Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0002237

Physical Location & Seq

Genomic Coordinates Forward (+)

16765901 .. 16769535

Gene Structure 3635 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGGTACTGATGCTGCTGAAGTGGCGGAGGCAACGAGGAAACCTCATTCCTTTAAGGTTCACCGTTTAATGTGCACGGAACTCCTGAGGTTGGTTGATAGAATATCCAGGATACTTCCAGAAATAGAAGCAGCTCGACCTCGGTGCTCAACAGGAATACAGGCTTTATGCTTGTTAAATCGTGGAATGGAGAAAGCCAAGCTACTTCTTCAGCATTGCAGCGAGTCTAGTAAACTCTACCTGGCAGTTACTGGGGATGTGATGGTCTCAAGATGTCAAAGATCAAGGAACTTGTTAGAGCAAAGTTTACGAGAAATTCAGAACTGGGTTCCAGTGATGTTGGTGATGCAGCTGTCTCAAATAGCTGAGGATCTTAAAGGTTCAACATTTATACTGGACCCGTATGAAGAAGAAGCTGGGAGGGTTGTCCGAGAATTGCTCCATGATGTCTCTTCTCAGTCAGACCCAAGGGAGGATTCTGAAATCAAGGCTCTTCAAATTGCGTCCTTGAGGCTCCATATCACATCATCAAAGGCAATCTTAATTGAGAAAAGATCGATTAGGAAGTTGCTAGAAAAAGTTGGTGACAGTGACCCTCAGAAAAAGCAAATTTTGATTTATTTCATGCATCTATTGAAGAAGTATGGAAGCTTGATAACGGGAAAGCAAACAGATAGTGCCTTAGAGCTGCAACAAGGAACGTTTGCTTCTGAGAATTCTGGAAATGGTTTTGAATCTAATCAACATGCTGAAGTTGAACCTCACATTGGTTATGGCGAGTCCAAGGCACAAAGTAACTTGTTTCGTGGAGCTGTACCTCCTGAGGAATTTATGTGCGGAATATCTTCCAGAATAATGTACGATCCTGTTGTCATTGATTCTGGTCAAACATATGAAAAAATGTGGATACAGAAGTGGTTTGATGAGGGTCACGATACATGCCCAAAAACTAATATGAAACTAACCAACCTGTCATTGACTCCGAACATTAACATGAAGGAGTTAATATCAAGGTGGTGTACACAGTATGGAGTTGTCCTTCCCGACCCAAGTATGCAACCAGAAGTCCTCTCATGGGAAACCTCTTCCACTTCCGTTCGTAGTTTAGGCAATTCTATGAATGATCTACACCTACAAATGGATTTCAGCAGTATATCGTTTGGGTCCTTAGATACCAGTTACAATTCGGATTCATCACGCAATAAGATTGAAAATGGCTTGAGTTTGGTGCAGAACGACAATGATTCTCTGAAACACCAGTATGCTAAAAAATGCGAGACAGGTGCTCAATTTCTATCTGAACTTGGTGAAGTCCAATGGGAATCCCAATGCAAGGTTGTCGAAGATGTCAAAAACCATTTGAAATGCAATCCTCAAGCTTCCTTTGCTATGTCATCTAAGAATTTTGTTGAACCTCTCATCAAATTTTTGAGGGATGCACATGACCTGGATGATGCAAAAGCGCAGAGGGATGGATTTAAATTATTACTGACCTTTGTGAGAAAAAACAGAAACGGAATACCTTATCTATGTGAAGAGGCGTATAGTCTGCTGGCATGTTATCTTGATTCAAAGGTAACAGAAGAAGTTCTTGCCATAATGGAAGTTGTGTCTGGCCACCAGTATTGCAGGCCTAAGGTCTCAGAATCTGGTGCACTTACATCCATTCTAAAACTTCTCGACTCCCAGAGCAAAGATTTACAAGGACAAGCCATTAAGATTTTACGTAATTTGTCCTTAGATAAGGACATTTGCTCAAAAATTGTATCTTCGGAGTGCATACCAAAATTGGTTTCTTTCTTTAAAGATGACGTTCTTTCAGGAGTCTGCATTTCTATATTGAAAAATTTGTGTGATACTGAAGAGGCCAGGATTTCAATTGCTGCAAGTAATGGATGCATTGCTTCTATTGCTGAACTCCTGGAGAGAGGCAGCAGTGAGGACAAAGAACATGCTGTTGATATCCTCCTTTCTTTATGCTCTCAACGTGATGAGTACTGTCAGTTGGTCATGCACGAGGGTGTTATCCCATCACTTGTCTATTTATCTAACAATGGGACAGAGAGAGCAATGACAAGCGCATTGGAAGTGCTACGGCTCTTAAGAGATATCAAATATGTCGATGAGCACGAGTGCTCTGGATCTGCTGACCTTAATGCATCCGGAGACCATGTAAATCGTTCTACTGAAAGGAAATCACCAAAGACTTCAGGATTCTTTGGAAAGAAAATGTCCATGTTCTCAAAACCCAGTTCCCTTATACCGAAAAAGAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KAP U-box

