Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0004707

Physical Location & Seq

Genomic Coordinates Reverse (-)

38830159 .. 38841853

Gene Structure 11695 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g39110.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGTTCACCTGCTGGTATTTCGAAGGCGAGATCGATCTATTTGAACGTGCTCTTACTGCAGCTGGTTTGCATGTTTCTGAAGGCAATAAACTATGGGAAGCCTATCGGTCATTTGAGCAAGCTATATTTCATACTATTGACGAGAAAGACAATCAGGCAAGAGAAAAGCAAATTCAGCGTGTCCGCTCTTTATTCCACCGTCAGTTGTCAGTCCCCCATGTTAATATGAGGTCAACACTTTTGGATTACAAGGCATGGGAGGTGGAACAAGGAAACATTCTTGATGCTGGCTCCAGTGACCTGGATGGAATTTCATTCCAGGTTGCCTCAGCGTACAAAAAGGCACTGGAAATGTATGATGCTCGCGTTCATCTTGAAGAACAGATTTGTCTGCAGGATATGTCAGACTCAGAAAGACTTCAAAATTTCATGAAGTACTTGAGATTTGAACAGTCTTCTGGAGATCCAGCCCGGGTCCAAACGTTGTATGAACGTGCTATTACGGCCTTTCCTATATCCAGTTATCTCTGGCTTGATTATACTCGTTATTTGGACAAAACATTGAAGGTTGGCAATGTTATAACCAACGTTTATTCCAGGGCTGTAATGAATTGCCCCTGTGTTGGAGAGCTTTGGGTCCGATATATGCTTTCCTTGGAGCGTGGTCATGCTTCTGAGAAAGAGATTGCCTCTGTCTTTGAGAAGTCTCTGCTATGCACTTTAACCCTTGATGAGTACCTAGATTTGTACCTCACCCGCGTAGATGGCTTAAGAAGAAGAATATCATGCGCTGTTGAAGGAGAGCATGGCTTGGAGTATTCATTAATCAGGGAAACCTTTCAGAATGCATCAGATTACTTGTCAGCATACCTGAAGAACACGGATGGCTTGCTACGTTTGCATGCTTATTGGGCCCGTTTAGAGCTAAATCTACATAAGGACCAACTGGCAGCTCGTGGAGTTTGGGAGACTTTACTTAAGCTCTGTGGTTCAATGCTGGAAGCCTGGCAAGGTTATATAGCAATGGAAACTGAATTGGGTCATGTCAATGAAGCTCGGGCCCTATATAGGAGATGTTACAGTAAAAGATTTCCCGGAACTGGTTCAGAGGACATCTGCCACTCGTGGTTACGTTTTGAGAGGGAGTTTGGTTCGTTGGATGATTTTGACCATGCAGTACAGAAGGTCACTCCTCGTCTGGAAGAGCTAGAATTATTCAGGTCACAACAAGAATCCAAATTGATAGAAGAGTCTCCTTTGAAGAAGAATGCTCGTGATAAGAGAAAGCAAGTTTCTGACATACCTAATGAACAGCATCCAGCAAAGAGGCAAAAAGATGCAGCCCAAAAGCCAAAGAAAGCACATGGGAAGGATTCTGAGGTGGTGAACTCAGTTGAACAAACTAACGTGGAAAAGATCAAGGCCACGGGTGACCAACCAGACACAGAAAATGAGCAACAAATGAAGGAGCGTGTTCCAGAGAAAAGAAAAGTATATGCTGACCAGTGTACTGTTTTTGTTTCAAATATTAACCTTAAGGCAAATGATGAACATCTGCGTCAATTCTTCAGTGATGTTGGGGGAGTGGTTGCTGTAAGAATACTACATGACAAGTTCACTGGAAAGTCAAGGGGATTGGCGTATGTGGATTTCTCAGATGATGCCCACCTCGTTGCAGCTGTTGCAAAAAATAAGCAGATGCTCCTTGGGAAGAAGCTGAGCATTGCACGATCAGATCCAAAGCATGGGAAGAAGGAACATGCCAGGGGAGCTGAGTCTAATGATTCTGCTGAGGCCTCCAATGCACCTAGAGCACGTCAAGGACAGCAGTCTACTTATAACCGAGGAAGTGATAATGTACAGCTGAAGGGTAGGAACACATTTGCAACTCCCAGGAATATCCTTGCACTTGGTCGTAGTACAAATAAACCAACTACTGAGAAACAGGATGATGAAAAGCCAAAATCCAATGACGAGTTCAGAAACATGTTCCTCAAAGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lsm_interact RRM_1 Suf

Protein Analysis

668

Amino Acids

76.51

Weight (kDa)

7.04

Isoelectric Point (pI)

39.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004707)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24270 AT4G24270 AT4G24270 AT4G24270
fragaria_vesca	FvH4_5g27610 FvH4_5g27610 FvH4_5g27610 FvH4_5g27610
malus_domestica	MD08G1248800.v1.1 MD15G1443600.v1.1
prunus_persica	Prupe.1G586100_v2.0.a1 Prupe.1G586100_v2.0.a1 Prupe.1G586100_v2.0.a1 Prupe.1G586100_v2.0.a1 Prupe.2G119000_v2.0.a1
pyrus_communis	pycom08g21550 pycom15g39110
rosa_chinensis	RchiOBHm_Chr7g0219031
rosa_laevigata	RLG00000002308 RLG00000014066
rosa_multiflora	Rmu_sc0011122.1_g000003 Rmu_sc0016963.1_g000005
rosa_roxburghii	Rroxscaffold_3G00240230
rosa_rugosa	Rorug07G0180600 Rorug07G0180700 Rorug07G0180800
rosa_samantha	Rh7AG324000 Rh7BG315500 Rh7CG341000 Rh7DG321000
rosa_wichuraiana	Rw7G027440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	581, 1839
AarI	CACCTGC	1 cut(s)	17
Acc36I	ACCTGC	1 cut(s)	17
AccB7I	CCANNNNNTGG	1 cut(s)	1745
AccBSI	CCGCTC	1 cut(s)	186
AccI	GTMKAC	1 cut(s)	1832
AccII	CGCG	2 cut(s)	366, 759
AciI	CCGC	2 cut(s)	184, 757
AclI	AACGTT	2 cut(s)	482, 588
AclWI	GGATC	2 cut(s)	458, 1730
AcsI	RAATTY	3 cut(s)	171, 309, 424
AcuI	CTGAAG	4 cut(s)	99, 893, 1552, 1886
AfaI	GTAC	8 cut(s)	335, 437, 737, 749, 1179, 1510, 1860, 1921
AfiI	CCNNNNNNNGG	4 cut(s)	623, 1068, 1100, 1745
AflII	CTTAAG	3 cut(s)	769, 977, 1535
AflIII	ACRYGT	1 cut(s)	1986
AjiI	CACGTC	1 cut(s)	1817
AjnI	CCWGG	6 cut(s)	300, 318, 596, 1004, 1763, 1892
AjuI	GAANNNNNNNTTGG	2 cut(s)	1961, 1993
Alw21I	GWGCWC	2 cut(s)	52, 1816
Alw26I	GTCTC	3 cut(s)	711, 962, 1257
AlwI	GGATC	2 cut(s)	458, 1730
Ama87I	CYCGRG	2 cut(s)	471, 1056
