Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001965

Physical Location & Seq

Genomic Coordinates Reverse (-)

3083897 .. 3089278

Gene Structure 5382 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0024900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2868 bp

ATGGCCGATTCTGGAGCTAACCCTAAACAGAGACAACCCAAGAAGAACAAGAAGAAGAGAAAGCAGAGCGGACCCCAAGAATCTGAAAGGCCACCCAAAACTAACCGCACCAATTCATCAGAGAACGAGAATGAACCACAAGACCAAAACTTTGAAGTTGGAAAAGCTGAAAAACCCAATCAAGGTGGTCCATGGAGGAACCTGGAGTTGATTCTGTCAATCCAGAACAGAGAGCTTGATCTTCACAAGAAGGTGGAACTAGCTCATGGTTTTGTGATGTCGAGGGTGAAGGAAGAAGGAGGCAGCAGTGATGAGGATAATCAAGCAGTGAACATGTCACGTTTAGTAATTTTTGTCAGTGATTGGATCCAGTCATTGTTGATTTCCGAAGGAAAGAAAGTTGAGAGTGGTGGAGAGAAGCATCAAGCTGAAGTTATTTATACGTTTTTAAGGGCTCACGCTCGGAAAGATGGATTTCGTGATTTTAGTAATAAGCTCCTTGAACCTCTGTTGCATCTCTTGGGTCTCTTGCATCTCCAGATTGGTGGAAGTAATCCTGGTTGGAGAAGAAACTTACTGAAGCTTGTTGAAGATGTATTATCTCATGGGCTATATCACCCGCTCCACATTGATGGGTTTTTGAGCTTATGCAGTACTGAAAAAGACGCCACATCCAATGATGGGAAGTTAAAAGATTCCAAAACAATCAACCAGAGTTATCATAGACATTTATTTGATAAAGTGGAAGGAATTTTAGCTGCAAAGAATGCATTTGCAGTAGAAAGCATAGGAGTATTGTTTCACTTGCTTATTGATCAAGTTAAAAAGCTAAAGAGGGATTCAGCGCTGACTGCAAGTACCAAAATGATGGGGAAGAGTGAAGATTCAAGGCAGTTAGAAGATAGTTCATTGGGTCAAACGTCTATGATGTCTTCTGAGAGTCGTATTGTTGAAAAGAATTATTGCTCAACTAGTTTCAATCCAGGAACACGAAATTCACTTCACGATTTTTTTGTACTGATTATGGAGCCTCTTTTGCTTGAGATCAATGGCTTTCTTGAAACTAAACTGAAAGTGGGCCCTGAATTGTTGGATATTCATTGCACACTTAAAGCTATAAATAATTTGTATGCCAAAAGGTCATTTGGACACGAGATCATTTTCATGTTATGTGACTTCTATTCTGAACCTCGAAAGATAATAGTACCTCATTATGTATATGTGAACCTTTTCCCCCAGCAGTCTCAAGAATTCATATCTCATGAAAAGATTGTTGTTGGCGGCTTATTAGATTATCAGAATGCTTCATACTCAACTTATTATTATGAGCTCTTCAGATTGTTTGTGTCCTGTCGAAAGGCCTTAAGATGTATAATTACTGCTTGTGAGGAGACAGTAGCCAGTCGAACCTCAGACACTGTACTCTTTGAGGATTTATTTCCAGTTTCATGGCTTTACAAGTCAGTGCATATGGTTGCTGGGCTTCAAGAATCATTCTCAAAAGATATTTATCATCAAGTTCATGATATGATCTTGGCGTTAATGGATCACACATTTTATGTGTTTCTGACATTAAATAAATATCAATCCAATCATGCTGTTCGTTTCCTTGAGGTTGCTGAGCTGAAGTTTGGATGTGCCCAAGAACAGAGAAGTTTATTTAATTCGTCCAATTATATTGAAGCCTGGAAAAGTGTAAACATCGTTGCTAAGATTTTGAAGGAACAGATGCAGATCTTACTTGTAAATGTGAAGAATGGCATTTGTAATGGAAAAGAGGAAGTTTCTGTTGATGCTTTAAATTTGAATAGGTTTTCTTCCATAATTACGTGTTTTAGTGGGTTTTTGTGGGGCCTAGCATGCGTTGTGATCGACACAGATGGGAGAAATAGTGATGAGAAAGCTAAGTTGTCAAGGTGGAAACTTGAACCAATCTCCGAACTCAACCTCTGTATAAAGAAGTCAGGCTACAATTTAGATTTGTTGGGTGCAGAGAGGATTTTGCCGGAAGGCAATGATGCTGACACTGATATGGCATGTGGTGGACTGCAGGATGAATCTGCAGTTGCAGTGACGTGCTCAGCATCATCTGACATCTGTGATGACTCTGTAATTGGTAGTGTTCATAGAAGAAGACCGCGCTTGAAAGATGCAAGTAGTGTTGTTAGTGTTCTCACTGCTGTTGATTCATTTGAACTGCAATCTTTAAATAAGCCTTTGTTGAGAAGCATGCTAAAAGGTGATTTCCCCAACGCAGCATTTTTACTCAGGCAGTTGTTAATCGCCTCTTCTGCTATTTTGAGGCTAAATTTGCATATTAAGAGCGCTCCCATGTTGTCAAGCTTAGTGCATAAGTTTGCTGGCATTATGCAAGTCTTGTTATTGGAATCAGCGGACGCAAGTCAGGTTGAGGTCATCATTCGCAGTGTTCATAAAGAAATCAACAGAGTTGCATCTCCAATCTGCAGTTCAAGCTATCGAAAGGTTTCTTCAGTTGTTGCATCTGGCATTGATTGCTTGGACTTGGTTCTGGAATTTGTTTCAGGACGCAATTTGATTGTGGTTAAAAAATACATTCAGAGGTTAATTGCCCGCATGTTCAATGTTATTCTGCATCTGCAGAGTCCACTAATCTTCTATGAGAGATTCACTCAGAGTAAAGATGATAGTGATCCAGATCCAGGAACAGTCATCCTTATGGAAATAGATGAAGCTCTAAGACCAGGTGTATATGCGCTGATAGATGTTTGCTCACCTGATGATCTTCAACGTCTTCATACCTCATTTGGAGAGGGTCCTTGCAGAAACACCTTGGCAACCTTGAAGCACGATTATGAACTCAATTTCCAGTACCAGGGAAAAGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0009505 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal_Lectin Glyco_hydro_35

Protein Analysis

955

Amino Acids

107.44

Weight (kDa)

6.67

Isoelectric Point (pI)

47.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Urb2	PF10441	898 - 954	4.3e-11	Urb2/Npa2 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36360 AT4G36360
fragaria_vesca	FvH4_1g12350 FvH4_1g12350 FvH4_1g12350 FvH4_1g12350 FvH4_2g09820 FvH4_2g09820
malus_domestica	MD02G1137500.v1.1 MD10G1067800.v1.1 MD15G1251100.v1.1
prunus_persica	Prupe.7G163100_v2.0.a1 Prupe.7G163100_v2.0.a1 Prupe.7G163100_v2.0.a1 Prupe.7G163100_v2.0.a1 Prupe.7G163100_v2.0.a1 Prupe.7G163100_v2.0.a1 Prupe.8G089500_v2.0.a1 Prupe.8G089500_v2.0.a1
pyrus_communis	pycom02g10880 pycom10g05360 pycom15g22140
rosa_chinensis	RchiOBHm_Chr2g0100171 RchiOBHm_Chr6g0266171
rosa_laevigata	RLG00000014106 RLG00000014109 RLG00000016943
rosa_multiflora	Rmu_sc0002547.1_g000001
rosa_roxburghii	Rroxscaffold_174G00435340 Rroxscaffold_2G00142500 Rroxscaffold_7G00201780 Rroxscaffold_7G00201840
