pycom15g39110

Squamous cell carcinoma antigen recognized by T-cells

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0004707
Physical Location & Seq
Reverse (-)
38830159 .. 38841853
11695 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2004 bp
ATGTTCACCTGCTGGTATTTCGAAGGCGAGATCGATCTATTTGAACGTGCTCTTACTGCAGCTGGTTTGCATGTTTCTGAAGGCAATAAACTATGGGAAGCCTATCGGTCATTTGAGCAAGCTATATTTCATACTATTGACGAGAAAGACAATCAGGCAAGAGAAAAGCAAATTCAGCGTGTCCGCTCTTTATTCCACCGTCAGTTGTCAGTCCCCCATGTTAATATGAGGTCAACACTTTTGGATTACAAGGCATGGGAGGTGGAACAAGGAAACATTCTTGATGCTGGCTCCAGTGACCTGGATGGAATTTCATTCCAGGTTGCCTCAGCGTACAAAAAGGCACTGGAAATGTATGATGCTCGCGTTCATCTTGAAGAACAGATTTGTCTGCAGGATATGTCAGACTCAGAAAGACTTCAAAATTTCATGAAGTACTTGAGATTTGAACAGTCTTCTGGAGATCCAGCCCGGGTCCAAACGTTGTATGAACGTGCTATTACGGCCTTTCCTATATCCAGTTATCTCTGGCTTGATTATACTCGTTATTTGGACAAAACATTGAAGGTTGGCAATGTTATAACCAACGTTTATTCCAGGGCTGTAATGAATTGCCCCTGTGTTGGAGAGCTTTGGGTCCGATATATGCTTTCCTTGGAGCGTGGTCATGCTTCTGAGAAAGAGATTGCCTCTGTCTTTGAGAAGTCTCTGCTATGCACTTTAACCCTTGATGAGTACCTAGATTTGTACCTCACCCGCGTAGATGGCTTAAGAAGAAGAATATCATGCGCTGTTGAAGGAGAGCATGGCTTGGAGTATTCATTAATCAGGGAAACCTTTCAGAATGCATCAGATTACTTGTCAGCATACCTGAAGAACACGGATGGCTTGCTACGTTTGCATGCTTATTGGGCCCGTTTAGAGCTAAATCTACATAAGGACCAACTGGCAGCTCGTGGAGTTTGGGAGACTTTACTTAAGCTCTGTGGTTCAATGCTGGAAGCCTGGCAAGGTTATATAGCAATGGAAACTGAATTGGGTCATGTCAATGAAGCTCGGGCCCTATATAGGAGATGTTACAGTAAAAGATTTCCCGGAACTGGTTCAGAGGACATCTGCCACTCGTGGTTACGTTTTGAGAGGGAGTTTGGTTCGTTGGATGATTTTGACCATGCAGTACAGAAGGTCACTCCTCGTCTGGAAGAGCTAGAATTATTCAGGTCACAACAAGAATCCAAATTGATAGAAGAGTCTCCTTTGAAGAAGAATGCTCGTGATAAGAGAAAGCAAGTTTCTGACATACCTAATGAACAGCATCCAGCAAAGAGGCAAAAAGATGCAGCCCAAAAGCCAAAGAAAGCACATGGGAAGGATTCTGAGGTGGTGAACTCAGTTGAACAAACTAACGTGGAAAAGATCAAGGCCACGGGTGACCAACCAGACACAGAAAATGAGCAACAAATGAAGGAGCGTGTTCCAGAGAAAAGAAAAGTATATGCTGACCAGTGTACTGTTTTTGTTTCAAATATTAACCTTAAGGCAAATGATGAACATCTGCGTCAATTCTTCAGTGATGTTGGGGGAGTGGTTGCTGTAAGAATACTACATGACAAGTTCACTGGAAAGTCAAGGGGATTGGCGTATGTGGATTTCTCAGATGATGCCCACCTCGTTGCAGCTGTTGCAAAAAATAAGCAGATGCTCCTTGGGAAGAAGCTGAGCATTGCACGATCAGATCCAAAGCATGGGAAGAAGGAACATGCCAGGGGAGCTGAGTCTAATGATTCTGCTGAGGCCTCCAATGCACCTAGAGCACGTCAAGGACAGCAGTCTACTTATAACCGAGGAAGTGATAATGTACAGCTGAAGGGTAGGAACACATTTGCAACTCCCAGGAATATCCTTGCACTTGGTCGTAGTACAAATAAACCAACTACTGAGAAACAGGATGATGAAAAGCCAAAATCCAATGACGAGTTCAGAAACATGTTCCTCAAAGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lsm_interact RRM_1 Suf