Protein Analysis

760

Amino Acids

84.93

Weight (kDa)

6.12

Isoelectric Point (pI)

44.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	274 - 342	1.2e-17	U-box domain
ARM_ARMC5	PF24768	529 - 701	1.2e-10	ARMC5
ARM_PUB	PF25598	535 - 702	2.9e-10	Plant U-box protein ARM repeat region
KAP	PF05804	549 - 650	1.9e-07	Kinesin-associated protein (KAP)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36550
fragaria_vesca	FvH4_1g13090 FvH4_1g13090
malus_domestica	MD02G1145600.v1.1 MD15G1259700.v1.1
prunus_persica	Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1 Prupe.7G156200_v2.0.a1
pyrus_communis	pycom02g11520 pycom15g22690
rosa_chinensis	RchiOBHm_Chr2g0101271 RchiOBHm_Chr2g0104721 RchiOBHm_Chr2g0104731
rosa_laevigata	RLG00000017066 RLG00000017354
rosa_multiflora	Rmu_sc0006314.1_g000019
rosa_roxburghii	Rroxscaffold_2G00141450
rosa_rugosa	Rorug02G0099600 Rorug02G0122000 Rorug02G0122100 Rorug02G0122200
rosa_samantha	Rh2AG145600 Rh2AG172300 Rh2BG151000 Rh2BG179900 Rh2CG151400 Rh2CG177400 Rh2DG151100 Rh2DG178600
rosa_wichuraiana	Rw0G008640 Rw0G008650 Rw2G011360 Rw2G013490 Rw2G013550 Rw2G013560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccIII	TCCGGA	1 cut(s)	2162
AciI	CCGC	2 cut(s)	26, 837
AclI	AACGTT	1 cut(s)	701
AclWI	GGATC	3 cut(s)	378, 857, 2149
AcoI	YGGCCR	1 cut(s)	1615
AcsI	RAATTY	7 cut(s)	315, 609, 715, 827, 1402, 1424, 1846
AcuI	CTGAAG	5 cut(s)	39, 194, 771, 1881, 2193
AfaI	GTAC	5 cut(s)	7, 816, 860, 1021, 1997
AfiI	CCNNNNNNNGG	6 cut(s)	91, 472, 767, 1075, 1138, 1333
AflII	CTTAAG	1 cut(s)	2101
AjnI	CCWGG	5 cut(s)	107, 240, 1446, 1868, 1920
AjuI	GAANNNNNNNTTGG	6 cut(s)	460, 492, 750, 782, 1777, 1809
AleI	CACNNNNGTG	1 cut(s)	2019
AluBI	AGCT	9 cut(s)	134, 202, 352, 365, 416, 651, 688, 812, 1379
AluI	AGCT	9 cut(s)	134, 202, 352, 365, 416, 651, 688, 812, 1379
Alw21I	GWGCWC	6 cut(s)	77, 149, 1288, 1657, 2130, 2138
Alw26I	GTCTC	6 cut(s)	271, 360, 454, 1271, 1645, 2160
Alw44I	GTGCAC	2 cut(s)	73, 1653
AlwI	GGATC	3 cut(s)	378, 857, 2149
AlwNI	CAGNNNCTG	2 cut(s)	251, 1649
Aor13HI	TCCGGA	1 cut(s)	2162
AoxI	GGCC	3 cut(s)	1615, 1631, 1866
ApaLI	GTGCAC	2 cut(s)	73, 1653
ApeKI	GCWGC	7 cut(s)	14, 131, 219, 349, 688, 1883, 1932
ApoI	RAATTY	7 cut(s)	315, 609, 715, 827, 1402, 1424, 1846
