Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0007588

Physical Location & Seq

Genomic Coordinates Forward (+)

27801709 .. 27815050

Gene Structure 13342 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5160 bp

ATGCAACTTGAAGAGGTTAAGGCTGCAGTGGGTGCACTGTGGAACACTCGTGGTTTGAACTGGCCTAGTGCATTCGAGAACAGGCAGAAAGCTGGCGATCTCGACCTTCTTGATTGGCTGAGGGCCATGTTTGGATTCCAGAAAGACAACGTGAGGAACCAGAGGGAGCATTTGATATTACTACTTGCAAATACTCATATAAGGCTTCATCCCAAACCCGAACCTCTTAATAAGCTGGATGATCGAGCTGTTGATGCAGTTATGGGAAAACTTTTTAAGAACTACAAAACGTGGTGCAAATATTTGGGAAGAAAACATAGTTTGAGACTTCCCCAAGGTCAGCAAGAAATACAGCAAAGGAAGATACTATACATGGGTTTATATCTTCTCATCTGGGGTGAAGCAGCGAATATCCGCTTTATGCCAGAATGTTTGTGCTATATTTTTCATAATATGGCATATGAACTCCATGGTCTGTTGGCTGGAAATGTCAGCATTGTTACTGGGGAAAATATAAAGCCTTCTTATGGTGGGGATGATGAGGCTTTTTTACGGAAAGTTATAACCCCCTTATATCGTGTAATCGAAAAGGAAGCCAAGAAGGGTGAAAATGGAAAAGCTCCTCACATATCTTGGTGCAACTATGACGATCTGAATGAATATTTCTGGTCGTCTGATTGCTTCTCTCTTGGTTGGCCCATGCGTGATGATGGTGATTTTTTCAAATCAACGCGTGACTTGGTGCAGGGGAGAAAGGGCTCTAGAAGAAAATCTGGAAGCACAGGAAAATCTTATTTTATTGAAACTCGGACATTTTGGCACATTTTTAGAAGTTTTGACCGGTTTTGGACCTTTTACATACTTGCTCTACAGGCTCTGCTCATTATTGCTTTTAGAGGGATTTCACCATTGGATATTTTTCAAAAGGATGTCCTAAGAGATCTATCAAGTATTTTCATCACAGCGGCATTTCTTCGCGTCCTTCAAAGCATTTTGGATATTGTTTTAAACTTCCCGGGATATCATAGGTGGAGGTTCACTGATGTACTGCGAAATATTCTCAAGATAATTGTTAGTCTTGTATGGGCAATCATTCTTCCACTGTTTTATGTGCATTCCTTCAATAATGCCCCTAAACAAATCATGGATGTACTATCATTCCTTAAGAATGTGAATGGTGTTCCTCCTTTATACATCATGGCTGTTGCAGTATATTTGCTGCCAAATTTACTAGCGGCATTTTTGTTCCTTTTCCCGCTGTTCCGACGATGGATTGAAAACTCAGACTGGCATATCATTAGGTTTCTCCTGTGGTGGTCACAGCCAAGAATCTATGTCGGGAGGGGAATGCATGAAAGTCAATTTGCCCTTATTAAGTATACTATTTTTTGGGTGCTGCTTTTGGCTTGCAAGTTTACAGTTAGCTATCTTATCCAGATAAAACCTTTGGTGAAGCCAACTAGAGACATTATGAACATTCGTCGTGTAGATTATCAATGGCATGAATTTTTCCCTAATGCTCAAAACAACTATGGAGCAGTTGTGTCACTTTGGGCACCAGTAATCTTGGTTTATTTGATGGACACTCAAATATGGTATGCTATCTTTCAGACTTTGTATGGTGGTGTTGTTGGGGCATTTGATCGCCTAGGAGAGATTCGGACACTTGGTATGCTGAGATCACGGTTCCAGTCTCTACCCGGTGCATTCAACACATACCTAGTGCCTTCAGATAAGTCAACAAAAAGGGGATTCTCTTTCTCAAAGCGTTTTGTGGAGATTACAGCAAGCAGGAGAAGTGAAGCTGCAAAGTTTGCTCAGATGTGGAATGAAGTGATATGTAGCTTCCGTGAGGAAGATATCATAAATGACAGGGAAATGGATTTGCTGCTAGTTCCTTATTCATCAGATCCCAGCCTGAAGATAATTCAGTGGCCACCCTTCTTGCTTGCTAGCAAAATCCCAATAGCATTAGATATGGCAGTTCAATTTAAATCGAAGGACTCCGATCTCTGGAAGCGGATATGTGCAGATGAATATATGAAATGTGCTGTGATTGAATGTTATGAATCTTTCAAACATATCCTTAGTACTCTGGTAGTTGGAGAAAATGAGAAAAGGATAATTGGCATCATCGTGAAGGAAATTGAAAGTAACATTTCAAAGAATACATTTCTTGTAAATTTTAGAATGGGTTCTTTGCCCACTCTTTGCAATAAATTTGTAGAGCTTGTGAGGATCTTGAAAGATGGTGATTCATCCAAGCGATCTTCAGTGGTGTTGTTGCTTCAAGATATGCTGGAAGTAGTCACTCGGGATATGATGGTGAATGAGATCCGAGAGTTGGTTGAAGTTGGTCATAGTAGCAAGGATGCTGGAAGGCAACTTTTTGCTGGAACTGATGCAAAACCTGCAATATTATTCCCTCCTCCAGTTACAGCACGGTGGGAAGAGCAGATAAGCCGCCTCCATCTTCTGCTAACAGTGAAGGAATCTGCCATTGACGTACCAACAAACCTAGAAGCACGTAGAAGGATTGCATTTTTTACAAATTCATTGTTCATGGATATGCCACGTGCTCCCCGAGTCCGTAAAATGCTTTCATTCAGCATCATGACCCCATACTATAGTGAGGAGACTGTGTATTCCAAATCAGACCTTGAGATGGAAAATGAAGATGGTGTATCAATCATATACTACTTACAGAAGATTTTCCCAGATGAATGGAATAACTTCATGGAGCGCCTTAATTGTAAAAAGGATAGTGAAATATGGGAGAATGAAGAAAACATTTTGCATCTTCGTCATTGGGTCTCCTTACGAGGACAAACTCTCTGCAGGACTGTTAGAGGAATGATGTACTACCGACGAGCACTGAAGCTTCAGGCTTTTCTTGACATGGCTACTGAAACCGATATACTAGATGGCTACAAAGCAATCATGGTTCCACCAGAAGAAGAAAAGAAAAGCCAGAGATCGATCCTTTATGCTCAATTAGAAGCAGTGGCTGACCTTAAGTTCACCTATGTTGCTACCTGCCAAAACTATGGCAATCAGAAACGCAGTGGAGATCGACGTGCAACAGACATCTTGAATCTGATGGTTAATAATCCCTCTCTTCGGGTTGCATATATCGATGAAGTTGAAGAGAGTGACGCTGGTAGTGGAAAGGTGCAAAAGGTTTACTACTCTGTCTTGGTCAAAGCTGTTGACAATCATGACCAGGAAATATATCGTATAAAATTGCCTGGTTCGGCAAAGATTGGAGAAGGAAAACCTGAAAACCAGAACCATGCTATAATTTTTACTCGAGGAGAAGCTCTTCAGGCCATTGACATGAACCAGGACAATTACTTAGAAGAAGCTTTTAAAATGCGAAACCTTCTTGAAGAATTTAATGAGGACCATGGAGTGCGTCCACCTTCAATTTTAGGTGTTCGTGAGCATATCTTTACTGGAAGTGTTTCTTCATTGGCCTGGTTTATGTCAAATCAAGAAATGAGCTTTGTGACCATAGGTCAAAGAGTTCTTGCAAGACCTTTGAAGATTCGCTTCCACTATGGACACCCAGATGTCTTTGATAGAATCTTCCACATTACTCGTGGTGGCATGAGCAAGGCTTCCCGTGGCATCAATCTTAGCGAGGACATCTTTGCGGGTTTTAACTCAACGTTAAGGAGAGGCAATATAACCCACCATGAATATATTCAAGTTGGGAAGGGTAGGGATGTTGGGCTCAACCAAATCTCTCTCTTTGAAGCTAAAGTTGCTTGTGGTAATGGAGAGCAGACGCTTAGCAGGGATATCTACCGCTTGGGGCACCGTTTTGACTTCTTTCGCATGTTGTCCTGTTATTTTTCAACAATAGGGTTTTATATCAGCGCAATGTTGGTTGTCCTTACAGTCTATGCTTTCTTGTACGGAAGACTTTACTTGTCATTAAGTGGAATGGAGAAGACAATTGTGAACTATGCCGCCACCAGGGGAAATAATGTTCTACAAACAGCCATGGCTTCACAATCTGTTTTCCAATTAGGTCTTTTAACTTCCTTGCCCATGATCATGGAAATTGGACTAGAAAGAGGGTTCAGAACTGCATTAGGGGACATGATAATCATGCAGCTGCAACTAGCATCTGTTTTCTTCACCTTCTCTCTCGGTACAAAAGTTCATTATTTTGGCCGAACAGTGCTGCACGGCGGGGCTAAATACAGAGCAACTGGCCGTGGCTTTGTTGTCCGGCATGAAAAGTTTGCCGAGAACTACAGGATGTACTCAAGGAGTCACTTTGTGAAAGGCCTCGAACTTATGGTACTTCTTATAGTTTATCAGATATATGGTTCAGCAGTAAAAGGCACAATATCGTATATCTTTGTCACATTCTCCATGTGGTTCTTAGTGGTTTCGTGGCTGTTCGCTCCGTTCCTGTTTAACCCTTCGGGATTTGAATGGCAAAAGATAGTCGAAGATTGGGATGATTGGGCAAAATGGATAAGTAGCCCTGGTGGTATTGGTGTGCCAGCGACCAAGAGCTGGGAGTCTTGGTGGGATGAGGAACAAGAACACCTCCACCACACAGGGGTTTTGGGACGATTTTGGGAGATTGTTCTTGCTCTGCGCTTCTTTCTTTTCCAATACGGAATTGTGTACCATCTAAATGTGGCCAGGGGTGATAAAAGCATCATGGTTTATGGTCTGTCATGGTTGGTCATTGTCGCTGTGATGATCATCCTAAAGGTTGTGTCAATGGGAAGACAGCGGTTCAGTGCAGATTTCCAGCTGATGTTCAGGCTTCTCAAGTTGTTCCTGTTTATTGGGTTTGTTGTCACTATTGGAATGCTTTTTGCTTTCCTCAGTCTTACTGTTGGTGACATCTTTGTGAGCTTATTGGCCTTCTTGCCTACTGGATGGGCGCTACTACTGATGTCACAAGCGTGCAAGCCATTGGTGAAGGTCCTTGGAATGTGGGGATCTGTCAAAGCTCTAGCAAAAGGGTATGAGTACGTGATGGGGCTCGTCATCTTCGCACCAGTAGCTGTTCTTGCATGGTTCCCGTTTGTCTCAGAGTTCCAGACCAGGCTGCTATTCAACCAAGCTTTCAGCCGAGGGCTCCAGATCCAGCGTATTCTTGCTGGTGGGAAGAAGCACAAGTCAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000271 