Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0001965

Physical Location & Seq

Genomic Coordinates Forward (+)

18393864 .. 18400352

Gene Structure 6489 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG130400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGGGAGCTAGCTCAGCTTTGAGCTGGGTTCTGCTCTGCTTAGTTGTGTTGTCTCTACGTTTTCAGCTGATACAGTGCAATGTTAGCTATGACAGGAAGGCTCTTATCATTAATGGGCAGAGGAGATTTCTCTTTTCTGGGTCCATACACTATCCTAGAAGTACTCCTGAGATGTGGGAAGGTCTTATAGAGAAGGCCAAAGATGGTGGGTTGGATGTTATAGACACCTATGTGTTTTGGAATCTTCATGAGCCATCTCCTGGCAATTACAATTTTGAAGGGAGAAATGATTTGGTTCGCTTCATTAAGTTAGTCCAAGAGGCACGGCTCTATGTGCATCTTCGCATTGGACCGTACATTTGCTCAGAATGGAATTTTGGGGGATTTCCAGTTTGGCTCAAGTATGTTCCAGGCATTAGCTTCAGAACAGATAATGAGCCTTTCAAGTCAGCAATGAAAAAATTTACCAAGAAGATTGTTCAATTGATGATGCATGAAAAGCTATTTGAGTCCCAAGGTGGCCCCATTATCCTTTCTCAGATTGAGAATGAATATGAGCCAGAAAGCAAGCTTTTTGGTGCTGCTGGTCATGCATACATGACTTGGGCTGCAGAGATGGCTGTTGGAATGGGTACTGGTGTTCCATGGGTCATGTGCAAGGAAGAGGATGCCCCAGACCCAGTGATAAACACTTGCAATGGTTTTTATTGCGACTACTTTTCTCCAAACAAACCATATAAACCCACACTTTGGACTGAGGCTTGGACTGGCTGGTTTACAGAATTTGGTGGCCCAATTTACAAGCGACCTGTTGAAGATTTGGCGTTTGGAGTTGCCCGATTCATTCAGAATGGAGGATCCTTCATAAATTATTACATGTACCATGGAGGAACAAACTTTGGAAGAACTGCAGGAGGTCCATTTATTACTACCAGTTATGACTATGATGCTCCCATTGACGAATATGGCTTGATCAGGCAACCTAAATATGGCCATTTAAAGGAACTCCATAAGGCTGTTAAGTTATGTGAGCAAGCTCTGCTAAACACTGATTCTACTGTTACATCCTTGGGGACTTATGAACAGGCACACGTATTCTCTTCCAAGTCAGGAGATTGTGCAGCTTTTCTCTCAAATTACAATACAAAGTCAGCTGCAACTGTGACTTTCAATCAGATGAACTACCACCTCCCACCTTGGTCCATCAGCATCTTGCCAGATTGTAAAAATGTTGTATACAACACTGCCCAAGTGGGAGTTCAAACATCCCAAAAACAGTTTTTTCCTACTAACTCTAAGTTGCGCTCATGGGAAACCTTCAGTGAAGACATCTCTTCAGTTGCTAGCAATACGAAACTCATGGTAATTGGTCTCTTAGATCAGTTGAACATCACCAGAGACTTCAGTGATTACTTATGGTACACAACCAATATCGACATTAAATCATCTGAATCATTTCTACGTGGCGGTCAACATCCAACTCTGACCGTGCAATCAGCTGGTGATGCTATGCATGTCTTTATCAATGGGCAGCTCTCAGGATCGGCGTATGGGACTAGGAAAAACAAGAGATTCACTTTTACAGGAAATGTCATCCTGCATGCTGGATTGAATAAAATCTCACTTCTCAGTATAGCTGTTGGATTGCCGAACAATGGTCCTCACTTTGAGACACGGAATGCTGGAGTACTGGGACCAGTTGCTCTACATGGACTAGACCAAGGAAGCAGAGACTTATCATGGCAGAAATGGTCACACAAGGTGGGCCTAAAAGGAGAAGCCATGAACCTGGGTTCTCCAAGTTCCATCTCGACAGTGGATTGGACGAGGGTGTCCTTAGCGGCGAAGAATCAACAGCCACTGACATGGTTTAAGGTCAATTTTGATGCACCTGAAGGAGATGAACCTTTGGCTTTGGACATGGGAAGTATGGGCAAGGGTCAACTATGGATCAATGGGCAAAGCATTGGAAGATACTGGACTACTTATGCTAATGGGGATTGCAGTGCGTGTAGTTATTCTGGTACCTTCAGGCCTAAGAACAAGTGCCAATATGGTTGTAACCATCCAACTCAACAATGGTACCATGTTCCTAGGTCCTGGTTAAAGCAATCTAAAAACCTATTGGTAGTTTTTGAGGAGATTGGTGGGGATGTATCAAAGATTGCTCTTGTCAAACGTTCAGTGAGCACTGTTTGTGCTGAGGTTTCTGAAAATCACCCACATAATAGGAATTGGCATACTGAGAGCCGTGGCCAACTGGAAGAGCAAAAGAAGCCCATAATGAGCCTACACTGTACGGATGGATACTCCATTTCTGCTATTAAGTTTTCTAGTTTTGGAACTCCATCTGGAAGCTGTGGGAATTTTCAGCACGGTACATGTCGCGCTCCAAACTCGAAGGCTGTCATTGAGAAGGTACTTTTCAGACTGCTCCTAATTATTGCAGTTGAGGTCAAATTTTCCCAGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0009505 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal_Lectin Glyco_hydro_35

Protein Analysis

824

Amino Acids

92.2

Weight (kDa)

8.46

Isoelectric Point (pI)

39.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	35 - 339	2.5e-122	Glycosyl hydrolases family 35
GHD	PF17834	362 - 418	4e-25	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	471 - 538	1.8e-08	Beta-galactosidase, galactose-binding domain
BetaGal_gal-bd	PF21467	621 - 707	3.9e-26	Beta-galactosidase, galactose-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36360 AT4G36360
fragaria_vesca	FvH4_1g12350 FvH4_1g12350 FvH4_1g12350 FvH4_1g12350 FvH4_2g09820 FvH4_2g09820
malus_domestica	MD02G1137500.v1.1 MD10G1067800.v1.1 MD15G1251100.v1.1
prunus_persica	Prupe.7G163100_v2.0.a1 Prupe.7G163100_v2.0.a1 Prupe.7G163100_v2.0.a1 Prupe.7G163100_v2.0.a1 Prupe.7G163100_v2.0.a1 Prupe.7G163100_v2.0.a1 Prupe.8G089500_v2.0.a1 Prupe.8G089500_v2.0.a1
pyrus_communis	pycom02g10880 pycom10g05360 pycom15g22140
rosa_chinensis	RchiOBHm_Chr2g0100171 RchiOBHm_Chr6g0266171
rosa_laevigata	RLG00000014106 RLG00000014109 RLG00000016943
rosa_multiflora	Rmu_sc0002547.1_g000001
rosa_roxburghii	Rroxscaffold_174G00435340 Rroxscaffold_2G00142500 Rroxscaffold_7G00201780 Rroxscaffold_7G00201840
rosa_rugosa	Rorug02G0086200 Rorug06G0024500 Rorug06G0024900 Rorug06G0025000
rosa_samantha	Rh2AG135300 Rh2CG140500 Rh2DG140700 Rh6BG145900 Rh6CG142300 Rh6DG130400
