Rw7G027440

Squamous cell carcinoma antigen recognized by T-cells

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0004707
Physical Location & Seq
Forward (+)
35464847 .. 35473298
8452 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G027440.1

Sequence Viewer

Length: 2217 bp
ATGGCTGACATTGAAAAGCTGAGGCGAGCGAGGGAAGCTATGAGTATGCTGTTGCCGTTAACCCCCTCCATGTGGCAGGATTGGGCTAAGGACGAACTTGCTATGGGCTCCGGACCCGAGACGTTTTCGACAGTTGAAAAGCTTTATGAGCAAGGAGTCTCTGATTATCTGTCCATCTCTCTCTGGCGAGACTACTTAAATTTTGTTCGAGAAAATGATCCGTCAGTAAAAGAATCTTCACCTGCTGGTATTTCCAAGGAAAGAGATTTATTTGAGCGTGCTCTTACTGCAGCTGGTTTGCATGTATCTGAAGGCAATAAGATATGGGAAGCTTACAGGGAGTTTGAGCAAGCTATATGTGATACTATCGATGGGACTGACACTCAGGCAAGTGAGAAACAAATTCAGCGCATTCGTGTTATATTCCAACGTCAGCTATCAGTTCCTCATGTTAATATGAGATCAACACTTTTGGCTTACAAGGCATGGGAGATGGAACAAGGAACCATTGTTGACACTGGCTGCAGTGATCAGGATGGTATTTCATCTCATGTTGCCGCAGCATACCAAAAGGCATTGGAAATTTATAATGCCCGTGTTCATTTTGAAGAACAAATCAGTCAGCATGATATTCCTGAGATAGAAAGACTTGAAAAGTTCATGAACTACTTGAAATTTGAGCAATCTTCTGGAGATCCTGCCCGTGTTCAAGTGTTGTATGAACGGGCTATTGCTGAGTTTCCTATAGCCAGTCAGCTCTGGCTTGATTATACTTCCTATTTGGACAAAACTTTGAAGGTTGGCAGAATTATAAGCAACGTTTATTCTAGGGCCGTAAAGAATTGCCCCTGGGTTGGAGAACTTTGGGTCAGATATTTGCTTTCCTTGGAGCGTGGCCATGCTTCTGAGAAAGAGATTGCAGCTGTGTTTTGCAAGTCCCAGCAATGCACCTTTTCAACCCTTGATGAGTACGTGGAGTTGTTTCTCACCCGCATAGATGGATTAAGACGAAGACTATCATGCCTCGTTGAAGGAGAGCACGCCTTGGATTATTCATTGTTGAGGGATACATTTCAGTCTGCATCGGATTACCTATCACCACAGATGAAGAACACAGATGTCCTGTTACGTTTGTATGCTTATTGGGCCCGCCTAGAGCTACATCTGGGAAAAGATTTAGTTGCTGCTCGGGGGGTTTGGGAAAGTTTACTGAAGATCAGTGGTACGATGATGGAAGCCTGGCTAGGTTATATAGCAATGGAAATTGAATCGGGCCATGTGAATGAAGCTCGGTCCATATATAGGAGATGCTACAGTAAAAAATTTCCCGGCACTGGTTCAGAGGACATTTGCTACTTGTGGTTGCGCTTTGAGAGGGAGTTTGGGTCGTTGGATGATTTCGACTATGCAGAACGTAAGGTTGCTCACCGTCTGCAAGAGCTTCAACTATTAAGGTCCAAGCAAGAATCCAAATTGACTGAAGAGAGGGAGAATTCTCTCAAAAAGAATGTGCGTGAGAAGAGAAAGCAAGCTTCAGATGTAAGTGATGAACAACCTCCAGCAAAGAGGCAAAAGGATGCAACTCAAAAGCAAAAGAAAGTGCATGGGAAGGATTATGAGGTGCAGAACAAAGCTGAACAAAATGAAGGGAAAGAGATGAAAGCCAAGGGGGCCAAAGATGTACAAAATGAGATGAAAGAGCCTGTTCTAGAGAAAACAAAAGTATACGCTGACCAATGCACTGCTTTTGTATCAAACCTTAGCTTAAAGGCAAATAATGAACATCTTCATCAGTTCTTCAGTGATGTTGGAGGAGTTGTTGCTATTCGAATACTGAAGGACAAGTTCACTGGAAATTCAAGGGGACTAGCATATGTGGACTTCTCAGATGATGCACACCTTGCTGCAGCCATAGCAAAAAATAAACAGACACTCCTAGACAGGAAGCTGAGCATTGCGCGATCAAATCCAAAGCGTGGCAAGAAAGAACATGGGCACACTGATCAAACTGGTGCAGCCAGTGGATCTGGTGAGACCTCCAATGAACCTAGAGCAAGCCAAGGAAGCGACAGCGCGATTAAGAGGAAGAACACATTTGCGGTTCCGAGGAATGTTGCTGCACTTGGTTGGATCACGAATAAGCCAAAAACTCAGGATCCAGATGATGAAAAGCCAAAATCTAATGATGAGTTCAGAAACATGTTCCTGAAAGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lsm_interact RRM_1 Suf

Protein Analysis

738

Amino Acids

84.23

Weight (kDa)

6.64

Isoelectric Point (pI)

36.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Suf PF05843 3 - 486 1.8e-29 Suppressor of forked protein (Suf)
HAT_PRP39_N PF23240 3 - 159 6.4e-13 PRP39 N-terminal HAT repeat
HAT_PRP39_C PF23241 198 - 280 8.9e-12 PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N PF23233 200 - 296 2.2e-07 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_N PF23240 221 - 328 7e-07 PRP39 N-terminal HAT repeat
RRM_1 PF00076 583 - 650 3.5e-14 RNA recognition motif
Lsm_interact PF05391 720 - 737 1.5e-07 Lsm interaction motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 588, 812
AarI CACCTGC 1 cut(s) 250
Acc36I ACCTGC 1 cut(s) 250
AccB7I CCANNNNNTGG 1 cut(s) 1976
AccI GTMKAC 1 cut(s) 1725
AccII CGCG 2 cut(s) 1960, 2075
AccIII TCCGGA 1 cut(s) 110
AciI CCGC 4 cut(s) 558, 991, 1150, 2099
AclI AACGTT 1 cut(s) 819
AclWI GGATC 6 cut(s) 212, 689, 2032, 2138, 2150, 2163
AcoI YGGCCR 1 cut(s) 895
AcsI RAATTY 7 cut(s) 199, 402, 582, 674, 1322, 1492, 1855
AcuI CTGAAG 6 cut(s) 330, 1232, 1500, 1518, 1783, 1856
AfaI GTAC 3 cut(s) 971, 1225, 1683
AfiI CCNNNNNNNGG 5 cut(s) 72, 854, 1302, 1334, 1976
AflIII ACRYGT 1 cut(s) 2199
AjnI CCWGG 2 cut(s) 848, 1238
Alw21I GWGCWC 2 cut(s) 283, 1041
Alw26I GTCTC 4 cut(s) 113, 163, 183, 2027
AlwI GGATC 6 cut(s) 212, 689, 2032, 2138, 2150, 2163
Ama87I CYCGRG 2 cut(s) 116, 1188
Aor13HI TCCGGA 1 cut(s) 110
AoxI GGCC 5 cut(s) 831, 895, 1146, 1273, 1671
ApaI GGGCCC 1 cut(s) 1150
ApeKI GCWGC 9 cut(s) 290, 522, 560, 920, 1184, 1904, 1907, 2015, 2117
ApoI RAATTY 7 cut(s) 199, 402, 582, 674, 1322, 1492, 1855
Asp700I GAANNNNTTC 1 cut(s) 1785
AspLEI GCGC 4 cut(s) 411, 1368, 1960, 2075
AspS9I GGNCC 8 cut(s) 113, 831, 1146, 1147, 1273, 1293, 1455, 1671
