pycom16g09430

Lysine histidine transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0006982
Physical Location & Seq
Forward (+)
6319436 .. 6322158
2723 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1326 bp
ATGTTTGAAGGGCGTCAGAGGAAGCTGAAGAGGCGAGGCAGAAGCAGAAGCAGATTGACGATTGGCTTCCGGTCACTTCTGCTAGGAATGCCAAATGGTGGTACTCAGCTTTCCACAATGTCACTGCCATGGTTGGGGCTGGTGTCCTCAGCCTTCCCTATGCCATGGCTGAGCTTGGATGGGGTCCTGGTATTGCTGTCATGCTTCTGTCATGGATCGATCACCCTATACACACTATGGCAAATGGTTGAGATGCATGAAATGGTGCCGGGGAAGCGGTTCGATCGGTACCACGAGCTGGGACAGCATGCCTTTGGGGAAAAGCTGGGGCTCTGGGTCGTTGTGCCCCAACAGCTAATTGTGGAAGTTGGTGTCAATATTGTCTATATGGTCACAGGAGGAAAATCATTGAAGAAGGTCCATGATGTGATTTGCCCTAGCTGCAAAGACATCAAACTCACCTTATGGATTTTGATTTTTGCTTCTGCCCACTTTGTTCTCTCCCATCTCCCCAACTTAAACTCCGTCTCTGGTATCTCGCTTGCTGCCGCAGTCATGTCCTTGAGTTACTCAACGATTGCGTGGGGAGCTGCTATTCACAAGGGGAAGGTACCGAACGTGGACTACAGCTACAAAGCTAAATCCAATGTCGGAGCTGCCTTCAACTTCTTTAGTGGGTTGGGAGACATAGCATTTGCCTACGCTGGCCACAATGTCGTTTTGGAGATCCAAGCAACGATTCCTTCCACACCCGAGAAGCCTTCCAAGGGACCAATGTGGAAAGGAGTTATTGTAGCATACATTGTGGTGGCTTTGTGCTACTTCCCTGTTTGTTTTGTTGGCTACTATATTTACGGAAACTCTGTTGAAGACAACATCCTCATCTCACTCGAAAAACCTGTCTGGCTAATTGCAGCAGCTAACATGTTTGTTGTGATCCATGTCATTGGAAGCTACCAAGTTTTCGCAATGGGAGTTTTTGACATGGTTGAAACTTTTCTGGTCAAGAAAATGAACTTCCCACCTTCTTTCACCCTTCGCTTTATTACTCGCACGATATATGTTGCAATTACCATGGTCATTGGTATGGCCATCCCTTTCTTTGGTGGCCTTCTCGGATTCTTTGGAGGATTTGCTTTCGCCCCAACCACATACTTCCTTCCCTGCATCATGTGGCTCGCCATATACAAACCGAGACGTTTCAGTCTATCTTGGTGCATAAACTGGACCTGCATTATACTGGGAGTTACCTTGATGATTCTAGCACCCATCGGTGCCCTACGGAGTATCATCTTGCAATCGAAAACCTACACATTCTTCTCTTAA

Protein Analysis

442

Amino Acids

49.0

Weight (kDa)

9.5

Isoelectric Point (pI)