Asp700I	GAANNNNTTC	2 cut(s)	844, 1587
AspLEI	GCGC	2 cut(s)	1465, 2081
AspS9I	GGNCC	2 cut(s)	397, 1164
AsuHPI	GGTGA	5 cut(s)	53, 355, 596, 1319, 2190
AvaII	GGWCC	2 cut(s)	397, 1164
AxyI	CCTNAGG	3 cut(s)	86, 822, 1635
BaeGI	GKGCMC	2 cut(s)	77, 1657
BaeI	ACNNNNGTAYC	2 cut(s)	899, 932
BalI	TGGCCA	1 cut(s)	1617
BauI	CACGAG	2 cut(s)	2015, 2129
Bbv12I	GWGCWC	6 cut(s)	77, 149, 1288, 1657, 2130, 2138
BbvCI	CCTCAGC	1 cut(s)	366
BbvI	GCAGC	6 cut(s)	143, 231, 361, 675, 1870, 1944
BccI	CCATC	3 cut(s)	256, 1466, 2038
BceAI	ACGGC	1 cut(s)	2111
BcgI	CGANNNNNNTGC	6 cut(s)	126, 160, 1265, 1299, 1321, 1355
BciT130I	CCWGG	5 cut(s)	109, 242, 1448, 1870, 1922
BciVI	GTATCC	2 cut(s)	105, 900
BcoDI	GTCTC	6 cut(s)	271, 360, 454, 1271, 1645, 2160
BfaI	CTAG	2 cut(s)	228, 572
BfrI	CTTAAG	1 cut(s)	2101
BfuI	GTATCC	2 cut(s)	105, 900
BisI	GCNGC	7 cut(s)	15, 132, 220, 350, 689, 1884, 1933
BlsI	GCNGC	7 cut(s)	16, 133, 221, 351, 690, 1885, 1934
BmcAI	AGTACT	1 cut(s)	1997
Bme1390I	CCNGG	5 cut(s)	109, 242, 1448, 1870, 1922
Bme18I	GGWCC	2 cut(s)	397, 1164
BmgT120I	GGNCC	2 cut(s)	397, 1164
BmiI	GGNNCC	4 cut(s)	330, 399, 515, 1165
BmrFI	CCNGG	5 cut(s)	109, 242, 1448, 1870, 1922
BmrI	ACTGGG	3 cut(s)	261, 334, 2244
BmsI	GCATC	6 cut(s)	336, 637, 1426, 1444, 1886, 2168
BmuI	ACTGGG	3 cut(s)	261, 334, 2244
BplI	GAGNNNNNCTC	4 cut(s)	28, 60, 423, 455
BpmI	CTGGAG	1 cut(s)	1943
Bpu10I	CCTNAGC	1 cut(s)	366
BpuEI	CTTGAG	4 cut(s)	253, 529, 1240, 1359
Bsa29I	ATCGAT	1 cut(s)	557
BsaAI	YACGTR	1 cut(s)	1727
BsaI	GGTCTC	3 cut(s)	271, 1645, 2160
BsaJI	CCNNGG	3 cut(s)	140, 467, 783
BsaWI	WCCGGW	1 cut(s)	2162
BsaXI	ACNNNNNCTCC	2 cut(s)	2157, 2187
Bsc4I	CCNNNNNNNGG	6 cut(s)	91, 472, 767, 1075, 1138, 1333
Bse1I	ACTGG	8 cut(s)	256, 329, 332, 399, 1176, 1258, 1621, 2250
Bse21I	CCTNAGG	3 cut(s)	86, 822, 1635
Bse3DI	GCAATG	3 cut(s)	214, 1899, 2076
BseAI	TCCGGA	1 cut(s)	2162
BseBI	CCWGG	5 cut(s)	109, 242, 1448, 1870, 1922
BseCI	ATCGAT	1 cut(s)	557
BseDI	CCNNGG	3 cut(s)	140, 467, 783
BseGI	GGATG	7 cut(s)	262, 1441, 1456, 1477, 1661, 1901, 2159
BseLI	CCNNNNNNNGG	6 cut(s)	91, 472, 767, 1075, 1138, 1333
BseMI	GCAATG	3 cut(s)	214, 1899, 2076
BseMII	CTCAG	7 cut(s)	77, 357, 470, 611, 702, 813, 1656