AoxI	GGCC	5 cut(s)	504, 912, 1059, 1422, 1794
ApaI	GGGCCC	2 cut(s)	916, 1063
ApeKI	GCWGC	4 cut(s)	59, 950, 1340, 1676
ApoI	RAATTY	3 cut(s)	171, 309, 424
AseI	ATTAAT	1 cut(s)	824
Asp700I	GAANNNNTTC	3 cut(s)	417, 837, 1102
AspLEI	GCGC	1 cut(s)	791
AspS9I	GGNCC	7 cut(s)	475, 637, 912, 913, 940, 1059, 1060
AsuC2I	CCSGG	3 cut(s)	472, 473, 1095
AsuHPI	GGTGA	3 cut(s)	745, 1396, 1442
AsuII	TTCGAA	1 cut(s)	21
AvaI	CYCGRG	2 cut(s)	471, 1056
AvaII	GGWCC	3 cut(s)	475, 637, 940
BaeGI	GKGCMC	2 cut(s)	916, 1063
BanII	GRGCYC	2 cut(s)	916, 1063
BauI	CACGAG	3 cut(s)	954, 1123, 1272
BbsI	GAAGAC	1 cut(s)	447
Bbv12I	GWGCWC	2 cut(s)	52, 1816
BbvCI	CCTCAGC	2 cut(s)	328, 1791
BbvI	GCAGC	4 cut(s)	71, 962, 1352, 1688
BccI	CCATC	3 cut(s)	299, 758, 878
BceAI	ACGGC	1 cut(s)	519
BciT130I	CCWGG	6 cut(s)	302, 320, 598, 1006, 1765, 1894
BcnI	CCSGG	3 cut(s)	472, 473, 1095
BcoDI	GTCTC	3 cut(s)	711, 962, 1257
BfaI	CTAG	3 cut(s)	740, 1208, 1809
BfmI	CTRYAG	2 cut(s)	57, 392
BfrI	CTTAAG	3 cut(s)	769, 977, 1535
BfuAI	ACCTGC	1 cut(s)	17
BisI	GCNGC	4 cut(s)	60, 951, 1341, 1677
BlpI	GCTNAGC	1 cut(s)	1718
BlsI	GCNGC	4 cut(s)	61, 952, 1342, 1678
BmcAI	AGTACT	1 cut(s)	437
Bme1390I	CCNGG	9 cut(s)	302, 320, 472, 473, 598, 1006, 1095, 1765, 1894
Bme18I	GGWCC	3 cut(s)	475, 637, 940
BmeT110I	CYCGRG	2 cut(s)	471, 1056
BmgBI	CACGTC	1 cut(s)	1817
BmgT120I	GGNCC	7 cut(s)	475, 637, 912, 913, 940, 1059, 1060
BmiI	GGNNCC	5 cut(s)	292, 476, 638, 914, 1061
BmrFI	CCNGG	9 cut(s)	302, 320, 472, 473, 598, 1006, 1095, 1765, 1894
BmsI	GCATC	7 cut(s)	274, 349, 857, 1324, 1327, 1651, 1689
BoxI	GACNNNNGTC	1 cut(s)	1828
BpiI	GAAGAC	1 cut(s)	447
BplI	GAGNNNNNCTC	2 cut(s)	674, 706
BpmI	CTGGAG	2 cut(s)	277, 480
Bpu10I	CCTNAGC	2 cut(s)	328, 1791
Bpu1102I	GCTNAGC	1 cut(s)	1718
Bpu14I	TTCGAA	1 cut(s)	21
BpuEI	CTTGAG	1 cut(s)	460
BpuMI	CCSGG	3 cut(s)	472, 473, 1095
Bsa29I	ATCGAT	1 cut(s)	33
BsaBI	GATNNNNATC	1 cut(s)	1551
BsaJI	CCNNGG	8 cut(s)	471, 597, 654, 1425, 1705, 1764, 1843, 1892
Bsc4I	CCNNNNNNNGG	4 cut(s)	623, 1068, 1100, 1745
Bse1I	ACTGG	7 cut(s)	294, 351, 519, 951, 1105, 1504, 1624