rosa_rugosa	Rorug02G0086200 Rorug06G0024500 Rorug06G0024900 Rorug06G0025000
rosa_samantha	Rh2AG135300 Rh2CG140500 Rh2DG140700 Rh6BG145900 Rh6CG142300 Rh6DG130400
rosa_wichuraiana	Rw2G010560 Rw6G012540 Rw6G012580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	69, 622
AccII	CGCG	1 cut(s)	2140
AciI	CCGC	7 cut(s)	69, 106, 620, 1281, 2138, 2393, 2593
AclWI	GGATC	5 cut(s)	361, 374, 1554, 2666, 2672
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	6 cut(s)	750, 994, 1250, 1801, 2308, 2534
AcuI	CTGAAG	5 cut(s)	450, 599, 1318, 1646, 2475
AcyI	GRCGYC	1 cut(s)	666
AfaI	GTAC	6 cut(s)	655, 859, 1017, 1206, 1422, 2852
AfeI	AGCGCT	2 cut(s)	846, 2326
AfiI	CCNNNNNNNGG	4 cut(s)	182, 681, 2681, 2854
AflII	CTTAAG	1 cut(s)	1363
AflIII	ACRYGT	2 cut(s)	333, 1829
AhlI	ACTAGT	1 cut(s)	971
AjiI	CACGTC	1 cut(s)	2076
AjnI	CCWGG	7 cut(s)	201, 556, 982, 1685, 2680, 2722, 2853
AjuI	GAANNNNNNNTTGG	2 cut(s)	2452, 2484
AloI	GAACNNNNNNTCC	2 cut(s)	2829, 2861
Alw21I	GWGCWC	2 cut(s)	1332, 2081
Alw26I	GTCTC	4 cut(s)	25, 530, 1248, 1385
AlwI	GGATC	5 cut(s)	361, 374, 1554, 2666, 2672
AlwNI	CAGNNNCTG	1 cut(s)	1418
Aor51HI	AGCGCT	2 cut(s)	846, 2326
AoxI	GGCC	5 cut(s)	3, 89, 1078, 1359, 1852
ApaI	GGGCCC	1 cut(s)	1082
ApeKI	GCWGC	3 cut(s)	303, 758, 2255
ApoI	RAATTY	6 cut(s)	750, 994, 1250, 1801, 2308, 2534
ArsI	GACNNNNNNTTYG	2 cut(s)	134, 166
Asp700I	GAANNNNTTC	2 cut(s)	1229, 2485
AspLEI	GCGC	4 cut(s)	847, 2142, 2327, 2737
AspS9I	GGNCC	6 cut(s)	71, 188, 1078, 1079, 1852, 2795
AsuHPI	GGTGA	4 cut(s)	298, 608, 2252, 2745
AvaII	GGWCC	3 cut(s)	71, 188, 2795
BaeGI	GKGCMC	2 cut(s)	1082, 1642
BamHI	GGATCC	1 cut(s)	366
BanII	GRGCYC	3 cut(s)	457, 1082, 1332
BarI	GAAGNNNNNNTAC	2 cut(s)	1952, 1984
BauI	CACGAG	1 cut(s)	1151
BbsI	GAAGAC	3 cut(s)	924, 2140, 2765
Bbv12I	GWGCWC	2 cut(s)	1332, 2081
BbvI	GCAGC	3 cut(s)	315, 745, 2267
BccI	CCATC	5 cut(s)	464, 626, 674, 862, 1874
BciT130I	CCWGG	7 cut(s)	203, 558, 984, 1687, 2682, 2724, 2855
BclI	TGATCA	1 cut(s)	814
BcoDI	GTCTC	4 cut(s)	25, 530, 1248, 1385
BcuI	ACTAGT	1 cut(s)	971
BfaI	CTAG	3 cut(s)	260, 972, 1856
BfmI	CTRYAG	4 cut(s)	2048, 2061, 2464, 2618