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0005975 GO:0005976 GO:0006073 GO:0006074 GO:0006075 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009555 GO:0009556 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010208 GO:0010769 GO:0010927 GO:0016043 GO:0016049 GO:0016051 GO:0019953 GO:0022402 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0030154 GO:0030198 GO:0032501 GO:0032502 GO:0032989 GO:0033692 GO:0034293 GO:0034637 GO:0034645 GO:0040007 GO:0040008 GO:0043062 GO:0043170 GO:0043900 GO:0043934 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044703 GO:0044706 GO:0045229 GO:0045595 GO:0048229 GO:0048236 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048646 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051239 GO:0051273 GO:0051274 GO:0051321 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0071704 GO:0071840 GO:0080092 GO:0085029 GO:1901576 GO:1903046 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKS1_dom1 Glucan_synthase Vta1

Protein Analysis

1720

Amino Acids

198.21

Weight (kDa)

9.18

Isoelectric Point (pI)

41.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FKS1_dom1	PF14288	121 - 232	2.5e-41	1,3-beta-glucan synthase subunit FKS1, domain-1
CALS1	PF25968	646 - 829	1.6e-67	Callose synthase 1 domain
Glucan_synthase	PF02364	836 - 923	2.4e-26	1,3-beta-glucan synthase component
Glucan_synthase	PF02364	927 - 1531	5e-208	1,3-beta-glucan synthase component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0007588)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13680
fragaria_vesca	FvH4_1g24300
malus_domestica	MD01G1004000.v1.1 MD01G1004100.v1.1 MD02G1211500.v1.1
prunus_persica	Prupe.4G271000_v2.0.a1
pyrus_communis	pycom01g02040 pycom15g30380
rosa_chinensis	RchiOBHm_Chr2g0120781
rosa_laevigata	RLG00000018581 RLG00000018588
rosa_roxburghii	Rroxscaffold_2G00122840 Rroxscaffold_2G00122950
rosa_rugosa	Rorug02G0231300
rosa_samantha	Rh2AG287900 Rh2AG288000 Rh2AG288100 Rh2BG299200 Rh2BG299300 Rh2CG277200 Rh2CG277300 Rh2DG313100 Rh2DG313200
rosa_wichuraiana	Rw2G023080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	563
Acc36I	ACCTGC	2 cut(s)	2419, 3044
AccB1I	GGYRCC	2 cut(s)	1555, 3819
AccB7I	CCANNNNNTGG	1 cut(s)	4533
AccI	GTMKAC	1 cut(s)	1379
AccII	CGCG	2 cut(s)	733, 978
AclI	AACGTT	1 cut(s)	3671
AclWI	GGATC	6 cut(s)	1904, 2246, 2329, 2974, 4978, 5110
AcoI	YGGCCR	4 cut(s)	1934, 4180, 4222, 4662
