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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g21022 FvH4_4g33231 |
| pyrus_communis | pycom16g21430 pycom16g26140 |
| rosa_laevigata | RLG00000032953 |
| rosa_multiflora | Rmu_sc0006269.1_g000023 |
| rosa_roxburghii | Rroxscaffold_5G00358510 Rroxscaffold_6G00397970 Rroxscaffold_7G00172770 |
| rosa_rugosa | Rorug02G0235100 |
| rosa_samantha | Rh2CG306600 Rh2DG342900 Rh4AG104100 Rh4AG115200 Rh4CG112400 Rh5DG113200 Rh6CG362000 |
| rosa_wichuraiana | Rw1G022480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 725 |
| AcuI | CTGAAG | 2 cut(s) | 215, 411 |
| AfaI | GTAC | 1 cut(s) | 41 |
| AgsI | TTSAA | 6 cut(s) | 332, 548, 669, 709, 743, 754 |
| AluBI | AGCT | 5 cut(s) | 68, 85, 389, 422, 808 |
| AluI | AGCT | 5 cut(s) | 68, 85, 389, 422, 808 |
| Alw21I | GWGCWC | 1 cut(s) | 796 |
| Alw44I | GTGCAC | 1 cut(s) | 792 |
| AlwI | GGATC | 1 cut(s) | 725 |
| ApaLI | GTGCAC | 1 cut(s) | 792 |
| ApeKI | GCWGC | 1 cut(s) | 68 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 612 |
| AspS9I | GGNCC | 1 cut(s) | 185 |
| AsuHPI | GGTGA | 3 cut(s) | 284, 383, 566 |
| AvaII | GGWCC | 1 cut(s) | 185 |
| BaeGI | GKGCMC | 1 cut(s) | 796 |
| BbsI | GAAGAC | 3 cut(s) | 332, 615, 642 |
| Bbv12I | GWGCWC | 1 cut(s) | 796 |
| BbvI | GCAGC | 1 cut(s) | 55 |
| BccI | CCATC | 2 cut(s) | 329, 437 |
| BfaI | CTAG | 4 cut(s) | 24, 44, 98, 416 |
| BfmI | CTRYAG | 2 cut(s) | 132, 478 |
| BisI | GCNGC | 1 cut(s) | 69 |
| BlsI | GCNGC | 1 cut(s) | 70 |
| Bme18I | GGWCC | 1 cut(s) | 185 |
| BmgT120I | GGNCC | 1 cut(s) | 185 |
| BmiI | GGNNCC | 1 cut(s) | 569 |
| BmsI | GCATC | 1 cut(s) | 583 |
| BpiI | GAAGAC | 3 cut(s) | 332, 615, 642 |
| BsaJI | CCNNGG | 1 cut(s) | 17 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 312, 342 |
| BseDI | CCNNGG | 1 cut(s) | 17 |
| BseGI | GGATG | 3 cut(s) | 448, 574, 733 |
| BseMII | CTCAG | 2 cut(s) | 291, 693 |
| BseSI | GKGCMC | 1 cut(s) | 796 |
| BseXI | GCAGC | 1 cut(s) | 55 |
| BsiHKAI | GWGCWC | 1 cut(s) | 796 |
| Bsp1286I | GDGCHC | 1 cut(s) | 796 |
| Bsp143I | GATC | 1 cut(s) | 730 |
| BspCNI | CTCAG | 2 cut(s) | 292, 694 |
| BspLI | GGNNCC | 1 cut(s) | 569 |
| BspPI | GGATC | 1 cut(s) | 725 |
| BssECI | CCNNGG | 1 cut(s) | 17 |
| BssMI | GATC | 1 cut(s) | 730 |
| BssT1I | CCWWGG | 1 cut(s) | 17 |
| Bst4CI | ACNGT | 3 cut(s) | 473, 482, 520 |
| Bst6I | CTCTTC | 1 cut(s) | 552 |
| BstDEI | CTNAG | 5 cut(s) | 53, 229, 300, 640, 702 |
| BstF5I | GGATG | 3 cut(s) | 448, 574, 733 |
| BstKTI | GATC | 1 cut(s) | 733 |
| BstMBI | GATC | 1 cut(s) | 730 |
| BstSFI | CTRYAG | 2 cut(s) | 132, 478 |
| BstSLI | GKGCMC | 1 cut(s) | 796 |
| BstV1I | GCAGC | 1 cut(s) | 55 |
| BstV2I | GAAGAC | 3 cut(s) | 332, 615, 642 |
| BtsCI | GGATG | 3 cut(s) | 448, 574, 733 |
| BtsIMutI | CAGTG | 1 cut(s) | 478 |
| Cfr13I | GGNCC | 1 cut(s) | 185 |
| Csp6I | GTAC | 1 cut(s) | 40 |
| CviAII | CATG | 2 cut(s) | 73, 284 |
| CviQI | GTAC | 1 cut(s) | 40 |
| DdeI | CTNAG | 5 cut(s) | 53, 229, 300, 640, 702 |
| DpnI | GATC | 1 cut(s) | 732 |
| DpnII | GATC | 1 cut(s) | 730 |
| DraI | TTTAAA | 1 cut(s) | 253 |
| Eam1104I | CTCTTC | 1 cut(s) | 552 |
| EarI | CTCTTC | 1 cut(s) | 552 |
| Eco130I | CCWWGG | 1 cut(s) | 17 |
| Eco47I | GGWCC | 1 cut(s) | 185 |
| Eco57I | CTGAAG | 2 cut(s) | 215, 411 |