BfoI	RGCGCY	2 cut(s)	848, 2328
BfrI	CTTAAG	1 cut(s)	1363
BglII	AGATCT	1 cut(s)	1734
BisI	GCNGC	4 cut(s)	304, 759, 1282, 2256
BlpI	GCTNAGC	2 cut(s)	1620, 2080
BlsI	GCNGC	4 cut(s)	305, 760, 1283, 2257
BmcAI	AGTACT	1 cut(s)	655
Bme1390I	CCNGG	7 cut(s)	203, 558, 984, 1687, 2682, 2724, 2855
Bme18I	GGWCC	3 cut(s)	71, 188, 2795
BmgBI	CACGTC	1 cut(s)	2076
BmgT120I	GGNCC	6 cut(s)	71, 188, 1078, 1079, 1852, 2795
BmiI	GGNNCC	7 cut(s)	73, 200, 368, 1029, 1080, 1853, 2796
BmrFI	CCNGG	7 cut(s)	203, 558, 984, 1687, 2682, 2724, 2855
BoxI	GACNNNNGTC	1 cut(s)	2400
BpiI	GAAGAC	3 cut(s)	924, 2140, 2765
BplI	GAGNNNNNCTC	2 cut(s)	2635, 2667
BpmI	CTGGAG	3 cut(s)	33, 224, 521
Bpu1102I	GCTNAGC	2 cut(s)	1620, 2080
BpuEI	CTTGAG	3 cut(s)	1061, 1230, 1631
BsaAI	YACGTR	1 cut(s)	1830
BsaBI	GATNNNNATC	4 cut(s)	1509, 1733, 2670, 2676
BsaHI	GRCGYC	1 cut(s)	666
BsaI	GGTCTC	1 cut(s)	530
BsaJI	CCNNGG	3 cut(s)	191, 2811, 2854
BsaXI	ACNNNNNCTCC	2 cut(s)	1876, 1906
Bsc4I	CCNNNNNNNGG	4 cut(s)	182, 681, 2681, 2854
Bse1I	ACTGG	4 cut(s)	370, 1401, 1442, 2848
Bse3DI	GCAATG	2 cut(s)	1099, 2020
Bse8I	GATNNNNATC	4 cut(s)	1509, 1733, 2670, 2676
BseBI	CCWGG	7 cut(s)	203, 558, 984, 1687, 2682, 2724, 2855
BseDI	CCNNGG	3 cut(s)	191, 2811, 2854
BseGI	GGATG	4 cut(s)	671, 1640, 2059, 2691
BseJI	GATNNNNATC	4 cut(s)	1509, 1733, 2670, 2676
BseLI	CCNNNNNNNGG	4 cut(s)	182, 681, 2681, 2854
BseMI	GCAATG	2 cut(s)	1099, 2020
BseMII	CTCAG	6 cut(s)	927, 1425, 1611, 2094, 2281, 2666
BseNI	ACTGG	4 cut(s)	370, 1401, 1442, 2848
BseRI	GAGGAG	1 cut(s)	1403
BseSI	GKGCMC	2 cut(s)	1082, 1642
BseXI	GCAGC	3 cut(s)	315, 745, 2267
BseYI	CCCAGC	2 cut(s)	1236, 1478
BsgI	GTGCAG	1 cut(s)	2010
Bsh1236I	CGCG	1 cut(s)	2140
BshFI	GGCC	5 cut(s)	5, 91, 1080, 1361, 1854
BsiHKAI	GWGCWC	2 cut(s)	1332, 2081
BsiSI	CCGG	1 cut(s)	2006
BslI	CCNNNNNNNGG	4 cut(s)	182, 681, 2681, 2854
BsmAI	GTCTC	4 cut(s)	25, 530, 1248, 1385
BsmI	GAATGC	2 cut(s)	772, 1306
BsnI	GGCC	5 cut(s)	5, 91, 1080, 1361, 1854
Bso31I	GGTCTC	1 cut(s)	530
Bsp120I	GGGCCC	1 cut(s)	1078
Bsp1286I	GDGCHC	5 cut(s)	457, 1082, 1332, 1642, 2081
Bsp1720I	GCTNAGC	2 cut(s)	1620, 2080
Bsp19I	CCATGG	1 cut(s)	191