Protein Analysis

668

Amino Acids

76.51

Weight (kDa)

7.04

Isoelectric Point (pI)

39.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Suf PF05843 14 - 237 9.3e-13 Suppressor of forked protein (Suf)
HAT_PRP39_C PF23241 136 - 203 1.8e-12 PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N PF23233 136 - 235 2.2e-08 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_N PF23240 143 - 237 9.3e-08 PRP39 N-terminal HAT repeat
RRM_1 PF00076 505 - 573 5.9e-14 RNA recognition motif
Lsm_interact PF05391 650 - 666 5.4e-07 Lsm interaction motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 581, 1839
AarI CACCTGC 1 cut(s) 17
Acc36I ACCTGC 1 cut(s) 17
AccB7I CCANNNNNTGG 1 cut(s) 1745
AccBSI CCGCTC 1 cut(s) 186
AccI GTMKAC 1 cut(s) 1832
AccII CGCG 2 cut(s) 366, 759
AciI CCGC 2 cut(s) 184, 757
AclI AACGTT 2 cut(s) 482, 588
AclWI GGATC 2 cut(s) 458, 1730
AcsI RAATTY 3 cut(s) 171, 309, 424
AcuI CTGAAG 4 cut(s) 99, 893, 1552, 1886
AfaI GTAC 8 cut(s) 335, 437, 737, 749, 1179, 1510, 1860, 1921
AfiI CCNNNNNNNGG 4 cut(s) 623, 1068, 1100, 1745
AflII CTTAAG 3 cut(s) 769, 977, 1535
AflIII ACRYGT 1 cut(s) 1986
AjiI CACGTC 1 cut(s) 1817
AjnI CCWGG 6 cut(s) 300, 318, 596, 1004, 1763, 1892
AjuI GAANNNNNNNTTGG 2 cut(s) 1961, 1993
Alw21I GWGCWC 2 cut(s) 52, 1816
Alw26I GTCTC 3 cut(s) 711, 962, 1257
AlwI GGATC 2 cut(s) 458, 1730
Ama87I CYCGRG 2 cut(s) 471, 1056
AoxI GGCC 5 cut(s) 504, 912, 1059, 1422, 1794
ApaI GGGCCC 2 cut(s) 916, 1063
ApeKI GCWGC 4 cut(s) 59, 950, 1340, 1676
ApoI RAATTY 3 cut(s) 171, 309, 424
AseI ATTAAT 1 cut(s) 824
Asp700I GAANNNNTTC 3 cut(s) 417, 837, 1102
AspLEI GCGC 1 cut(s) 791
AspS9I GGNCC 7 cut(s) 475, 637, 912, 913, 940, 1059, 1060
AsuC2I CCSGG 3 cut(s) 472, 473, 1095
AsuHPI GGTGA 3 cut(s) 745, 1396, 1442
AsuII TTCGAA 1 cut(s) 21
AvaI CYCGRG 2 cut(s) 471, 1056
AvaII GGWCC 3 cut(s) 475, 637, 940
BaeGI GKGCMC 2 cut(s) 916, 1063
BanII GRGCYC 2 cut(s) 916, 1063
BauI CACGAG 3 cut(s) 954, 1123, 1272
BbsI GAAGAC 1 cut(s) 447
Bbv12I GWGCWC 2 cut(s) 52, 1816
BbvCI CCTCAGC 2 cut(s) 328, 1791
BbvI GCAGC 4 cut(s) 71, 962, 1352, 1688
BccI CCATC 3 cut(s) 299, 758, 878
BceAI ACGGC 1 cut(s) 519
BciT130I CCWGG 6 cut(s) 302, 320, 598, 1006, 1765, 1894
BcnI CCSGG 3 cut(s) 472, 473, 1095