rosa_wichuraiana	Rw2G010560 Rw6G012540 Rw6G012580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1831
Acc65I	GGTACC	2 cut(s)	2024, 2082
AccB1I	GGYRCC	2 cut(s)	2024, 2082
AccB7I	CCANNNNNTGG	2 cut(s)	260, 750
AccI	GTMKAC	1 cut(s)	1236
AccII	CGCG	1 cut(s)	2388
AciI	CCGC	2 cut(s)	1467, 1841
AclI	AACGTT	1 cut(s)	2179
AclWI	GGATC	4 cut(s)	852, 865, 1549, 1958
AcoI	YGGCCR	2 cut(s)	991, 2254
AcsI	RAATTY	5 cut(s)	373, 461, 782, 2365, 2459
AcuI	CTGAAG	6 cut(s)	406, 1303, 1320, 1387, 1914, 2014
AdeI	CACNNNGTG	1 cut(s)	1762
AfiI	CCNNNNNNNGG	5 cut(s)	260, 750, 989, 1000, 1655
AflIII	ACRYGT	3 cut(s)	876, 1090, 2381
AgsI	TTSAA	8 cut(s)	278, 445, 482, 815, 1171, 1262, 1387, 1612
AjnI	CCWGG	4 cut(s)	259, 409, 1788, 2099
AjuI	GAANNNNNNNTTGG	4 cut(s)	360, 392, 1242, 1274
AleI	CACNNNNGTG	1 cut(s)	230
Alw21I	GWGCWC	1 cut(s)	2192
Alw26I	GTCTC	5 cut(s)	57, 1376, 1392, 1664, 1725
AlwI	GGATC	4 cut(s)	852, 865, 1549, 1958
AlwNI	CAGNNNCTG	1 cut(s)	1861
AoxI	GGCC	7 cut(s)	195, 520, 790, 991, 1765, 2033, 2254
ApeKI	GCWGC	5 cut(s)	581, 608, 1121, 1154, 1531
ApoI	RAATTY	5 cut(s)	373, 461, 782, 2365, 2459
ArsI	GACNNNNNNTTYG	2 cut(s)	342, 374
AseI	ATTAAT	1 cut(s)	111
Asp700I	GAANNNNTTC	1 cut(s)	1455
Asp718I	GGTACC	2 cut(s)	2024, 2082
AspA2I	CCTAGG	1 cut(s)	2093
AspLEI	GCGC	2 cut(s)	1305, 2390
AsuHPI	GGTGA	3 cut(s)	1384, 1514, 2210
AsuNHI	GCTAGC	2 cut(s)	8, 1343
AvaII	GGWCC	7 cut(s)	141, 350, 917, 1200, 1658, 1694, 2097
AvrII	CCTAGG	1 cut(s)	2093
BaeI	ACNNNNGTAYC	4 cut(s)	624, 657, 2066, 2099
BalI	TGGCCA	2 cut(s)	993, 2256
BamHI	GGATCC	1 cut(s)	857
BanI	GGYRCC	2 cut(s)	2024, 2082
BbsI	GAAGAC	1 cut(s)	1332
Bbv12I	GWGCWC	1 cut(s)	2192
BbvCI	CCTCAGC	1 cut(s)	2202
BbvI	GCAGC	5 cut(s)	568, 595, 1133, 1141, 1543
BccI	CCATC	8 cut(s)	197, 262, 610, 1211, 1814, 2073, 2297, 2356
BceAI	ACGGC	2 cut(s)	341, 2235
BciT130I	CCWGG	4 cut(s)	261, 411, 1790, 2101
BciVI	GTATCC	1 cut(s)	2300
BclI	TGATCA	1 cut(s)	972
BcoDI	GTCTC	5 cut(s)	57, 1376, 1392, 1664, 1725
BfaI	CTAG	7 cut(s)	9, 156, 1344, 1557, 1715, 2094, 2334
BfmI	CTRYAG	2 cut(s)	609, 909
BfuI	GTATCC	1 cut(s)	2300