BspACI	CCGC	7 cut(s)	69, 106, 620, 1281, 2138, 2393, 2593
BspANI	GGCC	5 cut(s)	5, 91, 1080, 1361, 1854
BspCNI	CTCAG	6 cut(s)	928, 1424, 1612, 2093, 2280, 2665
BspFNI	CGCG	1 cut(s)	2140
BspHI	TCATGA	2 cut(s)	1261, 1522
BspLI	GGNNCC	7 cut(s)	73, 200, 368, 1029, 1080, 1853, 2796
BspMAI	CTGCAG	4 cut(s)	2052, 2065, 2468, 2622
BspPI	GGATC	5 cut(s)	361, 374, 1554, 2666, 2672
BspQI	GCTCTTC	1 cut(s)	1337
BspTI	CTTAAG	1 cut(s)	1363
BspTNI	GGTCTC	1 cut(s)	530
BsrBI	CCGCTC	2 cut(s)	69, 622
BsrDI	GCAATG	2 cut(s)	1099, 2020
BsrI	ACTGG	4 cut(s)	370, 1401, 1442, 2848
BssECI	CCNNGG	3 cut(s)	191, 2811, 2854
BssNI	GRCGYC	1 cut(s)	666
BssSI	CACGAG	1 cut(s)	1151
BssT1I	CCWWGG	2 cut(s)	191, 2811
Bst2BI	CACGAG	1 cut(s)	1151
Bst2UI	CCWGG	7 cut(s)	203, 558, 984, 1687, 2682, 2724, 2855
Bst4CI	ACNGT	3 cut(s)	1396, 1420, 2689
Bst6I	CTCTTC	4 cut(s)	50, 869, 1337, 2293
BstACI	GRCGYC	1 cut(s)	666
BstAFI	CTTAAG	1 cut(s)	1363
BstAPI	GCANNNNNTGC	2 cut(s)	767, 2514
BstBAI	YACGTR	1 cut(s)	1830
BstC8I	GCNNGC	4 cut(s)	1861, 2231, 2362, 2593
BstDSI	CCRYGG	1 cut(s)	191
BstF5I	GGATG	4 cut(s)	671, 1640, 2059, 2691
BstFNI	CGCG	1 cut(s)	2140
BstH2I	RGCGCY	2 cut(s)	848, 2328
BstHHI	GCGC	4 cut(s)	847, 2142, 2327, 2737
BstMAI	GTCTC	4 cut(s)	25, 530, 1248, 1385
BstMWI	GCNNNNNNNGC	8 cut(s)	767, 851, 1036, 1860, 2291, 2311, 2472, 2514
BstNI	CCWGG	7 cut(s)	203, 558, 984, 1687, 2682, 2724, 2855
BstNSI	RCATGY	5 cut(s)	337, 1863, 2040, 2233, 2599
BstPAI	GACNNNNGTC	1 cut(s)	2400
BstSCI	CCNGG	7 cut(s)	201, 556, 982, 1685, 2680, 2722, 2853
BstSFI	CTRYAG	4 cut(s)	2048, 2061, 2464, 2618
BstSLI	GKGCMC	2 cut(s)	1082, 1642
BstUI	CGCG	1 cut(s)	2140
BstV1I	GCAGC	3 cut(s)	315, 745, 2267
BstV2I	GAAGAC	3 cut(s)	924, 2140, 2765
BstX2I	RGATCY	3 cut(s)	366, 1734, 2677
BstXI	CCANNNNNNTGG	4 cut(s)	545, 632, 868, 1449
BstYI	RGATCY	3 cut(s)	366, 1734, 2677
BsuRI	GGCC	5 cut(s)	5, 91, 1080, 1361, 1854
BtgI	CCRYGG	1 cut(s)	191
BtrI	CACGTC	1 cut(s)	2076
BtsCI	GGATG	4 cut(s)	671, 1640, 2059, 2691
BtsI	GCAGTG	5 cut(s)	313, 333, 2076, 2175, 2431
BtsIMutI	CAGTG	9 cut(s)	313, 333, 364, 1416, 1470, 2025, 2076, 2175, 2431
Cac8I	GCNNGC	4 cut(s)	1861, 2231, 2362, 2593
