Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0013640

Physical Location & Seq

Genomic Coordinates Forward (+)

38574653 .. 38582692

Gene Structure 8040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00358510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGGCTTGGGCTCGAGAACCGGATATTTTGATGAACAAAGCTATGTTCGATGTGGGAGCTAGGAAGAGAAAAAGTATTGAGATTGAGGAGTCGGGGTTAGATGAAGATGACAATGCTTATGATATAATGCGGACTAAATTAGCTGATAATACGGATGACAATAATAATGACATTTCAGATGGAGATTATGATCCCGAAGCTGATTTTGTTGATAGTGATTACGGTGGGGATGACGATTCGGACGAGGTTGGTTATAATGATGGGATAGCAAGTAGTGCTGATGCTGAAGCTCCCGGGAAAGATGGTGGAAGTGCTCGTGTCAATGCAGGTGTTAATGATTGTGAAACTAATTGTGGGAGTGATGCAAATGTTACAAATAATTTTAGTCATAGTATTGAAACTGGAAGTTGGGATATGGTGATGAATAATATTCAATTGGAAGATGTAGAAGAGGAAGAAGACCATCTTTCAAATGAGGAATTGAGAAGCCTACAACCAATAACAACTTCAGTACCTCCATCTACATCTGCACCACCTTCCTCAACTTCTACAAGAATAGCTCCACCAACACCATCCACTACTCTAGCACCTCCGCAACGTAATCTTGGTAGAAAATCATCAAAGGCCTCTACTCGCAAACTCTTCAACAACTACGGTGAAGTAAATACTAGGGCAACCCCTTGTTTAAGTCCAAAATGGGAGGAGTTGGAAGTCACGTCCTTTATAATCTATACCATGATCGTTAAAGTACGTACCTTCCAGGCTTCCATGCTCGAACTTTTCAGGGTTTTTTATGCCTCTGGGTCTCTTCCAATTTGCCATAACAGCGGGTGTTGCCGGACGGGCTCTTGGGATCCGGAGGTTCCTGGTTTCGGCTTCTCTTCATTGGCACGGGCTAGGTACGTCTCTTCTTTCTTCTCAAGTAGCGACGCGAGTGTGGGTATTTGGCGATCGGCGTTCGACGACGACACGGGTGTGGAGCGAGTGGTCAATGGTCGGATCATGGAGGCGGTATGCCATGGATCGTATGGCGCCGGTTGCTTCTCTATGGTGGGTCGGTGGACGGAGATTGCAGCGATGGCGTTGGGCTCTCAAGTTGATGGATACAAACGGGTGGAGGTTCTTCGCTCTAAGGAGGCAAGGCATGGTGATTTCCAATCGATCGGTTTCTCGGACAACGGGCGGAAGTTTGGCGTGGCTTCTTTTGTGTGGTTTGGGTTTCTTCGGCGAGGCGAGCTCAAGGGGAGAGTCTTGGTACTCTTGTGGAGGTGGTCCGTCGGCAAGGCACTTGGGAAGAGGGTGGAGGAGTATGGTGGTTCCTTTTTATTTTTGCTTAGAGTAGTTTTTTTGGTTAGTTTTTTGGTTAGGCTTTTTTTGTCATTAGTATGTCCCTACTCATGTGAGCTAGGGTTAGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DBD_Tnp_Mut MULE SWIM

Protein Analysis

472

Amino Acids

51.84

Weight (kDa)

4.77

Isoelectric Point (pI)