BcoDI GTCTC 3 cut(s) 711, 962, 1257
BfaI CTAG 3 cut(s) 740, 1208, 1809
BfmI CTRYAG 2 cut(s) 57, 392
BfrI CTTAAG 3 cut(s) 769, 977, 1535
BfuAI ACCTGC 1 cut(s) 17
BisI GCNGC 4 cut(s) 60, 951, 1341, 1677
BlpI GCTNAGC 1 cut(s) 1718
BlsI GCNGC 4 cut(s) 61, 952, 1342, 1678
BmcAI AGTACT 1 cut(s) 437
Bme1390I CCNGG 9 cut(s) 302, 320, 472, 473, 598, 1006, 1095, 1765, 1894
Bme18I GGWCC 3 cut(s) 475, 637, 940
BmeT110I CYCGRG 2 cut(s) 471, 1056
BmgBI CACGTC 1 cut(s) 1817
BmgT120I GGNCC 7 cut(s) 475, 637, 912, 913, 940, 1059, 1060
BmiI GGNNCC 5 cut(s) 292, 476, 638, 914, 1061
BmrFI CCNGG 9 cut(s) 302, 320, 472, 473, 598, 1006, 1095, 1765, 1894
BmsI GCATC 7 cut(s) 274, 349, 857, 1324, 1327, 1651, 1689
BoxI GACNNNNGTC 1 cut(s) 1828
BpiI GAAGAC 1 cut(s) 447
BplI GAGNNNNNCTC 2 cut(s) 674, 706
BpmI CTGGAG 2 cut(s) 277, 480
Bpu10I CCTNAGC 2 cut(s) 328, 1791
Bpu1102I GCTNAGC 1 cut(s) 1718
Bpu14I TTCGAA 1 cut(s) 21
BpuEI CTTGAG 1 cut(s) 460
BpuMI CCSGG 3 cut(s) 472, 473, 1095
Bsa29I ATCGAT 1 cut(s) 33
BsaBI GATNNNNATC 1 cut(s) 1551
BsaJI CCNNGG 8 cut(s) 471, 597, 654, 1425, 1705, 1764, 1843, 1892
Bsc4I CCNNNNNNNGG 4 cut(s) 623, 1068, 1100, 1745
Bse1I ACTGG 7 cut(s) 294, 351, 519, 951, 1105, 1504, 1624
Bse3DI GCAATG 3 cut(s) 580, 1029, 1722
Bse8I GATNNNNATC 1 cut(s) 1551
BseBI CCWGG 6 cut(s) 302, 320, 598, 1006, 1765, 1894
BseCI ATCGAT 1 cut(s) 33
BseDI CCNNGG 8 cut(s) 471, 597, 654, 1425, 1705, 1764, 1843, 1892
BseGI GGATG 5 cut(s) 310, 889, 1165, 1315, 1954
BseJI GATNNNNATC 1 cut(s) 1551
BseLI CCNNNNNNNGG 4 cut(s) 623, 1068, 1100, 1745
BseMI GCAATG 3 cut(s) 580, 1029, 1722
BseNI ACTGG 7 cut(s) 294, 351, 519, 951, 1105, 1504, 1624
BseRI GAGGAG 1 cut(s) 1182
BseSI GKGCMC 2 cut(s) 916, 1063
BseXI GCAGC 4 cut(s) 71, 962, 1352, 1688
Bsh1236I CGCG 2 cut(s) 366, 759
BshFI GGCC 5 cut(s) 506, 914, 1061, 1424, 1796
BshVI ATCGAT 1 cut(s) 33
BsiHKAI GWGCWC 2 cut(s) 52, 1816
BsiHKCI CYCGRG 2 cut(s) 471, 1056
BsiSI CCGG 2 cut(s) 472, 1095
BslFI GGGAC 1 cut(s) 197
BslI CCNNNNNNNGG 4 cut(s) 623, 1068, 1100, 1745
BsmAI GTCTC 3 cut(s) 711, 962, 1257
BsmFI GGGAC 1 cut(s) 197
BsmI GAATGC 2 cut(s) 850, 1273
BsnI GGCC 5 cut(s) 506, 914, 1061, 1424, 1796
BsoBI CYCGRG 2 cut(s) 471, 1056
Bsp119I TTCGAA 1 cut(s) 21
Bsp120I GGGCCC 2 cut(s) 912, 1059