CaiI	CAGNNNCTG	1 cut(s)	1418
CciI	TCATGA	2 cut(s)	1261, 1522
CfoI	GCGC	4 cut(s)	847, 2142, 2327, 2737
Cfr13I	GGNCC	6 cut(s)	71, 188, 1078, 1079, 1852, 2795
CseI	GACGC	3 cut(s)	674, 2405, 2556
CsiI	ACCWGGT	1 cut(s)	2722
Csp6I	GTAC	6 cut(s)	654, 858, 1016, 1205, 1421, 2851
CspCI	CAANNNNNGTGG	2 cut(s)	166, 201
CviQI	GTAC	6 cut(s)	654, 858, 1016, 1205, 1421, 2851
DraI	TTTAAA	2 cut(s)	1800, 2208
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	4 cut(s)	50, 869, 1337, 2293
EarI	CTCTTC	4 cut(s)	50, 869, 1337, 2293
Ecl136II	GAGCTC	1 cut(s)	1330
Eco130I	CCWWGG	2 cut(s)	191, 2811
Eco147I	AGGCCT	1 cut(s)	1361
Eco24I	GRGCYC	3 cut(s)	457, 1082, 1332
Eco31I	GGTCTC	1 cut(s)	530
Eco47I	GGWCC	3 cut(s)	71, 188, 2795
Eco47III	AGCGCT	2 cut(s)	846, 2326
Eco53kI	GAGCTC	1 cut(s)	1330
Eco57I	CTGAAG	5 cut(s)	450, 599, 1318, 1646, 2475
EcoICRI	GAGCTC	1 cut(s)	1330
EcoO109I	RGGNCCY	3 cut(s)	1079, 1852, 2795
EcoRI	GAATTC	1 cut(s)	1250
EcoRII	CCWGG	7 cut(s)	201, 556, 982, 1685, 2680, 2722, 2853
EcoT14I	CCWWGG	2 cut(s)	191, 2811
EcoT22I	ATGCAT	1 cut(s)	772
EcoT38I	GRGCYC	3 cut(s)	457, 1082, 1332
ErhI	CCWWGG	2 cut(s)	191, 2811
FauI	CCCGC	2 cut(s)	627, 2600
FauNDI	CATATG	1 cut(s)	1470
FbaI	TGATCA	1 cut(s)	814
Fnu4HI	GCNGC	4 cut(s)	304, 759, 1282, 2256
FokI	GGATG	4 cut(s)	658, 1647, 2066, 2678
FriOI	GRGCYC	3 cut(s)	457, 1082, 1332
Fsp4HI	GCNGC	4 cut(s)	304, 759, 1282, 2256
FspBI	CTAG	3 cut(s)	260, 972, 1856
GlaI	GCGC	4 cut(s)	846, 2141, 2326, 2736
GluI	GCNGC	4 cut(s)	304, 759, 1282, 2256
GsaI	CCCAGC	2 cut(s)	1240, 1482
GsuI	CTGGAG	3 cut(s)	33, 224, 521
HaeII	RGCGCY	2 cut(s)	848, 2328
HaeIII	GGCC	5 cut(s)	5, 91, 1080, 1361, 1854
HapII	CCGG	1 cut(s)	2006
HgaI	GACGC	3 cut(s)	674, 2405, 2556
HhaI	GCGC	4 cut(s)	847, 2142, 2327, 2737
Hin1I	GRCGYC	1 cut(s)	666
Hin6I	GCGC	4 cut(s)	845, 2140, 2325, 2735
HinP1I	GCGC	4 cut(s)	845, 2140, 2325, 2735
HindIII	AAGCTT	2 cut(s)	581, 2341
HpaII	CCGG	1 cut(s)	2006
HphI	GGTGA	4 cut(s)	298, 608, 2252, 2745
Hpy166II	GTNNAC	5 cut(s)	331, 1225, 1699, 2045, 2627
Hpy8I	GTNNAC	5 cut(s)	331, 1225, 1699, 2045, 2627
HpyAV	CCTTC	7 cut(s)	244, 283, 290, 383, 740, 1714, 2003