42.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 66 - 426 5.4e-87 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1203
Acc36I ACCTGC 1 cut(s) 1238
Acc65I GGTACC 2 cut(s) 288, 610
AccB1I GGYRCC 4 cut(s) 265, 288, 610, 1274
AccB7I CCANNNNNTGG 2 cut(s) 98, 298
AciI CCGC 2 cut(s) 277, 549
AclWI GGATC 3 cut(s) 223, 721, 931
AcoI YGGCCR 2 cut(s) 706, 1089
AcuI CTGAAG 1 cut(s) 47
AcyI GRCGYC 1 cut(s) 13
AfaI GTAC 3 cut(s) 103, 290, 612
AfiI CCNNNNNNNGG 5 cut(s) 98, 134, 298, 767, 1103
AflIII ACRYGT 1 cut(s) 924
AgsI TTSAA 5 cut(s) 8, 412, 664, 869, 992
AjnI CCWGG 1 cut(s) 186
AjuI GAANNNNNNNTTGG 2 cut(s) 723, 755
Alw26I GTCTC 3 cut(s) 532, 678, 1189
AlwI GGATC 3 cut(s) 223, 721, 931
Ama87I CYCGRG 1 cut(s) 752
AoxI GGCC 3 cut(s) 706, 1089, 1108
ApeKI GCWGC 6 cut(s) 441, 545, 590, 656, 914, 917
ArsI GACNNNNNNTTYG 4 cut(s) 677, 709, 885, 917
Asp700I GAANNNNTTC 2 cut(s) 278, 996
Asp718I GGTACC 2 cut(s) 288, 610
AspS9I GGNCC 4 cut(s) 184, 418, 770, 1227
AsuC2I CCSGG 1 cut(s) 270
AsuHPI GGTGA 3 cut(s) 214, 451, 1024
AvaI CYCGRG 1 cut(s) 752
AvaII GGWCC 4 cut(s) 184, 418, 770, 1227
BaeGI GKGCMC 2 cut(s) 348, 1279
BalI TGGCCA 2 cut(s) 708, 1091
BanI GGYRCC 4 cut(s) 265, 288, 610, 1274
BanII GRGCYC 1 cut(s) 333
BauI CACGAG 1 cut(s) 293
BbsI GAAGAC 1 cut(s) 876
BbvCI CCTCAGC 1 cut(s) 148
BbvI GCAGC 6 cut(s) 428, 532, 577, 643, 926, 929
BccI CCATC 4 cut(s) 173, 513, 1100, 1277
BciT130I CCWGG 1 cut(s) 188
BcnI CCSGG 1 cut(s) 270
BcoDI GTCTC 3 cut(s) 532, 678, 1189
BfaI CTAG 3 cut(s) 83, 438, 1262
BfmI CTRYAG 1 cut(s) 625
BfuAI ACCTGC 1 cut(s) 1238
BisI GCNGC 7 cut(s) 442, 546, 549, 591, 657, 915, 918
BlpI GCTNAGC 1 cut(s) 170
BlsI GCNGC 7 cut(s) 443, 547, 550, 592, 658, 916, 919
Bme1390I CCNGG 2 cut(s) 188, 270
Bme18I GGWCC 4 cut(s) 184, 418, 770, 1227
BmeT110I CYCGRG 1 cut(s) 752
BmgT120I GGNCC 4 cut(s) 184, 418, 770, 1227
BmiI GGNNCC 6 cut(s) 185, 267, 290, 612, 771, 1276
BmrFI CCNGG 2 cut(s) 188, 270
BmrI ACTGGG 1 cut(s) 1250
BmsI GCATC 2 cut(s) 243, 1176
BmuI ACTGGG 1 cut(s) 1250
BpiI GAAGAC 1 cut(s) 876
Bpu10I CCTNAGC 1 cut(s) 148
Bpu1102I GCTNAGC 1 cut(s) 170
BpuEI CTTGAG 1 cut(s) 583
BpuMI CCSGG 1 cut(s) 270
Bsa29I ATCGAT 1 cut(s) 218
BsaHI GRCGYC 1 cut(s) 13
BsaJI CCNNGG 5 cut(s) 128, 164, 269, 765, 1074
BsaWI WCCGGW 1 cut(s) 69
BsaXI ACNNNNNCTCC 4 cut(s) 506, 536, 777, 807
Bsc4I CCNNNNNNNGG 5 cut(s) 98, 134, 298, 767, 1103
Bse1I ACTGG 2 cut(s) 1229, 1245
Bse3DI GCAATG 1 cut(s) 975
BseBI CCWGG 1 cut(s) 188
BseCI ATCGAT 1 cut(s) 218
BseDI CCNNGG 5 cut(s) 128, 164, 269, 765, 1074
BseGI GGATG 3 cut(s) 184, 876, 1092