AsuC2I CCSGG 1 cut(s) 1329
AsuHPI GGTGA 5 cut(s) 231, 979, 1089, 1418, 2042
AsuII TTCGAA 1 cut(s) 1828
AvaI CYCGRG 2 cut(s) 116, 1188
AvaII GGWCC 3 cut(s) 113, 1293, 1455
BaeGI GKGCMC 2 cut(s) 1150, 1998
BalI TGGCCA 1 cut(s) 897
BamHI GGATCC 1 cut(s) 2155
BanII GRGCYC 2 cut(s) 110, 1150
BbsI GAAGAC 1 cut(s) 1018
Bbv12I GWGCWC 2 cut(s) 283, 1041
BbvCI CCTCAGC 1 cut(s) 20
BbvI GCAGC 9 cut(s) 302, 509, 572, 932, 1171, 1891, 1919, 2027, 2104
BccI CCATC 6 cut(s) 182, 365, 487, 530, 992, 1225
BceAI ACGGC 2 cut(s) 40, 818
BciT130I CCWGG 2 cut(s) 850, 1240
BciVI GTATCC 1 cut(s) 1060
BclI TGATCA 2 cut(s) 529, 2002
BcnI CCSGG 1 cut(s) 1329
BcoDI GTCTC 4 cut(s) 113, 163, 183, 2027
BfaI CTAG 7 cut(s) 828, 1154, 1244, 1709, 1868, 1937, 2049
BfmI CTRYAG 5 cut(s) 288, 523, 744, 1312, 1905
BfuAI ACCTGC 1 cut(s) 250
BfuI GTATCC 1 cut(s) 1060
BglI GCCNNNNNGGC 1 cut(s) 1670
BlpI GCTNAGC 1 cut(s) 1949
Bme1390I CCNGG 3 cut(s) 850, 1240, 1329
Bme18I GGWCC 3 cut(s) 113, 1293, 1455
BmeT110I CYCGRG 2 cut(s) 116, 1188
BmgT120I GGNCC 8 cut(s) 113, 831, 1146, 1147, 1273, 1293, 1455, 1671
BmiI GGNNCC 7 cut(s) 109, 115, 505, 1148, 1672, 2103, 2157
BmrFI CCNGG 3 cut(s) 850, 1240, 1329
BmsI GCATC 4 cut(s) 1091, 1298, 1567, 1882
BpiI GAAGAC 1 cut(s) 1018
BpmI CTGGAG 2 cut(s) 711, 1542
Bpu10I CCTNAGC 3 cut(s) 20, 87, 1760
Bpu1102I GCTNAGC 1 cut(s) 1949
Bpu14I TTCGAA 1 cut(s) 1828
BpuMI CCSGG 1 cut(s) 1329
Bsa29I ATCGAT 1 cut(s) 369
BsaAI YACGTR 1 cut(s) 973
BsaI GGTCTC 1 cut(s) 2027
BsaJI CCNNGG 8 cut(s) 255, 848, 849, 885, 1044, 1665, 2059, 2105
BsaWI WCCGGW 1 cut(s) 110
BsaXI ACNNNNNCTCC 6 cut(s) 1370, 1400, 1803, 1833, 1917, 1947
Bsc4I CCNNNNNNNGG 5 cut(s) 72, 854, 1302, 1334, 1976
Bse1I ACTGG 6 cut(s) 523, 750, 1339, 1855, 2014, 2019
Bse3DI GCAATG 3 cut(s) 950, 1263, 1953
BseAI TCCGGA 1 cut(s) 110
BseBI CCWGG 2 cut(s) 850, 1240
BseCI ATCGAT 1 cut(s) 369
BseDI CCNNGG 8 cut(s) 255, 848, 849, 885, 1044, 1665, 2059, 2105
BseGI GGATG 3 cut(s) 541, 1399, 1582
BseLI CCNNNNNNNGG 5 cut(s) 72, 854, 1302, 1334, 1976
BseMI GCAATG 3 cut(s) 950, 1263, 1953
BseMII CTCAG 8 cut(s) 11, 398, 627, 726, 897, 1899, 1940, 2165
BseNI ACTGG 6 cut(s) 523, 750, 1339, 1855, 2014, 2019