HpyCH4III	ACNGT	3 cut(s)	1396, 1420, 2689
HpyCH4IV	ACGT	6 cut(s)	340, 443, 920, 1829, 2075, 2770
HpyF10VI	GCNNNNNNNGC	8 cut(s)	767, 851, 1036, 1860, 2291, 2311, 2472, 2514
HpySE526I	ACGT	6 cut(s)	340, 443, 920, 1829, 2075, 2770
Hsp92I	GRCGYC	1 cut(s)	666
HspAI	GCGC	4 cut(s)	845, 2140, 2325, 2735
Ksp22I	TGATCA	1 cut(s)	814
LguI	GCTCTTC	1 cut(s)	1337
LmnI	GCTCC	5 cut(s)	14, 501, 627, 1027, 2332
Lsp1109I	GCAGC	3 cut(s)	315, 745, 2267
MabI	ACCWGGT	1 cut(s)	2722
MaeI	CTAG	3 cut(s)	260, 972, 1856
MaeII	ACGT	6 cut(s)	340, 443, 920, 1829, 2075, 2770
MaeIII	GTNAC	3 cut(s)	336, 1172, 2071
MbiI	CCGCTC	2 cut(s)	69, 622
MflI	RGATCY	3 cut(s)	366, 1734, 2677
MhlI	GDGCHC	5 cut(s)	457, 1082, 1332, 1642, 2081
MlyI	GAGTC	3 cut(s)	949, 2099, 2632
MmeI	TCCRAC	3 cut(s)	139, 542, 1071
Mph1103I	ATGCAT	1 cut(s)	772
MroXI	GAANNNNTTC	2 cut(s)	1229, 2485
MslI	CAYNNNNRTG	5 cut(s)	630, 1163, 2030, 2696, 2832
MspA1I	CMGCKG	1 cut(s)	2393
MspCI	CTTAAG	1 cut(s)	1363
MspI	CCGG	1 cut(s)	2006
MspR9I	CCNGG	7 cut(s)	203, 558, 984, 1687, 2682, 2724, 2855
Mva1269I	GAATGC	2 cut(s)	772, 1306
MvaI	CCWGG	7 cut(s)	203, 558, 984, 1687, 2682, 2724, 2855
MvnI	CGCG	1 cut(s)	2140
MwoI	GCNNNNNNNGC	8 cut(s)	767, 851, 1036, 1860, 2291, 2311, 2472, 2514
NcoI	CCATGG	1 cut(s)	191
NdeI	CATATG	1 cut(s)	1470
NlaIV	GGNNCC	7 cut(s)	73, 200, 368, 1029, 1080, 1853, 2796
NmuCI	GTSAC	3 cut(s)	336, 1172, 2071
NsiI	ATGCAT	1 cut(s)	772
NspI	RCATGY	5 cut(s)	337, 1863, 2040, 2233, 2599
PaeI	GCATGC	2 cut(s)	1863, 2233
PagI	TCATGA	2 cut(s)	1261, 1522
PceI	AGGCCT	1 cut(s)	1361
PciI	ACATGT	1 cut(s)	333
PciSI	GCTCTTC	1 cut(s)	1337
PctI	GAATGC	2 cut(s)	772, 1306
PdmI	GAANNNNTTC	2 cut(s)	1229, 2485
PfoI	TCCNGGA	2 cut(s)	982, 2680
PkrI	GCNGC	4 cut(s)	305, 760, 1283, 2257
PleI	GAGTC	3 cut(s)	948, 2099, 2631
PpsI	GAGTC	3 cut(s)	948, 2099, 2631
Ppu21I	YACGTR	1 cut(s)	1830
PpuMI	RGGWCCY	1 cut(s)	2795
PscI	ACATGT	1 cut(s)	333
PshAI	GACNNNNGTC	1 cut(s)	2400
Psp124BI	GAGCTC	1 cut(s)	1332
Psp5II	RGGWCCY	1 cut(s)	2795
Psp6I	CCWGG	7 cut(s)	201, 556, 982, 1685, 2680, 2722, 2853
PspFI	CCCAGC	2 cut(s)	1236, 1478
PspGI	CCWGG	7 cut(s)	201, 556, 982, 1685, 2680, 2722, 2853