Bsp1286I GDGCHC 4 cut(s) 52, 916, 1063, 1816
Bsp1407I TGTACA 1 cut(s) 1858
Bsp143I GATC 6 cut(s) 30, 34, 463, 1416, 1730, 1735
Bsp1720I GCTNAGC 1 cut(s) 1718
BspACI CCGC 2 cut(s) 184, 757
BspANI GGCC 5 cut(s) 506, 914, 1061, 1424, 1796
BspDI ATCGAT 1 cut(s) 33
BspFNI CGCG 2 cut(s) 366, 759
BspHI TCATGA 1 cut(s) 429
BspLI GGNNCC 5 cut(s) 292, 476, 638, 914, 1061
BspMAI CTGCAG 2 cut(s) 61, 396
BspMI ACCTGC 1 cut(s) 17
BspPI GGATC 2 cut(s) 458, 1730
BspQI GCTCTTC 1 cut(s) 1197
BspT104I TTCGAA 1 cut(s) 21
BspTI CTTAAG 3 cut(s) 769, 977, 1535
BsrBI CCGCTC 1 cut(s) 186
BsrDI GCAATG 3 cut(s) 580, 1029, 1722
BsrGI TGTACA 1 cut(s) 1858
BsrI ACTGG 7 cut(s) 294, 351, 519, 951, 1105, 1504, 1624
BssECI CCNNGG 8 cut(s) 471, 597, 654, 1425, 1705, 1764, 1843, 1892
BssMI GATC 6 cut(s) 30, 34, 463, 1416, 1730, 1735
BssSI CACGAG 3 cut(s) 954, 1123, 1272
BssT1I CCWWGG 2 cut(s) 654, 1705
Bst2BI CACGAG 3 cut(s) 954, 1123, 1272
Bst2UI CCWGG 6 cut(s) 302, 320, 598, 1006, 1765, 1894
Bst4CI ACNGT 4 cut(s) 200, 453, 1082, 1513
Bst6I CTCTTC 2 cut(s) 1197, 1242
BstAFI CTTAAG 3 cut(s) 769, 977, 1535
BstAPI GCANNNNNTGC 1 cut(s) 1682
BstAUI TGTACA 1 cut(s) 1858
BstBI TTCGAA 1 cut(s) 21
BstC8I GCNNGC 5 cut(s) 120, 289, 364, 890, 903
BstDSI CCRYGG 1 cut(s) 1425
BstEII GGTNACC 1 cut(s) 1430
BstF5I GGATG 5 cut(s) 310, 889, 1165, 1315, 1954
BstFNI CGCG 2 cut(s) 366, 759
BstHHI GCGC 1 cut(s) 791
BstKTI GATC 6 cut(s) 33, 37, 466, 1419, 1733, 1738
BstMAI GTCTC 3 cut(s) 711, 962, 1257
BstMBI GATC 6 cut(s) 30, 34, 463, 1416, 1730, 1735
BstNI CCWGG 6 cut(s) 302, 320, 598, 1006, 1765, 1894
BstNSI RCATGY 4 cut(s) 74, 905, 1763, 1990
BstPAI GACNNNNGTC 1 cut(s) 1828
BstPI GGTNACC 1 cut(s) 1430
BstSCI CCNGG 9 cut(s) 300, 318, 470, 471, 596, 1004, 1093, 1763, 1892
BstSFI CTRYAG 2 cut(s) 57, 392
BstSLI GKGCMC 2 cut(s) 916, 1063
BstUI CGCG 2 cut(s) 366, 759
BstV1I GCAGC 4 cut(s) 71, 962, 1352, 1688
BstV2I GAAGAC 1 cut(s) 447
BstX2I RGATCY 2 cut(s) 463, 1735
BstXI CCANNNNNNTGG 1 cut(s) 301
BstYI RGATCY 2 cut(s) 463, 1735
Bsu15I ATCGAT 1 cut(s) 33
BsuRI GGCC 5 cut(s) 506, 914, 1061, 1424, 1796
BsuTUI ATCGAT 1 cut(s) 33
BtgI CCRYGG 1 cut(s) 1425
BtrI CACGTC 1 cut(s) 1817
BtsCI GGATG 5 cut(s) 310, 889, 1165, 1315, 1954
BtsIMutI CAGTG 5 cut(s) 301, 344, 1511, 1576, 1617
BveI ACCTGC 1 cut(s) 17
