Non-catalytic subunit of the queuine tRNA- ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, - His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7- deazaguanosine)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g32910 FvH4_5g32910 |
| malus_domestica | MD15G1399400.v1.1 |
| prunus_persica | Prupe.1G546900_v2.0.a1 Prupe.1G546900_v2.0.a1 Prupe.1G546900_v2.0.a1 Prupe.1G546900_v2.0.a1 |
| pyrus_communis | pycom15g35840 |
| rosa_chinensis | RchiOBHm_Chr7g0224381 RchiOBHm_Chr7g0230881 |
| rosa_laevigata | RLG00000001455 RLG00000002175 |
| rosa_multiflora | Rmu_sc0000483.1_g000007 Rmu_sc0000551.1_g000016 Rmu_sc0006366.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00238700 |
| rosa_rugosa | Rorug07G0201000 Rorug07G0262800 |
| rosa_samantha | Rh7AG380700 Rh7AG416100 Rh7BG330800 Rh7BG392100 Rh7CG400100 Rh7CG435100 Rh7DG410600 |
| rosa_wichuraiana | Rw7G031120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 683, 1179 |
| Acc36I | ACCTGC | 2 cut(s) | 683, 1179 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 358, 582, 763 |
| AccBSI | CCGCTC | 1 cut(s) | 183 |
| AccII | CGCG | 2 cut(s) | 196, 1185 |
| AciI | CCGC | 5 cut(s) | 58, 183, 186, 196, 981 |
| AclWI | GGATC | 1 cut(s) | 718 |
| AcsI | RAATTY | 3 cut(s) | 161, 491, 1298 |
| AcuI | CTGAAG | 2 cut(s) | 714, 1353 |
| AcvI | CACGTG | 1 cut(s) | 1137 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 358, 428, 429, 582, 707, 763, 1007 |
| AflIII | ACRYGT | 1 cut(s) | 1134 |
| AgsI | TTSAA | 4 cut(s) | 387, 461, 571, 954 |
| AluBI | AGCT | 7 cut(s) | 139, 222, 345, 682, 1088, 1157, 1337 |
| AluI | AGCT | 7 cut(s) | 139, 222, 345, 682, 1088, 1157, 1337 |
| Alw26I | GTCTC | 5 cut(s) | 151, 233, 335, 503, 622 |
| AlwI | GGATC | 1 cut(s) | 718 |
| AoxI | GGCC | 1 cut(s) | 271 |
| ApeKI | GCWGC | 9 cut(s) | 219, 222, 929, 1328, 1337, 1340, 1343, 1346, 1349 |
| ApoI | RAATTY | 3 cut(s) | 161, 491, 1298 |
| AseI | ATTAAT | 1 cut(s) | 1071 |
| AspLEI | GCGC | 1 cut(s) | 196 |
| AspS9I | GGNCC | 4 cut(s) | 198, 271, 585, 698 |
| AsuC2I | CCSGG | 1 cut(s) | 202 |
| AsuHPI | GGTGA | 4 cut(s) | 277, 363, 1098, 1160 |
| AsuNHI | GCTAGC | 1 cut(s) | 767 |
| AvaII | GGWCC | 3 cut(s) | 198, 585, 698 |
| BaeGI | GKGCMC | 1 cut(s) | 757 |
| BbrPI | CACGTG | 1 cut(s) | 1137 |
| BbsI | GAAGAC | 1 cut(s) | 720 |
| BbvI | GCAGC | 9 cut(s) | 209, 231, 916, 1315, 1324, 1327, 1330, 1333, 1336 |
| BccI | CCATC | 3 cut(s) | 654, 975, 1001 |
| BceAI | ACGGC | 1 cut(s) | 510 |
| BclI | TGATCA | 1 cut(s) | 885 |
| BcnI | CCSGG | 1 cut(s) | 202 |
| BcoDI | GTCTC | 5 cut(s) | 151, 233, 335, 503, 622 |
| BfaI | CTAG | 3 cut(s) | 768, 1208, 1235 |