AcsI	RAATTY	6 cut(s)	1225, 1505, 2182, 2219, 2551, 3392
AcuI	CTGAAG	6 cut(s)	1713, 1940, 2256, 2867, 2897, 3308
AcvI	CACGTG	1 cut(s)	2576
AdeI	CACNNNGTG	1 cut(s)	4291
AfiI	CCNNNNNNNGG	8 cut(s)	527, 2013, 2344, 2665, 3120, 3981, 4533, 4579
AflII	CTTAAG	2 cut(s)	1163, 3014
AflIII	ACRYGT	1 cut(s)	731
AgeI	ACCGGT	1 cut(s)	840
AhdI	GACNNNNNGTC	1 cut(s)	3516
AjiI	CACGTC	1 cut(s)	3077
AjnI	CCWGG	8 cut(s)	3222, 3247, 3342, 3476, 3980, 4501, 4664, 5075
AleI	CACNNNNGTG	1 cut(s)	4933
AloI	GAACNNNNNNTCC	2 cut(s)	3978, 4010
Alw21I	GWGCWC	3 cut(s)	37, 2581, 2875
Alw26I	GTCTC	6 cut(s)	319, 1458, 1698, 2630, 2818, 5065
Alw44I	GTGCAC	1 cut(s)	33
AlwI	GGATC	6 cut(s)	1904, 2246, 2329, 2974, 4978, 5110
AlwNI	CAGNNNCTG	3 cut(s)	877, 3008, 5036
Ama87I	CYCGRG	4 cut(s)	1015, 2313, 2583, 3309
ApaLI	GTGCAC	1 cut(s)	33
ApoI	RAATTY	6 cut(s)	1225, 1505, 2182, 2219, 2551, 3392
AsiGI	ACCGGT	1 cut(s)	840
Asp700I	GAANNNNTTC	6 cut(s)	2194, 2711, 2732, 3321, 3463, 3705
AspA2I	CCTAGG	1 cut(s)	1648
AspLEI	GCGC	4 cut(s)	2745, 3884, 4620, 4915
AspS9I	GGNCC	5 cut(s)	123, 696, 849, 3403, 4954
AsuC2I	CCSGG	3 cut(s)	1016, 1017, 1701
AsuNHI	GCTAGC	1 cut(s)	1952
AvaI	CYCGRG	4 cut(s)	1015, 2313, 2583, 3309
AvaII	GGWCC	3 cut(s)	849, 3403, 4954
AvrII	CCTAGG	1 cut(s)	1648
BaeGI	GKGCMC	3 cut(s)	37, 1558, 3822
BaeI	ACNNNNGTAYC	2 cut(s)	4152, 4185
BalI	TGGCCA	2 cut(s)	1936, 4664
BanI	GGYRCC	2 cut(s)	1555, 3819
BanII	GRGCYC	4 cut(s)	761, 3738, 5016, 5112
BarI	GAAGNNNNNNTAC	2 cut(s)	353, 385
BauI	CACGAG	2 cut(s)	48, 3600
BbrPI	CACGTG	1 cut(s)	2576
BbsI	GAAGAC	3 cut(s)	3931, 3962, 4759
Bbv12I	GWGCWC	3 cut(s)	37, 2581, 2875
BbvCI	CCTCAGC	1 cut(s)	119
BceAI	ACGGC	2 cut(s)	4209, 4213
BciT130I	CCWGG	8 cut(s)	3224, 3249, 3344, 3478, 3982, 4503, 4666, 5077
BclI	TGATCA	2 cut(s)	4059, 4725
BcnI	CCSGG	3 cut(s)	1016, 1017, 1701
BcoDI	GTCTC	6 cut(s)	319, 1458, 1698, 2630, 2818, 5065
BfmI	CTRYAG	5 cut(s)	24, 869, 2626, 2836, 4264
BfoI	RGCGCY	2 cut(s)	2746, 4916
BfrI	CTTAAG	2 cut(s)	1163, 3014
BfuAI	ACCTGC	2 cut(s)	2419, 3044
BglII	AGATCT	1 cut(s)	940
BlnI	CCTAGG	1 cut(s)	1648
BlpI	GCTNAGC	1 cut(s)	3794
BmcAI	AGTACT	1 cut(s)	2092
Bme18I	GGWCC	3 cut(s)	849, 3403, 4954
BmeRI	GACNNNNNGTC	1 cut(s)	3516
BmeT110I	CYCGRG	4 cut(s)	1015, 2313, 2583, 3309
BmgBI	CACGTC	1 cut(s)	3077
BmgT120I	GGNCC	5 cut(s)	123, 696, 849, 3403, 4954
BmiI	GGNNCC	7 cut(s)	158, 1557, 1688, 2946, 3821, 5051, 5111
BmrI	ACTGGG	1 cut(s)	513
BmsI	GCATC	9 cut(s)	244, 2139, 2362, 2392, 2619, 2806, 3639, 4142, 4689
BmtI	GCTAGC	1 cut(s)	1956
BmuI	ACTGGG	1 cut(s)	513
BpiI	GAAGAC	3 cut(s)	3931, 3962, 4759
BpmI	CTGGAG	2 cut(s)	2415, 5096
Bpu10I	CCTNAGC	1 cut(s)	119
Bpu1102I	GCTNAGC	1 cut(s)	3794
