Non-catalytic subunit of the queuine tRNA- ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, - His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7- deazaguanosine)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g32910 FvH4_5g32910 |
| malus_domestica | MD15G1399400.v1.1 |
| prunus_persica | Prupe.1G546900_v2.0.a1 Prupe.1G546900_v2.0.a1 Prupe.1G546900_v2.0.a1 Prupe.1G546900_v2.0.a1 |
| pyrus_communis | pycom15g35840 |
| rosa_chinensis | RchiOBHm_Chr7g0224381 RchiOBHm_Chr7g0230881 |
| rosa_laevigata | RLG00000001455 RLG00000002175 |
| rosa_multiflora | Rmu_sc0000483.1_g000007 Rmu_sc0000551.1_g000016 Rmu_sc0006366.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00238700 |
| rosa_rugosa | Rorug07G0201000 Rorug07G0262800 |
| rosa_samantha | Rh7AG380700 Rh7AG416100 Rh7BG330800 Rh7BG392100 Rh7CG400100 Rh7CG435100 Rh7DG410600 |
| rosa_wichuraiana | Rw7G031120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 272 |
| AfaI | GTAC | 1 cut(s) | 248 |
| AgsI | TTSAA | 2 cut(s) | 19, 158 |
| AjnI | CCWGG | 1 cut(s) | 102 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 186, 218 |
| AluBI | AGCT | 2 cut(s) | 179, 281 |
| AluI | AGCT | 2 cut(s) | 179, 281 |
| Alw26I | GTCTC | 1 cut(s) | 157 |
| AoxI | GGCC | 2 cut(s) | 69, 272 |
| AsuHPI | GGTGA | 1 cut(s) | 92 |
| BalI | TGGCCA | 1 cut(s) | 274 |
| BccI | CCATC | 2 cut(s) | 101, 264 |
| BciT130I | CCWGG | 1 cut(s) | 104 |
| BcoDI | GTCTC | 1 cut(s) | 157 |
| BfaI | CTAG | 2 cut(s) | 33, 230 |
| Bme1390I | CCNGG | 1 cut(s) | 104 |
| BmrFI | CCNGG | 1 cut(s) | 104 |
| BsaJI | CCNNGG | 1 cut(s) | 72 |
| BseBI | CCWGG | 1 cut(s) | 104 |
| BseDI | CCNNGG | 1 cut(s) | 72 |
| BseGI | GGATG | 2 cut(s) | 112, 178 |
| BshFI | GGCC | 2 cut(s) | 71, 274 |
| BsmAI | GTCTC | 1 cut(s) | 157 |
| BsnI | GGCC | 2 cut(s) | 71, 274 |
| BspANI | GGCC | 2 cut(s) | 71, 274 |
| BssECI | CCNNGG | 1 cut(s) | 72 |
| BssT1I | CCWWGG | 1 cut(s) | 72 |
| Bst2UI | CCWGG | 1 cut(s) | 104 |
| BstF5I | GGATG | 2 cut(s) | 112, 178 |
| BstMAI | GTCTC | 1 cut(s) | 157 |
| BstNI | CCWGG | 1 cut(s) | 104 |
| BstSCI | CCNGG | 1 cut(s) | 102 |
| BsuRI | GGCC | 2 cut(s) | 71, 274 |
| BtsCI | GGATG | 2 cut(s) | 112, 178 |
| Csp6I | GTAC | 1 cut(s) | 247 |
| CviAII | CATG | 1 cut(s) | 119 |
| CviJI | RGCY | 5 cut(s) | 32, 71, 179, 274, 281 |
| CviKI_1 | RGCY | 5 cut(s) | 32, 71, 179, 274, 281 |
