pycom16g08360

palmitoyl-(protein) hydrolase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0007162
Physical Location & Seq
Forward (+)
5566004 .. 5568646
2643 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1407 bp
ATGTTGAGAAGTTTGGAGAAAATGATAAGACTATGGATTGCGGCCCTGCAATTTTCGGAGCTTTTTGTGAGCAGCCTGGTTCACTTGCTGTACGGGTTTTACATCTTCAGCACCGCCGTGGCCGGCGATCTGTCGCAGGCGCTGAGCAATTTGCAATCGAAGCCGAACATGAGCATTGAGGTGAAGGATGTGGTGGCGCAGAGAGACCCGTCGGCCAATGGCAGCCTGCCACCTATTGTTTTGGTTCATGGGATATTTGGTTTTGGCAAAGGGAGATTGGGAGGTTTATCGTATTTCGCCGGGGCGGAGAAGAAGGATGAAAGGGTTCTGGTGCCGGATTTGGGATCTCTAACGAGCATTTATGATAGGGCTTGTGAATTGTTCTACTATTTGAAGGGCGGGCGAGTCGATTATGGTGAAGAACACAGCAAGGCTTGTGGGCATTCACAATTCGGTCGAGTTTACGAACAAGGGCACTACCCTGAATGGGATGAGGATCACCCTATTCACTTTGTCGGCCATTCTGCCGGAGCACAGGTTGTCCGTGTGCTGCAGCAAATGCTTGCTGATAAGGCGTTCAAGGGATTTGAGAACACTAATGAGAATTGGGTATTGAGCATCACGTCATTGTCAGGAGCATTCAATGGAACAACAAGAACCTACTTGGATGGAATTCAGCCAGAAGATGGAAAAACCTTGAAACCTATATGTCTGTTGCAGTTATGCCGGCTAGGAGTGATAATTTACGATTGGTTGGACATTCCCTGGCTAAAGGCTTATTACAACTTTGGGTTTGATCACTATAACGTGACCTGGAAGAAAGTGGGCGTTAGGGGTCTTGTTGATTGCCTCTTGGGAAACTCAGGCCCATTCGCTTCTACCGATTGGATTCTCCCGGACCTCACACTTCAAGGCTCCGCAAGACTCAACAGCCATCTCCATTCCTTTCCCAACACATACTACTTCAGCTATGCCACTAAGCGTACGAGGAAGGTGTTGGGTGTCACAGTTCCATCAAGCATATTTGGAATTCATCCATTGCTTTTCATTAGAGTATTGCAAATGAGCCAATGGCGGCACCCTCCTGATGTCCCTCCCCCTTACAAAGGCTACAGGGATGAGGATTGGCAGGACAATGATGGAGCTTTGAATACCATCTCCATGACTCGCCCTCTTCTCCCCATTGAACATCCCAGTCGGTTTGTAAAAGATGATTCAGATTGTCATCCATTGCAACCTGGCATCTGGTACTACAAGATTGTGGAAGCTGATCACATATTCTTCATTATTAATCGGGAGAGGGCCGGAGTTCAGTTTGATCTGATATACGACAGCATTTTCGAACGCTGCAGAAAGCATGTGTTTAGAAAAACTCCGCAGACTTTACCGAACGAAACACACCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

469

Amino Acids

53.24

Weight (kDa)

6.83

Isoelectric Point (pI)

38.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lip_C PF24708 78 - 191 8.7e-21 Lipase-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 331, 1077
AccB7I CCANNNNNTGG 1 cut(s) 686
AciI CCGC 7 cut(s) 41, 114, 305, 399, 918, 1075, 1376
AclWI GGATC 2 cut(s) 352, 504
AcoI YGGCCR 3 cut(s) 120, 213, 517