BisI	GCNGC	6 cut(s)	582, 609, 1122, 1155, 1532, 1842
BlnI	CCTAGG	1 cut(s)	2093
BlpI	GCTNAGC	1 cut(s)	13
BlsI	GCNGC	6 cut(s)	583, 610, 1123, 1156, 1533, 1843
BmcAI	AGTACT	2 cut(s)	163, 1689
Bme1390I	CCNGG	4 cut(s)	261, 411, 1790, 2101
Bme18I	GGWCC	7 cut(s)	141, 350, 917, 1200, 1658, 1694, 2097
BmiI	GGNNCC	6 cut(s)	142, 523, 859, 1695, 2026, 2084
BmrFI	CCNGG	4 cut(s)	261, 411, 1790, 2101
BmrI	ACTGGG	3 cut(s)	674, 1700, 2461
BmsI	GCATC	7 cut(s)	346, 480, 658, 937, 1218, 1495, 1876
BmtI	GCTAGC	2 cut(s)	12, 1347
BmuI	ACTGGG	3 cut(s)	674, 1700, 2461
BpiI	GAAGAC	1 cut(s)	1332
BpmI	CTGGAG	1 cut(s)	1704
Bpu10I	CCTNAGC	2 cut(s)	1837, 2202
Bpu1102I	GCTNAGC	1 cut(s)	13
BpuEI	CTTGAG	1 cut(s)	383
BsaAI	YACGTR	2 cut(s)	1093, 1463
BsaI	GGTCTC	1 cut(s)	1376
BsaJI	CCNNGG	9 cut(s)	514, 644, 883, 1068, 1196, 1720, 1789, 2093, 2251
Bsc4I	CCNNNNNNNGG	5 cut(s)	260, 750, 989, 1000, 1655
Bse3DI	GCAATG	3 cut(s)	85, 459, 703
BseBI	CCWGG	4 cut(s)	261, 411, 1790, 2101
BseDI	CCNNGG	9 cut(s)	514, 644, 883, 1068, 1196, 1720, 1789, 2093, 2251
BseGI	GGATG	9 cut(s)	220, 673, 1064, 1265, 1474, 1593, 2065, 2158, 2308
BseLI	CCNNNNNNNGG	5 cut(s)	260, 750, 989, 1000, 1655
BseMI	GCAATG	3 cut(s)	85, 459, 703
BseMII	CTCAG	9 cut(s)	27, 159, 378, 551, 747, 1551, 1642, 2193, 2235
BseRI	GAGGAG	2 cut(s)	136, 2153
BseXI	GCAGC	5 cut(s)	568, 595, 1133, 1141, 1543
BseYI	CCCAGC	1 cut(s)	24
BsgI	GTGCAG	1 cut(s)	1140
Bsh1236I	CGCG	1 cut(s)	2388
BshFI	GGCC	7 cut(s)	197, 522, 792, 993, 1767, 2035, 2256
BshNI	GGYRCC	2 cut(s)	2024, 2082
BsiHKAI	GWGCWC	1 cut(s)	2192
BslFI	GGGAC	4 cut(s)	496, 1087, 1567, 1707
BslI	CCNNNNNNNGG	5 cut(s)	260, 750, 989, 1000, 1655
BsmAI	GTCTC	5 cut(s)	57, 1376, 1392, 1664, 1725
BsmFI	GGGAC	4 cut(s)	496, 1087, 1567, 1707
BsmI	GAATGC	1 cut(s)	1684
BsnI	GGCC	7 cut(s)	197, 522, 792, 993, 1767, 2035, 2256
Bso31I	GGTCTC	1 cut(s)	1376
Bsp1286I	GDGCHC	1 cut(s)	2192
Bsp143I	GATC	5 cut(s)	857, 972, 1378, 1541, 1950
Bsp1720I	GCTNAGC	1 cut(s)	13
Bsp19I	CCATGG	2 cut(s)	644, 883
BspACI	CCGC	2 cut(s)	1467, 1841
BspANI	GGCC	7 cut(s)	197, 522, 792, 993, 1767, 2035, 2256
