut(s) 365, 562
Hin1II CATG 9 cut(s) 40, 251, 648, 765, 883, 890, 1145, 1183, 1314
Hin6I GCGC 2 cut(s) 363, 560
HinP1I GCGC 2 cut(s) 363, 560
HincII GTYRAC 1 cut(s) 871
HindII GTYRAC 1 cut(s) 871
HinfI GANTC 6 cut(s) 126, 187, 509, 713, 1109, 1145
HpaI GTTAAC 1 cut(s) 871
HpaII CCGG 2 cut(s) 636, 915
HphI GGTGA 4 cut(s) 307, 661, 791, 989
Hpy166II GTNNAC 6 cut(s) 73, 465, 777, 871, 1099, 1101
Hpy188I TCNGA 6 cut(s) 186, 192, 425, 540, 578, 1108
Hpy188III TCNNGA 7 cut(s) 167, 238, 307, 445, 815, 1113, 1220
Hpy8I GTNNAC 6 cut(s) 73, 465, 777, 871, 1099, 1101
HpyAV CCTTC 6 cut(s) 91, 187, 272, 313, 350, 1226
HpyCH4III ACNGT 2 cut(s) 77, 701
HpyCH4IV ACGT 1 cut(s) 1268
HpyF10VI GCNNNNNNNGC 2 cut(s) 617, 1285
HpyF3I CTNAG 5 cut(s) 13, 168, 366, 513, 537
HpySE526I ACGT 1 cut(s) 1268
Hsp92II CATG 9 cut(s) 40, 251, 648, 765, 883, 890, 1145, 1183, 1314
HspAI GCGC 2 cut(s) 363, 560
KpnI GGTACC 1 cut(s) 897
KspAI GTTAAC 1 cut(s) 871
Kzo9I GATC 7 cut(s) 181, 289, 676, 856, 860, 1054, 1331
LmnI GCTCC 4 cut(s) 557, 578, 958, 1006
Lsp1109I GCAGC 4 cut(s) 39, 568, 994, 1144
LweI GCATC 3 cut(s) 423, 658, 940
MaeII ACGT 1 cut(s) 1268
MaeIII GTNAC 4 cut(s) 82, 695, 995, 1269
MalI GATC 7 cut(s) 183, 291, 678, 858, 862, 1056, 1333
MboI GATC 7 cut(s) 181, 289, 676, 856, 860, 1054, 1331
MboII GAAGA 5 cut(s) 135, 191, 502, 674, 677
MflI RGATCY 3 cut(s) 181, 676, 1054
MhlI GDGCHC 2 cut(s) 330, 923
MlsI TGGCCA 1 cut(s) 588
MluCI AATT 7 cut(s) 132, 265, 271, 592, 795, 898, 1078
MluNI TGGCCA 1 cut(s) 588
MlyI GAGTC 1 cut(s) 518
MmeI TCCRAC 2 cut(s) 609, 1237
MnlI CCTC 7 cut(s) 200, 276, 291, 314, 441, 1010, 1206
Mox20I TGGCCA 1 cut(s) 588
MscI TGGCCA 1 cut(s) 588
MseI TTAA 6 cut(s) 111, 870, 974, 1023, 1173, 1242
MslI CAYNNNNRTG 1 cut(s) 638
Msp20I TGGCCA 1 cut(s) 588
MspA1I CMGCKG 3 cut(s) 67, 1052, 1157
MspI CCGG 2 cut(s) 636, 915
MspR9I CCNGG 3 cut(s) 261, 411, 916
MvaI CCWGG 2 cut(s) 261, 411
MwoI GCNNNNNNNGC 2 cut(s) 617, 1285
NciI CCSGG 1 cut(s) 916
NcoI CCATGG 2 cut(s) 644, 886
NdeI CATATG 2 cut(s) 88, 826
NdeII GATC 7 cut(s) 181, 289, 676, 856, 860, 1054, 1331
NlaIII CATG 9 cut(s) 40, 251, 648, 765, 883, 890, 1145, 1183, 1314
NlaIV GGNNCC 7 cut(s) 6, 302, 523, 895, 920, 921, 1056
NmuCI GTSAC 3 cut(s) 82, 995, 1269
