pycom17g27990

rRNA processing/ribosome biogenesis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0004705
Physical Location & Seq
Reverse (-)
26046409 .. 26053986
7578 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2604 bp
ATGTACGATGTTGCTCTAAGGCCTCGTCTGTTGCAAACGCTCATCCGAGACCTCCCCGACGATAAACACCCGTCTGGGAGTCCATTGAAGCTGTCGAAGGTAGTCTACGCGATCAAAACCCACAACCTCCTTTGTGAGTCTGTACAAGATGTGACTGACCAACAGCTAATCACTACGTGGAAATCCGCTATTGATTCCTGGGTCCGTCGCTTGGTGCAGCTTGTTTCTAGTGACATGCCAGATAAATGTTGGGAAGGAATTTGTTTGATGGGGGTGACTTGTCGGGAATGCAGCTCTGAGCGGTTCTTGGAATCATACTCTGGTTGGTTCCAGATACTTCTATCACATATTCAGCCCACAACAACTTCTCAATTTGTGAAGGTGGCCTCTTGTGCCTCGATGTCAGATCTCATCACAAGGCTGGGTGGATCTCTAAATGCAAAAAGGGATGGAACTGCACCTGCCGGGAAACTTGTTCAGCAAATTATTCAACCAGTTTTGAAGTTGTTAAATGATGATCATTCAGAGGTTGTTTGGGAAGGAGCAGTTCAATTGTTATGCACAATTATATCTTTCTTTCCATTGAGCATCAATCGTCATTATGACAGTGTTGAAGATGTTATTGCTTCAACAATTTTGTCAGGAAAAGGAAGTGATAACATGCTGAAGAAACTTGCTCATTGCCTGGCATTACTACCAAAGTCAAGAGGGGATGAGGATAGCTGGTCCTTAATGATTCGGAAGATTTTATTGATGATTAACGGTCACCTGAATGATGTTTTCCAGGGGTTTGAGGAAGAAACGAAACGCCATGAAATTATTAGATTATTGATTCCCCAAGGAAAAGATCCCCCTCCTCAGTTGGGAGGAAATAAAGTGTCAGGAAAAGATTCAACAAAGGGAAGAAAGAGTTCTCAGCGTTTGACAATGTCCAGTATCTCTGCACTGATGGTTTGCTGCTCTACAATGATAACAACTTCGTACCCTGTTCAGGTGACTGTTCCTATTCGGTCCTTATTTGCCCTTATTGAGAGAGTGCTGATTGTGGATGGTTCCATCCCACACTCTCTGCTGCCCTTTATGACTGCCACACAGCAAGAGTTTATTTGTTCGGAACTACCACTTCTGCACCTGTATGGTTTAGAGTTCCTCACTGCTATTATAGAGGGCGTGCAAAGTCAACTTTTACCACATGCTGCTTATTTAGTGCATCTTCTTTCAGTGTACTTAAAGAGATGTGCATTGCCAGAATTAAGGATAAGGGTCTACTCAATCACAAGGATTTTGCTGATATCCATGGGTTTTGGCATGACAGTAAGCTTGGCACGGGAGGTTGCTAACAATGCTTTGATTGATCTGAATCCCATTGTGAATGAGAGTGGCGGTGCACCTTCTAGTGGATACTCAAAGCCTTATACTGAAGCATTGCTTCAAACAACACCACAATCTAGCCATAGAAAGAGGAAGCATGGAGATTCAAGCGGATCTCTTGAGTGGCATAAGACTAGTAGTTTGGGAGAGGGGAACCCCAAGAGCCATACGATATCTCCTATTCCTGTGAAAATCGCTGCACTTGAGGCATTAGAAGCTCTTGTGACTGTGGGTGGTGCGTTGAAATCTGAAGGATGGCGATCGGATGTTGGCCTTCTTCTGATGGACATAGCTACAAATTCTATGAAAGGGGGACGTGCTGGTGATAACAAAAACATATATCAGCTGAAGGAACCTGTTGATATCTGGGGTGATTTGCAGCTTGCTGCTCTACGTGCACTTTTGGCATCGTTACTTTCTTCATCTGGTGTCCGCCCCCCTTATTTAGCTGAGGGTCTCGATCTTTTCCGCAGAGGCAAGCAAGAAACTGGAACCAAAGTAGCTGGATTTTGTGCTCATTCTCTTTTGACCTTAGAGGTCCTTATACATCCCAGGGCACTCCCACTGGCAGGTTTCTCGGATGGAGTTAGCCACAAACTCCCAGAAAACATGTACTCTGGTAGTGTAAAGCACCAAACTCCGTTTTCAAGTGACATACAGGGAATGGTGTATGATGCTTCTGATTCAGATTGTGACGACCTATATAATAGCTGGCTTGCAACTGGTAAACAATTAGAAGCTCCGATGAGTGACCTAGACAAGACTCTGCGGGCGGGAGAGCCATCCAAAACTCTAACAGTTCATCAGGATAAAAAACTTGCTGTAGATGGTTCATTTGGAAAAGAGACTCTAGGAGGAAGTGCACAGGAGCTGAAATTATCCATTCAGGATGTGGAGATGAGAGTCAATGGGGATGAAAATATGGTTGAATGCTGCCAAGTTCAAGAATTTGCAGTGCAACTTGAGAATGGTCTGTCTTCAAAAGTTGGAGTTGCTGAAGAAGTCTTTGGGAGGGTTGCTCTAGGAAGTGGTCCATCTGATCAAGCAGGTAGCATTACGGTTGCAAGCCATGATGTTCCGGTGGCTAAAGGTGATGGGTTTCTTGGCAGAGAGAAGAATTCAGCGTCTACTTCAAATCCTGAGAAGGGCAAGGGAATTGCATATGAACTGGGTAATGATTCAGATGCGGATTCATTTCCTGATATTGTGGATCGAGATTCTGATTCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RIX1

Protein Analysis

868

Amino Acids

94.35

Weight (kDa)

5.86

Isoelectric Point (pI)

41.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RIX1 PF08167 14 - 216 1.3e-34 rRNA processing/ribosome biogenesis
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 469
Acc36I ACCTGC 3 cut(s) 469, 1931, 2408
AccBSI CCGCTC 1 cut(s) 301
AccI GTMKAC 3 cut(s) 105, 1266, 2498
AccII CGCG 1 cut(s) 110
AciI CCGC 9 cut(s) 186, 301, 1383, 1482, 1804, 1840, 2140, 2144, 2558
AclWI GGATC 4 cut(s) 436, 842, 1492, 2589
AcsI RAATTY 4 cut(s) 258, 1669, 2318, 2488
AcuI CTGAAG 5 cut(s) 686, 1440, 1641, 1739, 2388
AdeI CACNNNGTG 1 cut(s) 177
AfaI GTAC 5 cut(s) 5, 144, 983, 1226, 1985
AfiI CCNNNNNNNGG 6 cut(s) 211, 863, 991, 1397, 1940, 2516
AflIII ACRYGT 1 cut(s) 1980
AhlI ACTAGT 1 cut(s) 1505
AjiI CACGTC 1 cut(s) 1688
AjnI CCWGG 4 cut(s) 197, 684, 783, 1922
AjuI GAANNNNNNNTTGG 2 cut(s) 2361, 2393
Alw21I GWGCWC 4 cut(s) 1390, 1771, 1888, 2236
Alw26I GTCTC 3 cut(s) 42, 1832, 2210
Alw44I GTGCAC 3 cut(s) 1386, 1767, 2232
AlwI GGATC 4 cut(s) 436, 842, 1492, 2589
AlwNI CAGNNNCTG 1 cut(s) 2242
AoxI GGCC 3 cut(s) 20, 384, 1642
ApaLI GTGCAC 3 cut(s) 1386, 1767, 2232
ApeKI GCWGC 9 cut(s) 217, 291, 957, 1072, 1196, 1568, 1750, 1757, 2304
ApoI RAATTY 4 cut(s) 258, 1669, 2318, 2488
ArsI GACNNNNNNTTYG 2 cut(s) 1495, 1527
Asp700I GAANNNNTTC 2 cut(s) 889, 910
AspS9I GGNCC 5 cut(s) 202, 726, 1011, 1909, 2402
AsuC2I CCSGG 1 cut(s) 466
AsuHPI GGTGA 6 cut(s) 286, 758, 1006, 1706, 1754, 2474
AvaII GGWCC 5 cut(s) 202, 726, 1011, 1909, 2402