AcsI RAATTY 2 cut(s) 672, 1029
AcuI CTGAAG 2 cut(s) 91, 949
AfaI GTAC 3 cut(s) 92, 985, 1250
AfiI CCNNNNNNNGG 4 cut(s) 341, 487, 686, 1106
AgsI TTSAA 7 cut(s) 394, 580, 643, 700, 911, 1150, 1187
AjiI CACGTC 1 cut(s) 624
AjnI CCWGG 4 cut(s) 75, 764, 812, 1237
AleI CACNNNNGTG 1 cut(s) 116
AluBI AGCT 4 cut(s) 61, 969, 1145, 1268
AluI AGCT 4 cut(s) 61, 969, 1145, 1268
Alw21I GWGCWC 1 cut(s) 535
Alw26I GTCTC 1 cut(s) 198
AlwI GGATC 2 cut(s) 352, 504
AlwNI CAGNNNCTG 1 cut(s) 142
AoxI GGCC 6 cut(s) 42, 120, 213, 517, 865, 1302
ApeKI GCWGC 5 cut(s) 72, 222, 550, 553, 1347
ApoI RAATTY 2 cut(s) 672, 1029
ArsI GACNNNNNNTTYG 2 cut(s) 1322, 1354
AseI ATTAAT 1 cut(s) 1290
Asp700I GAANNNNTTC 1 cut(s) 324
AspLEI GCGC 2 cut(s) 142, 199
AspS9I GGNCC 4 cut(s) 43, 866, 898, 1302
AsuC2I CCSGG 2 cut(s) 301, 896
AsuHPI GGTGA 3 cut(s) 193, 428, 491
AsuII TTCGAA 1 cut(s) 1341
AvaII GGWCC 1 cut(s) 898
BaeGI GKGCMC 1 cut(s) 477
BanI GGYRCC 2 cut(s) 331, 1077
Bbv12I GWGCWC 1 cut(s) 535
BbvI GCAGC 5 cut(s) 84, 234, 537, 565, 1334
BccI CCATC 6 cut(s) 662, 680, 942, 1021, 1133, 1163
BceAI ACGGC 1 cut(s) 101
BciT130I CCWGG 4 cut(s) 77, 766, 814, 1239
BclI TGATCA 2 cut(s) 796, 1270
BcnI CCSGG 2 cut(s) 301, 896
BcoDI GTCTC 1 cut(s) 198
BfaI CTAG 1 cut(s) 731
BfmI CTRYAG 3 cut(s) 551, 1111, 1348
BfoI RGCGCY 1 cut(s) 143
BisI GCNGC 7 cut(s) 42, 73, 223, 551, 554, 1076, 1348
BlpI GCTNAGC 1 cut(s) 143
BlsI GCNGC 7 cut(s) 43, 74, 224, 552, 555, 1077, 1349
Bme1390I CCNGG 6 cut(s) 77, 301, 766, 814, 896, 1239
Bme18I GGWCC 1 cut(s) 898
BmgBI CACGTC 1 cut(s) 624
BmgT120I GGNCC 4 cut(s) 43, 866, 898, 1302
BmiI GGNNCC 3 cut(s) 333, 916, 1079
BmrFI CCNGG 6 cut(s) 77, 301, 766, 814, 896, 1239
BmrI ACTGGG 1 cut(s) 1188
BmsI GCATC 2 cut(s) 627, 1251
BmuI ACTGGG 1 cut(s) 1188
Bpu1102I GCTNAGC 1 cut(s) 143
Bpu14I TTCGAA 1 cut(s) 1341
BpuMI CCSGG 2 cut(s) 301, 896
BsaBI GATNNNNATC 2 cut(s) 495, 1224
BsaI GGTCTC 1 cut(s) 198
BsaJI CCNNGG 3 cut(s) 117, 300, 764
BsaXI ACNNNNNCTCC 2 cut(s) 522, 552
Bsc4I CCNNNNNNNGG 4 cut(s) 341, 487, 686, 1106
Bse118I RCCGGY 2 cut(s) 122, 726
Bse1I ACTGG 1 cut(s) 1194