Cac8I GCNNGC 5 cut(s) 120, 289, 364, 890, 903
CciI TCATGA 1 cut(s) 429
CfoI GCGC 1 cut(s) 791
Cfr13I GGNCC 7 cut(s) 475, 637, 912, 913, 940, 1059, 1060
Cfr9I CCCGGG 1 cut(s) 471
ClaI ATCGAT 1 cut(s) 33
CseI GACGC 1 cut(s) 1547
Csp6I GTAC 8 cut(s) 334, 436, 736, 748, 1178, 1509, 1859, 1920
CviQI GTAC 8 cut(s) 334, 436, 736, 748, 1178, 1509, 1859, 1920
DpnI GATC 6 cut(s) 32, 36, 465, 1418, 1732, 1737
DpnII GATC 6 cut(s) 30, 34, 463, 1416, 1730, 1735
Eam1104I CTCTTC 2 cut(s) 1197, 1242
EarI CTCTTC 2 cut(s) 1197, 1242
Eco130I CCWWGG 2 cut(s) 654, 1705
Eco147I AGGCCT 1 cut(s) 1796
Eco24I GRGCYC 2 cut(s) 916, 1063
Eco47I GGWCC 3 cut(s) 475, 637, 940
Eco57I CTGAAG 4 cut(s) 99, 893, 1552, 1886
Eco88I CYCGRG 2 cut(s) 471, 1056
Eco91I GGTNACC 1 cut(s) 1430
EcoO109I RGGNCCY 1 cut(s) 1060
EcoO65I GGTNACC 1 cut(s) 1430
EcoRII CCWGG 6 cut(s) 300, 318, 596, 1004, 1763, 1892
EcoT14I CCWWGG 2 cut(s) 654, 1705
EcoT22I ATGCAT 1 cut(s) 850
EcoT38I GRGCYC 2 cut(s) 916, 1063
ErhI CCWWGG 2 cut(s) 654, 1705
FaqI GGGAC 1 cut(s) 197
FauI CCCGC 1 cut(s) 764
FblI GTMKAC 1 cut(s) 1832
Fnu4HI GCNGC 4 cut(s) 60, 951, 1341, 1677
FokI GGATG 5 cut(s) 317, 896, 1172, 1302, 1961
FriOI GRGCYC 2 cut(s) 916, 1063
Fsp4HI GCNGC 4 cut(s) 60, 951, 1341, 1677
FspBI CTAG 3 cut(s) 740, 1208, 1809
GlaI GCGC 1 cut(s) 790
GluI GCNGC 4 cut(s) 60, 951, 1341, 1677
GsuI CTGGAG 2 cut(s) 277, 480
HaeIII GGCC 5 cut(s) 506, 914, 1061, 1424, 1796
HapII CCGG 2 cut(s) 472, 1095
HgaI GACGC 1 cut(s) 1547
HhaI GCGC 1 cut(s) 791
Hin6I GCGC 1 cut(s) 789
HinP1I GCGC 1 cut(s) 789
HincII GTYRAC 1 cut(s) 234
HindII GTYRAC 1 cut(s) 234
HinfI GANTC 6 cut(s) 407, 1232, 1250, 1373, 1775, 1784
HpaII CCGG 2 cut(s) 472, 1095
HphI GGTGA 3 cut(s) 745, 1396, 1442
Hpy166II GTNNAC 6 cut(s) 6, 234, 1387, 1509, 1617, 1833
Hpy188III TCNNGA 7 cut(s) 281, 374, 430, 459, 1199, 1274, 1478
Hpy8I GTNNAC 6 cut(s) 6, 234, 1387, 1509, 1617, 1833
HpyAV CCTTC 9 cut(s) 17, 74, 559, 791, 1177, 1363, 1459, 1747, 1861
HpyCH4III ACNGT 4 cut(s) 200, 453, 1082, 1513
HpyCH4IV ACGT 8 cut(s) 46, 482, 493, 588, 895, 1132, 1407, 1816
HpySE526I ACGT 8 cut(s) 46, 482, 493, 588, 895, 1132, 1407, 1816
HspAI GCGC 1 cut(s) 789
Kzo9I GATC 6 cut(s) 30, 34, 463, 1416, 1730, 1735
LguI GCTCTTC 1 cut(s) 1197
LmnI GCTCC 5 cut(s) 296, 658, 1468, 1707, 1769
