Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0004707

Physical Location & Seq

Genomic Coordinates Reverse (-)

15118800 .. 15122742

Gene Structure 3943 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0180700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

ATGGCTGTGATTCCATTTCTTTTTCTTGTTTTCATGCTTAGCTTCTCTCATGGGATTGCTCAGGAAACCGAGCTTTCTCCTGTCCCTACGAAAACGAGCAATTTACAGACATACATTGTCCATGTAATGCAACCAGAGGGTAAAGTTTTTGCCCAAACAGAAGACCTGGCGAGCTGGCACAAATCTTTTCTGCCATCTATGACAGCAAGCTCTGATGAGCAAACACGCCTCCTTTACTCCTACAAAACTGTGATCAGTGGTTTTTCAGCAAGGCTAACTCAAGAGGAAGTGAAAGCGATGGAACAGATGGATGGTTTTGTGGCGGCACATCCTGAACGAGTGTTTCGTCGGAAAACCACACACACTCCCAGCTTCTTGGGGCTGAACCAACAAGCGGGAATTTGGAAAGACTCAAACTTTGGGAAGGGAGTGATCATTGGAGTACTGGATGGTGGAGTATTCCCCAGCCACCCTTCATTTAGTGGTGCAGGAATTCCACCTCCACCTGCTAAATGGAAAGGGAGGTGTGACTTCAATGTGTCAGAATGCAATAATAAATTAATTGGAGCACAGTCGTTCAATCTTGCAGCCATGGCATTGAAGGGAGCGAAAGCTGAACCGCCAACTGATGAAGACGGACATGGAACACACACAGCAAGCACAGCTGGTGGAGCGTTTGTGCAAAACGCTGAAGCGCTAGGAAATGCCAAAGGCACAGCAGTTGGGATGGCACCTTATGCTCACCTGGCAATATACAAAGTCTGTTTTGGAGAACCCTGTCCAGAAAGTGATATCCTAGCTGCCCTTGAAGCTGCTGTTCATGATGGTGTTGATGTGATCTCAATCTCCCTTGGAGAAGATCCAGTTCCATTTTTCCAGGACAGTACTGCAATTGGTTCATTTGCAGCAATGCAAAAGGGAATATTTGTTAGTTGTTCAGCTGGAAATTCTGGTCCATTTAACGGCACATTATCTAATGAAGCCCCTTGGATTCTCACAGTTGGAGCAAGCACCCTTGATAGACGCATTGTAGCCTCAGCCAAGCTTGGAAATGGATTAGTATTTGATGGTGAATCTCTCTTTCAGCCAAAAGATTTCCCTTCAACATTATTGCCTCTTGTTTATGCTGGAGTAAATGGCAAAGCAGAGTCTGCATTTTGCGCTGAAGGATCCTTAAGAAACATCAGTGTGAAAGGTAAGGTGGTTGTGTGTGAGAGAGGTGGGGGAATAGGAAGAATTGACAAGGGAGTGGAAGTGAAAAATGCAGGGGGTGCGGCCATGATTCTACTGAATGCGGAAACTGATGGATTCAGTACCTCAGCTGATGCTCATGTTCTTCCTGCAGCACATGTGACCCATGCAGCTGGACTGAAGATCAAAGCATACATAAATTCGACAGCAACACCAACAGCAACAATCTTATTCAAAGGAACTGTCATCGGAGACTCAACATCTCCAGCTGTTGCTTCCTTCTCTTCAAGAGGCCCCAGCCAGGCAAGTCCAGGAATTCTGAAACCAGACATAATTGGACCAGGTGTAAACATCCTTGCTGCATGGCCATTCCCTCTTGACAACAACACAAAATCAACATCCACTTTTAATATAATTTCCGGAACATCAATGTCATGTCCGCATCTCAGTGGAATTGCAGCTTTGCTCAAGAGCTCTCACCCATACTGGTCACCAGCTGCCATTAAATCTGCTATAATGACTTCTGCTGATCTTCTAAACTTGCAAGGCAAACGGATTTTTGATGAAACACTTCAGACTGCAGATATCTTAGCCACCGGTGCGGGCCATGTCAATCCATCAAAGGCGACCGACCCAGGACTGATATATGATATTCAACCTGATGATTATATTCCATATCTTTGTGGCTTGGGCTACAATGATACTGGAGTCAGTATCCTCGCGCACAGACCAATAAAGTGCTCAAAGGTATCAAGCATCCCTGAAGGAGAGCTGAACTACCCTTCATTTTCTGTCAAGCTGGGACCATCTCAGACATTCACAAGAACTGTGACAAATGTTGGTGCCCCATATTCCACTTATTCGGTCAAGGTATATGCACCACTCGGAACCTATGTGACTATCAAACCCAGCACGCTTTACTTTACAGAGGTGAACCAGAAGGCGTCATATTCAGTGACATTCAGTCGTACTTCAGGAGGTAAAGCTGGTGCATTCACACAGGGATTTATAACATGGGCTTCTACTAAACACGTTGTCCGGAGTCCAGTTTCTGTTTTATTTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lsm_interact RRM_1 Suf

Protein Analysis

752

Amino Acids

79.19

Weight (kDa)

7.01

Isoelectric Point (pI)

34.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	37 - 115	7e-14	Peptidase inhibitor I9
Peptidase_S8	PF00082	141 - 575	3.8e-45	Subtilase family
PA	PF02225	372 - 459	9.4e-13	PA domain
fn3_6	PF17766	654 - 749	4e-28	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004707)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24270 AT4G24270 AT4G24270 AT4G24270
fragaria_vesca	FvH4_5g27610 FvH4_5g27610 FvH4_5g27610 FvH4_5g27610
malus_domestica	MD08G1248800.v1.1 MD15G1443600.v1.1
prunus_persica	Prupe.1G586100_v2.0.a1 Prupe.1G586100_v2.0.a1 Prupe.1G586100_v2.0.a1 Prupe.1G586100_v2.0.a1 Prupe.2G119000_v2.0.a1
pyrus_communis	pycom08g21550 pycom15g39110
rosa_chinensis	RchiOBHm_Chr7g0219031
rosa_laevigata	RLG00000002308 RLG00000014066
rosa_multiflora	Rmu_sc0011122.1_g000003 Rmu_sc0016963.1_g000005
rosa_roxburghii	Rroxscaffold_3G00240230
rosa_rugosa	Rorug07G0180600 Rorug07G0180700 Rorug07G0180800
rosa_samantha	Rh7AG324000 Rh7BG315500 Rh7CG341000 Rh7DG321000
rosa_wichuraiana	Rw7G027440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2201
AarI	CACCTGC	1 cut(s)	514
Acc36I	ACCTGC	1 cut(s)	514
AccB1I	GGYRCC	2 cut(s)	730, 2033
AccII	CGCG	1 cut(s)	1913
AccIII	TCCGGA	2 cut(s)	1610, 2229
AciI	CCGC	7 cut(s)	323, 395, 620, 1274, 1295, 1631, 1793
AclWI	GGATC	3 cut(s)	854, 1164, 1177
AcoI	YGGCCR	2 cut(s)	1275, 1556
AcsI	RAATTY	5 cut(s)	399, 492, 946, 1390, 1506
AcuI	CTGAAG	6 cut(s)	711, 1185, 1391, 1748, 1974, 2148
AcyI	GRCGYC	1 cut(s)	2135
AfaI	GTAC	4 cut(s)	444, 886, 1315, 2161
AfeI	AGCGCT	1 cut(s)	696
AfiI	CCNNNNNNNGG	3 cut(s)	394, 962, 1492
AflII	CTTAAG	1 cut(s)	1174
AflIII	ACRYGT	2 cut(s)	1348, 2221