PspN4I	GGNNCC	7 cut(s)	73, 200, 368, 1029, 1080, 1853, 2796
PspOMI	GGGCCC	1 cut(s)	1078
PspPI	GGNCC	6 cut(s)	71, 188, 1078, 1079, 1852, 2795
PspPPI	RGGWCCY	1 cut(s)	2795
PstI	CTGCAG	4 cut(s)	2052, 2065, 2468, 2622
PstNI	CAGNNNCTG	1 cut(s)	1418
PsuI	RGATCY	3 cut(s)	366, 1734, 2677
RsaI	GTAC	6 cut(s)	655, 859, 1017, 1206, 1422, 2852
RsaNI	GTAC	6 cut(s)	654, 858, 1016, 1205, 1421, 2851
RseI	CAYNNNNRTG	5 cut(s)	630, 1163, 2030, 2696, 2832
SacI	GAGCTC	1 cut(s)	1332
SapI	GCTCTTC	1 cut(s)	1337
SatI	GCNGC	4 cut(s)	304, 759, 1282, 2256
Sau96I	GGNCC	6 cut(s)	71, 188, 1078, 1079, 1852, 2795
ScaI	AGTACT	1 cut(s)	655
SchI	GAGTC	3 cut(s)	949, 2099, 2632
ScrFI	CCNGG	7 cut(s)	203, 558, 984, 1687, 2682, 2724, 2855
SduI	GDGCHC	5 cut(s)	457, 1082, 1332, 1642, 2081
SexAI	ACCWGGT	1 cut(s)	2722
SfcI	CTRYAG	4 cut(s)	2048, 2061, 2464, 2618
SinI	GGWCC	3 cut(s)	71, 188, 2795
SmiMI	CAYNNNNRTG	5 cut(s)	630, 1163, 2030, 2696, 2832
SmlI	CTYRAG	4 cut(s)	1040, 1245, 1363, 1610
SmoI	CTYRAG	4 cut(s)	1040, 1245, 1363, 1610
SpeI	ACTAGT	1 cut(s)	971
SphI	GCATGC	2 cut(s)	1863, 2233
SseBI	AGGCCT	1 cut(s)	1361
SsiI	CCGC	7 cut(s)	69, 106, 620, 1281, 2138, 2393, 2593
SspMI	CTAG	3 cut(s)	260, 972, 1856
SstI	GAGCTC	1 cut(s)	1332
StuI	AGGCCT	1 cut(s)	1361
StyD4I	CCNGG	7 cut(s)	201, 556, 982, 1685, 2680, 2722, 2853
StyI	CCWWGG	2 cut(s)	191, 2811
TaaI	ACNGT	3 cut(s)	1396, 1420, 2689
TaiI	ACGT	6 cut(s)	343, 446, 923, 1832, 2078, 2773
TaqI	TCGA	6 cut(s)	281, 1192, 1354, 1405, 1872, 2479
TatI	WGTACW	3 cut(s)	653, 1015, 1420
TauI	GCSGC	1 cut(s)	1284
TscAI	CASTG	9 cut(s)	313, 333, 364, 1423, 1470, 2032, 2076, 2182, 2431
TseFI	GTSAC	3 cut(s)	336, 1172, 2071
TseI	GCWGC	3 cut(s)	303, 758, 2255
Tsp45I	GTSAC	3 cut(s)	336, 1172, 2071
TspRI	CASTG	9 cut(s)	313, 333, 364, 1423, 1470, 2032, 2076, 2182, 2431
Vha464I	CTTAAG	1 cut(s)	1363
VpaK11BI	GGWCC	3 cut(s)	71, 188, 2795
XapI	RAATTY	6 cut(s)	750, 994, 1250, 1801, 2308, 2534
XceI	RCATGY	5 cut(s)	337, 1863, 2040, 2233, 2599
XmnI	GAANNNNTTC	2 cut(s)	1229, 2485
XspI	CTAG	3 cut(s)	260, 972, 1856
ZrmI	AGTACT	1 cut(s)	655
Zsp2I	ATGCAT	1 cut(s)	772

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.