BspCNI	CTCAG	9 cut(s)	26, 160, 377, 550, 748, 1550, 1641, 2194, 2236
BspFNI	CGCG	1 cut(s)	2388
BspHI	TCATGA	1 cut(s)	247
BspLI	GGNNCC	6 cut(s)	142, 523, 859, 1695, 2026, 2084
BspMAI	CTGCAG	2 cut(s)	613, 913
BspOI	GCTAGC	2 cut(s)	12, 1347
BspPI	GGATC	4 cut(s)	852, 865, 1549, 1958
BspQI	GCTCTTC	1 cut(s)	2259
BspT107I	GGYRCC	2 cut(s)	2024, 2082
BspTNI	GGTCTC	1 cut(s)	1376
BsrDI	GCAATG	3 cut(s)	85, 459, 703
BssECI	CCNNGG	9 cut(s)	514, 644, 883, 1068, 1196, 1720, 1789, 2093, 2251
BssMI	GATC	5 cut(s)	857, 972, 1378, 1541, 1950
BssNAI	GTATAC	1 cut(s)	1237
BssT1I	CCWWGG	7 cut(s)	514, 644, 883, 1068, 1196, 1720, 2093
Bst1107I	GTATAC	1 cut(s)	1237
Bst2UI	CCWGG	4 cut(s)	261, 411, 1790, 2101
Bst6I	CTCTTC	4 cut(s)	657, 1105, 1339, 2259
BstAPI	GCANNNNNTGC	1 cut(s)	1039
BstBAI	YACGTR	2 cut(s)	1093, 1463
BstC8I	GCNNGC	5 cut(s)	10, 569, 1035, 1345, 1602
BstDSI	CCRYGG	3 cut(s)	644, 883, 2251
BstF5I	GGATG	9 cut(s)	220, 673, 1064, 1265, 1474, 1593, 2065, 2158, 2308
BstFNI	CGCG	1 cut(s)	2388
BstHHI	GCGC	2 cut(s)	1305, 2390
BstKTI	GATC	5 cut(s)	860, 975, 1381, 1544, 1953
BstMAI	GTCTC	5 cut(s)	57, 1376, 1392, 1664, 1725
BstMBI	GATC	5 cut(s)	857, 972, 1378, 1541, 1950
BstMWI	GCNNNNNNNGC	9 cut(s)	14, 84, 334, 499, 590, 617, 1039, 1505, 2275
BstNI	CCWGG	4 cut(s)	261, 411, 1790, 2101
BstNSI	RCATGY	4 cut(s)	880, 1517, 1604, 2385
BstSCI	CCNGG	4 cut(s)	259, 409, 1788, 2099
BstSFI	CTRYAG	2 cut(s)	609, 909
BstUI	CGCG	1 cut(s)	2388
BstV1I	GCAGC	5 cut(s)	568, 595, 1133, 1141, 1543
BstV2I	GAAGAC	1 cut(s)	1332
BstX2I	RGATCY	1 cut(s)	857
BstXI	CCANNNNNNTGG	2 cut(s)	1789, 1866
BstYI	RGATCY	1 cut(s)	857
BstZ17I	GTATAC	1 cut(s)	1237
BsuI	GTATCC	1 cut(s)	2300
BsuRI	GGCC	7 cut(s)	197, 522, 792, 993, 1767, 2035, 2256
BtgI	CCRYGG	3 cut(s)	644, 883, 2251
BtsCI	GGATG	9 cut(s)	220, 673, 1064, 1265, 1474, 1593, 2065, 2158, 2308
BtsI	GCAGTG	2 cut(s)	1242, 2011
Cac8I	GCNNGC	5 cut(s)	10, 569, 1035, 1345, 1602
CaiI	CAGNNNCTG	1 cut(s)	1861
CciI	TCATGA	1 cut(s)	247
CfoI	GCGC	2 cut(s)	1305, 2390
CspCI	CAANNNNNGTGG	2 cut(s)	187, 222
DpnI	GATC	5 cut(s)	859, 974, 1380, 1543, 1952
DpnII	GATC	5 cut(s)	857, 972, 1378, 1541, 1950