BaeGI GKGCMC 4 cut(s) 1390, 1771, 1930, 2236
BarI GAAGNNNNNNTAC 2 cut(s) 89, 121
BbsI GAAGAC 1 cut(s) 2340
Bbv12I GWGCWC 4 cut(s) 1390, 1771, 1888, 2236
BbvCI CCTCAGC 1 cut(s) 1821
BbvI GCAGC 9 cut(s) 229, 303, 944, 1059, 1183, 1555, 1744, 1762, 2291
BcgI CGANNNNNNTGC 2 cut(s) 1929, 1963
BciT130I CCWGG 4 cut(s) 199, 686, 785, 1924
BciVI GTATCC 1 cut(s) 1394
BclI TGATCA 2 cut(s) 517, 2410
BcnI CCSGG 1 cut(s) 466
BcoDI GTCTC 3 cut(s) 42, 1832, 2210
BcuI ACTAGT 1 cut(s) 1505
BfaI CTAG 7 cut(s) 228, 1395, 1449, 1506, 2126, 2222, 2393
BfmI CTRYAG 1 cut(s) 2193
BfuAI ACCTGC 3 cut(s) 469, 1931, 2408
BfuI GTATCC 1 cut(s) 1394
BglII AGATCT 1 cut(s) 406
BisI GCNGC 9 cut(s) 218, 292, 958, 1073, 1197, 1569, 1751, 1758, 2305
BlsI GCNGC 9 cut(s) 219, 293, 959, 1074, 1198, 1570, 1752, 1759, 2306
Bme1390I CCNGG 5 cut(s) 199, 466, 686, 785, 1924
Bme18I GGWCC 5 cut(s) 202, 726, 1011, 1909, 2402
BmgBI CACGTC 1 cut(s) 1688
BmgT120I GGNCC 5 cut(s) 202, 726, 1011, 1909, 2402
BmiI GGNNCC 6 cut(s) 203, 329, 1054, 1526, 1725, 1864
BmrFI CCNGG 5 cut(s) 199, 466, 686, 785, 1924
BmrI ACTGGG 1 cut(s) 2549
BmsI GCATC 5 cut(s) 597, 1219, 1787, 2035, 2545
BmuI ACTGGG 1 cut(s) 2549
BpiI GAAGAC 1 cut(s) 2340
BplI GAGNNNNNCTC 2 cut(s) 2374, 2406
Bpu10I CCTNAGC 1 cut(s) 1821
BpuEI CTTGAG 3 cut(s) 1511, 1595, 2354
BpuMI CCSGG 1 cut(s) 466
BsaAI YACGTR 2 cut(s) 177, 1766
BsaBI GATNNNNATC 2 cut(s) 1359, 1630
BsaI GGTCTC 2 cut(s) 42, 1832
BsaJI CCNNGG 6 cut(s) 198, 784, 838, 1296, 1922, 1923
BsaWI WCCGGW 1 cut(s) 2449
BsaXI ACNNNNNCTCC 2 cut(s) 1531, 1561
Bsc4I CCNNNNNNNGG 6 cut(s) 211, 863, 991, 1397, 1940, 2516
Bse1I ACTGG 6 cut(s) 494, 933, 1864, 1941, 2098, 2544
Bse3DI GCAATG 3 cut(s) 679, 1241, 1424
Bse8I GATNNNNATC 2 cut(s) 1359, 1630
BseBI CCWGG 4 cut(s) 199, 686, 785, 1924
BseDI CCNNGG 6 cut(s) 198, 784, 838, 1296, 1922, 1923
BseJI GATNNNNATC 2 cut(s) 1359, 1630
BseLI CCNNNNNNNGG 6 cut(s) 211, 863, 991, 1397, 1940, 2516
BseMI GCAATG 3 cut(s) 679, 1241, 1424
BseMII CTCAG 5 cut(s) 288, 872, 929, 1812, 2502
BseNI ACTGG 6 cut(s) 494, 933, 1864, 1941, 2098, 2544
BseRI GAGGAG 1 cut(s) 846
BseSI GKGCMC 4 cut(s) 1390, 1771, 1930, 2236
BseXI GCAGC 9 cut(s) 229, 303, 944, 1059, 1183, 1555, 1744, 1762, 2291
BseYI CCCAGC 1 cut(s) 421