43.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013640)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g21022 FvH4_4g33231
pyrus_communis	pycom16g21430 pycom16g26140
rosa_laevigata	RLG00000032953
rosa_multiflora	Rmu_sc0006269.1_g000023
rosa_roxburghii	Rroxscaffold_5G00358510 Rroxscaffold_6G00397970 Rroxscaffold_7G00172770
rosa_rugosa	Rorug02G0235100
rosa_samantha	Rh2CG306600 Rh2DG342900 Rh4AG104100 Rh4AG115200 Rh4CG112400 Rh5DG113200 Rh6CG362000
rosa_wichuraiana	Rw1G022480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	255, 725
AarI	CACCTGC	1 cut(s)	317
Acc36I	ACCTGC	1 cut(s)	317
AccB1I	GGYRCC	1 cut(s)	1031
AccII	CGCG	1 cut(s)	932
AccIII	TCCGGA	1 cut(s)	856
AciI	CCGC	5 cut(s)	130, 593, 828, 1010, 1183
AclWI	GGATC	5 cut(s)	185, 848, 861, 1007, 1030
AcuI	CTGAAG	2 cut(s)	306, 492
AcyI	GRCGYC	1 cut(s)	1032
AfaI	GTAC	5 cut(s)	513, 750, 754, 902, 1257
AfiI	CCNNNNNNNGG	1 cut(s)	872
AgsI	TTSAA	4 cut(s)	398, 434, 471, 646
AjiI	CACGTC	1 cut(s)	717
AjnI	CCWGG	2 cut(s)	759, 865
AjuI	GAANNNNNNNTTGG	2 cut(s)	490, 522
AleI	CACNNNNGTG	1 cut(s)	974
AluBI	AGCT	8 cut(s)	41, 59, 143, 200, 290, 560, 1237, 1405
AluI	AGCT	8 cut(s)	41, 59, 143, 200, 290, 560, 1237, 1405
Alw21I	GWGCWC	2 cut(s)	316, 1239
Alw26I	GTCTC	2 cut(s)	810, 910
AlwI	GGATC	5 cut(s)	185, 848, 861, 1007, 1030
Ama87I	CYCGRG	2 cut(s)	12, 293
Aor13HI	TCCGGA	1 cut(s)	856
AoxI	GGCC	1 cut(s)	624
ApeKI	GCWGC	1 cut(s)	1073
AspLEI	GCGC	1 cut(s)	1034
AspS9I	GGNCC	1 cut(s)	1272
AsuC2I	CCSGG	2 cut(s)	294, 295
AsuHPI	GGTGA	3 cut(s)	430, 668, 1160
AvaI	CYCGRG	2 cut(s)	12, 293
AvaII	GGWCC	1 cut(s)	1272
BaeI	ACNNNNGTAYC	4 cut(s)	495, 528, 1247, 1280
BamHI	GGATCC	1 cut(s)	853
BanI	GGYRCC	1 cut(s)	1031
BanII	GRGCYC	4 cut(s)	13, 848, 1091, 1239
BauI	CACGAG	1 cut(s)	315
BbsI	GAAGAC	1 cut(s)	465
Bbv12I	GWGCWC	2 cut(s)	316, 1239
BbvI	GCAGC	1 cut(s)	1085
BccI	CCATC	8 cut(s)	173, 254, 296, 471, 526, 580, 1072, 1094
BciT130I	CCWGG	2 cut(s)	761, 867
BciVI	GTATCC	1 cut(s)	1097
BcnI	CCSGG	2 cut(s)	294, 295
BcoDI	GTCTC	2 cut(s)	810, 910
BfaI	CTAG	5 cut(s)	60, 584, 669, 897, 1406
BfoI	RGCGCY	1 cut(s)	1035
BfuAI	ACCTGC	1 cut(s)	317
BfuI	GTATCC	1 cut(s)	1097
BglI	GCCNNNNNGGC	1 cut(s)	843
BisI	GCNGC	1 cut(s)	1074
BlsI	GCNGC	1 cut(s)	1075
Bme1390I	CCNGG	4 cut(s)	294, 295, 761, 867
Bme18I	GGWCC	1 cut(s)	1272
BmeT110I	CYCGRG	2 cut(s)	12, 293
BmgBI	CACGTC	1 cut(s)	717
BmgT120I	GGNCC	1 cut(s)	1272