Lsp1109I GCAGC 4 cut(s) 71, 962, 1352, 1688
LweI GCATC 7 cut(s) 274, 349, 857, 1324, 1327, 1651, 1689
MaeI CTAG 3 cut(s) 740, 1208, 1809
MaeII ACGT 8 cut(s) 46, 482, 493, 588, 895, 1132, 1407, 1816
MaeIII GTNAC 6 cut(s) 296, 1076, 1128, 1186, 1221, 1430
MalI GATC 6 cut(s) 32, 36, 465, 1418, 1732, 1737
MbiI CCGCTC 1 cut(s) 186
MboI GATC 6 cut(s) 30, 34, 463, 1416, 1730, 1735
MflI RGATCY 2 cut(s) 463, 1735
MhlI GDGCHC 4 cut(s) 52, 916, 1063, 1816
MluCI AATT 8 cut(s) 171, 309, 424, 610, 1034, 1211, 1238, 1562
MlyI GAGTC 3 cut(s) 401, 1259, 1784
MmeI TCCRAC 2 cut(s) 604, 1137
Mph1103I ATGCAT 1 cut(s) 850
MroXI GAANNNNTTC 3 cut(s) 417, 837, 1102
MseI TTAA 7 cut(s) 222, 722, 770, 824, 978, 1530, 1536
MslI CAYNNNNRTG 1 cut(s) 1047
MspA1I CMGCKG 3 cut(s) 62, 1679, 1864
MspCI CTTAAG 3 cut(s) 769, 977, 1535
MspI CCGG 2 cut(s) 472, 1095
MspR9I CCNGG 9 cut(s) 302, 320, 472, 473, 598, 1006, 1095, 1765, 1894
Mva1269I GAATGC 2 cut(s) 850, 1273
MvaI CCWGG 6 cut(s) 302, 320, 598, 1006, 1765, 1894
MvnI CGCG 2 cut(s) 366, 759
NciI CCSGG 3 cut(s) 472, 473, 1095
NdeII GATC 6 cut(s) 30, 34, 463, 1416, 1730, 1735
NlaIV GGNNCC 5 cut(s) 292, 476, 638, 914, 1061
NmuCI GTSAC 4 cut(s) 296, 1186, 1221, 1430
NsiI ATGCAT 1 cut(s) 850
NspI RCATGY 4 cut(s) 74, 905, 1763, 1990
NspV TTCGAA 1 cut(s) 21
PaeI GCATGC 1 cut(s) 905
PagI TCATGA 1 cut(s) 429
PaqCI CACCTGC 1 cut(s) 17
PceI AGGCCT 1 cut(s) 1796
PciI ACATGT 1 cut(s) 1986
PciSI GCTCTTC 1 cut(s) 1197
PctI GAATGC 2 cut(s) 850, 1273
PdmI GAANNNNTTC 3 cut(s) 417, 837, 1102
PfeI GAWTC 3 cut(s) 1232, 1373, 1784
PflMI CCANNNNNTGG 1 cut(s) 1745
PfoI TCCNGGA 1 cut(s) 1093
PkrI GCNGC 4 cut(s) 61, 952, 1342, 1678
PleI GAGTC 3 cut(s) 401, 1258, 1783
PpsI GAGTC 3 cut(s) 401, 1258, 1783
PscI ACATGT 1 cut(s) 1986
PshAI GACNNNNGTC 1 cut(s) 1828
PshBI ATTAAT 1 cut(s) 824
PsiI TTATAA 2 cut(s) 581, 1839
Psp1406I AACGTT 2 cut(s) 482, 588
Psp6I CCWGG 6 cut(s) 300, 318, 596, 1004, 1763, 1892
PspEI GGTNACC 1 cut(s) 1430
PspGI CCWGG 6 cut(s) 300, 318, 596, 1004, 1763, 1892
PspN4I GGNNCC 5 cut(s) 292, 476, 638, 914, 1061
PspOMI GGGCCC 2 cut(s) 912, 1059
PspPI GGNCC 7 cut(s) 475, 637, 912, 913, 940, 1059, 1060
PstI CTGCAG 2 cut(s) 61, 396
PsuI RGATCY 2 cut(s) 463, 1735
PvuII CAGCTG 3 cut(s) 62, 1679, 1864
RsaI GTAC 8 cut(s) 335, 437, 737, 749, 1179, 1510, 1860, 1921