| CviQI | GTAC | 1 cut(s) | 247 |
| EaeI | YGGCCR | 1 cut(s) | 272 |
| Eco130I | CCWWGG | 1 cut(s) | 72 |
| EcoRII | CCWGG | 1 cut(s) | 102 |
| EcoT14I | CCWWGG | 1 cut(s) | 72 |
| ErhI | CCWWGG | 1 cut(s) | 72 |
| FaeI | CATG | 1 cut(s) | 122 |
| FaiI | YATR | 2 cut(s) | 120, 244 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 150, 182 |
| FatI | CATG | 1 cut(s) | 118 |
| FokI | GGATG | 2 cut(s) | 119, 185 |
| FspBI | CTAG | 2 cut(s) | 33, 230 |
| HaeIII | GGCC | 2 cut(s) | 71, 274 |
| Hin1II | CATG | 1 cut(s) | 122 |
| HinfI | GANTC | 2 cut(s) | 41, 97 |
| HphI | GGTGA | 1 cut(s) | 92 |
| Hpy166II | GTNNAC | 1 cut(s) | 249 |
| Hpy188I | TCNGA | 1 cut(s) | 46 |
| Hpy188III | TCNNGA | 1 cut(s) | 170 |
| Hpy8I | GTNNAC | 1 cut(s) | 249 |
| HpyAV | CCTTC | 1 cut(s) | 152 |
| Hsp92II | CATG | 1 cut(s) | 122 |
| LpnPI | CCDG | 4 cut(s) | 22, 89, 116, 155 |
| MaeI | CTAG | 2 cut(s) | 33, 230 |
| MaeIII | GTNAC | 1 cut(s) | 144 |
| MlsI | TGGCCA | 1 cut(s) | 274 |
| MluNI | TGGCCA | 1 cut(s) | 274 |
| MlyI | GAGTC | 1 cut(s) | 91 |
| MnlI | CCTC | 2 cut(s) | 22, 87 |
| Mox20I | TGGCCA | 1 cut(s) | 274 |
| MscI | TGGCCA | 1 cut(s) | 274 |
| MseI | TTAA | 3 cut(s) | 53, 150, 295 |
| MslI | CAYNNNNRTG | 1 cut(s) | 105 |
| Msp20I | TGGCCA | 1 cut(s) | 274 |
| MspR9I | CCNGG | 1 cut(s) | 104 |
| MvaI | CCWGG | 1 cut(s) | 104 |
| NlaIII | CATG | 1 cut(s) | 122 |
| NmuCI | GTSAC | 1 cut(s) | 144 |
| PfeI | GAWTC | 1 cut(s) | 41 |
| PleI | GAGTC | 1 cut(s) | 91 |
| PpsI | GAGTC | 1 cut(s) | 91 |
| Psp6I | CCWGG | 1 cut(s) | 102 |
| PspGI | CCWGG | 1 cut(s) | 102 |
| RsaI | GTAC | 1 cut(s) | 248 |
| RsaNI | GTAC | 1 cut(s) | 247 |
| RseI | CAYNNNNRTG | 1 cut(s) | 105 |
| SaqAI | TTAA | 3 cut(s) | 53, 150, 295 |
| SchI | GAGTC | 1 cut(s) | 91 |
| ScrFI | CCNGG | 1 cut(s) | 104 |
| SetI | ASST | 3 cut(s) | 181, 283, 292 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 105 |
| SspI | AATATT | 1 cut(s) | 15 |
| SspMI | CTAG | 2 cut(s) | 33, 230 |
| StyD4I | CCNGG | 1 cut(s) | 102 |
| StyI | CCWWGG | 1 cut(s) | 72 |
| TfiI | GAWTC | 1 cut(s) | 41 |
| Tru1I | TTAA | 3 cut(s) | 53, 150, 295 |
| Tru9I | TTAA | 3 cut(s) | 53, 150, 295 |
| TseFI | GTSAC | 1 cut(s) | 144 |
| Tsp45I | GTSAC | 1 cut(s) | 144 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 132 |
| XspI | CTAG | 2 cut(s) | 33, 230 |