BseLI CCNNNNNNNGG 5 cut(s) 98, 134, 298, 767, 1103
BseMI GCAATG 1 cut(s) 975
BseMII CTCAG 3 cut(s) 119, 161, 162
BseNI ACTGG 2 cut(s) 1229, 1245
BseSI GKGCMC 2 cut(s) 348, 1279
BseXI GCAGC 6 cut(s) 428, 532, 577, 643, 926, 929
BseYI CCCAGC 2 cut(s) 298, 325
Bsh1285I CGRYCG 1 cut(s) 286
BshFI GGCC 3 cut(s) 708, 1091, 1110
BshNI GGYRCC 4 cut(s) 265, 288, 610, 1274
BshVI ATCGAT 1 cut(s) 218
BsiEI CGRYCG 1 cut(s) 286
BsiHKCI CYCGRG 1 cut(s) 752
BsiSI CCGG 2 cut(s) 70, 269
BslFI GGGAC 2 cut(s) 315, 783
BslI CCNNNNNNNGG 5 cut(s) 98, 134, 298, 767, 1103
BsmAI GTCTC 3 cut(s) 532, 678, 1189
BsmBI CGTCTC 2 cut(s) 532, 1189
BsmFI GGGAC 2 cut(s) 315, 783
BsmI GAATGC 1 cut(s) 93
BsnI GGCC 3 cut(s) 708, 1091, 1110
BsoBI CYCGRG 1 cut(s) 752
Bsp1286I GDGCHC 3 cut(s) 333, 348, 1279
Bsp143I GATC 5 cut(s) 215, 219, 283, 726, 936
Bsp1720I GCTNAGC 1 cut(s) 170
Bsp19I CCATGG 3 cut(s) 128, 164, 1074
BspACI CCGC 2 cut(s) 277, 549
BspANI GGCC 3 cut(s) 708, 1091, 1110
BspCNI CTCAG 3 cut(s) 118, 161, 162
BspDI ATCGAT 1 cut(s) 218
BspLI GGNNCC 6 cut(s) 185, 267, 290, 612, 771, 1276
BspMI ACCTGC 1 cut(s) 1238
BspPI GGATC 3 cut(s) 223, 721, 931
BspT107I GGYRCC 4 cut(s) 265, 288, 610, 1274
BsrDI GCAATG 1 cut(s) 975
BsrI ACTGG 2 cut(s) 1229, 1245
BssECI CCNNGG 5 cut(s) 128, 164, 269, 765, 1074
BssMI GATC 5 cut(s) 215, 219, 283, 726, 936
BssNI GRCGYC 1 cut(s) 13
BssSI CACGAG 1 cut(s) 293
BssT1I CCWWGG 4 cut(s) 128, 164, 765, 1074
Bst2BI CACGAG 1 cut(s) 293
Bst2UI CCWGG 1 cut(s) 188
Bst6I CTCTTC 1 cut(s) 23
BstACI GRCGYC 1 cut(s) 13
BstC8I GCNNGC 4 cut(s) 309, 543, 706, 1179
BstDEI CTNAG 3 cut(s) 105, 148, 170
BstDSI CCRYGG 3 cut(s) 128, 164, 1074
BstF5I GGATG 3 cut(s) 184, 876, 1092
BstKTI GATC 5 cut(s) 218, 222, 286, 729, 939
BstMAI GTCTC 3 cut(s) 532, 678, 1189
BstMBI GATC 5 cut(s) 215, 219, 283, 726, 936
BstMCI CGRYCG 1 cut(s) 286
BstMWI GCNNNNNNNGC 7 cut(s) 31, 88, 274, 304, 352, 441, 587
BstNI CCWGG 1 cut(s) 188
BstNSI RCATGY 2 cut(s) 311, 928
BstSCI CCNGG 2 cut(s) 186, 268
BstSFI CTRYAG 1 cut(s) 625
BstSLI GKGCMC 2 cut(s) 348, 1279
BstV1I GCAGC 6 cut(s) 428, 532, 577, 643, 926, 929
BstV2I GAAGAC 1 cut(s) 876
BstX2I RGATCY 1 cut(s) 726
BstXI CCANNNNNNTGG 1 cut(s) 947
BstYI RGATCY 1 cut(s) 726
Bsu15I ATCGAT 1 cut(s) 218
BsuRI GGCC 3 cut(s) 708, 1091, 1110
BsuTUI ATCGAT 1 cut(s) 218
BtgI CCRYGG 3 cut(s) 128, 164, 1074
BtsCI GGATG 3 cut(s) 184, 876, 1092
BtsI GCAGTG 1 cut(s) 122
BtsIMutI CAGTG 1 cut(s) 122
BveI ACCTGC 1 cut(s) 1238
Cac8I GCNNGC 4 cut(s) 309, 543, 706, 1179
Cfr13I GGNCC 4 cut(s) 184, 418, 770, 1227