Bse3DI	GCAATG	3 cut(s)	580, 1029, 1722
Bse8I	GATNNNNATC	1 cut(s)	1551
BseBI	CCWGG	6 cut(s)	302, 320, 598, 1006, 1765, 1894
BseCI	ATCGAT	1 cut(s)	33
BseDI	CCNNGG	8 cut(s)	471, 597, 654, 1425, 1705, 1764, 1843, 1892
BseGI	GGATG	5 cut(s)	310, 889, 1165, 1315, 1954
BseJI	GATNNNNATC	1 cut(s)	1551
BseLI	CCNNNNNNNGG	4 cut(s)	623, 1068, 1100, 1745
BseMI	GCAATG	3 cut(s)	580, 1029, 1722
BseNI	ACTGG	7 cut(s)	294, 351, 519, 951, 1105, 1504, 1624
BseRI	GAGGAG	1 cut(s)	1182
BseSI	GKGCMC	2 cut(s)	916, 1063
BseXI	GCAGC	4 cut(s)	71, 962, 1352, 1688
Bsh1236I	CGCG	2 cut(s)	366, 759
BshFI	GGCC	5 cut(s)	506, 914, 1061, 1424, 1796
BshVI	ATCGAT	1 cut(s)	33
BsiHKAI	GWGCWC	2 cut(s)	52, 1816
BsiHKCI	CYCGRG	2 cut(s)	471, 1056
BsiSI	CCGG	2 cut(s)	472, 1095
BslFI	GGGAC	1 cut(s)	197
BslI	CCNNNNNNNGG	4 cut(s)	623, 1068, 1100, 1745
BsmAI	GTCTC	3 cut(s)	711, 962, 1257
BsmFI	GGGAC	1 cut(s)	197
BsmI	GAATGC	2 cut(s)	850, 1273
BsnI	GGCC	5 cut(s)	506, 914, 1061, 1424, 1796
BsoBI	CYCGRG	2 cut(s)	471, 1056
Bsp119I	TTCGAA	1 cut(s)	21
Bsp120I	GGGCCC	2 cut(s)	912, 1059
Bsp1286I	GDGCHC	4 cut(s)	52, 916, 1063, 1816
Bsp1407I	TGTACA	1 cut(s)	1858
Bsp143I	GATC	6 cut(s)	30, 34, 463, 1416, 1730, 1735
Bsp1720I	GCTNAGC	1 cut(s)	1718
BspACI	CCGC	2 cut(s)	184, 757
BspANI	GGCC	5 cut(s)	506, 914, 1061, 1424, 1796
BspDI	ATCGAT	1 cut(s)	33
BspFNI	CGCG	2 cut(s)	366, 759
BspHI	TCATGA	1 cut(s)	429
BspLI	GGNNCC	5 cut(s)	292, 476, 638, 914, 1061
BspMAI	CTGCAG	2 cut(s)	61, 396
BspMI	ACCTGC	1 cut(s)	17
BspPI	GGATC	2 cut(s)	458, 1730
BspQI	GCTCTTC	1 cut(s)	1197
BspT104I	TTCGAA	1 cut(s)	21
BspTI	CTTAAG	3 cut(s)	769, 977, 1535
BsrBI	CCGCTC	1 cut(s)	186
BsrDI	GCAATG	3 cut(s)	580, 1029, 1722
BsrGI	TGTACA	1 cut(s)	1858
BsrI	ACTGG	7 cut(s)	294, 351, 519, 951, 1105, 1504, 1624
BssECI	CCNNGG	8 cut(s)	471, 597, 654, 1425, 1705, 1764, 1843, 1892
BssMI	GATC	6 cut(s)	30, 34, 463, 1416, 1730, 1735
BssSI	CACGAG	3 cut(s)	954, 1123, 1272
BssT1I	CCWWGG	2 cut(s)	654, 1705
Bst2BI	CACGAG	3 cut(s)	954, 1123, 1272
Bst2UI	CCWGG	6 cut(s)	302, 320, 598, 1006, 1765, 1894