DraI	TTTAAA	1 cut(s)	999
DraIII	CACNNNGTG	1 cut(s)	1762
DrdI	GACNNNNNNGTC	1 cut(s)	1831
DseDI	GACNNNNNNGTC	1 cut(s)	1831
EaeI	YGGCCR	2 cut(s)	991, 2254
Eam1104I	CTCTTC	4 cut(s)	657, 1105, 1339, 2259
EarI	CTCTTC	4 cut(s)	657, 1105, 1339, 2259
Eco130I	CCWWGG	7 cut(s)	514, 644, 883, 1068, 1196, 1720, 2093
Eco147I	AGGCCT	1 cut(s)	2035
Eco31I	GGTCTC	1 cut(s)	1376
Eco47I	GGWCC	7 cut(s)	141, 350, 917, 1200, 1658, 1694, 2097
Eco57I	CTGAAG	6 cut(s)	406, 1303, 1320, 1387, 1914, 2014
EcoO109I	RGGNCCY	1 cut(s)	2097
EcoRII	CCWGG	4 cut(s)	259, 409, 1788, 2099
EcoT14I	CCWWGG	7 cut(s)	514, 644, 883, 1068, 1196, 1720, 2093
EcoT22I	ATGCAT	3 cut(s)	495, 595, 1515
ErhI	CCWWGG	7 cut(s)	514, 644, 883, 1068, 1196, 1720, 2093
FaqI	GGGAC	4 cut(s)	496, 1087, 1567, 1707
FbaI	TGATCA	1 cut(s)	972
FblI	GTMKAC	1 cut(s)	1236
Fnu4HI	GCNGC	6 cut(s)	582, 609, 1122, 1155, 1532, 1842
FokI	GGATG	9 cut(s)	227, 680, 1051, 1252, 1461, 1580, 2052, 2165, 2315
Fsp4HI	GCNGC	6 cut(s)	582, 609, 1122, 1155, 1532, 1842
FspBI	CTAG	7 cut(s)	9, 156, 1344, 1557, 1715, 2094, 2334
GlaI	GCGC	2 cut(s)	1304, 2389
GluI	GCNGC	6 cut(s)	582, 609, 1122, 1155, 1532, 1842
GsaI	CCCAGC	1 cut(s)	28
GsuI	CTGGAG	1 cut(s)	1704
HaeIII	GGCC	7 cut(s)	197, 522, 792, 993, 1767, 2035, 2256
HhaI	GCGC	2 cut(s)	1305, 2390
Hin6I	GCGC	2 cut(s)	1303, 2388
HinP1I	GCGC	2 cut(s)	1303, 2388
HincII	GTYRAC	2 cut(s)	1472, 1943
HindII	GTYRAC	2 cut(s)	1472, 1943
HindIII	AAGCTT	1 cut(s)	569
HinfI	GANTC	7 cut(s)	241, 509, 840, 1052, 1451, 1572, 1849
HphI	GGTGA	3 cut(s)	1384, 1514, 2210
Hpy166II	GTNNAC	5 cut(s)	777, 1237, 1422, 1472, 1943
Hpy188I	TCNGA	9 cut(s)	367, 425, 540, 849, 1176, 1450, 1485, 2212, 2429
Hpy188III	TCNNGA	6 cut(s)	167, 248, 1110, 1539, 1810, 2352
Hpy8I	GTNNAC	5 cut(s)	777, 1237, 1422, 1472, 1943
HpyCH4IV	ACGT	4 cut(s)	58, 1092, 1462, 2179
HpyF10VI	GCNNNNNNNGC	9 cut(s)	14, 84, 334, 499, 590, 617, 1039, 1505, 2275
HpySE526I	ACGT	4 cut(s)	58, 1092, 1462, 2179
HspAI	GCGC	2 cut(s)	1303, 2388
KpnI	GGTACC	2 cut(s)	2028, 2086
Ksp22I	TGATCA	1 cut(s)	972
Kzo9I	GATC	5 cut(s)	857, 972, 1378, 1541, 1950
LguI	GCTCTTC	1 cut(s)	2259