BpuEI	CTTGAG	4 cut(s)	1046, 2681, 4261, 4781
BpuMI	CCSGG	3 cut(s)	1016, 1017, 1701
Bsa29I	ATCGAT	2 cut(s)	2978, 3135
BsaAI	YACGTR	3 cut(s)	2528, 2576, 5005
BsaBI	GATNNNNATC	1 cut(s)	4727
BsaI	GGTCTC	1 cut(s)	2818
BsaWI	WCCGGW	1 cut(s)	840
BsaXI	ACNNNNNCTCC	6 cut(s)	1527, 1557, 2627, 2657, 4529, 4559
Bsc4I	CCNNNNNNNGG	8 cut(s)	527, 2013, 2344, 2665, 3120, 3981, 4533, 4579
Bse118I	RCCGGY	1 cut(s)	840
Bse3DI	GCAATG	1 cut(s)	3891
Bse8I	GATNNNNATC	1 cut(s)	4727
BseBI	CCWGG	8 cut(s)	3224, 3249, 3344, 3478, 3982, 4503, 4666, 5077
BseCI	ATCGAT	2 cut(s)	2978, 3135
BseJI	GATNNNNATC	1 cut(s)	4727
BseLI	CCNNNNNNNGG	8 cut(s)	527, 2013, 2344, 2665, 3120, 3981, 4533, 4579
BseMI	GCAATG	1 cut(s)	3891
BseMII	CTCAG	6 cut(s)	110, 1296, 1667, 1832, 4867, 5076
BseRI	GAGGAG	4 cut(s)	612, 2418, 2648, 3327
BseSI	GKGCMC	3 cut(s)	37, 1558, 3822
BseYI	CCCAGC	2 cut(s)	1913, 4533
BsgI	GTGCAG	4 cut(s)	764, 2049, 4178, 4788
Bsh1236I	CGCG	2 cut(s)	733, 978
BshNI	GGYRCC	2 cut(s)	1555, 3819
BshTI	ACCGGT	1 cut(s)	840
BshVI	ATCGAT	2 cut(s)	2978, 3135
BsiHKAI	GWGCWC	3 cut(s)	37, 2581, 2875
BsiHKCI	CYCGRG	4 cut(s)	1015, 2313, 2583, 3309
BsiSI	CCGG	4 cut(s)	841, 1016, 1701, 4240
BslFI	GGGAC	2 cut(s)	4118, 4602
BslI	CCNNNNNNNGG	8 cut(s)	527, 2013, 2344, 2665, 3120, 3981, 4533, 4579
BsmAI	GTCTC	6 cut(s)	319, 1458, 1698, 2630, 2818, 5065
BsmFI	GGGAC	2 cut(s)	4118, 4602
BsmI	GAATGC	5 cut(s)	71, 1114, 1353, 1706, 4842
Bso31I	GGTCTC	1 cut(s)	2818
BsoBI	CYCGRG	4 cut(s)	1015, 2313, 2583, 3309
Bsp1286I	GDGCHC	9 cut(s)	37, 761, 1558, 2581, 2875, 3738, 3822, 5016, 5112
Bsp1720I	GCTNAGC	1 cut(s)	3794
Bsp19I	CCATGG	3 cut(s)	469, 3406, 4008
BspCNI	CTCAG	6 cut(s)	111, 1295, 1668, 1831, 4866, 5075
BspDI	ATCGAT	2 cut(s)	2978, 3135
BspFNI	CGCG	2 cut(s)	733, 978
BspHI	TCATGA	2 cut(s)	2613, 3217
BspLI	GGNNCC	7 cut(s)	158, 1557, 1688, 2946, 3821, 5051, 5111
BspMAI	CTGCAG	2 cut(s)	28, 2840
BspMI	ACCTGC	2 cut(s)	2419, 3044
BspOI	GCTAGC	1 cut(s)	1956
BspPI	GGATC	6 cut(s)	1904, 2246, 2329, 2974, 4978, 5110
BspQI	GCTCTTC	2 cut(s)	2445, 3327
BspT107I	GGYRCC	2 cut(s)	1555, 3819
BspTI	CTTAAG	2 cut(s)	1163, 3014
BspTNI	GGTCTC	1 cut(s)	2818
BsrDI	GCAATG	1 cut(s)	3891
BsrFI	RCCGGY	1 cut(s)	840
BssAI	RCCGGY	1 cut(s)	840
BssNAI	GTATAC	1 cut(s)	1380
BssSI	CACGAG	2 cut(s)	48, 3600
BssT1I	CCWWGG	6 cut(s)	334, 469, 1648, 3406, 4008, 4957
Bst1107I	GTATAC	1 cut(s)	1380
Bst2BI	CACGAG	2 cut(s)	48, 3600
Bst2UI	CCWGG	8 cut(s)	3224, 3249, 3344, 3478, 3982, 4503, 4666, 5077
Bst6I	CTCTTC	5 cut(s)	6, 2445, 3123, 3141, 3327
BstAFI	CTTAAG	2 cut(s)	1163, 3014
BstAPI	GCANNNNNTGC	3 cut(s)	32, 1814, 2411
BstBAI	YACGTR	3 cut(s)	2528, 2576, 5005