BseRI GAGGAG 1 cut(s) 1827
BseSI GKGCMC 2 cut(s) 1150, 1998
BseXI GCAGC 9 cut(s) 302, 509, 572, 932, 1171, 1891, 1919, 2027, 2104
BseYI CCCAGC 1 cut(s) 939
BsgI GTGCAG 3 cut(s) 1643, 2034, 2103
Bsh1236I CGCG 2 cut(s) 1960, 2075
BshFI GGCC 5 cut(s) 833, 897, 1148, 1275, 1673
BshVI ATCGAT 1 cut(s) 369
BsiHKAI GWGCWC 2 cut(s) 283, 1041
BsiHKCI CYCGRG 2 cut(s) 116, 1188
BsiSI CCGG 2 cut(s) 111, 1329
BslFI GGGAC 3 cut(s) 388, 922, 1878
BslI CCNNNNNNNGG 5 cut(s) 72, 854, 1302, 1334, 1976
BsmAI GTCTC 4 cut(s) 113, 163, 183, 2027
BsmBI CGTCTC 1 cut(s) 113
BsmFI GGGAC 3 cut(s) 388, 922, 1878
BsmI GAATGC 1 cut(s) 411
BsnI GGCC 5 cut(s) 833, 897, 1148, 1275, 1673
Bso31I GGTCTC 1 cut(s) 2027
BsoBI CYCGRG 2 cut(s) 116, 1188
Bsp119I TTCGAA 1 cut(s) 1828
Bsp120I GGGCCC 1 cut(s) 1146
Bsp1286I GDGCHC 5 cut(s) 110, 283, 1041, 1150, 1998
Bsp13I TCCGGA 1 cut(s) 110
Bsp1407I TGTACA 1 cut(s) 1681
Bsp1720I GCTNAGC 1 cut(s) 1949
BspACI CCGC 4 cut(s) 558, 991, 1150, 2099
BspANI GGCC 5 cut(s) 833, 897, 1148, 1275, 1673
BspCNI CTCAG 8 cut(s) 12, 397, 628, 727, 898, 1898, 1941, 2164
BspDI ATCGAT 1 cut(s) 369
BspEI TCCGGA 1 cut(s) 110
BspFNI CGCG 2 cut(s) 1960, 2075
BspHI TCATGA 1 cut(s) 660
BspLI GGNNCC 7 cut(s) 109, 115, 505, 1148, 1672, 2103, 2157
BspMAI CTGCAG 3 cut(s) 292, 527, 1909
BspMI ACCTGC 1 cut(s) 250
BspPI GGATC 6 cut(s) 212, 689, 2032, 2138, 2150, 2163
BspT104I TTCGAA 1 cut(s) 1828
BspTNI GGTCTC 1 cut(s) 2027
BsrDI GCAATG 3 cut(s) 950, 1263, 1953
BsrGI TGTACA 1 cut(s) 1681
BsrI ACTGG 6 cut(s) 523, 750, 1339, 1855, 2014, 2019
BssECI CCNNGG 8 cut(s) 255, 848, 849, 885, 1044, 1665, 2059, 2105
BssNAI GTATAC 1 cut(s) 1726
BssT1I CCWWGG 5 cut(s) 255, 885, 1044, 1665, 2059
Bst1107I GTATAC 1 cut(s) 1726
Bst2UI CCWGG 2 cut(s) 850, 1240
Bst4CI ACNGT 3 cut(s) 133, 1316, 1430
Bst6I CTCTTC 2 cut(s) 1476, 1514
BstAPI GCANNNNNTGC 1 cut(s) 1901
BstAUI TGTACA 1 cut(s) 1681
BstBAI YACGTR 1 cut(s) 973
BstBI TTCGAA 1 cut(s) 1828
BstC8I GCNNGC 7 cut(s) 27, 279, 351, 1041, 1150, 1530, 2056
BstF5I GGATG 3 cut(s) 541, 1399, 1582
BstFNI CGCG 2 cut(s) 1960, 2075
BstHHI GCGC 4 cut(s) 411, 1368, 1960, 2075
BstMAI GTCTC 4 cut(s) 113, 163, 183, 2027