BsgI GTGCAG 5 cut(s) 236, 441, 927, 1112, 1554
Bsh1236I CGCG 1 cut(s) 110
Bsh1285I CGRYCG 1 cut(s) 1634
BshFI GGCC 3 cut(s) 22, 386, 1644
BsiEI CGRYCG 1 cut(s) 1634
BsiHKAI GWGCWC 4 cut(s) 1390, 1771, 1888, 2236
BsiSI CCGG 2 cut(s) 465, 2450
BslFI GGGAC 1 cut(s) 1698
BslI CCNNNNNNNGG 6 cut(s) 211, 863, 991, 1397, 1940, 2516
BsmAI GTCTC 3 cut(s) 42, 1832, 2210
BsmFI GGGAC 1 cut(s) 1698
BsmI GAATGC 2 cut(s) 293, 2306
BsnI GGCC 3 cut(s) 22, 386, 1644
Bso31I GGTCTC 2 cut(s) 42, 1832
Bsp1286I GDGCHC 5 cut(s) 1390, 1771, 1888, 1930, 2236
Bsp1407I TGTACA 1 cut(s) 142
Bsp19I CCATGG 1 cut(s) 1296
BspACI CCGC 9 cut(s) 186, 301, 1383, 1482, 1804, 1840, 2140, 2144, 2558
BspANI GGCC 3 cut(s) 22, 386, 1644
BspCNI CTCAG 5 cut(s) 289, 871, 928, 1813, 2503
BspFNI CGCG 1 cut(s) 110
BspLI GGNNCC 6 cut(s) 203, 329, 1054, 1526, 1725, 1864
BspMI ACCTGC 3 cut(s) 469, 1931, 2408
BspPI GGATC 4 cut(s) 436, 842, 1492, 2589
BspTNI GGTCTC 2 cut(s) 42, 1832
BsrBI CCGCTC 1 cut(s) 301
BsrDI GCAATG 3 cut(s) 679, 1241, 1424
BsrGI TGTACA 1 cut(s) 142
BsrI ACTGG 6 cut(s) 494, 933, 1864, 1941, 2098, 2544
BssECI CCNNGG 6 cut(s) 198, 784, 838, 1296, 1922, 1923
BssT1I CCWWGG 2 cut(s) 838, 1296
Bst2UI CCWGG 4 cut(s) 199, 686, 785, 1924
Bst4CI ACNGT 7 cut(s) 608, 764, 1000, 1315, 1600, 2170, 2431
BstAUI TGTACA 1 cut(s) 142
BstBAI YACGTR 2 cut(s) 177, 1766
BstC8I GCNNGC 7 cut(s) 1172, 1755, 1850, 2084, 2088, 2142, 2437
BstDEI CTNAG 7 cut(s) 17, 297, 858, 915, 1821, 1903, 2511
BstDSI CCRYGG 1 cut(s) 1296
BstEII GGTNACC 1 cut(s) 764
BstFNI CGCG 1 cut(s) 110
BstMAI GTCTC 3 cut(s) 42, 1832, 2210
BstMCI CGRYCG 1 cut(s) 1634
BstMWI GCNNNNNNNGC 6 cut(s) 392, 1343, 1577, 1586, 1766, 1775
BstNI CCWGG 4 cut(s) 199, 686, 785, 1924
BstNSI RCATGY 4 cut(s) 238, 664, 1196, 1984
BstPI GGTNACC 1 cut(s) 764
BstSCI CCNGG 5 cut(s) 197, 464, 684, 783, 1922
BstSFI CTRYAG 1 cut(s) 2193
BstSLI GKGCMC 4 cut(s) 1390, 1771, 1930, 2236
BstUI CGCG 1 cut(s) 110
BstV1I GCAGC 9 cut(s) 229, 303, 944, 1059, 1183, 1555, 1744, 1762, 2291
BstV2I GAAGAC 1 cut(s) 2340
BstX2I RGATCY 4 cut(s) 406, 428, 847, 1484
BstYI RGATCY 4 cut(s) 406, 428, 847, 1484
BsuI GTATCC 1 cut(s) 1394
BsuRI GGCC 3 cut(s) 22, 386, 1644
BtgI CCRYGG 1 cut(s) 1296