ClaI ATCGAT 1 cut(s) 218
CseI GACGC 1 cut(s) 2
Csp6I GTAC 3 cut(s) 102, 289, 611
CviQI GTAC 3 cut(s) 102, 289, 611
DdeI CTNAG 3 cut(s) 105, 148, 170
DpnI GATC 5 cut(s) 217, 221, 285, 728, 938
DpnII GATC 5 cut(s) 215, 219, 283, 726, 936
DrdI GACNNNNNNGTC 1 cut(s) 1203
DseDI GACNNNNNNGTC 1 cut(s) 1203
EaeI YGGCCR 2 cut(s) 706, 1089
Eam1104I CTCTTC 1 cut(s) 23
EarI CTCTTC 1 cut(s) 23
Eco130I CCWWGG 4 cut(s) 128, 164, 765, 1074
Eco24I GRGCYC 1 cut(s) 333
Eco47I GGWCC 4 cut(s) 184, 418, 770, 1227
Eco57I CTGAAG 1 cut(s) 47
Eco88I CYCGRG 1 cut(s) 752
EcoO109I RGGNCCY 1 cut(s) 184
EcoRII CCWGG 1 cut(s) 186
EcoT14I CCWWGG 4 cut(s) 128, 164, 765, 1074
EcoT22I ATGCAT 1 cut(s) 258
EcoT38I GRGCYC 1 cut(s) 333
ErhI CCWWGG 4 cut(s) 128, 164, 765, 1074
Esp3I CGTCTC 2 cut(s) 532, 1189
FaqI GGGAC 2 cut(s) 315, 783
Fnu4HI GCNGC 7 cut(s) 442, 546, 549, 591, 657, 915, 918
FokI GGATG 3 cut(s) 191, 863, 1079
FriOI GRGCYC 1 cut(s) 333
Fsp4HI GCNGC 7 cut(s) 442, 546, 549, 591, 657, 915, 918
FspBI CTAG 3 cut(s) 83, 438, 1262
GluI GCNGC 7 cut(s) 442, 546, 549, 591, 657, 915, 918
GsaI CCCAGC 2 cut(s) 302, 329
HaeIII GGCC 3 cut(s) 708, 1091, 1110
HapII CCGG 2 cut(s) 70, 269
HgaI GACGC 1 cut(s) 2
Hin1I GRCGYC 1 cut(s) 13
HinfI GANTC 3 cut(s) 739, 1119, 1258
HpaII CCGG 2 cut(s) 70, 269
HphI GGTGA 3 cut(s) 214, 451, 1024
Hpy166II GTNNAC 1 cut(s) 622
Hpy188I TCNGA 3 cut(s) 18, 653, 1118
Hpy188III TCNNGA 1 cut(s) 1006
Hpy8I GTNNAC 1 cut(s) 622
HpyCH4IV ACGT 2 cut(s) 618, 1198
HpyCH4V TGCA 8 cut(s) 256, 444, 914, 1067, 1167, 1218, 1233, 1297
HpyF10VI GCNNNNNNNGC 7 cut(s) 31, 88, 274, 304, 352, 441, 587
HpyF3I CTNAG 3 cut(s) 105, 148, 170
HpySE526I ACGT 2 cut(s) 618, 1198
Hsp92I GRCGYC 1 cut(s) 13
KpnI GGTACC 2 cut(s) 292, 614
Kzo9I GATC 5 cut(s) 215, 219, 283, 726, 936
LmnI GCTCC 2 cut(s) 587, 653
Lsp1109I GCAGC 6 cut(s) 428, 532, 577, 643, 926, 929
LweI GCATC 2 cut(s) 243, 1176
MaeI CTAG 3 cut(s) 83, 438, 1262
MaeII ACGT 2 cut(s) 618, 1198
MaeIII GTNAC 5 cut(s) 72, 120, 391, 566, 1246
MalI GATC 5 cut(s) 217, 221, 285, 728, 938
MboI GATC 5 cut(s) 215, 219, 283, 726, 936
MboII GAAGA 4 cut(s) 40, 424, 881, 1309
MflI RGATCY 1 cut(s) 726
MhlI GDGCHC 3 cut(s) 333, 348, 1279
MlsI TGGCCA 2 cut(s) 708, 1091
MluCI AATT 3 cut(s) 357, 909, 1068
MluNI TGGCCA 2 cut(s) 708, 1091
MmeI TCCRAC 1 cut(s) 631
MnlI CCTC 7 cut(s) 12, 24, 29, 157, 392, 890, 1121
Mox20I TGGCCA 2 cut(s) 708, 1091
Mph1103I ATGCAT 1 cut(s) 258
MroXI GAANNNNTTC 2 cut(s) 278, 996
MscI TGGCCA 2 cut(s) 708, 1091
MseI TTAA 2 cut(s) 518, 1324
MslI CAYNNNNRTG 3 cut(s) 127, 806, 1085