RsaNI GTAC 8 cut(s) 334, 436, 736, 748, 1178, 1509, 1859, 1920
RseI CAYNNNNRTG 1 cut(s) 1047
SapI GCTCTTC 1 cut(s) 1197
SaqAI TTAA 7 cut(s) 222, 722, 770, 824, 978, 1530, 1536
SatI GCNGC 4 cut(s) 60, 951, 1341, 1677
Sau3AI GATC 6 cut(s) 30, 34, 463, 1416, 1730, 1735
Sau96I GGNCC 7 cut(s) 475, 637, 912, 913, 940, 1059, 1060
ScaI AGTACT 1 cut(s) 437
SchI GAGTC 3 cut(s) 401, 1259, 1784
ScrFI CCNGG 9 cut(s) 302, 320, 472, 473, 598, 1006, 1095, 1765, 1894
SduI GDGCHC 4 cut(s) 52, 916, 1063, 1816
SfaNI GCATC 7 cut(s) 274, 349, 857, 1324, 1327, 1651, 1689
SfcI CTRYAG 2 cut(s) 57, 392
SfuI TTCGAA 1 cut(s) 21
SinI GGWCC 3 cut(s) 475, 637, 940
SmaI CCCGGG 1 cut(s) 473
SmiMI CAYNNNNRTG 1 cut(s) 1047
SmlI CTYRAG 4 cut(s) 439, 769, 977, 1535
SmoI CTYRAG 4 cut(s) 439, 769, 977, 1535
SphI GCATGC 1 cut(s) 905
Sse9I AATT 8 cut(s) 171, 309, 424, 610, 1034, 1211, 1238, 1562
SseBI AGGCCT 1 cut(s) 1796
SsiI CCGC 2 cut(s) 184, 757
SspI AATATT 1 cut(s) 1528
SspMI CTAG 3 cut(s) 740, 1208, 1809
StuI AGGCCT 1 cut(s) 1796
StyD4I CCNGG 9 cut(s) 300, 318, 470, 471, 596, 1004, 1093, 1763, 1892
StyI CCWWGG 2 cut(s) 654, 1705
TaaI ACNGT 4 cut(s) 200, 453, 1082, 1513
TaiI ACGT 8 cut(s) 49, 485, 496, 591, 898, 1135, 1410, 1819
TaqI TCGA 2 cut(s) 21, 33
TaqII GACCGA 1 cut(s) 96
TasI AATT 8 cut(s) 171, 309, 424, 610, 1034, 1211, 1238, 1562
TatI WGTACW 5 cut(s) 435, 1177, 1508, 1858, 1919
TfiI GAWTC 3 cut(s) 1232, 1373, 1784
Tru1I TTAA 7 cut(s) 222, 722, 770, 824, 978, 1530, 1536
Tru9I TTAA 7 cut(s) 222, 722, 770, 824, 978, 1530, 1536
TscAI CASTG 5 cut(s) 301, 351, 1511, 1576, 1624
TseFI GTSAC 4 cut(s) 296, 1186, 1221, 1430
TseI GCWGC 4 cut(s) 59, 950, 1340, 1676
Tsp45I GTSAC 4 cut(s) 296, 1186, 1221, 1430
TspGWI ACGGA 1 cut(s) 896
TspMI CCCGGG 1 cut(s) 471
TspRI CASTG 5 cut(s) 301, 351, 1511, 1576, 1624
Van91I CCANNNNNTGG 1 cut(s) 1745
Vha464I CTTAAG 3 cut(s) 769, 977, 1535
VpaK11BI GGWCC 3 cut(s) 475, 637, 940
VspI ATTAAT 1 cut(s) 824
XapI RAATTY 3 cut(s) 171, 309, 424
XceI RCATGY 4 cut(s) 74, 905, 1763, 1990
XmaI CCCGGG 1 cut(s) 471
XmiI GTMKAC 1 cut(s) 1832
XmnI GAANNNNTTC 3 cut(s) 417, 837, 1102
XspI CTAG 3 cut(s) 740, 1208, 1809
ZrmI AGTACT 1 cut(s) 437
Zsp2I ATGCAT 1 cut(s) 850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.