BseNI	ACTGG	8 cut(s)	256, 329, 332, 399, 1176, 1258, 1621, 2250
BseSI	GKGCMC	2 cut(s)	77, 1657
BseXI	GCAGC	6 cut(s)	143, 231, 361, 675, 1870, 1944
BseYI	CCCAGC	1 cut(s)	416
BsgI	GTGCAG	1 cut(s)	1250
BshFI	GGCC	3 cut(s)	1617, 1633, 1868
BshVI	ATCGAT	1 cut(s)	557
BsiHKAI	GWGCWC	6 cut(s)	77, 149, 1288, 1657, 2130, 2138
BsiSI	CCGG	1 cut(s)	2163
BslFI	GGGAC	1 cut(s)	2071
BslI	CCNNNNNNNGG	6 cut(s)	91, 472, 767, 1075, 1138, 1333
BsmAI	GTCTC	6 cut(s)	271, 360, 454, 1271, 1645, 2160
BsmFI	GGGAC	1 cut(s)	2071
BsnI	GGCC	3 cut(s)	1617, 1633, 1868
Bso31I	GGTCTC	3 cut(s)	271, 1645, 2160
Bsp1286I	GDGCHC	6 cut(s)	77, 149, 1288, 1657, 2130, 2138
Bsp13I	TCCGGA	1 cut(s)	2162
Bsp1407I	TGTACA	1 cut(s)	1019
Bsp143I	GATC	6 cut(s)	281, 370, 554, 862, 1123, 2141
BspACI	CCGC	2 cut(s)	26, 837
BspANI	GGCC	3 cut(s)	1617, 1633, 1868
BspCNI	CTCAG	7 cut(s)	78, 358, 469, 610, 703, 814, 1655
BspDI	ATCGAT	1 cut(s)	557
BspEI	TCCGGA	1 cut(s)	2162
BspLI	GGNNCC	4 cut(s)	330, 399, 515, 1165
BspPI	GGATC	3 cut(s)	378, 857, 2149
BspQI	GCTCTTC	1 cut(s)	498
BspTI	CTTAAG	1 cut(s)	2101
BspTNI	GGTCTC	3 cut(s)	271, 1645, 2160
BsrDI	GCAATG	3 cut(s)	214, 1899, 2076
BsrGI	TGTACA	1 cut(s)	1019
BsrI	ACTGG	8 cut(s)	256, 329, 332, 399, 1176, 1258, 1621, 2250
BssECI	CCNNGG	3 cut(s)	140, 467, 783
BssMI	GATC	6 cut(s)	281, 370, 554, 862, 1123, 2141
BssSI	CACGAG	2 cut(s)	2015, 2129
BssT1I	CCWWGG	2 cut(s)	467, 783
Bst2BI	CACGAG	2 cut(s)	2015, 2129
Bst2UI	CCWGG	5 cut(s)	109, 242, 1448, 1870, 1922
Bst4CI	ACNGT	4 cut(s)	65, 590, 1026, 2000
Bst6I	CTCTTC	5 cut(s)	457, 498, 1090, 1530, 1857
BstAFI	CTTAAG	1 cut(s)	2101
BstAUI	TGTACA	1 cut(s)	1019
BstBAI	YACGTR	1 cut(s)	1727
BstC8I	GCNNGC	2 cut(s)	1554, 1631
BstF5I	GGATG	7 cut(s)	262, 1441, 1456, 1477, 1661, 1901, 2159
BstHHI	GCGC	2 cut(s)	1465, 2081
BstKTI	GATC	6 cut(s)	284, 373, 557, 865, 1126, 2144
BstMAI	GTCTC	6 cut(s)	271, 360, 454, 1271, 1645, 2160
BstMBI	GATC	6 cut(s)	281, 370, 554, 862, 1123, 2141
BstMWI	GCNNNNNNNGC	3 cut(s)	23, 1385, 1910
BstNI	CCWGG	5 cut(s)	109, 242, 1448, 1870, 1922
BstNSI	RCATGY	4 cut(s)	749, 942, 1560, 1955
BstSCI	CCNGG	5 cut(s)	107, 240, 1446, 1868, 1920
BstSLI	GKGCMC	2 cut(s)	77, 1657
BstSNI	TACGTA	1 cut(s)	1727
BstV1I	GCAGC	6 cut(s)	143, 231, 361, 675, 1870, 1944
