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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g21022 FvH4_4g33231 |
| pyrus_communis | pycom16g21430 pycom16g26140 |
| rosa_laevigata | RLG00000032953 |
| rosa_multiflora | Rmu_sc0006269.1_g000023 |
| rosa_roxburghii | Rroxscaffold_5G00358510 Rroxscaffold_6G00397970 Rroxscaffold_7G00172770 |
| rosa_rugosa | Rorug02G0235100 |
| rosa_samantha | Rh2CG306600 Rh2DG342900 Rh4AG104100 Rh4AG115200 Rh4CG112400 Rh5DG113200 Rh6CG362000 |
| rosa_wichuraiana | Rw1G022480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 360 |
| AciI | CCGC | 1 cut(s) | 121 |
| AclWI | GGATC | 1 cut(s) | 525 |
| AcuI | CTGAAG | 1 cut(s) | 411 |
| AfaI | GTAC | 2 cut(s) | 128, 370 |
| AflIII | ACRYGT | 1 cut(s) | 32 |
| AgsI | TTSAA | 2 cut(s) | 539, 576 |
| AluBI | AGCT | 3 cut(s) | 164, 248, 395 |
| AluI | AGCT | 3 cut(s) | 164, 248, 395 |
| Alw26I | GTCTC | 1 cut(s) | 282 |
| AlwI | GGATC | 1 cut(s) | 525 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 70, 102 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 104 |
| AsuHPI | GGTGA | 2 cut(s) | 218, 458 |
| BauI | CACGAG | 1 cut(s) | 420 |
| BbsI | GAAGAC | 1 cut(s) | 570 |
| BccI | CCATC | 5 cut(s) | 278, 359, 401, 437, 576 |
| BcoDI | GTCTC | 1 cut(s) | 282 |
| BfaI | CTAG | 2 cut(s) | 165, 521 |
| BmiI | GGNNCC | 1 cut(s) | 639 |
| BmsI | GCATC | 2 cut(s) | 376, 457 |
| BpiI | GAAGAC | 1 cut(s) | 570 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 185, 215, 629, 659 |
| BseGI | GGATG | 3 cut(s) | 265, 295, 340 |
| BseMII | CTCAG | 1 cut(s) | 154 |
| BseRI | GAGGAG | 1 cut(s) | 206 |
| BsmAI | GTCTC | 1 cut(s) | 282 |
| Bsp143I | GATC | 2 cut(s) | 136, 517 |
| BspACI | CCGC | 1 cut(s) | 121 |
| BspCNI | CTCAG | 1 cut(s) | 153 |
| BspLI | GGNNCC | 1 cut(s) | 639 |
| BspPI | GGATC | 1 cut(s) | 525 |
| BssMI | GATC | 2 cut(s) | 136, 517 |
| BssSI | CACGAG | 1 cut(s) | 420 |
| Bst2BI | CACGAG | 1 cut(s) | 420 |
| Bst4CI | ACNGT | 3 cut(s) | 27, 266, 329 |
| Bst6I | CTCTTC | 2 cut(s) | 164, 549 |
| BstC8I | GCNNGC | 3 cut(s) | 115, 119, 123 |
| BstDEI | CTNAG | 1 cut(s) | 140 |
| BstF5I | GGATG | 3 cut(s) | 265, 295, 340 |
| BstKTI | GATC | 2 cut(s) | 139, 520 |
| BstMAI | GTCTC | 1 cut(s) | 282 |
| BstMBI | GATC | 2 cut(s) | 136, 517 |
| BstNSI | RCATGY | 3 cut(s) | 36, 117, 435 |
| BstV2I | GAAGAC | 1 cut(s) | 570 |
| BstX2I | RGATCY | 1 cut(s) | 517 |
| BstYI | RGATCY | 1 cut(s) | 517 |
| BtsCI | GGATG | 3 cut(s) | 265, 295, 340 |
| BtsIMutI | CAGTG | 2 cut(s) | 271, 334 |
| Cac8I | GCNNGC | 3 cut(s) | 115, 119, 123 |
| CseI | GACGC | 1 cut(s) | 583 |
| Csp6I | GTAC | 2 cut(s) | 127, 369 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 391, 426 |
| CviAII | CATG | 4 cut(s) | 33, 69, 114, 432 |
| CviJI | RGCY | 4 cut(s) | 164, 248, 395, 640 |
| CviKI_1 | RGCY | 4 cut(s) | 164, 248, 395, 640 |
| CviQI | GTAC | 2 cut(s) | 127, 369 |
| DdeI | CTNAG | 1 cut(s) | 140 |
| DpnI | GATC | 2 cut(s) | 138, 519 |
| DpnII | GATC | 2 cut(s) | 136, 517 |