Bst4CI	ACNGT	4 cut(s)	200, 453, 1082, 1513
Bst6I	CTCTTC	2 cut(s)	1197, 1242
BstAFI	CTTAAG	3 cut(s)	769, 977, 1535
BstAPI	GCANNNNNTGC	1 cut(s)	1682
BstAUI	TGTACA	1 cut(s)	1858
BstBI	TTCGAA	1 cut(s)	21
BstC8I	GCNNGC	5 cut(s)	120, 289, 364, 890, 903
BstDSI	CCRYGG	1 cut(s)	1425
BstEII	GGTNACC	1 cut(s)	1430
BstF5I	GGATG	5 cut(s)	310, 889, 1165, 1315, 1954
BstFNI	CGCG	2 cut(s)	366, 759
BstHHI	GCGC	1 cut(s)	791
BstKTI	GATC	6 cut(s)	33, 37, 466, 1419, 1733, 1738
BstMAI	GTCTC	3 cut(s)	711, 962, 1257
BstMBI	GATC	6 cut(s)	30, 34, 463, 1416, 1730, 1735
BstNI	CCWGG	6 cut(s)	302, 320, 598, 1006, 1765, 1894
BstNSI	RCATGY	4 cut(s)	74, 905, 1763, 1990
BstPAI	GACNNNNGTC	1 cut(s)	1828
BstPI	GGTNACC	1 cut(s)	1430
BstSCI	CCNGG	9 cut(s)	300, 318, 470, 471, 596, 1004, 1093, 1763, 1892
BstSFI	CTRYAG	2 cut(s)	57, 392
BstSLI	GKGCMC	2 cut(s)	916, 1063
BstUI	CGCG	2 cut(s)	366, 759
BstV1I	GCAGC	4 cut(s)	71, 962, 1352, 1688
BstV2I	GAAGAC	1 cut(s)	447
BstX2I	RGATCY	2 cut(s)	463, 1735
BstXI	CCANNNNNNTGG	1 cut(s)	301
BstYI	RGATCY	2 cut(s)	463, 1735
Bsu15I	ATCGAT	1 cut(s)	33
BsuRI	GGCC	5 cut(s)	506, 914, 1061, 1424, 1796
BsuTUI	ATCGAT	1 cut(s)	33
BtgI	CCRYGG	1 cut(s)	1425
BtrI	CACGTC	1 cut(s)	1817
BtsCI	GGATG	5 cut(s)	310, 889, 1165, 1315, 1954
BtsIMutI	CAGTG	5 cut(s)	301, 344, 1511, 1576, 1617
BveI	ACCTGC	1 cut(s)	17
Cac8I	GCNNGC	5 cut(s)	120, 289, 364, 890, 903
CciI	TCATGA	1 cut(s)	429
CfoI	GCGC	1 cut(s)	791
Cfr13I	GGNCC	7 cut(s)	475, 637, 912, 913, 940, 1059, 1060
Cfr9I	CCCGGG	1 cut(s)	471
ClaI	ATCGAT	1 cut(s)	33
CseI	GACGC	1 cut(s)	1547
Csp6I	GTAC	8 cut(s)	334, 436, 736, 748, 1178, 1509, 1859, 1920
CviQI	GTAC	8 cut(s)	334, 436, 736, 748, 1178, 1509, 1859, 1920
DpnI	GATC	6 cut(s)	32, 36, 465, 1418, 1732, 1737
DpnII	GATC	6 cut(s)	30, 34, 463, 1416, 1730, 1735
Eam1104I	CTCTTC	2 cut(s)	1197, 1242
EarI	CTCTTC	2 cut(s)	1197, 1242
Eco130I	CCWWGG	2 cut(s)	654, 1705
Eco147I	AGGCCT	1 cut(s)	1796
Eco24I	GRGCYC	2 cut(s)	916, 1063
Eco47I	GGWCC	3 cut(s)	475, 637, 940
Eco57I	CTGAAG	4 cut(s)	99, 893, 1552, 1886
Eco88I	CYCGRG	2 cut(s)	471, 1056