BtrI CACGTC 1 cut(s) 1688
BtsI GCAGTG 2 cut(s) 1152, 2331
BtsIMutI CAGTG 6 cut(s) 613, 944, 1152, 1227, 1934, 2331
BveI ACCTGC 3 cut(s) 469, 1931, 2408
Cac8I GCNNGC 7 cut(s) 1172, 1755, 1850, 2084, 2088, 2142, 2437
CaiI CAGNNNCTG 1 cut(s) 2242
Cfr13I GGNCC 5 cut(s) 202, 726, 1011, 1909, 2402
CseI GACGC 1 cut(s) 2484
Csp6I GTAC 5 cut(s) 4, 143, 982, 1225, 1984
CviAII CATG 9 cut(s) 235, 661, 812, 1193, 1297, 1309, 1469, 1981, 2441
CviQI GTAC 5 cut(s) 4, 143, 982, 1225, 1984
DdeI CTNAG 7 cut(s) 17, 297, 858, 915, 1821, 1903, 2511
DraIII CACNNNGTG 1 cut(s) 177
EciI GGCGGA 1 cut(s) 1793
Eco130I CCWWGG 2 cut(s) 838, 1296
Eco147I AGGCCT 1 cut(s) 22
Eco31I GGTCTC 2 cut(s) 42, 1832
Eco32I GATATC 3 cut(s) 1293, 1545, 1735
Eco47I GGWCC 5 cut(s) 202, 726, 1011, 1909, 2402
Eco57I CTGAAG 5 cut(s) 686, 1440, 1641, 1739, 2388
Eco91I GGTNACC 1 cut(s) 764
EcoO109I RGGNCCY 1 cut(s) 1909
EcoO65I GGTNACC 1 cut(s) 764
EcoRI GAATTC 1 cut(s) 2488
EcoRII CCWGG 4 cut(s) 197, 684, 783, 1922
EcoRV GATATC 3 cut(s) 1293, 1545, 1735
EcoT14I CCWWGG 2 cut(s) 838, 1296
ErhI CCWWGG 2 cut(s) 838, 1296
FaeI CATG 9 cut(s) 238, 664, 815, 1196, 1300, 1312, 1472, 1984, 2444
FalI AAGNNNNNCTT 2 cut(s) 1413, 1445
FaqI GGGAC 1 cut(s) 1698
FatI CATG 9 cut(s) 234, 660, 811, 1192, 1296, 1308, 1468, 1980, 2440
FauI CCCGC 2 cut(s) 2133, 2137
FauNDI CATATG 1 cut(s) 2533
FbaI TGATCA 2 cut(s) 517, 2410
FblI GTMKAC 3 cut(s) 105, 1266, 2498
Fnu4HI GCNGC 9 cut(s) 218, 292, 958, 1073, 1197, 1569, 1751, 1758, 2305
Fsp4HI GCNGC 9 cut(s) 218, 292, 958, 1073, 1197, 1569, 1751, 1758, 2305
FspBI CTAG 7 cut(s) 228, 1395, 1449, 1506, 2126, 2222, 2393
GluI GCNGC 9 cut(s) 218, 292, 958, 1073, 1197, 1569, 1751, 1758, 2305
GsaI CCCAGC 1 cut(s) 425
HaeIII GGCC 3 cut(s) 22, 386, 1644
HapII CCGG 2 cut(s) 465, 2450
HgaI GACGC 1 cut(s) 2484
Hin1II CATG 9 cut(s) 238, 664, 815, 1196, 1300, 1312, 1472, 1984, 2444
HincII GTYRAC 1 cut(s) 1181
HindII GTYRAC 1 cut(s) 1181
HindIII AAGCTT 1 cut(s) 1318
HpaII CCGG 2 cut(s) 465, 2450
HphI GGTGA 6 cut(s) 286, 758, 1006, 1706, 1754, 2474
Hpy166II GTNNAC 9 cut(s) 106, 1181, 1225, 1267, 1388, 1769, 2099, 2234, 2499
Hpy8I GTNNAC 9 cut(s) 106, 1181, 1225, 1267, 1388, 1769, 2099, 2234, 2499
Hpy99I CGWCG 2 cut(s) 62, 210