LmnI	GCTCC	4 cut(s)	5, 955, 2395, 2439
Lsp1109I	GCAGC	5 cut(s)	568, 595, 1133, 1141, 1543
LweI	GCATC	7 cut(s)	346, 480, 658, 937, 1218, 1495, 1876
MaeI	CTAG	7 cut(s)	9, 156, 1344, 1557, 1715, 2094, 2334
MaeII	ACGT	4 cut(s)	58, 1092, 1462, 2179
MaeIII	GTNAC	4 cut(s)	1060, 1162, 1752, 2060
MalI	GATC	5 cut(s)	859, 974, 1380, 1543, 1952
MboI	GATC	5 cut(s)	857, 972, 1378, 1541, 1950
MfeI	CAATTG	1 cut(s)	482
MflI	RGATCY	1 cut(s)	857
MhlI	GDGCHC	1 cut(s)	2192
MlsI	TGGCCA	2 cut(s)	993, 2256
MluNI	TGGCCA	2 cut(s)	993, 2256
MlyI	GAGTC	1 cut(s)	518
MmeI	TCCRAC	5 cut(s)	192, 604, 1502, 1621, 2093
Mox20I	TGGCCA	2 cut(s)	993, 2256
Mph1103I	ATGCAT	3 cut(s)	495, 595, 1515
MroXI	GAANNNNTTC	1 cut(s)	1455
MscI	TGGCCA	2 cut(s)	993, 2256
MseI	TTAA	9 cut(s)	111, 306, 998, 1020, 1440, 1872, 2105, 2325, 2473
MslI	CAYNNNNRTG	2 cut(s)	230, 1864
Msp20I	TGGCCA	2 cut(s)	993, 2256
MspA1I	CMGCKG	3 cut(s)	67, 1154, 1499
MspR9I	CCNGG	4 cut(s)	261, 411, 1790, 2101
MunI	CAATTG	1 cut(s)	482
Mva1269I	GAATGC	1 cut(s)	1684
MvaI	CCWGG	4 cut(s)	261, 411, 1790, 2101
MvnI	CGCG	1 cut(s)	2388
MwoI	GCNNNNNNNGC	9 cut(s)	14, 84, 334, 499, 590, 617, 1039, 1505, 2275
NcoI	CCATGG	2 cut(s)	644, 883
NdeII	GATC	5 cut(s)	857, 972, 1378, 1541, 1950
NheI	GCTAGC	2 cut(s)	8, 1343
NlaIV	GGNNCC	6 cut(s)	142, 523, 859, 1695, 2026, 2084
NmuCI	GTSAC	2 cut(s)	1162, 1752
NsiI	ATGCAT	3 cut(s)	495, 595, 1515
NspI	RCATGY	4 cut(s)	880, 1517, 1604, 2385
OliI	CACNNNNGTG	1 cut(s)	230
PaeI	GCATGC	1 cut(s)	1604
PagI	TCATGA	1 cut(s)	247
PceI	AGGCCT	1 cut(s)	2035
PciI	ACATGT	2 cut(s)	876, 2381
PciSI	GCTCTTC	1 cut(s)	2259
PctI	GAATGC	1 cut(s)	1684
PdmI	GAANNNNTTC	1 cut(s)	1455
PfeI	GAWTC	6 cut(s)	241, 840, 1052, 1451, 1572, 1849
PflMI	CCANNNNNTGG	2 cut(s)	260, 750
PkrI	GCNGC	6 cut(s)	583, 610, 1123, 1156, 1533, 1843
PleI	GAGTC	1 cut(s)	517
PpsI	GAGTC	1 cut(s)	517
Ppu21I	YACGTR	2 cut(s)	1093, 1463
PpuMI	RGGWCCY	1 cut(s)	2097
PscI	ACATGT	2 cut(s)	876, 2381
PshBI	ATTAAT	1 cut(s)	111
Psp1406I	AACGTT	1 cut(s)	2179
Psp5II	RGGWCCY	1 cut(s)	2097
Psp6I	CCWGG	4 cut(s)	259, 409, 1788, 2099
PspFI	CCCAGC	1 cut(s)	24
PspGI	CCWGG	4 cut(s)	259, 409, 1788, 2099