Bse3DI GCAATG 2 cut(s) 1037, 1229
Bse8I GATNNNNATC 2 cut(s) 495, 1224
BseBI CCWGG 4 cut(s) 77, 766, 814, 1239
BseDI CCNNGG 3 cut(s) 117, 300, 764
BseGI GGATG 8 cut(s) 193, 322, 496, 673, 1033, 1123, 1189, 1225
BseJI GATNNNNATC 2 cut(s) 495, 1224
BseLI CCNNNNNNNGG 4 cut(s) 341, 487, 686, 1106
BseMI GCAATG 2 cut(s) 1037, 1229
BseMII CTCAG 2 cut(s) 134, 876
BseNI ACTGG 1 cut(s) 1194
BseSI GKGCMC 1 cut(s) 477
BseXI GCAGC 5 cut(s) 84, 234, 537, 565, 1334
Bsh1285I CGRYCG 1 cut(s) 457
BshFI GGCC 6 cut(s) 44, 122, 215, 519, 867, 1304
BshNI GGYRCC 2 cut(s) 331, 1077
BsiEI CGRYCG 1 cut(s) 457
BsiHKAI GWGCWC 1 cut(s) 535
BsiSI CCGG 7 cut(s) 123, 300, 335, 528, 727, 896, 1305
BsiWI CGTACG 1 cut(s) 983
BslFI GGGAC 1 cut(s) 1076
BslI CCNNNNNNNGG 4 cut(s) 341, 487, 686, 1106
BsmAI GTCTC 1 cut(s) 198
BsmFI GGGAC 1 cut(s) 1076
BsmI GAATGC 2 cut(s) 442, 638
BsnI GGCC 6 cut(s) 44, 122, 215, 519, 867, 1304
Bso31I GGTCTC 1 cut(s) 198
Bsp119I TTCGAA 1 cut(s) 1341
Bsp1286I GDGCHC 2 cut(s) 477, 535
Bsp143I GATC 6 cut(s) 127, 344, 496, 796, 1270, 1318
Bsp1720I GCTNAGC 1 cut(s) 143
BspACI CCGC 7 cut(s) 41, 114, 305, 399, 918, 1075, 1376
BspANI GGCC 6 cut(s) 44, 122, 215, 519, 867, 1304
BspCNI CTCAG 2 cut(s) 135, 875
BspLI GGNNCC 3 cut(s) 333, 916, 1079
BspMAI CTGCAG 2 cut(s) 555, 1352
BspPI GGATC 2 cut(s) 352, 504
BspT104I TTCGAA 1 cut(s) 1341
BspT107I GGYRCC 2 cut(s) 331, 1077
BspTNI GGTCTC 1 cut(s) 198
BsrDI GCAATG 2 cut(s) 1037, 1229
BsrFI RCCGGY 2 cut(s) 122, 726
BsrI ACTGG 1 cut(s) 1194
BssAI RCCGGY 2 cut(s) 122, 726
BssECI CCNNGG 3 cut(s) 117, 300, 764
BssMI GATC 6 cut(s) 127, 344, 496, 796, 1270, 1318
Bst2UI CCWGG 4 cut(s) 77, 766, 814, 1239
Bst4CI ACNGT 1 cut(s) 1009
Bst6I CTCTTC 1 cut(s) 1179
BstAPI GCANNNNNTGC 1 cut(s) 559
BstBI TTCGAA 1 cut(s) 1341
BstC8I GCNNGC 6 cut(s) 124, 138, 227, 401, 564, 728
BstDEI CTNAG 3 cut(s) 143, 862, 978
BstDSI CCRYGG 1 cut(s) 117
BstENI CCTNNNNNAGG 1 cut(s) 1104
BstF5I GGATG 8 cut(s) 193, 322, 496, 673, 1033, 1123, 1189, 1225
BstH2I RGCGCY 1 cut(s) 143
BstHHI GCGC 2 cut(s) 142, 199
BstKTI GATC 6 cut(s) 130, 347, 499, 799, 1273, 1321