HpyAV CCTTC 9 cut(s) 91, 248, 373, 533, 1401, 1616, 1655, 1714, 2509
HpyCH4III ACNGT 7 cut(s) 608, 764, 1000, 1315, 1600, 2170, 2431
HpyCH4IV ACGT 3 cut(s) 176, 1687, 1765
HpyF10VI GCNNNNNNNGC 6 cut(s) 392, 1343, 1577, 1586, 1766, 1775
HpyF3I CTNAG 7 cut(s) 17, 297, 858, 915, 1821, 1903, 2511
HpySE526I ACGT 3 cut(s) 176, 1687, 1765
Hsp92II CATG 9 cut(s) 238, 664, 815, 1196, 1300, 1312, 1472, 1984, 2444
Ksp22I TGATCA 2 cut(s) 517, 2410
LmnI GCTCC 3 cut(s) 542, 2116, 2239
Lsp1109I GCAGC 9 cut(s) 229, 303, 944, 1059, 1183, 1555, 1744, 1762, 2291
LweI GCATC 5 cut(s) 597, 1219, 1787, 2035, 2545
MaeI CTAG 7 cut(s) 228, 1395, 1449, 1506, 2126, 2222, 2393
MaeII ACGT 3 cut(s) 176, 1687, 1765
MbiI CCGCTC 1 cut(s) 301
MfeI CAATTG 1 cut(s) 551
MflI RGATCY 4 cut(s) 406, 428, 847, 1484
MhlI GDGCHC 5 cut(s) 1390, 1771, 1888, 1930, 2236
MlyI GAGTC 5 cut(s) 88, 146, 2128, 2212, 2283
MmeI TCCRAC 1 cut(s) 2338
MroXI GAANNNNTTC 2 cut(s) 889, 910
MseI TTAA 5 cut(s) 509, 731, 759, 1229, 1253
MslI CAYNNNNRTG 2 cut(s) 771, 1134
MspA1I CMGCKG 1 cut(s) 1717
MspI CCGG 2 cut(s) 465, 2450
MspR9I CCNGG 5 cut(s) 199, 466, 686, 785, 1924
MunI CAATTG 1 cut(s) 551
Mva1269I GAATGC 2 cut(s) 293, 2306
MvaI CCWGG 4 cut(s) 199, 686, 785, 1924
MvnI CGCG 1 cut(s) 110
MwoI GCNNNNNNNGC 6 cut(s) 392, 1343, 1577, 1586, 1766, 1775
NciI CCSGG 1 cut(s) 466
NcoI CCATGG 1 cut(s) 1296
NdeI CATATG 1 cut(s) 2533
NlaIII CATG 9 cut(s) 238, 664, 815, 1196, 1300, 1312, 1472, 1984, 2444
NlaIV GGNNCC 6 cut(s) 203, 329, 1054, 1526, 1725, 1864
NmuCI GTSAC 9 cut(s) 151, 230, 274, 764, 994, 1594, 2021, 2063, 2120
NspI RCATGY 4 cut(s) 238, 664, 1196, 1984
PaqCI CACCTGC 1 cut(s) 469
PasI CCCWGGG 1 cut(s) 1923
PceI AGGCCT 1 cut(s) 22
PciI ACATGT 1 cut(s) 1980
PctI GAATGC 2 cut(s) 293, 2306
PdmI GAANNNNTTC 2 cut(s) 889, 910
PflFI GACNNNGTC 1 cut(s) 928
PkrI GCNGC 9 cut(s) 219, 293, 959, 1074, 1198, 1570, 1752, 1759, 2306
Ple19I CGATCG 1 cut(s) 1634
PleI GAGTC 5 cut(s) 87, 145, 2128, 2212, 2282
PpsI GAGTC 5 cut(s) 87, 145, 2128, 2212, 2282
Ppu21I YACGTR 2 cut(s) 177, 1766
PpuMI RGGWCCY 1 cut(s) 1909
PscI ACATGT 1 cut(s) 1980
Psp5II RGGWCCY 1 cut(s) 1909
Psp6I CCWGG 4 cut(s) 197, 684, 783, 1922
PspEI GGTNACC 1 cut(s) 764
PspFI CCCAGC 1 cut(s) 421