AgeI	ACCGGT	1 cut(s)	1787
AgsI	TTSAA	8 cut(s)	535, 580, 601, 809, 1104, 1426, 1479, 1847
AhdI	GACNNNNNGTC	1 cut(s)	2154
AjnI	CCWGG	7 cut(s)	165, 744, 876, 1491, 1501, 1531, 1825
Alw21I	GWGCWC	3 cut(s)	571, 1667, 1934
Alw26I	GTCTC	1 cut(s)	1437
AlwI	GGATC	3 cut(s)	854, 1164, 1177
AlwNI	CAGNNNCTG	2 cut(s)	1151, 2243
Aor13HI	TCCGGA	2 cut(s)	1610, 2229
Aor51HI	AGCGCT	1 cut(s)	696
AoxI	GGCC	4 cut(s)	1275, 1483, 1556, 1795
ApeKI	GCWGC	9 cut(s)	587, 800, 812, 905, 1343, 1361, 1550, 1649, 1688
ApoI	RAATTY	5 cut(s)	399, 492, 946, 1390, 1506
ArsI	GACNNNNNNTTYG	4 cut(s)	401, 433, 1419, 1451
AseI	ATTAAT	1 cut(s)	560
AsiGI	ACCGGT	1 cut(s)	1787
Asp700I	GAANNNNTTC	1 cut(s)	1761
AspLEI	GCGC	3 cut(s)	697, 1163, 1915
AspS9I	GGNCC	5 cut(s)	953, 1484, 1529, 1795, 1994
AsuHPI	GGTGA	5 cut(s)	734, 1082, 1661, 1674, 2134
AvaII	GGWCC	3 cut(s)	953, 1529, 1994
BaeGI	GKGCMC	1 cut(s)	2038
BaeI	ACNNNNGTAYC	2 cut(s)	1884, 1917
BalI	TGGCCA	1 cut(s)	1558
BamHI	GGATCC	1 cut(s)	1169
BanI	GGYRCC	2 cut(s)	730, 2033
BanII	GRGCYC	1 cut(s)	1667
BbsI	GAAGAC	2 cut(s)	168, 639
Bbv12I	GWGCWC	3 cut(s)	571, 1667, 1934
BbvCI	CCTCAGC	2 cut(s)	1036, 1318
BbvI	GCAGC	9 cut(s)	599, 787, 799, 917, 1355, 1373, 1537, 1661, 1675
BceAI	ACGGC	1 cut(s)	979
BciT130I	CCWGG	7 cut(s)	167, 746, 878, 1493, 1503, 1533, 1827
BciVI	GTATCC	1 cut(s)	1916
BclI	TGATCA	2 cut(s)	252, 432
BcoDI	GTCTC	1 cut(s)	1437
BfaI	CTAG	2 cut(s)	698, 797
BfmI	CTRYAG	2 cut(s)	1341, 1770
BfoI	RGCGCY	1 cut(s)	698
BfrI	CTTAAG	1 cut(s)	1174
BfuAI	ACCTGC	1 cut(s)	514
BfuI	GTATCC	1 cut(s)	1916
BlpI	GCTNAGC	1 cut(s)	38
BmcAI	AGTACT	2 cut(s)	444, 886
Bme1390I	CCNGG	7 cut(s)	167, 746, 878, 1493, 1503, 1533, 1827
Bme18I	GGWCC	3 cut(s)	953, 1529, 1994
BmeRI	GACNNNNNGTC	1 cut(s)	2154
BmgT120I	GGNCC	5 cut(s)	953, 1484, 1529, 1795, 1994
BmiI	GGNNCC	6 cut(s)	732, 1171, 1486, 1995, 2035, 2080
BmrFI	CCNGG	7 cut(s)	167, 746, 878, 1493, 1503, 1533, 1827
BmsI	GCATC	3 cut(s)	1315, 1642, 1956
BpiI	GAAGAC	2 cut(s)	168, 639
BpmI	CTGGAG	3 cut(s)	1149, 1440, 1917
Bpu10I	CCTNAGC	3 cut(s)	60, 1036, 1318
Bpu1102I	GCTNAGC	1 cut(s)	38
BpuEI	CTTGAG	2 cut(s)	264, 1643
BsaBI	GATNNNNATC	1 cut(s)	842
BsaHI	GRCGYC	1 cut(s)	2135
BsaJI	CCNNGG	4 cut(s)	591, 850, 986, 1825