BstMAI GTCTC 1 cut(s) 198
BstMBI GATC 6 cut(s) 127, 344, 496, 796, 1270, 1318
BstMCI CGRYCG 1 cut(s) 457
BstMWI GCNNNNNNNGC 3 cut(s) 160, 559, 572
BstNI CCWGG 4 cut(s) 77, 766, 814, 1239
BstNSI RCATGY 1 cut(s) 1361
BstSCI CCNGG 6 cut(s) 75, 299, 764, 812, 894, 1237
BstSFI CTRYAG 3 cut(s) 551, 1111, 1348
BstSLI GKGCMC 1 cut(s) 477
BstV1I GCAGC 5 cut(s) 84, 234, 537, 565, 1334
BstX2I RGATCY 1 cut(s) 344
BstYI RGATCY 1 cut(s) 344
BsuRI GGCC 6 cut(s) 44, 122, 215, 519, 867, 1304
BtgI CCRYGG 1 cut(s) 117
BtrI CACGTC 1 cut(s) 624
BtsCI GGATG 8 cut(s) 193, 322, 496, 673, 1033, 1123, 1189, 1225
Cac8I GCNNGC 6 cut(s) 124, 138, 227, 401, 564, 728
CaiI CAGNNNCTG 1 cut(s) 142
CfoI GCGC 2 cut(s) 142, 199
Cfr10I RCCGGY 2 cut(s) 122, 726
Cfr13I GGNCC 4 cut(s) 43, 866, 898, 1302
Csp6I GTAC 3 cut(s) 91, 984, 1249
CspCI CAANNNNNGTGG 2 cut(s) 418, 453
CviAII CATG 4 cut(s) 169, 248, 1162, 1358
CviQI GTAC 3 cut(s) 91, 984, 1249
DdeI CTNAG 3 cut(s) 143, 862, 978
DpnI GATC 6 cut(s) 129, 346, 498, 798, 1272, 1320
DpnII GATC 6 cut(s) 127, 344, 496, 796, 1270, 1318
EaeI YGGCCR 3 cut(s) 120, 213, 517
Eam1104I CTCTTC 1 cut(s) 1179
EarI CTCTTC 1 cut(s) 1179
EciI GGCGGA 1 cut(s) 320
Eco31I GGTCTC 1 cut(s) 198
Eco47I GGWCC 1 cut(s) 898
Eco57I CTGAAG 2 cut(s) 91, 949
EcoNI CCTNNNNNAGG 1 cut(s) 1104
EcoRI GAATTC 2 cut(s) 672, 1029
EcoRII CCWGG 4 cut(s) 75, 764, 812, 1237
FaeI CATG 4 cut(s) 172, 251, 1165, 1361
FaqI GGGAC 1 cut(s) 1076
FatI CATG 4 cut(s) 168, 247, 1161, 1357
FauI CCCGC 1 cut(s) 392
FbaI TGATCA 2 cut(s) 796, 1270
Fnu4HI GCNGC 7 cut(s) 42, 73, 223, 551, 554, 1076, 1348
FokI GGATG 8 cut(s) 200, 329, 503, 680, 1020, 1130, 1176, 1212
Fsp4HI GCNGC 7 cut(s) 42, 73, 223, 551, 554, 1076, 1348
FspBI CTAG 1 cut(s) 731
GlaI GCGC 2 cut(s) 141, 198
GluI GCNGC 7 cut(s) 42, 73, 223, 551, 554, 1076, 1348
HaeII RGCGCY 1 cut(s) 143
HaeIII GGCC 6 cut(s) 44, 122, 215, 519, 867, 1304
HapII CCGG 7 cut(s) 123, 300, 335, 528, 727, 896, 1305
HhaI GCGC 2 cut(s) 142, 199
Hin1II CATG 4 cut(s) 172, 251, 1165, 1361
Hin6I GCGC 2 cut(s) 140, 197
HinP1I GCGC 2 cut(s) 140, 197