BstC8I	GCNNGC	8 cut(s)	94, 1408, 1789, 1950, 1954, 4521, 4936, 4940
BstDSI	CCRYGG	5 cut(s)	469, 3406, 3625, 4008, 4225
BstFNI	CGCG	2 cut(s)	733, 978
BstH2I	RGCGCY	2 cut(s)	2746, 4916
BstHHI	GCGC	4 cut(s)	2745, 3884, 4620, 4915
BstMAI	GTCTC	6 cut(s)	319, 1458, 1698, 2630, 2818, 5065
BstMWI	GCNNNNNNNGC	9 cut(s)	32, 254, 872, 1814, 2411, 3326, 3767, 5033, 5042
BstNI	CCWGG	8 cut(s)	3224, 3249, 3344, 3478, 3982, 4503, 4666, 5077
BstNSI	RCATGY	1 cut(s)	3844
BstSFI	CTRYAG	5 cut(s)	24, 869, 2626, 2836, 4264
BstSLI	GKGCMC	3 cut(s)	37, 1558, 3822
BstUI	CGCG	2 cut(s)	733, 978
BstV2I	GAAGAC	3 cut(s)	3931, 3962, 4759
BstX2I	RGATCY	6 cut(s)	940, 1909, 2238, 2334, 4970, 5115
BstXI	CCANNNNNNTGG	3 cut(s)	2724, 3047, 4063
BstYI	RGATCY	6 cut(s)	940, 1909, 2238, 2334, 4970, 5115
BstZ17I	GTATAC	1 cut(s)	1380
Bsu15I	ATCGAT	2 cut(s)	2978, 3135
BsuTUI	ATCGAT	2 cut(s)	2978, 3135
BtgI	CCRYGG	5 cut(s)	469, 3406, 3625, 4008, 4225
BtrI	CACGTC	1 cut(s)	3077
BtsI	GCAGTG	3 cut(s)	33, 3009, 3070
BveI	ACCTGC	2 cut(s)	2419, 3044
Cac8I	GCNNGC	8 cut(s)	94, 1408, 1789, 1950, 1954, 4521, 4936, 4940
CaiI	CAGNNNCTG	3 cut(s)	877, 3008, 5036
CciI	TCATGA	2 cut(s)	2613, 3217
CfoI	GCGC	4 cut(s)	2745, 3884, 4620, 4915
Cfr10I	RCCGGY	1 cut(s)	840
Cfr13I	GGNCC	5 cut(s)	123, 696, 849, 3403, 4954
Cfr9I	CCCGGG	1 cut(s)	1015
ClaI	ATCGAT	2 cut(s)	2978, 3135
CseI	GACGC	4 cut(s)	967, 3164, 3404, 3799
CspAI	ACCGGT	1 cut(s)	840
CspCI	CAANNNNNGTGG	2 cut(s)	1926, 1961
DraI	TTTAAA	3 cut(s)	1008, 1993, 3370
DraIII	CACNNNGTG	1 cut(s)	4291
DriI	GACNNNNNGTC	1 cut(s)	3516
EaeI	YGGCCR	4 cut(s)	1934, 4180, 4222, 4662
Eam1104I	CTCTTC	5 cut(s)	6, 2445, 3123, 3141, 3327
Eam1105I	GACNNNNNGTC	1 cut(s)	3516
EarI	CTCTTC	5 cut(s)	6, 2445, 3123, 3141, 3327
Eco130I	CCWWGG	6 cut(s)	334, 469, 1648, 3406, 4008, 4957
Eco147I	AGGCCT	1 cut(s)	4299
Eco24I	GRGCYC	4 cut(s)	761, 3738, 5016, 5112
Eco31I	GGTCTC	1 cut(s)	2818
Eco32I	GATATC	3 cut(s)	1022, 1861, 3805
Eco47I	GGWCC	3 cut(s)	849, 3403, 4954
Eco57I	CTGAAG	6 cut(s)	1713, 1940, 2256, 2867, 2897, 3308
Eco72I	CACGTG	1 cut(s)	2576
Eco88I	CYCGRG	4 cut(s)	1015, 2313, 2583, 3309
EcoO109I	RGGNCCY	1 cut(s)	4954
EcoRII	CCWGG	8 cut(s)	3222, 3247, 3342, 3476, 3980, 4501, 4664, 5075
EcoRV	GATATC	3 cut(s)	1022, 1861, 3805
EcoT14I	CCWWGG	6 cut(s)	334, 469, 1648, 3406, 4008, 4957
EcoT22I	ATGCAT	1 cut(s)	1353
EcoT38I	GRGCYC	4 cut(s)	761, 3738, 5016, 5112
ErhI	CCWWGG	6 cut(s)	334, 469, 1648, 3406, 4008, 4957
FalI	AAGNNNNNCTT	4 cut(s)	3451, 3483, 3536, 3568
FaqI	GGGAC	2 cut(s)	4118, 4602
FauI	CCCGC	3 cut(s)	1263, 3649, 4193
FauNDI	CATATG	1 cut(s)	460
FbaI	TGATCA	2 cut(s)	4059, 4725
FblI	GTMKAC	1 cut(s)	1379
FriOI	GRGCYC	4 cut(s)	761, 3738, 5016, 5112