BsaWI	WCCGGW	3 cut(s)	1610, 1787, 2229
BsaXI	ACNNNNNCTCC	6 cut(s)	349, 379, 663, 693, 1239, 1269
Bsc4I	CCNNNNNNNGG	3 cut(s)	394, 962, 1492
Bse118I	RCCGGY	1 cut(s)	1787
Bse1I	ACTGG	5 cut(s)	450, 863, 1682, 1900, 2237
Bse3DI	GCAATG	1 cut(s)	915
Bse8I	GATNNNNATC	1 cut(s)	842
BseAI	TCCGGA	2 cut(s)	1610, 2229
BseBI	CCWGG	7 cut(s)	167, 746, 878, 1493, 1503, 1533, 1827
BseDI	CCNNGG	4 cut(s)	591, 850, 986, 1825
BseGI	GGATG	7 cut(s)	316, 328, 454, 732, 1542, 1589, 1947
BseJI	GATNNNNATC	1 cut(s)	842
BseLI	CCNNNNNNNGG	3 cut(s)	394, 962, 1492
BseMI	GCAATG	1 cut(s)	915
BseMII	CTCAG	5 cut(s)	74, 1050, 1332, 1651, 2015
BseNI	ACTGG	5 cut(s)	450, 863, 1682, 1900, 2237
BseSI	GKGCMC	1 cut(s)	2038
BseXI	GCAGC	9 cut(s)	599, 787, 799, 917, 1355, 1373, 1537, 1661, 1675
BseYI	CCCAGC	5 cut(s)	368, 464, 1487, 1990, 2099
BsgI	GTGCAG	1 cut(s)	507
Bsh1236I	CGCG	1 cut(s)	1913
Bsh1285I	CGRYCG	1 cut(s)	1821
BshFI	GGCC	4 cut(s)	1277, 1485, 1558, 1797
BshNI	GGYRCC	2 cut(s)	730, 2033
BshTI	ACCGGT	1 cut(s)	1787
BsiEI	CGRYCG	1 cut(s)	1821
BsiHKAI	GWGCWC	3 cut(s)	571, 1667, 1934
BsiSI	CCGG	3 cut(s)	1611, 1788, 2230
BslFI	GGGAC	2 cut(s)	68, 2007
BslI	CCNNNNNNNGG	3 cut(s)	394, 962, 1492
BsmAI	GTCTC	1 cut(s)	1437
BsmFI	GGGAC	2 cut(s)	68, 2007
BsmI	GAATGC	3 cut(s)	551, 1297, 2183
BsnI	GGCC	4 cut(s)	1277, 1485, 1558, 1797
Bsp1286I	GDGCHC	4 cut(s)	571, 1667, 1934, 2038
Bsp13I	TCCGGA	2 cut(s)	1610, 2229
Bsp143I	GATC	7 cut(s)	252, 432, 837, 859, 1169, 1374, 1720
Bsp1720I	GCTNAGC	1 cut(s)	38
Bsp19I	CCATGG	1 cut(s)	591
BspACI	CCGC	7 cut(s)	323, 395, 620, 1274, 1295, 1631, 1793
BspANI	GGCC	4 cut(s)	1277, 1485, 1558, 1797
BspCNI	CTCAG	5 cut(s)	73, 1049, 1331, 1650, 2014
BspEI	TCCGGA	2 cut(s)	1610, 2229
BspFNI	CGCG	1 cut(s)	1913
BspHI	TCATGA	1 cut(s)	820
BspLI	GGNNCC	6 cut(s)	732, 1171, 1486, 1995, 2035, 2080
BspMAI	CTGCAG	2 cut(s)	1345, 1774
BspMI	ACCTGC	1 cut(s)	514
BspPI	GGATC	3 cut(s)	854, 1164, 1177
BspT107I	GGYRCC	2 cut(s)	730, 2033
BspTI	CTTAAG	1 cut(s)	1174
BsrDI	GCAATG	1 cut(s)	915
BsrFI	RCCGGY	1 cut(s)	1787
BsrI	ACTGG	5 cut(s)	450, 863, 1682, 1900, 2237
BssAI	RCCGGY	1 cut(s)	1787
BssECI	CCNNGG	4 cut(s)	591, 850, 986, 1825