HinfI GANTC 5 cut(s) 405, 889, 924, 1165, 1214
HpaII CCGG 7 cut(s) 123, 300, 335, 528, 727, 896, 1305
HphI GGTGA 3 cut(s) 193, 428, 491
Hpy166II GTNNAC 2 cut(s) 82, 463
Hpy188I TCNGA 3 cut(s) 58, 1219, 1323
Hpy188III TCNNGA 3 cut(s) 633, 1085, 1295
Hpy8I GTNNAC 2 cut(s) 82, 463
Hpy99I CGWCG 1 cut(s) 214
HpyAV CCTTC 4 cut(s) 178, 307, 388, 985
HpyCH4III ACNGT 1 cut(s) 1009
HpyCH4IV ACGT 2 cut(s) 623, 807
HpyCH4V TGCA 7 cut(s) 49, 154, 553, 718, 1060, 1234, 1350
HpyF10VI GCNNNNNNNGC 3 cut(s) 160, 559, 572
HpyF3I CTNAG 3 cut(s) 143, 862, 978
HpySE526I ACGT 2 cut(s) 623, 807
Hsp92II CATG 4 cut(s) 172, 251, 1165, 1361
HspAI GCGC 2 cut(s) 140, 197
KroI GCCGGC 2 cut(s) 122, 726
KroNI GCCGGC 2 cut(s) 124, 728
Ksp22I TGATCA 2 cut(s) 796, 1270
Kzo9I GATC 6 cut(s) 127, 344, 496, 796, 1270, 1318
LmnI GCTCC 5 cut(s) 58, 530, 635, 920, 1142
Lsp1109I GCAGC 5 cut(s) 84, 234, 537, 565, 1334
LweI GCATC 2 cut(s) 627, 1251
MaeI CTAG 1 cut(s) 731
MaeII ACGT 2 cut(s) 623, 807
MaeIII GTNAC 2 cut(s) 808, 1003
MalI GATC 6 cut(s) 129, 346, 498, 798, 1272, 1320
MboI GATC 6 cut(s) 127, 344, 496, 796, 1270, 1318
MboII GAAGA 7 cut(s) 97, 322, 431, 695, 829, 1166, 1273
MflI RGATCY 1 cut(s) 344
MhlI GDGCHC 2 cut(s) 477, 535
MluCI AATT 8 cut(s) 50, 148, 377, 449, 604, 672, 741, 1029
MlyI GAGTC 3 cut(s) 414, 918, 1159
MmeI TCCRAC 1 cut(s) 735
MroNI GCCGGC 2 cut(s) 122, 726
MroXI GAANNNNTTC 1 cut(s) 324
MseI TTAA 1 cut(s) 1290
MslI CAYNNNNRTG 3 cut(s) 116, 179, 1160
MspI CCGG 7 cut(s) 123, 300, 335, 528, 727, 896, 1305
MspR9I CCNGG 6 cut(s) 77, 301, 766, 814, 896, 1239
Mva1269I GAATGC 2 cut(s) 442, 638
MvaI CCWGG 4 cut(s) 77, 766, 814, 1239
MwoI GCNNNNNNNGC 3 cut(s) 160, 559, 572
NaeI GCCGGC 2 cut(s) 124, 728
NciI CCSGG 2 cut(s) 301, 896
NdeII GATC 6 cut(s) 127, 344, 496, 796, 1270, 1318
NgoMIV GCCGGC 2 cut(s) 122, 726
NlaIII CATG 4 cut(s) 172, 251, 1165, 1361
NlaIV GGNNCC 3 cut(s) 333, 916, 1079
NmuCI GTSAC 2 cut(s) 808, 1003
NspI RCATGY 1 cut(s) 1361
NspV TTCGAA 1 cut(s) 1341
OliI CACNNNNGTG 1 cut(s) 116
PcsI WCGNNNNNNNCGW 1 cut(s) 879
PctI GAATGC 2 cut(s) 442, 638