BmiI	GGNNCC	4 cut(s)	855, 864, 1033, 1318
BmrFI	CCNGG	4 cut(s)	294, 295, 761, 867
BmsI	GCATC	2 cut(s)	271, 352
BpiI	GAAGAC	1 cut(s)	465
BplI	GAGNNNNNCTC	2 cut(s)	1221, 1253
BpuEI	CTTGAG	3 cut(s)	904, 1077, 1223
BpuMI	CCSGG	2 cut(s)	294, 295
Bsa29I	ATCGAT	1 cut(s)	1160
BsaAI	YACGTR	1 cut(s)	752
BsaBI	GATNNNNATC	1 cut(s)	189
BsaHI	GRCGYC	1 cut(s)	1032
BsaI	GGTCTC	1 cut(s)	810
BsaJI	CCNNGG	2 cut(s)	293, 1018
BsaWI	WCCGGW	2 cut(s)	19, 856
BsaXI	ACNNNNNCTCC	2 cut(s)	80, 110
Bsc4I	CCNNNNNNNGG	1 cut(s)	872
Bse118I	RCCGGY	1 cut(s)	1034
Bse1I	ACTGG	1 cut(s)	406
Bse8I	GATNNNNATC	1 cut(s)	189
BseAI	TCCGGA	1 cut(s)	856
BseBI	CCWGG	2 cut(s)	761, 867
BseCI	ATCGAT	1 cut(s)	1160
BseDI	CCNNGG	2 cut(s)	293, 1018
BseGI	GGATG	3 cut(s)	160, 235, 572
BseJI	GATNNNNATC	1 cut(s)	189
BseLI	CCNNNNNNNGG	1 cut(s)	872
BseNI	ACTGG	1 cut(s)	406
BseRI	GAGGAG	3 cut(s)	101, 716, 1319
BseXI	GCAGC	1 cut(s)	1085
BsgI	GTGCAG	1 cut(s)	513
Bsh1236I	CGCG	1 cut(s)	932
Bsh1285I	CGRYCG	2 cut(s)	953, 1164
BshFI	GGCC	1 cut(s)	626
BshNI	GGYRCC	1 cut(s)	1031
BshVI	ATCGAT	1 cut(s)	1160
BsiEI	CGRYCG	2 cut(s)	953, 1164
BsiHKAI	GWGCWC	2 cut(s)	316, 1239
BsiHKCI	CYCGRG	2 cut(s)	12, 293
BsiSI	CCGG	5 cut(s)	20, 294, 838, 857, 1035
BslFI	GGGAC	1 cut(s)	1374
BslI	CCNNNNNNNGG	1 cut(s)	872
BsmAI	GTCTC	2 cut(s)	810, 910
BsmBI	CGTCTC	1 cut(s)	910
BsmFI	GGGAC	1 cut(s)	1374
BsnI	GGCC	1 cut(s)	626
Bso31I	GGTCTC	1 cut(s)	810
BsoBI	CYCGRG	2 cut(s)	12, 293
Bsp1286I	GDGCHC	5 cut(s)	13, 316, 848, 1091, 1239
Bsp13I	TCCGGA	1 cut(s)	856
Bsp143I	GATC	7 cut(s)	190, 738, 853, 950, 999, 1022, 1161
Bsp19I	CCATGG	1 cut(s)	1018
BspACI	CCGC	5 cut(s)	130, 593, 828, 1010, 1183
BspANI	GGCC	1 cut(s)	626
BspDI	ATCGAT	1 cut(s)	1160
BspEI	TCCGGA	1 cut(s)	856
BspFNI	CGCG	1 cut(s)	932
BspLI	GGNNCC	4 cut(s)	855, 864, 1033, 1318
BspMI	ACCTGC	1 cut(s)	317
BspPI	GGATC	5 cut(s)	185, 848, 861, 1007, 1030
BspT107I	GGYRCC	1 cut(s)	1031
BspTNI	GGTCTC	1 cut(s)	810
BsrFI	RCCGGY	1 cut(s)	1034
BsrI	ACTGG	1 cut(s)	406
BssAI	RCCGGY	1 cut(s)	1034
BssECI	CCNNGG	2 cut(s)	293, 1018
BssMI	GATC	7 cut(s)	190, 738, 853, 950, 999, 1022, 1161
BssNI	GRCGYC	1 cut(s)	1032
BssSI	CACGAG	1 cut(s)	315
BssT1I	CCWWGG	1 cut(s)	1018
Bst2BI	CACGAG	1 cut(s)	315
Bst2UI	CCWGG	2 cut(s)	761, 867
Bst4CI	ACNGT	2 cut(s)	224, 656
Bst6I	CTCTTC	7 cut(s)	59, 444, 647, 813, 886, 913, 1289
BstACI	GRCGYC	1 cut(s)	1032
BstAPI	GCANNNNNTGC	1 cut(s)	275