BssMI	GATC	7 cut(s)	252, 432, 837, 859, 1169, 1374, 1720
BssNI	GRCGYC	1 cut(s)	2135
BssT1I	CCWWGG	3 cut(s)	591, 850, 986
Bst2UI	CCWGG	7 cut(s)	167, 746, 878, 1493, 1503, 1533, 1827
Bst4CI	ACNGT	6 cut(s)	250, 573, 884, 1000, 1435, 2020
Bst6I	CTCTTC	1 cut(s)	1480
BstACI	GRCGYC	1 cut(s)	2135
BstAFI	CTTAAG	1 cut(s)	1174
BstAPI	GCANNNNNTGC	3 cut(s)	737, 1151, 1271
BstC8I	GCNNGC	7 cut(s)	172, 176, 208, 658, 1009, 1795, 2105
BstDEI	CTNAG	7 cut(s)	38, 60, 1036, 1318, 1637, 1780, 2001
BstDSI	CCRYGG	1 cut(s)	591
BstEII	GGTNACC	1 cut(s)	1680
BstF5I	GGATG	7 cut(s)	316, 328, 454, 732, 1542, 1589, 1947
BstFNI	CGCG	1 cut(s)	1913
BstH2I	RGCGCY	1 cut(s)	698
BstHHI	GCGC	3 cut(s)	697, 1163, 1915
BstKTI	GATC	7 cut(s)	255, 435, 840, 862, 1172, 1377, 1723
BstMAI	GTCTC	1 cut(s)	1437
BstMBI	GATC	7 cut(s)	252, 432, 837, 859, 1169, 1374, 1720
BstMCI	CGRYCG	1 cut(s)	1821
BstNI	CCWGG	7 cut(s)	167, 746, 878, 1493, 1503, 1533, 1827
BstNSI	RCATGY	1 cut(s)	1352
BstPI	GGTNACC	1 cut(s)	1680
BstSCI	CCNGG	7 cut(s)	165, 744, 876, 1491, 1501, 1531, 1825
BstSFI	CTRYAG	2 cut(s)	1341, 1770
BstSLI	GKGCMC	1 cut(s)	2038
BstUI	CGCG	1 cut(s)	1913
BstV1I	GCAGC	9 cut(s)	599, 787, 799, 917, 1355, 1373, 1537, 1661, 1675
BstV2I	GAAGAC	2 cut(s)	168, 639
BstX2I	RGATCY	2 cut(s)	859, 1169
BstXI	CCANNNNNNTGG	2 cut(s)	376, 1364
BstYI	RGATCY	2 cut(s)	859, 1169
BsuI	GTATCC	1 cut(s)	1916
BsuRI	GGCC	4 cut(s)	1277, 1485, 1558, 1797
BtgI	CCRYGG	1 cut(s)	591
BtgZI	GCGATG	1 cut(s)	311
BtsCI	GGATG	7 cut(s)	316, 328, 454, 732, 1542, 1589, 1947
BtsIMutI	CAGTG	4 cut(s)	262, 1192, 1645, 2151
BveI	ACCTGC	1 cut(s)	514
Cac8I	GCNNGC	7 cut(s)	172, 176, 208, 658, 1009, 1795, 2105
CaiI	CAGNNNCTG	2 cut(s)	1151, 2243
CciI	TCATGA	1 cut(s)	820
CfoI	GCGC	3 cut(s)	697, 1163, 1915
Cfr10I	RCCGGY	1 cut(s)	1787
Cfr13I	GGNCC	5 cut(s)	953, 1484, 1529, 1795, 1994
CseI	GACGC	2 cut(s)	1032, 2124
CsiI	ACCWGGT	1 cut(s)	1531
Csp6I	GTAC	4 cut(s)	443, 885, 1314, 2160
CspAI	ACCGGT	1 cut(s)	1787
CviQI	GTAC	4 cut(s)	443, 885, 1314, 2160
DdeI	CTNAG	7 cut(s)	38, 60, 1036, 1318, 1637, 1780, 2001
DpnI	GATC	7 cut(s)	254, 434, 839, 861, 1171, 1376, 1722
DpnII	GATC	7 cut(s)	252, 432, 837, 859, 1169, 1374, 1720
DriI	GACNNNNNGTC	1 cut(s)	2154