| BfuAI | ACCTGC | 2 cut(s) | 683, 1179 |
| BglII | AGATCT | 1 cut(s) | 1099 |
| Bme1390I | CCNGG | 1 cut(s) | 202 |
| Bme18I | GGWCC | 3 cut(s) | 198, 585, 698 |
| BmgT120I | GGNCC | 4 cut(s) | 198, 271, 585, 698 |
| BmrFI | CCNGG | 1 cut(s) | 202 |
| BmsI | GCATC | 3 cut(s) | 412, 509, 1034 |
| BmtI | GCTAGC | 1 cut(s) | 771 |
| BpiI | GAAGAC | 1 cut(s) | 720 |
| BpuMI | CCSGG | 1 cut(s) | 202 |
| BsaAI | YACGTR | 1 cut(s) | 1137 |
| BsaI | GGTCTC | 2 cut(s) | 233, 622 |
| BsaJI | CCNNGG | 3 cut(s) | 201, 446, 976 |
| BsaWI | WCCGGW | 1 cut(s) | 1271 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 83, 86, 113, 116 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 358, 428, 429, 582, 707, 763, 1007 |
| Bse118I | RCCGGY | 1 cut(s) | 932 |
| BseDI | CCNNGG | 3 cut(s) | 201, 446, 976 |
| BseGI | GGATG | 1 cut(s) | 829 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 358, 428, 429, 582, 707, 763, 1007 |
| BseMII | CTCAG | 3 cut(s) | 654, 1067, 1211 |
| BseRI | GAGGAG | 7 cut(s) | 88, 91, 94, 97, 100, 245, 923 |
| BseSI | GKGCMC | 1 cut(s) | 757 |
| BseXI | GCAGC | 9 cut(s) | 209, 231, 916, 1315, 1324, 1327, 1330, 1333, 1336 |
| Bsh1236I | CGCG | 2 cut(s) | 196, 1185 |
| BshFI | GGCC | 1 cut(s) | 273 |
| BsiSI | CCGG | 3 cut(s) | 201, 933, 1272 |
| BslFI | GGGAC | 2 cut(s) | 350, 464 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 358, 428, 429, 582, 707, 763, 1007 |
| BsmAI | GTCTC | 5 cut(s) | 151, 233, 335, 503, 622 |
| BsmBI | CGTCTC | 1 cut(s) | 335 |
| BsmFI | GGGAC | 2 cut(s) | 350, 464 |
| BsmI | GAATGC | 1 cut(s) | 677 |
| BsnI | GGCC | 1 cut(s) | 273 |
| Bso31I | GGTCTC | 2 cut(s) | 233, 622 |
| Bsp1286I | GDGCHC | 1 cut(s) | 757 |
| Bsp143I | GATC | 4 cut(s) | 646, 710, 885, 1099 |
| Bsp68I | TCGCGA | 1 cut(s) | 1185 |
| BspACI | CCGC | 5 cut(s) | 58, 183, 186, 196, 981 |
| BspANI | GGCC | 1 cut(s) | 273 |
| BspCNI | CTCAG | 3 cut(s) | 653, 1068, 1210 |
| BspFNI | CGCG | 2 cut(s) | 196, 1185 |
| BspMI | ACCTGC | 2 cut(s) | 683, 1179 |
| BspOI | GCTAGC | 1 cut(s) | 771 |
| BspPI | GGATC | 1 cut(s) | 718 |
| BspQI | GCTCTTC | 1 cut(s) | 184 |
| BspTNI | GGTCTC | 2 cut(s) | 233, 622 |
| BsrBI | CCGCTC | 1 cut(s) | 183 |
| BsrFI | RCCGGY | 1 cut(s) | 932 |
| BssAI | RCCGGY | 1 cut(s) | 932 |
| BssECI | CCNNGG | 3 cut(s) | 201, 446, 976 |
| BssMI | GATC | 4 cut(s) | 646, 710, 885, 1099 |
| BssT1I | CCWWGG | 2 cut(s) | 446, 976 |
| Bst6I | CTCTTC | 5 cut(s) | 184, 255, 315, 338, 864 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 409 |
| BstBAI | YACGTR | 1 cut(s) | 1137 |
| BstC8I | GCNNGC | 5 cut(s) | 275, 419, 769, 934, 1194 |
| BstDEI | CTNAG | 3 cut(s) | 640, 1076, 1197 |