PspN4I	GGNNCC	6 cut(s)	142, 523, 859, 1695, 2026, 2084
PspPPI	RGGWCCY	1 cut(s)	2097
PstI	CTGCAG	2 cut(s)	613, 913
PstNI	CAGNNNCTG	1 cut(s)	1861
PsuI	RGATCY	1 cut(s)	857
PvuII	CAGCTG	3 cut(s)	67, 1154, 1499
RseI	CAYNNNNRTG	2 cut(s)	230, 1864
SapI	GCTCTTC	1 cut(s)	2259
SaqAI	TTAA	9 cut(s)	111, 306, 998, 1020, 1440, 1872, 2105, 2325, 2473
SatI	GCNGC	6 cut(s)	582, 609, 1122, 1155, 1532, 1842
Sau3AI	GATC	5 cut(s)	857, 972, 1378, 1541, 1950
ScaI	AGTACT	2 cut(s)	163, 1689
SchI	GAGTC	1 cut(s)	518
ScrFI	CCNGG	4 cut(s)	261, 411, 1790, 2101
SduI	GDGCHC	1 cut(s)	2192
SfaNI	GCATC	7 cut(s)	346, 480, 658, 937, 1218, 1495, 1876
SfcI	CTRYAG	2 cut(s)	609, 909
SinI	GGWCC	7 cut(s)	141, 350, 917, 1200, 1658, 1694, 2097
SmiMI	CAYNNNNRTG	2 cut(s)	230, 1864
SmlI	CTYRAG	1 cut(s)	398
SmoI	CTYRAG	1 cut(s)	398
SphI	GCATGC	1 cut(s)	1604
SseBI	AGGCCT	1 cut(s)	2035
SsiI	CCGC	2 cut(s)	1467, 1841
SspMI	CTAG	7 cut(s)	9, 156, 1344, 1557, 1715, 2094, 2334
StuI	AGGCCT	1 cut(s)	2035
StyD4I	CCNGG	4 cut(s)	259, 409, 1788, 2099
StyI	CCWWGG	7 cut(s)	514, 644, 883, 1068, 1196, 1720, 2093
TaiI	ACGT	4 cut(s)	61, 1095, 1465, 2182
TaqI	TCGA	3 cut(s)	1434, 1811, 2399
TatI	WGTACW	2 cut(s)	161, 1687
TauI	GCSGC	1 cut(s)	1844
TfiI	GAWTC	6 cut(s)	241, 840, 1052, 1451, 1572, 1849
Tru1I	TTAA	9 cut(s)	111, 306, 998, 1020, 1440, 1872, 2105, 2325, 2473
Tru9I	TTAA	9 cut(s)	111, 306, 998, 1020, 1440, 1872, 2105, 2325, 2473
TseFI	GTSAC	2 cut(s)	1162, 1752
TseI	GCWGC	5 cut(s)	581, 608, 1121, 1154, 1531
Tsp45I	GTSAC	2 cut(s)	1162, 1752
TspGWI	ACGGA	2 cut(s)	1690, 2315
Van91I	CCANNNNNTGG	2 cut(s)	260, 750
VpaK11BI	GGWCC	7 cut(s)	141, 350, 917, 1200, 1658, 1694, 2097
VspI	ATTAAT	1 cut(s)	111
XapI	RAATTY	5 cut(s)	373, 461, 782, 2365, 2459
XceI	RCATGY	4 cut(s)	880, 1517, 1604, 2385
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1813, 2076
XmaJI	CCTAGG	1 cut(s)	2093
XmiI	GTMKAC	1 cut(s)	1236
XmnI	GAANNNNTTC	1 cut(s)	1455
XspI	CTAG	7 cut(s)	9, 156, 1344, 1557, 1715, 2094, 2334
ZrmI	AGTACT	2 cut(s)	163, 1689
Zsp2I	ATGCAT	3 cut(s)	495, 595, 1515

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.