BstX2I	RGATCY	2 cut(s)	370, 2141
BstYI	RGATCY	2 cut(s)	370, 2141
Bsu15I	ATCGAT	1 cut(s)	557
Bsu36I	CCTNAGG	3 cut(s)	86, 822, 1635
BsuI	GTATCC	2 cut(s)	105, 900
BsuRI	GGCC	3 cut(s)	1617, 1633, 1868
BsuTUI	ATCGAT	1 cut(s)	557
BtsCI	GGATG	7 cut(s)	262, 1441, 1456, 1477, 1661, 1901, 2159
BtsI	GCAGTG	1 cut(s)	1942
BtsIMutI	CAGTG	3 cut(s)	339, 595, 1942
Cac8I	GCNNGC	2 cut(s)	1554, 1631
CaiI	CAGNNNCTG	2 cut(s)	251, 1649
CfoI	GCGC	2 cut(s)	1465, 2081
Cfr13I	GGNCC	2 cut(s)	397, 1164
ClaI	ATCGAT	1 cut(s)	557
CseI	GACGC	1 cut(s)	492
Csp6I	GTAC	5 cut(s)	6, 815, 859, 1020, 1996
CspCI	CAANNNNNGTGG	2 cut(s)	1607, 1642
CviQI	GTAC	5 cut(s)	6, 815, 859, 1020, 1996
DpnI	GATC	6 cut(s)	283, 372, 556, 864, 1125, 2143
DpnII	GATC	6 cut(s)	281, 370, 554, 862, 1123, 2141
DraI	TTTAAA	2 cut(s)	1480, 1804
EaeI	YGGCCR	1 cut(s)	1615
Eam1104I	CTCTTC	5 cut(s)	457, 498, 1090, 1530, 1857
EarI	CTCTTC	5 cut(s)	457, 498, 1090, 1530, 1857
EciI	GGCGGA	1 cut(s)	41
Eco105I	TACGTA	1 cut(s)	1727
Eco130I	CCWWGG	2 cut(s)	467, 783
Eco147I	AGGCCT	1 cut(s)	1633
Eco31I	GGTCTC	3 cut(s)	271, 1645, 2160
Eco32I	GATATC	2 cut(s)	1963, 2110
Eco47I	GGWCC	2 cut(s)	397, 1164
Eco57I	CTGAAG	5 cut(s)	39, 194, 771, 1881, 2193
Eco81I	CCTNAGG	3 cut(s)	86, 822, 1635
EcoO109I	RGGNCCY	1 cut(s)	1164
EcoRI	GAATTC	1 cut(s)	715
EcoRII	CCWGG	5 cut(s)	107, 240, 1446, 1868, 1920
EcoRV	GATATC	2 cut(s)	1963, 2110
EcoT14I	CCWWGG	2 cut(s)	467, 783
EcoT22I	ATGCAT	3 cut(s)	630, 1901, 2161
ErhI	CCWWGG	2 cut(s)	467, 783
FalI	AAGNNNNNCTT	4 cut(s)	524, 556, 1575, 1607
FaqI	GGGAC	1 cut(s)	2071
FauNDI	CATATG	1 cut(s)	892
Fnu4HI	GCNGC	7 cut(s)	15, 132, 220, 350, 689, 1884, 1933
FokI	GGATG	7 cut(s)	269, 1448, 1463, 1484, 1648, 1908, 2146
Fsp4HI	GCNGC	7 cut(s)	15, 132, 220, 350, 689, 1884, 1933
FspBI	CTAG	2 cut(s)	228, 572
GlaI	GCGC	2 cut(s)	1464, 2080
GluI	GCNGC	7 cut(s)	15, 132, 220, 350, 689, 1884, 1933
GsaI	CCCAGC	1 cut(s)	420
GsuI	CTGGAG	1 cut(s)	1943
HaeIII	GGCC	3 cut(s)	1617, 1633, 1868
HapII	CCGG	1 cut(s)	2163
HgaI	GACGC	1 cut(s)	492
HhaI	GCGC	2 cut(s)	1465, 2081
Hin6I	GCGC	2 cut(s)	1463, 2079
HinP1I	GCGC	2 cut(s)	1463, 2079
HindIII	AAGCTT	2 cut(s)	649, 1377
HpaII	CCGG	1 cut(s)	2163
HphI	GGTGA	5 cut(s)	53, 355, 596, 1319, 2190