Eco91I	GGTNACC	1 cut(s)	1430
EcoO109I	RGGNCCY	1 cut(s)	1060
EcoO65I	GGTNACC	1 cut(s)	1430
EcoRII	CCWGG	6 cut(s)	300, 318, 596, 1004, 1763, 1892
EcoT14I	CCWWGG	2 cut(s)	654, 1705
EcoT22I	ATGCAT	1 cut(s)	850
EcoT38I	GRGCYC	2 cut(s)	916, 1063
ErhI	CCWWGG	2 cut(s)	654, 1705
FaqI	GGGAC	1 cut(s)	197
FauI	CCCGC	1 cut(s)	764
FblI	GTMKAC	1 cut(s)	1832
Fnu4HI	GCNGC	4 cut(s)	60, 951, 1341, 1677
FokI	GGATG	5 cut(s)	317, 896, 1172, 1302, 1961
FriOI	GRGCYC	2 cut(s)	916, 1063
Fsp4HI	GCNGC	4 cut(s)	60, 951, 1341, 1677
FspBI	CTAG	3 cut(s)	740, 1208, 1809
GlaI	GCGC	1 cut(s)	790
GluI	GCNGC	4 cut(s)	60, 951, 1341, 1677
GsuI	CTGGAG	2 cut(s)	277, 480
HaeIII	GGCC	5 cut(s)	506, 914, 1061, 1424, 1796
HapII	CCGG	2 cut(s)	472, 1095
HgaI	GACGC	1 cut(s)	1547
HhaI	GCGC	1 cut(s)	791
Hin6I	GCGC	1 cut(s)	789
HinP1I	GCGC	1 cut(s)	789
HincII	GTYRAC	1 cut(s)	234
HindII	GTYRAC	1 cut(s)	234
HinfI	GANTC	6 cut(s)	407, 1232, 1250, 1373, 1775, 1784
HpaII	CCGG	2 cut(s)	472, 1095
HphI	GGTGA	3 cut(s)	745, 1396, 1442
Hpy166II	GTNNAC	6 cut(s)	6, 234, 1387, 1509, 1617, 1833
Hpy188III	TCNNGA	7 cut(s)	281, 374, 430, 459, 1199, 1274, 1478
Hpy8I	GTNNAC	6 cut(s)	6, 234, 1387, 1509, 1617, 1833
HpyAV	CCTTC	9 cut(s)	17, 74, 559, 791, 1177, 1363, 1459, 1747, 1861
HpyCH4III	ACNGT	4 cut(s)	200, 453, 1082, 1513
HpyCH4IV	ACGT	8 cut(s)	46, 482, 493, 588, 895, 1132, 1407, 1816
HpySE526I	ACGT	8 cut(s)	46, 482, 493, 588, 895, 1132, 1407, 1816
HspAI	GCGC	1 cut(s)	789
Kzo9I	GATC	6 cut(s)	30, 34, 463, 1416, 1730, 1735
LguI	GCTCTTC	1 cut(s)	1197
LmnI	GCTCC	5 cut(s)	296, 658, 1468, 1707, 1769
Lsp1109I	GCAGC	4 cut(s)	71, 962, 1352, 1688
LweI	GCATC	7 cut(s)	274, 349, 857, 1324, 1327, 1651, 1689
MaeI	CTAG	3 cut(s)	740, 1208, 1809
MaeII	ACGT	8 cut(s)	46, 482, 493, 588, 895, 1132, 1407, 1816
MaeIII	GTNAC	6 cut(s)	296, 1076, 1128, 1186, 1221, 1430
MalI	GATC	6 cut(s)	32, 36, 465, 1418, 1732, 1737
MbiI	CCGCTC	1 cut(s)	186
MboI	GATC	6 cut(s)	30, 34, 463, 1416, 1730, 1735
MflI	RGATCY	2 cut(s)	463, 1735
MhlI	GDGCHC	4 cut(s)	52, 916, 1063, 1816
MluCI	AATT	8 cut(s)	171, 309, 424, 610, 1034, 1211, 1238, 1562