| BstF5I | GGATG | 1 cut(s) | 829 |
| BstFNI | CGCG | 2 cut(s) | 196, 1185 |
| BstHHI | GCGC | 1 cut(s) | 196 |
| BstKTI | GATC | 4 cut(s) | 649, 713, 888, 1102 |
| BstMAI | GTCTC | 5 cut(s) | 151, 233, 335, 503, 622 |
| BstMBI | GATC | 4 cut(s) | 646, 710, 885, 1099 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 173, 409, 418, 1137, 1334, 1337, 1343, 1346, 1349 |
| BstSCI | CCNGG | 1 cut(s) | 200 |
| BstSLI | GKGCMC | 1 cut(s) | 757 |
| BstUI | CGCG | 2 cut(s) | 196, 1185 |
| BstV1I | GCAGC | 9 cut(s) | 209, 231, 916, 1315, 1324, 1327, 1330, 1333, 1336 |
| BstV2I | GAAGAC | 1 cut(s) | 720 |
| BstX2I | RGATCY | 2 cut(s) | 710, 1099 |
| BstYI | RGATCY | 2 cut(s) | 710, 1099 |
| BsuRI | GGCC | 1 cut(s) | 273 |
| BtsCI | GGATG | 1 cut(s) | 829 |
| BtsI | GCAGTG | 1 cut(s) | 174 |
| BtsIMutI | CAGTG | 2 cut(s) | 174, 895 |
| BtuMI | TCGCGA | 1 cut(s) | 1185 |
| BveI | ACCTGC | 2 cut(s) | 683, 1179 |
| Cac8I | GCNNGC | 5 cut(s) | 275, 419, 769, 934, 1194 |
| CfoI | GCGC | 1 cut(s) | 196 |
| Cfr10I | RCCGGY | 1 cut(s) | 932 |
| Cfr13I | GGNCC | 4 cut(s) | 198, 271, 585, 698 |
| CpoI | CGGWCCG | 1 cut(s) | 198 |
| CseI | GACGC | 1 cut(s) | 818 |
| CspI | CGGWCCG | 1 cut(s) | 198 |
| CviAII | CATG | 6 cut(s) | 177, 338, 428, 820, 1322, 1357 |
| DdeI | CTNAG | 3 cut(s) | 640, 1076, 1197 |
| DpnI | GATC | 4 cut(s) | 648, 712, 887, 1101 |
| DpnII | GATC | 4 cut(s) | 646, 710, 885, 1099 |
| Eam1104I | CTCTTC | 5 cut(s) | 184, 255, 315, 338, 864 |
| EarI | CTCTTC | 5 cut(s) | 184, 255, 315, 338, 864 |
| EciI | GGCGGA | 1 cut(s) | 201 |
| Eco130I | CCWWGG | 2 cut(s) | 446, 976 |
| Eco31I | GGTCTC | 2 cut(s) | 233, 622 |
| Eco32I | GATATC | 1 cut(s) | 859 |
| Eco47I | GGWCC | 3 cut(s) | 198, 585, 698 |
| Eco57I | CTGAAG | 2 cut(s) | 714, 1353 |
| Eco72I | CACGTG | 1 cut(s) | 1137 |
| EcoO109I | RGGNCCY | 1 cut(s) | 271 |
| EcoRV | GATATC | 1 cut(s) | 859 |
| EcoT14I | CCWWGG | 2 cut(s) | 446, 976 |
| EcoT22I | ATGCAT | 1 cut(s) | 677 |
| ErhI | CCWWGG | 2 cut(s) | 446, 976 |
| Esp3I | CGTCTC | 1 cut(s) | 335 |
| FaeI | CATG | 6 cut(s) | 180, 341, 431, 823, 1325, 1360 |
| FaqI | GGGAC | 2 cut(s) | 350, 464 |
| FatI | CATG | 6 cut(s) | 176, 337, 427, 819, 1321, 1356 |
| FbaI | TGATCA | 1 cut(s) | 885 |
| FokI | GGATG | 1 cut(s) | 836 |
| FspBI | CTAG | 3 cut(s) | 768, 1208, 1235 |
| GlaI | GCGC | 1 cut(s) | 195 |
| HaeIII | GGCC | 1 cut(s) | 273 |
| HapII | CCGG | 3 cut(s) | 201, 933, 1272 |
| HgaI | GACGC | 1 cut(s) | 818 |
| HhaI | GCGC | 1 cut(s) | 196 |
| Hin1II | CATG | 6 cut(s) | 180, 341, 431, 823, 1325, 1360 |
| Hin6I | GCGC | 1 cut(s) | 194 |
| HinP1I | GCGC | 1 cut(s) | 194 |
| HincII | GTYRAC | 1 cut(s) | 1041 |
