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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g21022 FvH4_4g33231 |
| pyrus_communis | pycom16g21430 pycom16g26140 |
| rosa_laevigata | RLG00000032953 |
| rosa_multiflora | Rmu_sc0006269.1_g000023 |
| rosa_roxburghii | Rroxscaffold_5G00358510 Rroxscaffold_6G00397970 Rroxscaffold_7G00172770 |
| rosa_rugosa | Rorug02G0235100 |
| rosa_samantha | Rh2CG306600 Rh2DG342900 Rh4AG104100 Rh4AG115200 Rh4CG112400 Rh5DG113200 Rh6CG362000 |
| rosa_wichuraiana | Rw1G022480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 271 |
| AciI | CCGC | 1 cut(s) | 393 |
| AcuI | CTGAAG | 1 cut(s) | 214 |
| AfaI | GTAC | 1 cut(s) | 249 |
| AgsI | TTSAA | 5 cut(s) | 29, 42, 124, 206, 380 |
| AluBI | AGCT | 2 cut(s) | 112, 295 |
| AluI | AGCT | 2 cut(s) | 112, 295 |
| AoxI | GGCC | 1 cut(s) | 186 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 54 |
| AsuHPI | GGTGA | 1 cut(s) | 309 |
| BanI | GGYRCC | 1 cut(s) | 271 |
| BccI | CCATC | 1 cut(s) | 123 |
| BciVI | GTATCC | 1 cut(s) | 190 |
| BclI | TGATCA | 2 cut(s) | 91, 361 |
| BfuI | GTATCC | 1 cut(s) | 190 |
| BmiI | GGNNCC | 1 cut(s) | 273 |
| BmrI | ACTGGG | 2 cut(s) | 202, 334 |
| BmuI | ACTGGG | 2 cut(s) | 202, 334 |
| BsaWI | WCCGGW | 1 cut(s) | 176 |
| Bse1I | ACTGG | 2 cut(s) | 197, 329 |
| BseGI | GGATG | 2 cut(s) | 138, 163 |
| BseMII | CTCAG | 2 cut(s) | 174, 333 |
| BseNI | ACTGG | 2 cut(s) | 197, 329 |
| BshFI | GGCC | 1 cut(s) | 188 |
| BshNI | GGYRCC | 1 cut(s) | 271 |
| BsiSI | CCGG | 1 cut(s) | 177 |
| BsnI | GGCC | 1 cut(s) | 188 |
| Bsp143I | GATC | 3 cut(s) | 91, 345, 361 |
| BspACI | CCGC | 1 cut(s) | 393 |
| BspANI | GGCC | 1 cut(s) | 188 |
| BspCNI | CTCAG | 2 cut(s) | 175, 334 |
| BspHI | TCATGA | 1 cut(s) | 286 |
| BspLI | GGNNCC | 1 cut(s) | 273 |
| BspT107I | GGYRCC | 1 cut(s) | 271 |
| BsrI | ACTGG | 2 cut(s) | 197, 329 |
| BssMI | GATC | 3 cut(s) | 91, 345, 361 |
| Bst4CI | ACNGT | 2 cut(s) | 119, 202 |
| BstDEI | CTNAG | 2 cut(s) | 183, 342 |
| BstF5I | GGATG | 2 cut(s) | 138, 163 |
| BstKTI | GATC | 3 cut(s) | 94, 348, 364 |
| BstMBI | GATC | 3 cut(s) | 91, 345, 361 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 169, 258 |
| BstNSI | RCATGY | 1 cut(s) | 393 |
| BsuI | GTATCC | 1 cut(s) | 190 |
| BsuRI | GGCC | 1 cut(s) | 188 |
| BtsCI | GGATG | 2 cut(s) | 138, 163 |
| BtsIMutI | CAGTG | 2 cut(s) | 238, 339 |
| CciI | TCATGA | 1 cut(s) | 286 |
| Csp6I | GTAC | 1 cut(s) | 248 |
| CviAII | CATG | 3 cut(s) | 287, 349, 390 |
| CviJI | RGCY | 4 cut(s) | 112, 163, 188, 295 |
| CviKI_1 | RGCY | 4 cut(s) | 112, 163, 188, 295 |
| CviQI | GTAC | 1 cut(s) | 248 |
| DdeI | CTNAG | 2 cut(s) | 183, 342 |
| DpnI | GATC | 3 cut(s) | 93, 347, 363 |
| DpnII | GATC | 3 cut(s) | 91, 345, 361 |