BstBAI	YACGTR	1 cut(s)	752
BstC8I	GCNNGC	1 cut(s)	1235
BstDEI	CTNAG	2 cut(s)	1131, 1334
BstDSI	CCRYGG	1 cut(s)	1018
BstF5I	GGATG	3 cut(s)	160, 235, 572
BstFNI	CGCG	1 cut(s)	932
BstH2I	RGCGCY	1 cut(s)	1035
BstHHI	GCGC	1 cut(s)	1034
BstKTI	GATC	7 cut(s)	193, 741, 856, 953, 1002, 1025, 1164
BstMAI	GTCTC	2 cut(s)	810, 910
BstMBI	GATC	7 cut(s)	190, 738, 853, 950, 999, 1022, 1161
BstMCI	CGRYCG	2 cut(s)	953, 1164
BstMWI	GCNNNNNNNGC	7 cut(s)	275, 825, 834, 843, 1038, 1079, 1234
BstNI	CCWGG	2 cut(s)	761, 867
BstSCI	CCNGG	4 cut(s)	292, 293, 759, 865
BstSNI	TACGTA	1 cut(s)	752
BstUI	CGCG	1 cut(s)	932
BstV1I	GCAGC	1 cut(s)	1085
BstV2I	GAAGAC	1 cut(s)	465
BstX2I	RGATCY	1 cut(s)	853
BstYI	RGATCY	1 cut(s)	853
Bsu15I	ATCGAT	1 cut(s)	1160
BsuI	GTATCC	1 cut(s)	1097
BsuRI	GGCC	1 cut(s)	626
BsuTUI	ATCGAT	1 cut(s)	1160
BtgI	CCRYGG	1 cut(s)	1018
BtgZI	GCGATG	1 cut(s)	1091
BtrI	CACGTC	1 cut(s)	717
BtsCI	GGATG	3 cut(s)	160, 235, 572
BveI	ACCTGC	1 cut(s)	317
Cac8I	GCNNGC	1 cut(s)	1235
CfoI	GCGC	1 cut(s)	1034
Cfr10I	RCCGGY	1 cut(s)	1034
Cfr13I	GGNCC	1 cut(s)	1272
Cfr9I	CCCGGG	1 cut(s)	293
ClaI	ATCGAT	1 cut(s)	1160
CseI	GACGC	1 cut(s)	938
Csp6I	GTAC	5 cut(s)	512, 749, 753, 901, 1256
CviAII	CATG	6 cut(s)	736, 769, 1003, 1019, 1145, 1398
CviQI	GTAC	5 cut(s)	512, 749, 753, 901, 1256
DdeI	CTNAG	2 cut(s)	1131, 1334
DinI	GGCGCC	1 cut(s)	1033
DpnI	GATC	7 cut(s)	192, 740, 855, 952, 1001, 1024, 1163
DpnII	GATC	7 cut(s)	190, 738, 853, 950, 999, 1022, 1161
Eam1104I	CTCTTC	7 cut(s)	59, 444, 647, 813, 886, 913, 1289
EarI	CTCTTC	7 cut(s)	59, 444, 647, 813, 886, 913, 1289
EciI	GGCGGA	1 cut(s)	1198
Ecl136II	GAGCTC	1 cut(s)	1237
Eco105I	TACGTA	1 cut(s)	752
Eco130I	CCWWGG	1 cut(s)	1018
Eco147I	AGGCCT	1 cut(s)	626
Eco24I	GRGCYC	4 cut(s)	13, 848, 1091, 1239
Eco31I	GGTCTC	1 cut(s)	810
Eco47I	GGWCC	1 cut(s)	1272
Eco53kI	GAGCTC	1 cut(s)	1237
Eco57I	CTGAAG	2 cut(s)	306, 492
Eco88I	CYCGRG	2 cut(s)	12, 293
EcoICRI	GAGCTC	1 cut(s)	1237
EcoRII	CCWGG	2 cut(s)	759, 865
EcoT14I	CCWWGG	1 cut(s)	1018
EcoT38I	GRGCYC	4 cut(s)	13, 848, 1091, 1239
EgeI	GGCGCC	1 cut(s)	1033
EheI	GGCGCC	1 cut(s)	1033
ErhI	CCWWGG	1 cut(s)	1018
Esp3I	CGTCTC	1 cut(s)	910
FaeI	CATG	6 cut(s)	739, 772, 1006, 1022, 1148, 1401
FalI	AAGNNNNNCTT	2 cut(s)	450, 482
FaqI	GGGAC	1 cut(s)	1374
FatI	CATG	6 cut(s)	735, 768, 1002, 1018, 1144, 1397
FauI	CCCGC	1 cut(s)	821
Fnu4HI	GCNGC	1 cut(s)	1074