| HindII | GTYRAC | 1 cut(s) | 1041 |
| HindIII | AAGCTT | 1 cut(s) | 1155 |
| HinfI | GANTC | 8 cut(s) | 35, 124, 323, 452, 511, 950, 1144, 1201 |
| HpaII | CCGG | 3 cut(s) | 201, 933, 1272 |
| HphI | GGTGA | 4 cut(s) | 277, 363, 1098, 1160 |
| Hpy166II | GTNNAC | 4 cut(s) | 285, 585, 698, 1041 |
| Hpy188I | TCNGA | 7 cut(s) | 34, 123, 135, 622, 1077, 1200, 1292 |
| Hpy188III | TCNNGA | 6 cut(s) | 293, 470, 508, 905, 1004, 1184 |
| Hpy8I | GTNNAC | 4 cut(s) | 285, 585, 698, 1041 |
| HpyAV | CCTTC | 6 cut(s) | 166, 255, 308, 315, 476, 525 |
| HpyCH4IV | ACGT | 4 cut(s) | 742, 956, 995, 1136 |
| HpyCH4V | TGCA | 8 cut(s) | 83, 403, 441, 675, 919, 989, 1118, 1140 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 173, 409, 418, 1137, 1334, 1337, 1343, 1346, 1349 |
| HpyF3I | CTNAG | 3 cut(s) | 640, 1076, 1197 |
| HpySE526I | ACGT | 4 cut(s) | 742, 956, 995, 1136 |
| Hsp92II | CATG | 6 cut(s) | 180, 341, 431, 823, 1325, 1360 |
| HspAI | GCGC | 1 cut(s) | 194 |
| KroI | GCCGGC | 1 cut(s) | 932 |
| KroNI | GCCGGC | 1 cut(s) | 934 |
| Ksp22I | TGATCA | 1 cut(s) | 885 |
| Kzo9I | GATC | 4 cut(s) | 646, 710, 885, 1099 |
| LguI | GCTCTTC | 1 cut(s) | 184 |
| LmnI | GCTCC | 3 cut(s) | 180, 350, 497 |
| Lsp1109I | GCAGC | 9 cut(s) | 209, 231, 916, 1315, 1324, 1327, 1330, 1333, 1336 |
| LweI | GCATC | 3 cut(s) | 412, 509, 1034 |
| MaeI | CTAG | 3 cut(s) | 768, 1208, 1235 |
| MaeII | ACGT | 4 cut(s) | 742, 956, 995, 1136 |
| MaeIII | GTNAC | 6 cut(s) | 3, 485, 850, 1055, 1104, 1124 |
| MalI | GATC | 4 cut(s) | 648, 712, 887, 1101 |
| MbiI | CCGCTC | 1 cut(s) | 183 |
| MboI | GATC | 4 cut(s) | 646, 710, 885, 1099 |
| MboII | GAAGA | 8 cut(s) | 31, 201, 242, 293, 302, 325, 720, 881 |
| MflI | RGATCY | 2 cut(s) | 710, 1099 |
| MhlI | GDGCHC | 1 cut(s) | 757 |
| MluCI | AATT | 7 cut(s) | 24, 161, 381, 491, 1120, 1276, 1298 |
| MlyI | GAGTC | 5 cut(s) | 29, 118, 446, 505, 1195 |
| MmeI | TCCRAC | 2 cut(s) | 12, 146 |
| Mph1103I | ATGCAT | 1 cut(s) | 677 |
| MroNI | GCCGGC | 1 cut(s) | 932 |
| MseI | TTAA | 3 cut(s) | 843, 1071, 1266 |
| MspA1I | CMGCKG | 1 cut(s) | 222 |
| MspI | CCGG | 3 cut(s) | 201, 933, 1272 |
| MspR9I | CCNGG | 1 cut(s) | 202 |
| Mva1269I | GAATGC | 1 cut(s) | 677 |
| MvnI | CGCG | 2 cut(s) | 196, 1185 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 173, 409, 418, 1137, 1334, 1337, 1343, 1346, 1349 |
| NaeI | GCCGGC | 1 cut(s) | 934 |
| NciI | CCSGG | 1 cut(s) | 202 |
| NdeII | GATC | 4 cut(s) | 646, 710, 885, 1099 |
| NgoMIV | GCCGGC | 1 cut(s) | 932 |
| NheI | GCTAGC | 1 cut(s) | 767 |
| NlaIII | CATG | 6 cut(s) | 180, 341, 431, 823, 1325, 1360 |
| NmeAIII | GCCGAG | 1 cut(s) | 393 |