GlaI	GCGC	4 cut(s)	2744, 3883, 4619, 4914
GsaI	CCCAGC	2 cut(s)	1917, 4537
GsuI	CTGGAG	2 cut(s)	2415, 5096
HaeII	RGCGCY	2 cut(s)	2746, 4916
HapII	CCGG	4 cut(s)	841, 1016, 1701, 4240
HgaI	GACGC	4 cut(s)	967, 3164, 3404, 3799
HhaI	GCGC	4 cut(s)	2745, 3884, 4620, 4915
Hin6I	GCGC	4 cut(s)	2743, 3882, 4618, 4913
HinP1I	GCGC	4 cut(s)	2743, 3882, 4618, 4913
HincII	GTYRAC	2 cut(s)	1740, 3211
HindII	GTYRAC	2 cut(s)	1740, 3211
HindIII	AAGCTT	3 cut(s)	2879, 3363, 5094
HpaII	CCGG	4 cut(s)	841, 1016, 1701, 4240
Hpy99I	CGWCG	4 cut(s)	1269, 1485, 2871, 3078
HpyCH4IV	ACGT	8 cut(s)	150, 290, 2505, 2527, 2575, 3076, 3671, 5004
HpyF10VI	GCNNNNNNNGC	9 cut(s)	32, 254, 872, 1814, 2411, 3326, 3767, 5033, 5042
HpySE526I	ACGT	8 cut(s)	150, 290, 2505, 2527, 2575, 3076, 3671, 5004
HspAI	GCGC	4 cut(s)	2743, 3882, 4618, 4913
Ksp22I	TGATCA	2 cut(s)	4059, 4725
LguI	GCTCTTC	2 cut(s)	2445, 3327
LmnI	GCTCC	7 cut(s)	166, 625, 1535, 2584, 2740, 4423, 5115
LweI	GCATC	9 cut(s)	244, 2139, 2362, 2392, 2619, 2806, 3639, 4142, 4689
MaeII	ACGT	8 cut(s)	150, 290, 2505, 2527, 2575, 3076, 3671, 5004
MfeI	CAATTG	1 cut(s)	3960
MflI	RGATCY	6 cut(s)	940, 1909, 2238, 2334, 4970, 5115
MhlI	GDGCHC	9 cut(s)	37, 761, 1558, 2581, 2875, 3738, 3822, 5016, 5112
MlsI	TGGCCA	2 cut(s)	1936, 4664
MluI	ACGCGT	1 cut(s)	731
MluNI	TGGCCA	2 cut(s)	1936, 4664
MlyI	GAGTC	4 cut(s)	1997, 2595, 4291, 4547
MmeI	TCCRAC	2 cut(s)	1288, 2083
Mox20I	TGGCCA	2 cut(s)	1936, 4664
Mph1103I	ATGCAT	1 cut(s)	1353
MroXI	GAANNNNTTC	6 cut(s)	2194, 2711, 2732, 3321, 3463, 3705
MscI	TGGCCA	2 cut(s)	1936, 4664
MslI	CAYNNNNRTG	8 cut(s)	2135, 2567, 3335, 3570, 4061, 4656, 4877, 4933
Msp20I	TGGCCA	2 cut(s)	1936, 4664
MspA1I	CMGCKG	5 cut(s)	965, 1258, 4123, 4759, 4780
MspCI	CTTAAG	2 cut(s)	1163, 3014
MspI	CCGG	4 cut(s)	841, 1016, 1701, 4240
MunI	CAATTG	1 cut(s)	3960
Mva1269I	GAATGC	5 cut(s)	71, 1114, 1353, 1706, 4842
MvaI	CCWGG	8 cut(s)	3224, 3249, 3344, 3478, 3982, 4503, 4666, 5077
MvnI	CGCG	2 cut(s)	733, 978
MwoI	GCNNNNNNNGC	9 cut(s)	32, 254, 872, 1814, 2411, 3326, 3767, 5033, 5042
NciI	CCSGG	3 cut(s)	1016, 1017, 1701
NcoI	CCATGG	3 cut(s)	469, 3406, 4008
NdeI	CATATG	1 cut(s)	460
NheI	GCTAGC	1 cut(s)	1952
NlaIV	GGNNCC	7 cut(s)	158, 1557, 1688, 2946, 3821, 5051, 5111
NmeAIII	GCCGAG	2 cut(s)	4282, 5129
NsiI	ATGCAT	1 cut(s)	1353
NspI	RCATGY	1 cut(s)	3844
OliI	CACNNNNGTG	1 cut(s)	4933
PaeR7I	CTCGAG	1 cut(s)	3309
PagI	TCATGA	2 cut(s)	2613, 3217
PceI	AGGCCT	1 cut(s)	4299
PciSI	GCTCTTC	2 cut(s)	2445, 3327
PcsI	WCGNNNNNNNCGW	1 cut(s)	2581
PctI	GAATGC	5 cut(s)	71, 1114, 1353, 1706, 4842
PdmI	GAANNNNTTC	6 cut(s)	2194, 2711, 2732, 3321, 3463, 3705
PflMI	CCANNNNNTGG	1 cut(s)	4533