FokI	GGATG	3 cut(s)	167, 242, 559
FriOI	GRGCYC	4 cut(s)	13, 848, 1091, 1239
Fsp4HI	GCNGC	1 cut(s)	1074
FspBI	CTAG	5 cut(s)	60, 584, 669, 897, 1406
GlaI	GCGC	1 cut(s)	1033
GluI	GCNGC	1 cut(s)	1074
HaeII	RGCGCY	1 cut(s)	1035
HaeIII	GGCC	1 cut(s)	626
HapII	CCGG	5 cut(s)	20, 294, 838, 857, 1035
HgaI	GACGC	1 cut(s)	938
HhaI	GCGC	1 cut(s)	1034
Hin1I	GRCGYC	1 cut(s)	1032
Hin1II	CATG	6 cut(s)	739, 772, 1006, 1022, 1148, 1401
Hin6I	GCGC	1 cut(s)	1032
HinP1I	GCGC	1 cut(s)	1032
HinfI	GANTC	3 cut(s)	89, 236, 1248
HpaII	CCGG	5 cut(s)	20, 294, 838, 857, 1035
HphI	GGTGA	3 cut(s)	430, 668, 1160
Hpy166II	GTNNAC	1 cut(s)	1062
Hpy188I	TCNGA	4 cut(s)	178, 241, 999, 1174
Hpy188III	TCNNGA	3 cut(s)	14, 194, 857
Hpy8I	GTNNAC	1 cut(s)	1062
Hpy99I	CGWCG	4 cut(s)	932, 965, 968, 1280
HpyAV	CCTTC	2 cut(s)	546, 766
HpyCH4III	ACNGT	2 cut(s)	224, 656
HpyCH4IV	ACGT	4 cut(s)	598, 716, 751, 903
HpyCH4V	TGCA	4 cut(s)	326, 365, 530, 1073
HpyF10VI	GCNNNNNNNGC	7 cut(s)	275, 825, 834, 843, 1038, 1079, 1234
HpyF3I	CTNAG	2 cut(s)	1131, 1334
HpySE526I	ACGT	4 cut(s)	598, 716, 751, 903
Hsp92I	GRCGYC	1 cut(s)	1032
Hsp92II	CATG	6 cut(s)	739, 772, 1006, 1022, 1148, 1401
HspAI	GCGC	1 cut(s)	1032
KasI	GGCGCC	1 cut(s)	1031
Kpn2I	TCCGGA	1 cut(s)	856
Kzo9I	GATC	7 cut(s)	190, 738, 853, 950, 999, 1022, 1161
LmnI	GCTCC	4 cut(s)	56, 295, 565, 979
Lsp1109I	GCAGC	1 cut(s)	1085
LweI	GCATC	2 cut(s)	271, 352
MaeI	CTAG	5 cut(s)	60, 584, 669, 897, 1406
MaeII	ACGT	4 cut(s)	598, 716, 751, 903
MaeIII	GTNAC	2 cut(s)	370, 712
MalI	GATC	7 cut(s)	192, 740, 855, 952, 1001, 1024, 1163
MboI	GATC	7 cut(s)	190, 738, 853, 950, 999, 1022, 1161
MfeI	CAATTG	1 cut(s)	434
MflI	RGATCY	1 cut(s)	853
MhlI	GDGCHC	5 cut(s)	13, 316, 848, 1091, 1239
MluCI	AATT	6 cut(s)	137, 349, 379, 434, 479, 813
Mly113I	GGCGCC	1 cut(s)	1032
MlyI	GAGTC	2 cut(s)	98, 1257
MmeI	TCCRAC	2 cut(s)	687, 977
MroI	TCCGGA	1 cut(s)	856
MseI	TTAA	3 cut(s)	333, 686, 744
MslI	CAYNNNNRTG	2 cut(s)	974, 1384
MspA1I	CMGCKG	1 cut(s)	828
MspI	CCGG	5 cut(s)	20, 294, 838, 857, 1035
MspR9I	CCNGG	4 cut(s)	294, 295, 761, 867
MunI	CAATTG	1 cut(s)	434
MvaI	CCWGG	2 cut(s)	761, 867
MvnI	CGCG	1 cut(s)	932
MwoI	GCNNNNNNNGC	7 cut(s)	275, 825, 834, 843, 1038, 1079, 1234
NarI	GGCGCC	1 cut(s)	1032
NciI	CCSGG	2 cut(s)	294, 295
NcoI	CCATGG	1 cut(s)	1018
NdeII	GATC	7 cut(s)	190, 738, 853, 950, 999, 1022, 1161
NlaIII	CATG	6 cut(s)	739, 772, 1006, 1022, 1148, 1401