BstMWI GCNNNNNNNGC 9 cut(s) 35, 148, 287, 482, 1145, 1670, 1901, 1913, 2064
BstNI CCWGG 2 cut(s) 850, 1240
BstNSI RCATGY 2 cut(s) 305, 2203
BstSCI CCNGG 3 cut(s) 848, 1238, 1327
BstSFI CTRYAG 5 cut(s) 288, 523, 744, 1312, 1905
BstSLI GKGCMC 2 cut(s) 1150, 1998
BstUI CGCG 2 cut(s) 1960, 2075
BstV1I GCAGC 9 cut(s) 302, 509, 572, 932, 1171, 1891, 1919, 2027, 2104
BstV2I GAAGAC 1 cut(s) 1018
BstX2I RGATCY 3 cut(s) 694, 2024, 2155
BstYI RGATCY 3 cut(s) 694, 2024, 2155
BstZ17I GTATAC 1 cut(s) 1726
Bsu15I ATCGAT 1 cut(s) 369
BsuI GTATCC 1 cut(s) 1060
BsuRI GGCC 5 cut(s) 833, 897, 1148, 1275, 1673
BsuTUI ATCGAT 1 cut(s) 369
BtsCI GGATG 3 cut(s) 541, 1399, 1582
BtsI GCAGTG 2 cut(s) 532, 1740
BtsIMutI CAGTG 9 cut(s) 516, 532, 1225, 1332, 1740, 1807, 1848, 1998, 2026
BveI ACCTGC 1 cut(s) 250
Cac8I GCNNGC 7 cut(s) 27, 279, 351, 1041, 1150, 1530, 2056
CciI TCATGA 1 cut(s) 660
CfoI GCGC 4 cut(s) 411, 1368, 1960, 2075
Cfr13I GGNCC 8 cut(s) 113, 831, 1146, 1147, 1273, 1293, 1455, 1671
ClaI ATCGAT 1 cut(s) 369
Csp6I GTAC 3 cut(s) 970, 1224, 1682
CviQI GTAC 3 cut(s) 970, 1224, 1682
EaeI YGGCCR 1 cut(s) 895
Eam1104I CTCTTC 2 cut(s) 1476, 1514
EarI CTCTTC 2 cut(s) 1476, 1514
Eco130I CCWWGG 5 cut(s) 255, 885, 1044, 1665, 2059
Eco24I GRGCYC 2 cut(s) 110, 1150
Eco31I GGTCTC 1 cut(s) 2027
Eco47I GGWCC 3 cut(s) 113, 1293, 1455
Eco57I CTGAAG 6 cut(s) 330, 1232, 1500, 1518, 1783, 1856
Eco88I CYCGRG 2 cut(s) 116, 1188
EcoRI GAATTC 1 cut(s) 1492
EcoRII CCWGG 2 cut(s) 848, 1238
EcoT14I CCWWGG 5 cut(s) 255, 885, 1044, 1665, 2059
EcoT38I GRGCYC 2 cut(s) 110, 1150
ErhI CCWWGG 5 cut(s) 255, 885, 1044, 1665, 2059
Esp3I CGTCTC 1 cut(s) 113
FaqI GGGAC 3 cut(s) 388, 922, 1878
FauI CCCGC 2 cut(s) 998, 1157
FauNDI CATATG 1 cut(s) 1873
FbaI TGATCA 2 cut(s) 529, 2002
FblI GTMKAC 1 cut(s) 1725
FokI GGATG 3 cut(s) 548, 1406, 1589
FriOI GRGCYC 2 cut(s) 110, 1150
FspBI CTAG 7 cut(s) 828, 1154, 1244, 1709, 1868, 1937, 2049
GlaI GCGC 4 cut(s) 410, 1367, 1959, 2074
GsaI CCCAGC 1 cut(s) 943
GsuI CTGGAG 2 cut(s) 711, 1542
HaeIII GGCC 5 cut(s) 833, 897, 1148, 1275, 1673
HapII CCGG 2 cut(s) 111, 1329
HhaI GCGC 4 cut(s) 411, 1368, 1960, 2075
Hin6I GCGC 4 cut(s) 409, 1366, 1958, 2073