Hpy166II	GTNNAC	7 cut(s)	61, 75, 233, 308, 1020, 1022, 1655
Hpy8I	GTNNAC	7 cut(s)	61, 75, 233, 308, 1020, 1022, 1655
HpyAV	CCTTC	2 cut(s)	991, 1049
HpyCH4III	ACNGT	4 cut(s)	65, 590, 1026, 2000
HpyCH4IV	ACGT	4 cut(s)	701, 1726, 1812, 1987
HpyF10VI	GCNNNNNNNGC	3 cut(s)	23, 1385, 1910
HpySE526I	ACGT	4 cut(s)	701, 1726, 1812, 1987
HspAI	GCGC	2 cut(s)	1463, 2079
Kpn2I	TCCGGA	1 cut(s)	2162
Kzo9I	GATC	6 cut(s)	281, 370, 554, 862, 1123, 2141
LguI	GCTCTTC	1 cut(s)	498
LmnI	GCTCC	3 cut(s)	444, 519, 809
Lsp1109I	GCAGC	6 cut(s)	143, 231, 361, 675, 1870, 1944
LweI	GCATC	6 cut(s)	336, 637, 1426, 1444, 1886, 2168
MaeI	CTAG	2 cut(s)	228, 572
MaeII	ACGT	4 cut(s)	701, 1726, 1812, 1987
MaeIII	GTNAC	7 cut(s)	247, 584, 590, 794, 929, 1178, 1576
MalI	GATC	6 cut(s)	283, 372, 556, 864, 1125, 2143
MboI	GATC	6 cut(s)	281, 370, 554, 862, 1123, 2141
MfeI	CAATTG	1 cut(s)	1878
MflI	RGATCY	2 cut(s)	370, 2141
MhlI	GDGCHC	6 cut(s)	77, 149, 1288, 1657, 2130, 2138
MlsI	TGGCCA	1 cut(s)	1617
MluNI	TGGCCA	1 cut(s)	1617
MlyI	GAGTC	5 cut(s)	233, 788, 973, 1676, 1833
Mox20I	TGGCCA	1 cut(s)	1617
Mph1103I	ATGCAT	3 cut(s)	630, 1901, 2161
MroI	TCCGGA	1 cut(s)	2162
MroXI	GAANNNNTTC	2 cut(s)	844, 1587
MscI	TGGCCA	1 cut(s)	1617
MslI	CAYNNNNRTG	3 cut(s)	992, 1260, 2019
Msp20I	TGGCCA	1 cut(s)	1617
MspA1I	CMGCKG	1 cut(s)	352
MspCI	CTTAAG	1 cut(s)	2101
MspI	CCGG	1 cut(s)	2163
MspR9I	CCNGG	5 cut(s)	109, 242, 1448, 1870, 1922
MunI	CAATTG	1 cut(s)	1878
MvaI	CCWGG	5 cut(s)	109, 242, 1448, 1870, 1922
MwoI	GCNNNNNNNGC	3 cut(s)	23, 1385, 1910
NdeI	CATATG	1 cut(s)	892
NdeII	GATC	6 cut(s)	281, 370, 554, 862, 1123, 2141
NlaIV	GGNNCC	4 cut(s)	330, 399, 515, 1165
NmuCI	GTSAC	3 cut(s)	584, 590, 929
NsiI	ATGCAT	3 cut(s)	630, 1901, 2161
NspI	RCATGY	4 cut(s)	749, 942, 1560, 1955
OliI	CACNNNNGTG	1 cut(s)	2019
PceI	AGGCCT	1 cut(s)	1633
PciSI	GCTCTTC	1 cut(s)	498
PcsI	WCGNNNNNNNCGW	1 cut(s)	2127
PdmI	GAANNNNTTC	2 cut(s)	844, 1587
PfeI	GAWTC	9 cut(s)	476, 734, 878, 1190, 1244, 1322, 1568, 1646, 2214
PfoI	TCCNGGA	2 cut(s)	107, 1920
PkrI	GCNGC	7 cut(s)	16, 133, 221, 351, 690, 1885, 1934
PleI	GAGTC	5 cut(s)	232, 787, 973, 1676, 1832
PpsI	GAGTC	5 cut(s)	232, 787, 973, 1676, 1832
Ppu21I	YACGTR	1 cut(s)	1727
PpuMI	RGGWCCY	1 cut(s)	1164
Psp1406I	AACGTT	1 cut(s)	701