MlyI	GAGTC	3 cut(s)	401, 1259, 1784
MmeI	TCCRAC	2 cut(s)	604, 1137
Mph1103I	ATGCAT	1 cut(s)	850
MroXI	GAANNNNTTC	3 cut(s)	417, 837, 1102
MseI	TTAA	7 cut(s)	222, 722, 770, 824, 978, 1530, 1536
MslI	CAYNNNNRTG	1 cut(s)	1047
MspA1I	CMGCKG	3 cut(s)	62, 1679, 1864
MspCI	CTTAAG	3 cut(s)	769, 977, 1535
MspI	CCGG	2 cut(s)	472, 1095
MspR9I	CCNGG	9 cut(s)	302, 320, 472, 473, 598, 1006, 1095, 1765, 1894
Mva1269I	GAATGC	2 cut(s)	850, 1273
MvaI	CCWGG	6 cut(s)	302, 320, 598, 1006, 1765, 1894
MvnI	CGCG	2 cut(s)	366, 759
NciI	CCSGG	3 cut(s)	472, 473, 1095
NdeII	GATC	6 cut(s)	30, 34, 463, 1416, 1730, 1735
NlaIV	GGNNCC	5 cut(s)	292, 476, 638, 914, 1061
NmuCI	GTSAC	4 cut(s)	296, 1186, 1221, 1430
NsiI	ATGCAT	1 cut(s)	850
NspI	RCATGY	4 cut(s)	74, 905, 1763, 1990
NspV	TTCGAA	1 cut(s)	21
PaeI	GCATGC	1 cut(s)	905
PagI	TCATGA	1 cut(s)	429
PaqCI	CACCTGC	1 cut(s)	17
PceI	AGGCCT	1 cut(s)	1796
PciI	ACATGT	1 cut(s)	1986
PciSI	GCTCTTC	1 cut(s)	1197
PctI	GAATGC	2 cut(s)	850, 1273
PdmI	GAANNNNTTC	3 cut(s)	417, 837, 1102
PfeI	GAWTC	3 cut(s)	1232, 1373, 1784
PflMI	CCANNNNNTGG	1 cut(s)	1745
PfoI	TCCNGGA	1 cut(s)	1093
PkrI	GCNGC	4 cut(s)	61, 952, 1342, 1678
PleI	GAGTC	3 cut(s)	401, 1258, 1783
PpsI	GAGTC	3 cut(s)	401, 1258, 1783
PscI	ACATGT	1 cut(s)	1986
PshAI	GACNNNNGTC	1 cut(s)	1828
PshBI	ATTAAT	1 cut(s)	824
PsiI	TTATAA	2 cut(s)	581, 1839
Psp1406I	AACGTT	2 cut(s)	482, 588
Psp6I	CCWGG	6 cut(s)	300, 318, 596, 1004, 1763, 1892
PspEI	GGTNACC	1 cut(s)	1430
PspGI	CCWGG	6 cut(s)	300, 318, 596, 1004, 1763, 1892
PspN4I	GGNNCC	5 cut(s)	292, 476, 638, 914, 1061
PspOMI	GGGCCC	2 cut(s)	912, 1059
PspPI	GGNCC	7 cut(s)	475, 637, 912, 913, 940, 1059, 1060
PstI	CTGCAG	2 cut(s)	61, 396
PsuI	RGATCY	2 cut(s)	463, 1735
PvuII	CAGCTG	3 cut(s)	62, 1679, 1864
RsaI	GTAC	8 cut(s)	335, 437, 737, 749, 1179, 1510, 1860, 1921
RsaNI	GTAC	8 cut(s)	334, 436, 736, 748, 1178, 1509, 1859, 1920
RseI	CAYNNNNRTG	1 cut(s)	1047
SapI	GCTCTTC	1 cut(s)	1197
SaqAI	TTAA	7 cut(s)	222, 722, 770, 824, 978, 1530, 1536
SatI	GCNGC	4 cut(s)	60, 951, 1341, 1677