PinAI	ACCGGT	1 cut(s)	840
PleI	GAGTC	4 cut(s)	1997, 2594, 4290, 4546
PmaCI	CACGTG	1 cut(s)	2576
PmlI	CACGTG	1 cut(s)	2576
PpsI	GAGTC	4 cut(s)	1997, 2594, 4290, 4546
Ppu21I	YACGTR	3 cut(s)	2528, 2576, 5005
PpuMI	RGGWCCY	1 cut(s)	4954
PsiI	TTATAA	1 cut(s)	563
Psp1406I	AACGTT	1 cut(s)	3671
Psp5II	RGGWCCY	1 cut(s)	4954
Psp6I	CCWGG	8 cut(s)	3222, 3247, 3342, 3476, 3980, 4501, 4664, 5075
PspCI	CACGTG	1 cut(s)	2576
PspFI	CCCAGC	2 cut(s)	1913, 4533
PspGI	CCWGG	8 cut(s)	3222, 3247, 3342, 3476, 3980, 4501, 4664, 5075
PspN4I	GGNNCC	7 cut(s)	158, 1557, 1688, 2946, 3821, 5051, 5111
PspPI	GGNCC	5 cut(s)	123, 696, 849, 3403, 4954
PspPPI	RGGWCCY	1 cut(s)	4954
PspXI	VCTCGAGB	1 cut(s)	3309
PsrI	GAACNNNNNNTAC	2 cut(s)	4296, 4328
PstI	CTGCAG	2 cut(s)	28, 2840
PstNI	CAGNNNCTG	3 cut(s)	877, 3008, 5036
PsuI	RGATCY	6 cut(s)	940, 1909, 2238, 2334, 4970, 5115
PvuII	CAGCTG	2 cut(s)	4123, 4780
RseI	CAYNNNNRTG	8 cut(s)	2135, 2567, 3335, 3570, 4061, 4656, 4877, 4933
SapI	GCTCTTC	2 cut(s)	2445, 3327
Sau96I	GGNCC	5 cut(s)	123, 696, 849, 3403, 4954
ScaI	AGTACT	1 cut(s)	2092
SchI	GAGTC	4 cut(s)	1997, 2595, 4291, 4547
SduI	GDGCHC	9 cut(s)	37, 761, 1558, 2581, 2875, 3738, 3822, 5016, 5112
SfaNI	GCATC	9 cut(s)	244, 2139, 2362, 2392, 2619, 2806, 3639, 4142, 4689
SfcI	CTRYAG	5 cut(s)	24, 869, 2626, 2836, 4264
Sfr274I	CTCGAG	1 cut(s)	3309
SinI	GGWCC	3 cut(s)	849, 3403, 4954
SlaI	CTCGAG	1 cut(s)	3309
SmaI	CCCGGG	1 cut(s)	1017
SmiI	ATTTAAAT	1 cut(s)	1993
SmiMI	CAYNNNNRTG	8 cut(s)	2135, 2567, 3335, 3570, 4061, 4656, 4877, 4933
SmlI	CTYRAG	7 cut(s)	1061, 1163, 2660, 3014, 3309, 4276, 4796
SmoI	CTYRAG	7 cut(s)	1061, 1163, 2660, 3014, 3309, 4276, 4796
SseBI	AGGCCT	1 cut(s)	4299
SspI	AATATT	4 cut(s)	302, 662, 1057, 2418
StuI	AGGCCT	1 cut(s)	4299
StyI	CCWWGG	6 cut(s)	334, 469, 1648, 3406, 4008, 4957
SwaI	ATTTAAAT	1 cut(s)	1993
TaiI	ACGT	8 cut(s)	153, 293, 2508, 2530, 2578, 3079, 3674, 5007
TatI	WGTACW	5 cut(s)	1045, 1150, 2090, 2859, 4272
TauI	GCSGC	4 cut(s)	968, 1238, 2466, 3977
TspGWI	ACGGA	6 cut(s)	568, 1838, 2579, 3936, 4410, 4653
TspMI	CCCGGG	1 cut(s)	1015
Van91I	CCANNNNNTGG	1 cut(s)	4533
Vha464I	CTTAAG	2 cut(s)	1163, 3014
VneI	GTGCAC	1 cut(s)	33
VpaK11BI	GGWCC	3 cut(s)	849, 3403, 4954
XapI	RAATTY	6 cut(s)	1225, 1505, 2182, 2219, 2551, 3392
XbaI	TCTAGA	1 cut(s)	761
XceI	RCATGY	1 cut(s)	3844
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3599
XhoI	CTCGAG	1 cut(s)	3309
XmaI	CCCGGG	1 cut(s)	1015
XmaJI	CCTAGG	1 cut(s)	1648
XmiI	GTMKAC	1 cut(s)	1379
XmnI	GAANNNNTTC	6 cut(s)	2194, 2711, 2732, 3321, 3463, 3705
ZrmI	AGTACT	1 cut(s)	2092
Zsp2I	ATGCAT	1 cut(s)	1353

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.