HinP1I GCGC 4 cut(s) 409, 1366, 1958, 2073
HincII GTYRAC 2 cut(s) 60, 514
HindII GTYRAC 2 cut(s) 60, 514
HindIII AAGCTT 3 cut(s) 140, 330, 1530
HinfI GANTC 4 cut(s) 156, 233, 1268, 1466
HpaI GTTAAC 1 cut(s) 60
HpaII CCGG 2 cut(s) 111, 1329
HphI GGTGA 5 cut(s) 231, 979, 1089, 1418, 2042
Hpy166II GTNNAC 6 cut(s) 60, 514, 1208, 1726, 1848, 1879
Hpy8I GTNNAC 6 cut(s) 60, 514, 1208, 1726, 1848, 1879
HpyAV CCTTC 6 cut(s) 305, 790, 1025, 1603, 1640, 1831
HpyCH4III ACNGT 3 cut(s) 133, 1316, 1430
HpyCH4IV ACGT 6 cut(s) 122, 430, 819, 972, 1129, 1414
HpyF10VI GCNNNNNNNGC 9 cut(s) 35, 148, 287, 482, 1145, 1670, 1901, 1913, 2064
HpySE526I ACGT 6 cut(s) 122, 430, 819, 972, 1129, 1414
HspAI GCGC 4 cut(s) 409, 1366, 1958, 2073
Kpn2I TCCGGA 1 cut(s) 110
Ksp22I TGATCA 2 cut(s) 529, 2002
KspAI GTTAAC 1 cut(s) 60
LmnI GCTCC 2 cut(s) 113, 889
Lsp1109I GCAGC 9 cut(s) 302, 509, 572, 932, 1171, 1891, 1919, 2027, 2104
LweI GCATC 4 cut(s) 1091, 1298, 1567, 1882
MaeI CTAG 7 cut(s) 828, 1154, 1244, 1709, 1868, 1937, 2049
MaeII ACGT 6 cut(s) 122, 430, 819, 972, 1129, 1414
MaeIII GTNAC 1 cut(s) 1125
MflI RGATCY 3 cut(s) 694, 2024, 2155
MhlI GDGCHC 5 cut(s) 110, 283, 1041, 1150, 1998
MlsI TGGCCA 1 cut(s) 897
MluNI TGGCCA 1 cut(s) 897
MlyI GAGTC 1 cut(s) 165
MmeI TCCRAC 5 cut(s) 451, 835, 1371, 1789, 2108
Mox20I TGGCCA 1 cut(s) 897
MroI TCCGGA 1 cut(s) 110
MroXI GAANNNNTTC 1 cut(s) 1785
MscI TGGCCA 1 cut(s) 897
MseI TTAA 7 cut(s) 59, 197, 453, 1004, 1451, 1766, 2079
MslI CAYNNNNRTG 1 cut(s) 1281
Msp20I TGGCCA 1 cut(s) 897
MspA1I CMGCKG 2 cut(s) 293, 923
MspI CCGG 2 cut(s) 111, 1329
MspR9I CCNGG 3 cut(s) 850, 1240, 1329
Mva1269I GAATGC 1 cut(s) 411
MvaI CCWGG 2 cut(s) 850, 1240
MvnI CGCG 2 cut(s) 1960, 2075
MwoI GCNNNNNNNGC 9 cut(s) 35, 148, 287, 482, 1145, 1670, 1901, 1913, 2064
NciI CCSGG 1 cut(s) 1329
NdeI CATATG 1 cut(s) 1873
NlaIV GGNNCC 7 cut(s) 109, 115, 505, 1148, 1672, 2103, 2157
NspI RCATGY 2 cut(s) 305, 2203
NspV TTCGAA 1 cut(s) 1828
PagI TCATGA 1 cut(s) 660
PaqCI CACCTGC 1 cut(s) 250
PasI CCCWGGG 1 cut(s) 849
PciI ACATGT 1 cut(s) 2199
PctI GAATGC 1 cut(s) 411
PdmI GAANNNNTTC 1 cut(s) 1785
PfeI GAWTC 3 cut(s) 233, 1268, 1466
PflMI CCANNNNNTGG 1 cut(s) 1976