EaeI	YGGCCR	2 cut(s)	1275, 1556
Eam1104I	CTCTTC	1 cut(s)	1480
Eam1105I	GACNNNNNGTC	1 cut(s)	2154
EarI	CTCTTC	1 cut(s)	1480
Ecl136II	GAGCTC	1 cut(s)	1665
Eco130I	CCWWGG	3 cut(s)	591, 850, 986
Eco24I	GRGCYC	1 cut(s)	1667
Eco32I	GATATC	2 cut(s)	793, 1777
Eco47I	GGWCC	3 cut(s)	953, 1529, 1994
Eco47III	AGCGCT	1 cut(s)	696
Eco53kI	GAGCTC	1 cut(s)	1665
Eco57I	CTGAAG	6 cut(s)	711, 1185, 1391, 1748, 1974, 2148
Eco91I	GGTNACC	1 cut(s)	1680
EcoICRI	GAGCTC	1 cut(s)	1665
EcoO109I	RGGNCCY	1 cut(s)	1484
EcoO65I	GGTNACC	1 cut(s)	1680
EcoRI	GAATTC	2 cut(s)	492, 1506
EcoRII	CCWGG	7 cut(s)	165, 744, 876, 1491, 1501, 1531, 1825
EcoRV	GATATC	2 cut(s)	793, 1777
EcoT14I	CCWWGG	3 cut(s)	591, 850, 986
EcoT38I	GRGCYC	1 cut(s)	1667
ErhI	CCWWGG	3 cut(s)	591, 850, 986
FaqI	GGGAC	2 cut(s)	68, 2007
FauI	CCCGC	2 cut(s)	388, 1786
FbaI	TGATCA	2 cut(s)	252, 432
FokI	GGATG	7 cut(s)	315, 323, 461, 739, 1529, 1576, 1934
FriOI	GRGCYC	1 cut(s)	1667
FspBI	CTAG	2 cut(s)	698, 797
GlaI	GCGC	3 cut(s)	696, 1162, 1914
GsaI	CCCAGC	5 cut(s)	372, 468, 1491, 1994, 2103
GsuI	CTGGAG	3 cut(s)	1149, 1440, 1917
HaeII	RGCGCY	1 cut(s)	698
HaeIII	GGCC	4 cut(s)	1277, 1485, 1558, 1797
HapII	CCGG	3 cut(s)	1611, 1788, 2230
HgaI	GACGC	2 cut(s)	1032, 2124
HhaI	GCGC	3 cut(s)	697, 1163, 1915
Hin1I	GRCGYC	1 cut(s)	2135
Hin6I	GCGC	3 cut(s)	695, 1161, 1913
HinP1I	GCGC	3 cut(s)	695, 1161, 1913
HindIII	AAGCTT	1 cut(s)	1043
HpaII	CCGG	3 cut(s)	1611, 1788, 2230
HphI	GGTGA	5 cut(s)	734, 1082, 1661, 1674, 2134
Hpy166II	GTNNAC	2 cut(s)	1540, 2125
Hpy188I	TCNGA	8 cut(s)	214, 351, 544, 1442, 1512, 1767, 2004, 2078
Hpy8I	GTNNAC	2 cut(s)	1540, 2125
Hpy99I	CGWCG	1 cut(s)	351
HpyAV	CCTTC	9 cut(s)	418, 483, 595, 1110, 1160, 1480, 1949, 1983, 2125
HpyCH4III	ACNGT	6 cut(s)	250, 573, 884, 1000, 1435, 2020
HpyCH4IV	ACGT	1 cut(s)	2223
HpyF3I	CTNAG	7 cut(s)	38, 60, 1036, 1318, 1637, 1780, 2001
HpySE526I	ACGT	1 cut(s)	2223
Hsp92I	GRCGYC	1 cut(s)	2135
HspAI	GCGC	3 cut(s)	695, 1161, 1913
Kpn2I	TCCGGA	2 cut(s)	1610, 2229
Ksp22I	TGATCA	2 cut(s)	252, 432
Kzo9I	GATC	7 cut(s)	252, 432, 837, 859, 1169, 1374, 1720
LmnI	GCTCC	4 cut(s)	566, 605, 671, 1004
Lsp1109I	GCAGC	9 cut(s)	599, 787, 799, 917, 1355, 1373, 1537, 1661, 1675