| Eam1104I | CTCTTC | 2 cut(s) | 164, 549 |
| EarI | CTCTTC | 2 cut(s) | 164, 549 |
| Eco57I | CTGAAG | 1 cut(s) | 411 |
| EcoT22I | ATGCAT | 1 cut(s) | 433 |
| FaeI | CATG | 4 cut(s) | 36, 72, 117, 435 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 555, 587 |
| FatI | CATG | 4 cut(s) | 32, 68, 113, 431 |
| FauI | CCCGC | 1 cut(s) | 114 |
| FokI | GGATG | 3 cut(s) | 272, 282, 347 |
| FspBI | CTAG | 2 cut(s) | 165, 521 |
| HgaI | GACGC | 1 cut(s) | 583 |
| Hin1II | CATG | 4 cut(s) | 36, 72, 117, 435 |
| HinfI | GANTC | 3 cut(s) | 45, 341, 602 |
| HphI | GGTGA | 2 cut(s) | 218, 458 |
| Hpy166II | GTNNAC | 1 cut(s) | 30 |
| Hpy188I | TCNGA | 3 cut(s) | 283, 346, 607 |
| Hpy188III | TCNNGA | 1 cut(s) | 299 |
| Hpy8I | GTNNAC | 1 cut(s) | 30 |
| HpyCH4III | ACNGT | 3 cut(s) | 27, 266, 329 |
| HpyCH4V | TGCA | 5 cut(s) | 76, 113, 117, 431, 470 |
| HpyF3I | CTNAG | 1 cut(s) | 140 |
| Hsp92II | CATG | 4 cut(s) | 36, 72, 117, 435 |
| Kzo9I | GATC | 2 cut(s) | 136, 517 |
| LmnI | GCTCC | 2 cut(s) | 161, 637 |
| LpnPI | CCDG | 4 cut(s) | 74, 123, 312, 654 |
| LweI | GCATC | 2 cut(s) | 376, 457 |
| MaeI | CTAG | 2 cut(s) | 165, 521 |
| MaeIII | GTNAC | 3 cut(s) | 21, 57, 475 |
| MalI | GATC | 2 cut(s) | 138, 519 |
| MboI | GATC | 2 cut(s) | 136, 517 |
| MboII | GAAGA | 6 cut(s) | 181, 221, 557, 566, 572, 575 |
| MfeI | CAATTG | 1 cut(s) | 539 |
| MflI | RGATCY | 1 cut(s) | 517 |
| MnlI | CCTC | 3 cut(s) | 76, 184, 550 |
| Mph1103I | ATGCAT | 1 cut(s) | 433 |
| MroXI | GAANNNNTTC | 1 cut(s) | 104 |
| MseI | TTAA | 3 cut(s) | 131, 438, 587 |
| MunI | CAATTG | 1 cut(s) | 539 |
| NdeII | GATC | 2 cut(s) | 136, 517 |
| NlaIII | CATG | 4 cut(s) | 36, 72, 117, 435 |
| NlaIV | GGNNCC | 1 cut(s) | 639 |
| NsiI | ATGCAT | 1 cut(s) | 433 |
| NspI | RCATGY | 3 cut(s) | 36, 117, 435 |
| PaeI | GCATGC | 1 cut(s) | 117 |
| PciI | ACATGT | 1 cut(s) | 32 |
| PdmI | GAANNNNTTC | 1 cut(s) | 104 |
| PfeI | GAWTC | 3 cut(s) | 45, 341, 602 |
| PscI | ACATGT | 1 cut(s) | 32 |
| PsiI | TTATAA | 1 cut(s) | 360 |
| PspN4I | GGNNCC | 1 cut(s) | 639 |
| PsuI | RGATCY | 1 cut(s) | 517 |
| RsaI | GTAC | 2 cut(s) | 128, 370 |
| RsaNI | GTAC | 2 cut(s) | 127, 369 |
| SaqAI | TTAA | 3 cut(s) | 131, 438, 587 |
| Sau3AI | GATC | 2 cut(s) | 136, 517 |
| SetI | ASST | 4 cut(s) | 166, 208, 250, 397 |
| SfaNI | GCATC | 2 cut(s) | 376, 457 |
| SphI | GCATGC | 1 cut(s) | 117 |
| SsiI | CCGC | 1 cut(s) | 121 |
| SspI | AATATT | 1 cut(s) | 535 |
| SspMI | CTAG | 2 cut(s) | 165, 521 |
| TaaI | ACNGT | 3 cut(s) | 27, 266, 329 |
| TfiI | GAWTC | 3 cut(s) | 45, 341, 602 |
| Tru1I | TTAA | 3 cut(s) | 131, 438, 587 |
| Tru9I | TTAA | 3 cut(s) | 131, 438, 587 |
| TscAI | CASTG | 2 cut(s) | 271, 334 |
| TspDTI | ATGAA | 1 cut(s) | 542 |
| TspGWI | ACGGA | 1 cut(s) | 587 |
| TspRI | CASTG | 2 cut(s) | 271, 334 |
| XceI | RCATGY | 3 cut(s) | 36, 117, 435 |
| XmnI | GAANNNNTTC | 1 cut(s) | 104 |
| XspI | CTAG | 2 cut(s) | 165, 521 |
| Zsp2I | ATGCAT | 1 cut(s) | 433 |