Psp5II	RGGWCCY	1 cut(s)	1164
Psp6I	CCWGG	5 cut(s)	107, 240, 1446, 1868, 1920
PspFI	CCCAGC	1 cut(s)	416
PspGI	CCWGG	5 cut(s)	107, 240, 1446, 1868, 1920
PspN4I	GGNNCC	4 cut(s)	330, 399, 515, 1165
PspPI	GGNCC	2 cut(s)	397, 1164
PspPPI	RGGWCCY	1 cut(s)	1164
PstNI	CAGNNNCTG	2 cut(s)	251, 1649
PsuI	RGATCY	2 cut(s)	370, 2141
PvuII	CAGCTG	1 cut(s)	352
RsaI	GTAC	5 cut(s)	7, 816, 860, 1021, 1997
RsaNI	GTAC	5 cut(s)	6, 815, 859, 1020, 1996
RseI	CAYNNNNRTG	3 cut(s)	992, 1260, 2019
SapI	GCTCTTC	1 cut(s)	498
SatI	GCNGC	7 cut(s)	15, 132, 220, 350, 689, 1884, 1933
Sau3AI	GATC	6 cut(s)	281, 370, 554, 862, 1123, 2141
Sau96I	GGNCC	2 cut(s)	397, 1164
ScaI	AGTACT	1 cut(s)	1997
SchI	GAGTC	5 cut(s)	233, 788, 973, 1676, 1833
ScrFI	CCNGG	5 cut(s)	109, 242, 1448, 1870, 1922
SduI	GDGCHC	6 cut(s)	77, 149, 1288, 1657, 2130, 2138
SfaNI	GCATC	6 cut(s)	336, 637, 1426, 1444, 1886, 2168
SinI	GGWCC	2 cut(s)	397, 1164
SmiI	ATTTAAAT	1 cut(s)	1480
SmiMI	CAYNNNNRTG	3 cut(s)	992, 1260, 2019
SmlI	CTYRAG	5 cut(s)	268, 508, 1219, 1374, 2101
SmoI	CTYRAG	5 cut(s)	268, 508, 1219, 1374, 2101
SnaBI	TACGTA	1 cut(s)	1727
SseBI	AGGCCT	1 cut(s)	1633
SsiI	CCGC	2 cut(s)	26, 837
SspMI	CTAG	2 cut(s)	228, 572
StuI	AGGCCT	1 cut(s)	1633
StyD4I	CCNGG	5 cut(s)	107, 240, 1446, 1868, 1920
StyI	CCWWGG	2 cut(s)	467, 783
SwaI	ATTTAAAT	1 cut(s)	1480
TaaI	ACNGT	4 cut(s)	65, 590, 1026, 2000
TaiI	ACGT	4 cut(s)	704, 1729, 1815, 1990
TaqI	TCGA	5 cut(s)	136, 557, 1341, 1680, 2121
TatI	WGTACW	2 cut(s)	1019, 1995
TfiI	GAWTC	9 cut(s)	476, 734, 878, 1190, 1244, 1322, 1568, 1646, 2214
TscAI	CASTG	3 cut(s)	339, 595, 1942
TseFI	GTSAC	3 cut(s)	584, 590, 929
TseI	GCWGC	7 cut(s)	14, 131, 219, 349, 688, 1883, 1932
Tsp45I	GTSAC	3 cut(s)	584, 590, 929
TspDTI	ATGAA	7 cut(s)	420, 613, 909, 971, 1010, 1133, 1182
TspGWI	ACGGA	3 cut(s)	92, 1084, 1530
TspRI	CASTG	3 cut(s)	339, 595, 1942
Vha464I	CTTAAG	1 cut(s)	2101
VneI	GTGCAC	2 cut(s)	73, 1653
VpaK11BI	GGWCC	2 cut(s)	397, 1164
XapI	RAATTY	7 cut(s)	315, 609, 715, 827, 1402, 1424, 1846
XceI	RCATGY	4 cut(s)	749, 942, 1560, 1955
XmnI	GAANNNNTTC	2 cut(s)	844, 1587
XspI	CTAG	2 cut(s)	228, 572
ZrmI	AGTACT	1 cut(s)	1997
Zsp2I	ATGCAT	3 cut(s)	630, 1901, 2161

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.