LweI	GCATC	3 cut(s)	1315, 1642, 1956
MabI	ACCWGGT	1 cut(s)	1531
MaeI	CTAG	2 cut(s)	698, 797
MaeII	ACGT	1 cut(s)	2223
MaeIII	GTNAC	6 cut(s)	527, 1351, 1680, 2020, 2086, 2146
MalI	GATC	7 cut(s)	254, 434, 839, 861, 1171, 1376, 1722
MboI	GATC	7 cut(s)	252, 432, 837, 859, 1169, 1374, 1720
MboII	GAAGA	8 cut(s)	173, 644, 869, 1245, 1328, 1384, 1467, 1715
MfeI	CAATTG	1 cut(s)	891
MflI	RGATCY	2 cut(s)	859, 1169
MhlI	GDGCHC	4 cut(s)	571, 1667, 1934, 2038
MlsI	TGGCCA	1 cut(s)	1558
MluNI	TGGCCA	1 cut(s)	1558
MlyI	GAGTC	5 cut(s)	404, 1157, 1439, 1908, 2242
MmeI	TCCRAC	2 cut(s)	329, 982
Mox20I	TGGCCA	1 cut(s)	1558
MroI	TCCGGA	2 cut(s)	1610, 2229
MroXI	GAANNNNTTC	1 cut(s)	1761
MscI	TGGCCA	1 cut(s)	1558
MseI	TTAA	5 cut(s)	560, 960, 1175, 1599, 1695
MslI	CAYNNNNRTG	3 cut(s)	825, 1187, 1638
Msp20I	TGGCCA	1 cut(s)	1558
MspA1I	CMGCKG	6 cut(s)	665, 941, 1322, 1364, 1460, 1688
MspCI	CTTAAG	1 cut(s)	1174
MspI	CCGG	3 cut(s)	1611, 1788, 2230
MspR9I	CCNGG	7 cut(s)	167, 746, 878, 1493, 1503, 1533, 1827
MunI	CAATTG	1 cut(s)	891
Mva1269I	GAATGC	3 cut(s)	551, 1297, 2183
MvaI	CCWGG	7 cut(s)	167, 746, 878, 1493, 1503, 1533, 1827
MvnI	CGCG	1 cut(s)	1913
NcoI	CCATGG	1 cut(s)	591
NdeII	GATC	7 cut(s)	252, 432, 837, 859, 1169, 1374, 1720
NlaIV	GGNNCC	6 cut(s)	732, 1171, 1486, 1995, 2035, 2080
NmuCI	GTSAC	6 cut(s)	527, 1351, 1680, 2020, 2086, 2146
NspI	RCATGY	1 cut(s)	1352
PagI	TCATGA	1 cut(s)	820
PaqCI	CACCTGC	1 cut(s)	514
PciI	ACATGT	1 cut(s)	1348
PcsI	WCGNNNNNNNCGW	1 cut(s)	343
PctI	GAATGC	3 cut(s)	551, 1297, 2183
PdmI	GAANNNNTTC	1 cut(s)	1761
PfeI	GAWTC	5 cut(s)	10, 991, 1073, 1282, 1308
PfoI	TCCNGGA	2 cut(s)	876, 1501
PinAI	ACCGGT	1 cut(s)	1787
PleI	GAGTC	5 cut(s)	404, 1156, 1439, 1907, 2241
PpsI	GAGTC	5 cut(s)	404, 1156, 1439, 1907, 2241
PscI	ACATGT	1 cut(s)	1348
PshBI	ATTAAT	1 cut(s)	560
PsiI	TTATAA	1 cut(s)	2201
Psp124BI	GAGCTC	1 cut(s)	1667
Psp6I	CCWGG	7 cut(s)	165, 744, 876, 1491, 1501, 1531, 1825
PspEI	GGTNACC	1 cut(s)	1680
PspFI	CCCAGC	5 cut(s)	368, 464, 1487, 1990, 2099
PspGI	CCWGG	7 cut(s)	165, 744, 876, 1491, 1501, 1531, 1825
PspN4I	GGNNCC	6 cut(s)	732, 1171, 1486, 1995, 2035, 2080
PspPI	GGNCC	5 cut(s)	953, 1484, 1529, 1795, 1994
PstI	CTGCAG	2 cut(s)	1345, 1774