Msp20I TGGCCA 2 cut(s) 708, 1091
MspI CCGG 2 cut(s) 70, 269
MspR9I CCNGG 2 cut(s) 188, 270
Mva1269I GAATGC 1 cut(s) 93
MvaI CCWGG 1 cut(s) 188
MwoI GCNNNNNNNGC 7 cut(s) 31, 88, 274, 304, 352, 441, 587
NciI CCSGG 1 cut(s) 270
NcoI CCATGG 3 cut(s) 128, 164, 1074
NdeII GATC 5 cut(s) 215, 219, 283, 726, 936
NlaIV GGNNCC 6 cut(s) 185, 267, 290, 612, 771, 1276
NmuCI GTSAC 3 cut(s) 72, 120, 391
NsiI ATGCAT 1 cut(s) 258
NspI RCATGY 2 cut(s) 311, 928
PaeI GCATGC 1 cut(s) 311
PciI ACATGT 1 cut(s) 924
PctI GAATGC 1 cut(s) 93
PdmI GAANNNNTTC 2 cut(s) 278, 996
PfeI GAWTC 3 cut(s) 739, 1119, 1258
PflMI CCANNNNNTGG 2 cut(s) 98, 298
PkrI GCNGC 7 cut(s) 443, 547, 550, 592, 658, 916, 919
Ple19I CGATCG 1 cut(s) 286
PpuMI RGGWCCY 1 cut(s) 184
PscI ACATGT 1 cut(s) 924
Psp5II RGGWCCY 1 cut(s) 184
Psp6I CCWGG 1 cut(s) 186
PspFI CCCAGC 2 cut(s) 298, 325
PspGI CCWGG 1 cut(s) 186
PspN4I GGNNCC 6 cut(s) 185, 267, 290, 612, 771, 1276
PspPI GGNCC 4 cut(s) 184, 418, 770, 1227
PspPPI RGGWCCY 1 cut(s) 184
PsrI GAACNNNNNNTAC 2 cut(s) 608, 640
PsuI RGATCY 1 cut(s) 726
PvuI CGATCG 1 cut(s) 286
RsaI GTAC 3 cut(s) 103, 290, 612
RsaNI GTAC 3 cut(s) 102, 289, 611
RseI CAYNNNNRTG 3 cut(s) 127, 806, 1085
SaqAI TTAA 2 cut(s) 518, 1324
SatI GCNGC 7 cut(s) 442, 546, 549, 591, 657, 915, 918
Sau3AI GATC 5 cut(s) 215, 219, 283, 726, 936
Sau96I GGNCC 4 cut(s) 184, 418, 770, 1227
ScrFI CCNGG 2 cut(s) 188, 270
SduI GDGCHC 3 cut(s) 333, 348, 1279
SfaNI GCATC 2 cut(s) 243, 1176
SfcI CTRYAG 1 cut(s) 625
SinI GGWCC 4 cut(s) 184, 418, 770, 1227
SmiMI CAYNNNNRTG 3 cut(s) 127, 806, 1085
SmlI CTYRAG 1 cut(s) 562
SmoI CTYRAG 1 cut(s) 562
SphI GCATGC 1 cut(s) 311
Sse9I AATT 3 cut(s) 357, 909, 1068
SsiI CCGC 2 cut(s) 277, 549
SspI AATATT 1 cut(s) 379
SspMI CTAG 3 cut(s) 83, 438, 1262
StyD4I CCNGG 2 cut(s) 186, 268
StyI CCWWGG 4 cut(s) 128, 164, 765, 1074
TaiI ACGT 2 cut(s) 621, 1201
TaqI TCGA 4 cut(s) 218, 282, 891, 1301
TasI AATT 3 cut(s) 357, 909, 1068
TauI GCSGC 1 cut(s) 551
TfiI GAWTC 3 cut(s) 739, 1119, 1258
Tru1I TTAA 2 cut(s) 518, 1324
Tru9I TTAA 2 cut(s) 518, 1324
TscAI CASTG 1 cut(s) 129
TseFI GTSAC 3 cut(s) 72, 120, 391
TseI GCWGC 6 cut(s) 441, 545, 590, 656, 914, 917
Tsp45I GTSAC 3 cut(s) 72, 120, 391
TspDTI ATGAA 2 cut(s) 273, 1028
TspGWI ACGGA 3 cut(s) 514, 870, 1297
TspRI CASTG 1 cut(s) 129
Van91I CCANNNNNTGG 2 cut(s) 98, 298
VpaK11BI GGWCC 4 cut(s) 184, 418, 770, 1227
XceI RCATGY 2 cut(s) 311, 928
XmnI GAANNNNTTC 2 cut(s) 278, 996
XspI CTAG 3 cut(s) 83, 438, 1262
Zsp2I ATGCAT 1 cut(s) 258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.