Sau3AI	GATC	6 cut(s)	30, 34, 463, 1416, 1730, 1735
Sau96I	GGNCC	7 cut(s)	475, 637, 912, 913, 940, 1059, 1060
ScaI	AGTACT	1 cut(s)	437
SchI	GAGTC	3 cut(s)	401, 1259, 1784
ScrFI	CCNGG	9 cut(s)	302, 320, 472, 473, 598, 1006, 1095, 1765, 1894
SduI	GDGCHC	4 cut(s)	52, 916, 1063, 1816
SfaNI	GCATC	7 cut(s)	274, 349, 857, 1324, 1327, 1651, 1689
SfcI	CTRYAG	2 cut(s)	57, 392
SfuI	TTCGAA	1 cut(s)	21
SinI	GGWCC	3 cut(s)	475, 637, 940
SmaI	CCCGGG	1 cut(s)	473
SmiMI	CAYNNNNRTG	1 cut(s)	1047
SmlI	CTYRAG	4 cut(s)	439, 769, 977, 1535
SmoI	CTYRAG	4 cut(s)	439, 769, 977, 1535
SphI	GCATGC	1 cut(s)	905
Sse9I	AATT	8 cut(s)	171, 309, 424, 610, 1034, 1211, 1238, 1562
SseBI	AGGCCT	1 cut(s)	1796
SsiI	CCGC	2 cut(s)	184, 757
SspI	AATATT	1 cut(s)	1528
SspMI	CTAG	3 cut(s)	740, 1208, 1809
StuI	AGGCCT	1 cut(s)	1796
StyD4I	CCNGG	9 cut(s)	300, 318, 470, 471, 596, 1004, 1093, 1763, 1892
StyI	CCWWGG	2 cut(s)	654, 1705
TaaI	ACNGT	4 cut(s)	200, 453, 1082, 1513
TaiI	ACGT	8 cut(s)	49, 485, 496, 591, 898, 1135, 1410, 1819
TaqI	TCGA	2 cut(s)	21, 33
TaqII	GACCGA	1 cut(s)	96
TasI	AATT	8 cut(s)	171, 309, 424, 610, 1034, 1211, 1238, 1562
TatI	WGTACW	5 cut(s)	435, 1177, 1508, 1858, 1919
TfiI	GAWTC	3 cut(s)	1232, 1373, 1784
Tru1I	TTAA	7 cut(s)	222, 722, 770, 824, 978, 1530, 1536
Tru9I	TTAA	7 cut(s)	222, 722, 770, 824, 978, 1530, 1536
TscAI	CASTG	5 cut(s)	301, 351, 1511, 1576, 1624
TseFI	GTSAC	4 cut(s)	296, 1186, 1221, 1430
TseI	GCWGC	4 cut(s)	59, 950, 1340, 1676
Tsp45I	GTSAC	4 cut(s)	296, 1186, 1221, 1430
TspGWI	ACGGA	1 cut(s)	896
TspMI	CCCGGG	1 cut(s)	471
TspRI	CASTG	5 cut(s)	301, 351, 1511, 1576, 1624
Van91I	CCANNNNNTGG	1 cut(s)	1745
Vha464I	CTTAAG	3 cut(s)	769, 977, 1535
VpaK11BI	GGWCC	3 cut(s)	475, 637, 940
VspI	ATTAAT	1 cut(s)	824
XapI	RAATTY	3 cut(s)	171, 309, 424
XceI	RCATGY	4 cut(s)	74, 905, 1763, 1990
XmaI	CCCGGG	1 cut(s)	471
XmiI	GTMKAC	1 cut(s)	1832
XmnI	GAANNNNTTC	3 cut(s)	417, 837, 1102
XspI	CTAG	3 cut(s)	740, 1208, 1809
ZrmI	AGTACT	1 cut(s)	437
Zsp2I	ATGCAT	1 cut(s)	850

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.