PstNI	CAGNNNCTG	2 cut(s)	1151, 2243
PsuI	RGATCY	2 cut(s)	859, 1169
PvuII	CAGCTG	6 cut(s)	665, 941, 1322, 1364, 1460, 1688
RsaI	GTAC	4 cut(s)	444, 886, 1315, 2161
RsaNI	GTAC	4 cut(s)	443, 885, 1314, 2160
RseI	CAYNNNNRTG	3 cut(s)	825, 1187, 1638
SacI	GAGCTC	1 cut(s)	1667
SaqAI	TTAA	5 cut(s)	560, 960, 1175, 1599, 1695
Sau3AI	GATC	7 cut(s)	252, 432, 837, 859, 1169, 1374, 1720
Sau96I	GGNCC	5 cut(s)	953, 1484, 1529, 1795, 1994
ScaI	AGTACT	2 cut(s)	444, 886
SchI	GAGTC	5 cut(s)	404, 1157, 1439, 1908, 2242
ScrFI	CCNGG	7 cut(s)	167, 746, 878, 1493, 1503, 1533, 1827
SduI	GDGCHC	4 cut(s)	571, 1667, 1934, 2038
SexAI	ACCWGGT	1 cut(s)	1531
SfaNI	GCATC	3 cut(s)	1315, 1642, 1956
SfcI	CTRYAG	2 cut(s)	1341, 1770
SgrAI	CRCCGGYG	1 cut(s)	1787
SinI	GGWCC	3 cut(s)	953, 1529, 1994
SmiMI	CAYNNNNRTG	3 cut(s)	825, 1187, 1638
SmlI	CTYRAG	3 cut(s)	279, 1174, 1658
SmoI	CTYRAG	3 cut(s)	279, 1174, 1658
SsiI	CCGC	7 cut(s)	323, 395, 620, 1274, 1295, 1631, 1793
SspI	AATATT	1 cut(s)	924
SspMI	CTAG	2 cut(s)	698, 797
SstI	GAGCTC	1 cut(s)	1667
StyD4I	CCNGG	7 cut(s)	165, 744, 876, 1491, 1501, 1531, 1825
StyI	CCWWGG	3 cut(s)	591, 850, 986
TaaI	ACNGT	6 cut(s)	250, 573, 884, 1000, 1435, 2020
TaiI	ACGT	1 cut(s)	2226
TaqI	TCGA	1 cut(s)	1394
TaqII	GACCGA	2 cut(s)	1835, 2044
TatI	WGTACW	2 cut(s)	442, 884
TauI	GCSGC	2 cut(s)	326, 1277
TfiI	GAWTC	5 cut(s)	10, 991, 1073, 1282, 1308
Tru1I	TTAA	5 cut(s)	560, 960, 1175, 1599, 1695
Tru9I	TTAA	5 cut(s)	560, 960, 1175, 1599, 1695
TscAI	CASTG	4 cut(s)	262, 1192, 1645, 2151
TseFI	GTSAC	6 cut(s)	527, 1351, 1680, 2020, 2086, 2146
TseI	GCWGC	9 cut(s)	587, 800, 812, 905, 1343, 1361, 1550, 1649, 1688
Tsp45I	GTSAC	6 cut(s)	527, 1351, 1680, 2020, 2086, 2146
TspDTI	ATGAA	8 cut(s)	22, 465, 645, 809, 888, 993, 1770, 1965
TspGWI	ACGGA	2 cut(s)	651, 1759
TspRI	CASTG	4 cut(s)	262, 1192, 1645, 2151
Vha464I	CTTAAG	1 cut(s)	1174
VpaK11BI	GGWCC	3 cut(s)	953, 1529, 1994
VspI	ATTAAT	1 cut(s)	560
XapI	RAATTY	5 cut(s)	399, 492, 946, 1390, 1506
XceI	RCATGY	1 cut(s)	1352
XcmI	CCANNNNNNNNNTGG	1 cut(s)	510
XmnI	GAANNNNTTC	1 cut(s)	1761
XspI	CTAG	2 cut(s)	698, 797
ZrmI	AGTACT	2 cut(s)	444, 886

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.