NspI RCATGY 2 cut(s) 883, 1183
OliI CACNNNNGTG 1 cut(s) 638
PciI ACATGT 1 cut(s) 879
PfeI GAWTC 5 cut(s) 126, 187, 713, 1109, 1145
PflMI CCANNNNNTGG 1 cut(s) 992
PkrI GCNGC 5 cut(s) 54, 583, 610, 984, 1159
PleI GAGTC 1 cut(s) 517
PpsI GAGTC 1 cut(s) 517
PscI ACATGT 1 cut(s) 879
PshBI ATTAAT 1 cut(s) 111
Psp6I CCWGG 2 cut(s) 259, 409
PspEI GGTNACC 1 cut(s) 995
PspFI CCCAGC 2 cut(s) 25, 55
PspGI CCWGG 2 cut(s) 259, 409
PspN4I GGNNCC 7 cut(s) 6, 302, 523, 895, 920, 921, 1056
PspOMI GGGCCC 1 cut(s) 919
PspPI GGNCC 7 cut(s) 350, 521, 606, 791, 919, 920, 1203
PsuI RGATCY 3 cut(s) 181, 676, 1054
PvuII CAGCTG 2 cut(s) 67, 1157
RsaI GTAC 3 cut(s) 884, 895, 1100
RsaNI GTAC 3 cut(s) 883, 894, 1099
RseI CAYNNNNRTG 1 cut(s) 638
SaqAI TTAA 6 cut(s) 111, 870, 974, 1023, 1173, 1242
SatI GCNGC 5 cut(s) 53, 582, 609, 983, 1158
Sau3AI GATC 7 cut(s) 181, 289, 676, 856, 860, 1054, 1331
Sau96I GGNCC 7 cut(s) 350, 521, 606, 791, 919, 920, 1203
SchI GAGTC 1 cut(s) 518
ScrFI CCNGG 3 cut(s) 261, 411, 916
SduI GDGCHC 2 cut(s) 330, 923
SfaNI GCATC 3 cut(s) 423, 658, 940
SinI GGWCC 3 cut(s) 521, 791, 1203
SmiMI CAYNNNNRTG 1 cut(s) 638
SmlI CTYRAG 2 cut(s) 305, 1001
SmoI CTYRAG 2 cut(s) 305, 1001
Sse9I AATT 7 cut(s) 132, 265, 271, 592, 795, 898, 1078
SsiI CCGC 4 cut(s) 609, 620, 789, 1052
SspI AATATT 1 cut(s) 1297
StyD4I CCNGG 3 cut(s) 259, 409, 914
StyI CCWWGG 3 cut(s) 644, 886, 1199
TaaI ACNGT 2 cut(s) 77, 701
TaiI ACGT 1 cut(s) 1271
TaqI TCGA 1 cut(s) 859
TasI AATT 7 cut(s) 132, 265, 271, 592, 795, 898, 1078
TatI WGTACW 1 cut(s) 1098
TauI GCSGC 1 cut(s) 611
TfiI GAWTC 5 cut(s) 126, 187, 713, 1109, 1145
Tru1I TTAA 6 cut(s) 111, 870, 974, 1023, 1173, 1242
Tru9I TTAA 6 cut(s) 111, 870, 974, 1023, 1173, 1242
TscAI CASTG 4 cut(s) 80, 687, 1077, 1252
TseFI GTSAC 3 cut(s) 82, 995, 1269
TseI GCWGC 4 cut(s) 52, 581, 982, 1157
Tsp45I GTSAC 3 cut(s) 82, 995, 1269
TspDTI ATGAA 7 cut(s) 25, 450, 503, 832, 916, 978, 1341
TspGWI ACGGA 1 cut(s) 794
TspRI CASTG 4 cut(s) 80, 687, 1077, 1252
Van91I CCANNNNNTGG 1 cut(s) 992
VpaK11BI GGWCC 3 cut(s) 521, 791, 1203
VspI ATTAAT 1 cut(s) 111
XapI RAATTY 1 cut(s) 1078
XceI RCATGY 2 cut(s) 883, 1183
XcmI CCANNNNNNNNNTGG 1 cut(s) 344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.