| NmuCI | GTSAC | 2 cut(s) | 1055, 1104 |
| NruI | TCGCGA | 1 cut(s) | 1185 |
| NsiI | ATGCAT | 1 cut(s) | 677 |
| PaqCI | CACCTGC | 2 cut(s) | 683, 1179 |
| PciSI | GCTCTTC | 1 cut(s) | 184 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 420 |
| PctI | GAATGC | 1 cut(s) | 677 |
| PdiI | GCCGGC | 1 cut(s) | 934 |
| PfeI | GAWTC | 3 cut(s) | 323, 950, 1144 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 358, 582, 763 |
| PleI | GAGTC | 5 cut(s) | 29, 118, 446, 505, 1195 |
| PmaCI | CACGTG | 1 cut(s) | 1137 |
| PmlI | CACGTG | 1 cut(s) | 1137 |
| PpsI | GAGTC | 5 cut(s) | 29, 118, 446, 505, 1195 |
| Ppu21I | YACGTR | 1 cut(s) | 1137 |
| PshBI | ATTAAT | 1 cut(s) | 1071 |
| PspCI | CACGTG | 1 cut(s) | 1137 |
| PspPI | GGNCC | 4 cut(s) | 198, 271, 585, 698 |
| PsuI | RGATCY | 2 cut(s) | 710, 1099 |
| PvuII | CAGCTG | 1 cut(s) | 222 |
| RruI | TCGCGA | 1 cut(s) | 1185 |
| Rsr2I | CGGWCCG | 1 cut(s) | 198 |
| RsrII | CGGWCCG | 1 cut(s) | 198 |
| SapI | GCTCTTC | 1 cut(s) | 184 |
| SaqAI | TTAA | 3 cut(s) | 843, 1071, 1266 |
| Sau3AI | GATC | 4 cut(s) | 646, 710, 885, 1099 |
| Sau96I | GGNCC | 4 cut(s) | 198, 271, 585, 698 |
| SchI | GAGTC | 5 cut(s) | 29, 118, 446, 505, 1195 |
| ScrFI | CCNGG | 1 cut(s) | 202 |
| SduI | GDGCHC | 1 cut(s) | 757 |
| SfaNI | GCATC | 3 cut(s) | 412, 509, 1034 |
| SinI | GGWCC | 3 cut(s) | 198, 585, 698 |
| Sse9I | AATT | 7 cut(s) | 24, 161, 381, 491, 1120, 1276, 1298 |
| SsiI | CCGC | 5 cut(s) | 58, 183, 186, 196, 981 |
| SspI | AATATT | 1 cut(s) | 1048 |
| SspMI | CTAG | 3 cut(s) | 768, 1208, 1235 |
| StyD4I | CCNGG | 1 cut(s) | 200 |
| StyI | CCWWGG | 2 cut(s) | 446, 976 |
| TaiI | ACGT | 4 cut(s) | 745, 959, 998, 1139 |
| TaqI | TCGA | 4 cut(s) | 153, 507, 552, 649 |
| TasI | AATT | 7 cut(s) | 24, 161, 381, 491, 1120, 1276, 1298 |
| TauI | GCSGC | 3 cut(s) | 60, 186, 984 |
| TfiI | GAWTC | 3 cut(s) | 323, 950, 1144 |
| Tru1I | TTAA | 3 cut(s) | 843, 1071, 1266 |
| Tru9I | TTAA | 3 cut(s) | 843, 1071, 1266 |
| TscAI | CASTG | 2 cut(s) | 174, 895 |
| TseFI | GTSAC | 2 cut(s) | 1055, 1104 |
| TseI | GCWGC | 9 cut(s) | 219, 222, 929, 1328, 1337, 1340, 1343, 1346, 1349 |
| Tsp45I | GTSAC | 2 cut(s) | 1055, 1104 |
| TspDTI | ATGAA | 7 cut(s) | 173, 548, 615, 684, 753, 1034, 1345 |
| TspGWI | ACGGA | 1 cut(s) | 1235 |
| TspRI | CASTG | 2 cut(s) | 174, 895 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 358, 582, 763 |
| VpaK11BI | GGWCC | 3 cut(s) | 198, 585, 698 |
| VspI | ATTAAT | 1 cut(s) | 1071 |
| XapI | RAATTY | 3 cut(s) | 161, 491, 1298 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 974 |
| XspI | CTAG | 3 cut(s) | 768, 1208, 1235 |
| Zsp2I | ATGCAT | 1 cut(s) | 677 |