PdiI GCCGGC 2 cut(s) 124, 728
PdmI GAANNNNTTC 1 cut(s) 324
PfeI GAWTC 2 cut(s) 889, 1214
Pfl23II CGTACG 1 cut(s) 983
PflMI CCANNNNNTGG 1 cut(s) 686
PfoI TCCNGGA 1 cut(s) 894
PkrI GCNGC 7 cut(s) 43, 74, 224, 552, 555, 1077, 1349
PleI GAGTC 3 cut(s) 413, 918, 1159
PpsI GAGTC 3 cut(s) 413, 918, 1159
PshBI ATTAAT 1 cut(s) 1290
Psp6I CCWGG 4 cut(s) 75, 764, 812, 1237
PspGI CCWGG 4 cut(s) 75, 764, 812, 1237
PspLI CGTACG 1 cut(s) 983
PspN4I GGNNCC 3 cut(s) 333, 916, 1079
PspPI GGNCC 4 cut(s) 43, 866, 898, 1302
PstI CTGCAG 2 cut(s) 555, 1352
PstNI CAGNNNCTG 1 cut(s) 142
PsuI RGATCY 1 cut(s) 344
RsaI GTAC 3 cut(s) 92, 985, 1250
RsaNI GTAC 3 cut(s) 91, 984, 1249
RseI CAYNNNNRTG 3 cut(s) 116, 179, 1160
SaqAI TTAA 1 cut(s) 1290
SatI GCNGC 7 cut(s) 42, 73, 223, 551, 554, 1076, 1348
Sau3AI GATC 6 cut(s) 127, 344, 496, 796, 1270, 1318
Sau96I GGNCC 4 cut(s) 43, 866, 898, 1302
SchI GAGTC 3 cut(s) 414, 918, 1159
ScrFI CCNGG 6 cut(s) 77, 301, 766, 814, 896, 1239
SduI GDGCHC 2 cut(s) 477, 535
SfaNI GCATC 2 cut(s) 627, 1251
SfcI CTRYAG 3 cut(s) 551, 1111, 1348
SfuI TTCGAA 1 cut(s) 1341
SinI GGWCC 1 cut(s) 898
SmiMI CAYNNNNRTG 3 cut(s) 116, 179, 1160
Sse9I AATT 8 cut(s) 50, 148, 377, 449, 604, 672, 741, 1029
SsiI CCGC 7 cut(s) 41, 114, 305, 399, 918, 1075, 1376
SspMI CTAG 1 cut(s) 731
StyD4I CCNGG 6 cut(s) 75, 299, 764, 812, 894, 1237
TaaI ACNGT 1 cut(s) 1009
TaiI ACGT 2 cut(s) 626, 810
TaqI TCGA 4 cut(s) 158, 408, 457, 1341
TaqII GACCGA 1 cut(s) 443
TasI AATT 8 cut(s) 50, 148, 377, 449, 604, 672, 741, 1029
TauI GCSGC 2 cut(s) 44, 1078
TfiI GAWTC 2 cut(s) 889, 1214
Tru1I TTAA 1 cut(s) 1290
Tru9I TTAA 1 cut(s) 1290
TseFI GTSAC 2 cut(s) 808, 1003
TseI GCWGC 5 cut(s) 72, 222, 550, 553, 1347
Tsp45I GTSAC 2 cut(s) 808, 1003
TspDTI ATGAA 5 cut(s) 236, 333, 1022, 1036, 1273
TspGWI ACGGA 1 cut(s) 533
Van91I CCANNNNNTGG 1 cut(s) 686
VpaK11BI GGWCC 1 cut(s) 898
VspI ATTAAT 1 cut(s) 1290
XagI CCTNNNNNAGG 1 cut(s) 1104
XapI RAATTY 2 cut(s) 672, 1029
XceI RCATGY 1 cut(s) 1361
XmnI GAANNNNTTC 1 cut(s) 324
XspI CTAG 1 cut(s) 731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.