| EcoT14I | CCWWGG | 1 cut(s) | 17 |
| ErhI | CCWWGG | 1 cut(s) | 17 |
| FaeI | CATG | 2 cut(s) | 76, 287 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 324, 356 |
| FatI | CATG | 2 cut(s) | 72, 283 |
| Fnu4HI | GCNGC | 1 cut(s) | 69 |
| FokI | GGATG | 3 cut(s) | 455, 561, 740 |
| Fsp4HI | GCNGC | 1 cut(s) | 69 |
| FspBI | CTAG | 4 cut(s) | 24, 44, 98, 416 |
| GluI | GCNGC | 1 cut(s) | 69 |
| Hin1II | CATG | 2 cut(s) | 76, 287 |
| HincII | GTYRAC | 1 cut(s) | 694 |
| HindII | GTYRAC | 1 cut(s) | 694 |
| HindIII | AAGCTT | 1 cut(s) | 83 |
| HinfI | GANTC | 3 cut(s) | 94, 149, 665 |
| HpaI | GTTAAC | 1 cut(s) | 694 |
| HphI | GGTGA | 3 cut(s) | 284, 383, 566 |
| Hpy166II | GTNNAC | 3 cut(s) | 185, 694, 794 |
| Hpy188I | TCNGA | 3 cut(s) | 60, 676, 761 |
| Hpy188III | TCNNGA | 2 cut(s) | 98, 383 |
| Hpy8I | GTNNAC | 3 cut(s) | 185, 694, 794 |
| HpyAV | CCTTC | 4 cut(s) | 193, 362, 371, 807 |
| HpyCH4III | ACNGT | 3 cut(s) | 473, 482, 520 |
| HpyCH4V | TGCA | 4 cut(s) | 6, 437, 596, 794 |
| HpyF3I | CTNAG | 5 cut(s) | 53, 229, 300, 640, 702 |
| Hsp92II | CATG | 2 cut(s) | 76, 287 |
| KspAI | GTTAAC | 1 cut(s) | 694 |
| Kzo9I | GATC | 1 cut(s) | 730 |
| LpnPI | CCDG | 1 cut(s) | 714 |
| Lsp1109I | GCAGC | 1 cut(s) | 55 |
| LweI | GCATC | 1 cut(s) | 583 |
| MaeI | CTAG | 4 cut(s) | 24, 44, 98, 416 |
| MaeIII | GTNAC | 3 cut(s) | 127, 380, 473 |
| MalI | GATC | 1 cut(s) | 732 |
| MboI | GATC | 1 cut(s) | 730 |
| MfeI | CAATTG | 1 cut(s) | 773 |
| MhlI | GDGCHC | 1 cut(s) | 796 |
| MluCI | AATT | 1 cut(s) | 773 |
| MnlI | CCTC | 7 cut(s) | 139, 147, 280, 295, 319, 433, 553 |
| MroXI | GAANNNNTTC | 1 cut(s) | 612 |
| MseI | TTAA | 5 cut(s) | 116, 252, 399, 693, 804 |
| MunI | CAATTG | 1 cut(s) | 773 |
| NdeII | GATC | 1 cut(s) | 730 |
| NlaIII | CATG | 2 cut(s) | 76, 287 |
| NlaIV | GGNNCC | 1 cut(s) | 569 |
| NmuCI | GTSAC | 3 cut(s) | 127, 380, 473 |
| PdmI | GAANNNNTTC | 1 cut(s) | 612 |
| PfeI | GAWTC | 3 cut(s) | 94, 149, 665 |
| PkrI | GCNGC | 1 cut(s) | 70 |
| PspN4I | GGNNCC | 1 cut(s) | 569 |
| PspPI | GGNCC | 1 cut(s) | 185 |
| RsaI | GTAC | 1 cut(s) | 41 |
| RsaNI | GTAC | 1 cut(s) | 40 |
| SaqAI | TTAA | 5 cut(s) | 116, 252, 399, 693, 804 |
| SatI | GCNGC | 1 cut(s) | 69 |
| Sau3AI | GATC | 1 cut(s) | 730 |
| Sau96I | GGNCC | 1 cut(s) | 185 |
| SduI | GDGCHC | 1 cut(s) | 796 |
| SfaNI | GCATC | 1 cut(s) | 583 |
| SfcI | CTRYAG | 2 cut(s) | 132, 478 |
| SinI | GGWCC | 1 cut(s) | 185 |
| Sse9I | AATT | 1 cut(s) | 773 |
| SspMI | CTAG | 4 cut(s) | 24, 44, 98, 416 |
| StyI | CCWWGG | 1 cut(s) | 17 |
| TaaI | ACNGT | 3 cut(s) | 473, 482, 520 |
| TaqI | TCGA | 2 cut(s) | 152, 167 |
| TasI | AATT | 1 cut(s) | 773 |
| TfiI | GAWTC | 3 cut(s) | 94, 149, 665 |
| Tru1I | TTAA | 5 cut(s) | 116, 252, 399, 693, 804 |
| Tru9I | TTAA | 5 cut(s) | 116, 252, 399, 693, 804 |
| TscAI | CASTG | 1 cut(s) | 478 |
| TseFI | GTSAC | 3 cut(s) | 127, 380, 473 |
| TseI | GCWGC | 1 cut(s) | 68 |
| Tsp45I | GTSAC | 3 cut(s) | 127, 380, 473 |
| TspDTI | ATGAA | 7 cut(s) | 89, 107, 294, 372, 381, 390, 441 |
| TspRI | CASTG | 1 cut(s) | 478 |
| VneI | GTGCAC | 1 cut(s) | 792 |
| VpaK11BI | GGWCC | 1 cut(s) | 185 |
| XbaI | TCTAGA | 1 cut(s) | 97 |
| XmnI | GAANNNNTTC | 1 cut(s) | 612 |
| XspI | CTAG | 4 cut(s) | 24, 44, 98, 416 |