NlaIV	GGNNCC	4 cut(s)	855, 864, 1033, 1318
NmuCI	GTSAC	1 cut(s)	712
OliI	CACNNNNGTG	1 cut(s)	974
PaeR7I	CTCGAG	1 cut(s)	12
PaqCI	CACCTGC	1 cut(s)	317
PceI	AGGCCT	1 cut(s)	626
PcsI	WCGNNNNNNNCGW	1 cut(s)	240
PfeI	GAWTC	1 cut(s)	236
PkrI	GCNGC	1 cut(s)	1075
Ple19I	CGATCG	2 cut(s)	953, 1164
PleI	GAGTC	2 cut(s)	97, 1256
PluTI	GGCGCC	1 cut(s)	1035
PpsI	GAGTC	2 cut(s)	97, 1256
Ppu21I	YACGTR	1 cut(s)	752
PsiI	TTATAA	2 cut(s)	255, 725
Psp124BI	GAGCTC	1 cut(s)	1239
Psp6I	CCWGG	2 cut(s)	759, 865
PspGI	CCWGG	2 cut(s)	759, 865
PspN4I	GGNNCC	4 cut(s)	855, 864, 1033, 1318
PspPI	GGNCC	1 cut(s)	1272
PsuI	RGATCY	1 cut(s)	853
PvuI	CGATCG	2 cut(s)	953, 1164
RsaI	GTAC	5 cut(s)	513, 750, 754, 902, 1257
RsaNI	GTAC	5 cut(s)	512, 749, 753, 901, 1256
RseI	CAYNNNNRTG	2 cut(s)	974, 1384
SacI	GAGCTC	1 cut(s)	1239
SaqAI	TTAA	3 cut(s)	333, 686, 744
SatI	GCNGC	1 cut(s)	1074
Sau3AI	GATC	7 cut(s)	190, 738, 853, 950, 999, 1022, 1161
Sau96I	GGNCC	1 cut(s)	1272
SchI	GAGTC	2 cut(s)	98, 1257
ScrFI	CCNGG	4 cut(s)	294, 295, 761, 867
SduI	GDGCHC	5 cut(s)	13, 316, 848, 1091, 1239
SfaNI	GCATC	2 cut(s)	271, 352
SfoI	GGCGCC	1 cut(s)	1033
Sfr274I	CTCGAG	1 cut(s)	12
SinI	GGWCC	1 cut(s)	1272
SlaI	CTCGAG	1 cut(s)	12
SmaI	CCCGGG	1 cut(s)	295
SmiMI	CAYNNNNRTG	2 cut(s)	974, 1384
SmlI	CTYRAG	4 cut(s)	12, 919, 1092, 1238
SmoI	CTYRAG	4 cut(s)	12, 919, 1092, 1238
SnaBI	TACGTA	1 cut(s)	752
Sse9I	AATT	6 cut(s)	137, 349, 379, 434, 479, 813
SseBI	AGGCCT	1 cut(s)	626
SsiI	CCGC	5 cut(s)	130, 593, 828, 1010, 1183
SspDI	GGCGCC	1 cut(s)	1031
SspI	AATATT	1 cut(s)	430
SspMI	CTAG	5 cut(s)	60, 584, 669, 897, 1406
SstI	GAGCTC	1 cut(s)	1239
StuI	AGGCCT	1 cut(s)	626
StyD4I	CCNGG	4 cut(s)	292, 293, 759, 865
StyI	CCWWGG	1 cut(s)	1018
TaaI	ACNGT	2 cut(s)	224, 656
TaiI	ACGT	4 cut(s)	601, 719, 754, 906
TaqI	TCGA	5 cut(s)	13, 48, 774, 960, 1160
TasI	AATT	6 cut(s)	137, 349, 379, 434, 479, 813
TfiI	GAWTC	1 cut(s)	236
Tru1I	TTAA	3 cut(s)	333, 686, 744
Tru9I	TTAA	3 cut(s)	333, 686, 744
TseFI	GTSAC	1 cut(s)	712
TseI	GCWGC	1 cut(s)	1073
Tsp45I	GTSAC	1 cut(s)	712
TspDTI	ATGAA	4 cut(s)	47, 117, 437, 873
TspGWI	ACGGA	3 cut(s)	167, 1079, 1264
TspMI	CCCGGG	1 cut(s)	293
VpaK11BI	GGWCC	1 cut(s)	1272
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1025
XhoI	CTCGAG	1 cut(s)	12
XmaI	CCCGGG	1 cut(s)	293
XspI	CTAG	5 cut(s)	60, 584, 669, 897, 1406

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.