PleI GAGTC 1 cut(s) 164
PpsI GAGTC 1 cut(s) 164
Ppu21I YACGTR 1 cut(s) 973
PscI ACATGT 1 cut(s) 2199
PsiI TTATAA 2 cut(s) 588, 812
Psp1406I AACGTT 1 cut(s) 819
Psp6I CCWGG 2 cut(s) 848, 1238
PspFI CCCAGC 1 cut(s) 939
PspGI CCWGG 2 cut(s) 848, 1238
PspN4I GGNNCC 7 cut(s) 109, 115, 505, 1148, 1672, 2103, 2157
PspOMI GGGCCC 1 cut(s) 1146
PspPI GGNCC 8 cut(s) 113, 831, 1146, 1147, 1273, 1293, 1455, 1671
PstI CTGCAG 3 cut(s) 292, 527, 1909
PsuI RGATCY 3 cut(s) 694, 2024, 2155
PvuII CAGCTG 2 cut(s) 293, 923
RsaI GTAC 3 cut(s) 971, 1225, 1683
RsaNI GTAC 3 cut(s) 970, 1224, 1682
RseI CAYNNNNRTG 1 cut(s) 1281
SaqAI TTAA 7 cut(s) 59, 197, 453, 1004, 1451, 1766, 2079
Sau96I GGNCC 8 cut(s) 113, 831, 1146, 1147, 1273, 1293, 1455, 1671
SchI GAGTC 1 cut(s) 165
ScrFI CCNGG 3 cut(s) 850, 1240, 1329
SduI GDGCHC 5 cut(s) 110, 283, 1041, 1150, 1998
SfaNI GCATC 4 cut(s) 1091, 1298, 1567, 1882
SfcI CTRYAG 5 cut(s) 288, 523, 744, 1312, 1905
SfuI TTCGAA 1 cut(s) 1828
SinI GGWCC 3 cut(s) 113, 1293, 1455
SmiMI CAYNNNNRTG 1 cut(s) 1281
SsiI CCGC 4 cut(s) 558, 991, 1150, 2099
SspMI CTAG 7 cut(s) 828, 1154, 1244, 1709, 1868, 1937, 2049
StyD4I CCNGG 3 cut(s) 848, 1238, 1327
StyI CCWWGG 5 cut(s) 255, 885, 1044, 1665, 2059
TaaI ACNGT 3 cut(s) 133, 1316, 1430
TaiI ACGT 6 cut(s) 125, 433, 822, 975, 1132, 1417
TaqI TCGA 5 cut(s) 128, 208, 369, 1401, 1828
TaqII GACCGA 1 cut(s) 1281
TatI WGTACW 1 cut(s) 1681
TauI GCSGC 1 cut(s) 560
TfiI GAWTC 3 cut(s) 233, 1268, 1466
Tru1I TTAA 7 cut(s) 59, 197, 453, 1004, 1451, 1766, 2079
Tru9I TTAA 7 cut(s) 59, 197, 453, 1004, 1451, 1766, 2079
TscAI CASTG 9 cut(s) 523, 532, 1225, 1339, 1747, 1807, 1855, 2005, 2026
TseI GCWGC 9 cut(s) 290, 522, 560, 920, 1184, 1904, 1907, 2015, 2117
TspGWI ACGGA 1 cut(s) 210
TspRI CASTG 9 cut(s) 523, 532, 1225, 1339, 1747, 1807, 1855, 2005, 2026
Van91I CCANNNNNTGG 1 cut(s) 1976
VpaK11BI GGWCC 3 cut(s) 113, 1293, 1455
XapI RAATTY 7 cut(s) 199, 402, 582, 674, 1322, 1492, 1855
XbaI TCTAGA 1 cut(s) 1708
XceI RCATGY 2 cut(s) 305, 2203
XmiI GTMKAC 1 cut(s) 1725
XmnI GAANNNNTTC 1 cut(s) 1785
XspI CTAG 7 cut(s) 828, 1154, 1244, 1709, 1868, 1937, 2049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.