| Eco147I | AGGCCT | 1 cut(s) | 188 |
| Eco57I | CTGAAG | 1 cut(s) | 214 |
| FaeI | CATG | 3 cut(s) | 290, 352, 393 |
| FaiI | YATR | 6 cut(s) | 264, 266, 288, 333, 350, 391 |
| FatI | CATG | 3 cut(s) | 286, 348, 389 |
| FbaI | TGATCA | 2 cut(s) | 91, 361 |
| FokI | GGATG | 2 cut(s) | 145, 170 |
| HaeIII | GGCC | 1 cut(s) | 188 |
| HapII | CCGG | 1 cut(s) | 177 |
| Hin1II | CATG | 3 cut(s) | 290, 352, 393 |
| HincII | GTYRAC | 2 cut(s) | 223, 387 |
| HindII | GTYRAC | 2 cut(s) | 223, 387 |
| HinfI | GANTC | 1 cut(s) | 5 |
| HpaII | CCGG | 1 cut(s) | 177 |
| HphI | GGTGA | 1 cut(s) | 309 |
| Hpy166II | GTNNAC | 2 cut(s) | 223, 387 |
| Hpy188I | TCNGA | 1 cut(s) | 184 |
| Hpy188III | TCNNGA | 1 cut(s) | 287 |
| Hpy8I | GTNNAC | 2 cut(s) | 223, 387 |
| HpyAV | CCTTC | 2 cut(s) | 108, 285 |
| HpyCH4III | ACNGT | 2 cut(s) | 119, 202 |
| HpyCH4IV | ACGT | 1 cut(s) | 24 |
| HpyCH4V | TGCA | 1 cut(s) | 172 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 169, 258 |
| HpyF3I | CTNAG | 2 cut(s) | 183, 342 |
| HpySE526I | ACGT | 1 cut(s) | 24 |
| Hsp92II | CATG | 3 cut(s) | 290, 352, 393 |
| Ksp22I | TGATCA | 2 cut(s) | 91, 361 |
| Kzo9I | GATC | 3 cut(s) | 91, 345, 361 |
| LpnPI | CCDG | 5 cut(s) | 178, 190, 305, 310, 352 |
| MaeII | ACGT | 1 cut(s) | 24 |
| MalI | GATC | 3 cut(s) | 93, 347, 363 |
| MboI | GATC | 3 cut(s) | 91, 345, 361 |
| MboII | GAAGA | 3 cut(s) | 152, 161, 382 |
| MluCI | AATT | 2 cut(s) | 29, 143 |
| MnlI | CCTC | 4 cut(s) | 73, 178, 211, 251 |
| MroXI | GAANNNNTTC | 1 cut(s) | 54 |
| MseI | TTAA | 1 cut(s) | 108 |
| MspI | CCGG | 1 cut(s) | 177 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 169, 258 |
| NdeII | GATC | 3 cut(s) | 91, 345, 361 |
| NlaIII | CATG | 3 cut(s) | 290, 352, 393 |
| NlaIV | GGNNCC | 1 cut(s) | 273 |
| NspI | RCATGY | 1 cut(s) | 393 |
| PagI | TCATGA | 1 cut(s) | 286 |
| PceI | AGGCCT | 1 cut(s) | 188 |
| PdmI | GAANNNNTTC | 1 cut(s) | 54 |
| PfeI | GAWTC | 1 cut(s) | 5 |
| PspN4I | GGNNCC | 1 cut(s) | 273 |
| RsaI | GTAC | 1 cut(s) | 249 |
| RsaNI | GTAC | 1 cut(s) | 248 |
| SaqAI | TTAA | 1 cut(s) | 108 |
| Sau3AI | GATC | 3 cut(s) | 91, 345, 361 |
| SetI | ASST | 5 cut(s) | 27, 100, 114, 222, 297 |
| Sse9I | AATT | 2 cut(s) | 29, 143 |
| SseBI | AGGCCT | 1 cut(s) | 188 |
| SsiI | CCGC | 1 cut(s) | 393 |
| StuI | AGGCCT | 1 cut(s) | 188 |
| TaaI | ACNGT | 2 cut(s) | 119, 202 |
| TaiI | ACGT | 1 cut(s) | 27 |
| TaqI | TCGA | 1 cut(s) | 114 |
| TasI | AATT | 2 cut(s) | 29, 143 |
| TfiI | GAWTC | 1 cut(s) | 5 |
| Tru1I | TTAA | 1 cut(s) | 108 |
| Tru9I | TTAA | 1 cut(s) | 108 |
| TscAI | CASTG | 2 cut(s) | 238, 346 |
| TspDTI | ATGAA | 2 cut(s) | 23, 348 |
| TspRI | CASTG | 2 cut(s) | 238, 346 |
| XceI | RCATGY | 1 cut(s) | 393 |
| XmnI | GAANNNNTTC | 1 cut(s) | 54 |