PspGI CCWGG 4 cut(s) 197, 684, 783, 1922
PspN4I GGNNCC 6 cut(s) 203, 329, 1054, 1526, 1725, 1864
PspPI GGNCC 5 cut(s) 202, 726, 1011, 1909, 2402
PspPPI RGGWCCY 1 cut(s) 1909
PstNI CAGNNNCTG 1 cut(s) 2242
PsuI RGATCY 4 cut(s) 406, 428, 847, 1484
PsyI GACNNNGTC 1 cut(s) 928
PvuI CGATCG 1 cut(s) 1634
PvuII CAGCTG 1 cut(s) 1717
RsaI GTAC 5 cut(s) 5, 144, 983, 1226, 1985
RsaNI GTAC 5 cut(s) 4, 143, 982, 1225, 1984
RseI CAYNNNNRTG 2 cut(s) 771, 1134
SaqAI TTAA 5 cut(s) 509, 731, 759, 1229, 1253
SatI GCNGC 9 cut(s) 218, 292, 958, 1073, 1197, 1569, 1751, 1758, 2305
Sau96I GGNCC 5 cut(s) 202, 726, 1011, 1909, 2402
SchI GAGTC 5 cut(s) 88, 146, 2128, 2212, 2283
ScrFI CCNGG 5 cut(s) 199, 466, 686, 785, 1924
SduI GDGCHC 5 cut(s) 1390, 1771, 1888, 1930, 2236
SfaNI GCATC 5 cut(s) 597, 1219, 1787, 2035, 2545
SfcI CTRYAG 1 cut(s) 2193
SinI GGWCC 5 cut(s) 202, 726, 1011, 1909, 2402
SmiMI CAYNNNNRTG 2 cut(s) 771, 1134
SmlI CTYRAG 3 cut(s) 1490, 1574, 2333
SmoI CTYRAG 3 cut(s) 1490, 1574, 2333
SpeI ACTAGT 1 cut(s) 1505
SseBI AGGCCT 1 cut(s) 22
SsiI CCGC 9 cut(s) 186, 301, 1383, 1482, 1804, 1840, 2140, 2144, 2558
SspMI CTAG 7 cut(s) 228, 1395, 1449, 1506, 2126, 2222, 2393
StuI AGGCCT 1 cut(s) 22
StyD4I CCNGG 5 cut(s) 197, 464, 684, 783, 1922
StyI CCWWGG 2 cut(s) 838, 1296
TaaI ACNGT 7 cut(s) 608, 764, 1000, 1315, 1600, 2170, 2431
TaiI ACGT 3 cut(s) 179, 1690, 1768
TaqI TCGA 4 cut(s) 95, 398, 1830, 2584
TaqII GACCGA 1 cut(s) 999
TatI WGTACW 3 cut(s) 142, 1224, 1983
Tru1I TTAA 5 cut(s) 509, 731, 759, 1229, 1253
Tru9I TTAA 5 cut(s) 509, 731, 759, 1229, 1253
TscAI CASTG 6 cut(s) 613, 951, 1159, 1227, 1941, 2331
TseFI GTSAC 9 cut(s) 151, 230, 274, 764, 994, 1594, 2021, 2063, 2120
TseI GCWGC 9 cut(s) 217, 291, 957, 1072, 1196, 1568, 1750, 1757, 2304
Tsp45I GTSAC 9 cut(s) 151, 230, 274, 764, 994, 1594, 2021, 2063, 2120
TspDTI ATGAA 8 cut(s) 828, 1691, 1782, 2162, 2193, 2301, 2550, 2553
TspGWI ACGGA 2 cut(s) 194, 2001
TspRI CASTG 6 cut(s) 613, 951, 1159, 1227, 1941, 2331
Tth111I GACNNNGTC 1 cut(s) 928
VneI GTGCAC 3 cut(s) 1386, 1767, 2232
VpaK11BI GGWCC 5 cut(s) 202, 726, 1011, 1909, 2402
XapI RAATTY 4 cut(s) 258, 1669, 2318, 2488
XceI RCATGY 4 cut(s) 238, 664, 1196, 1984
XcmI CCANNNNNNNNNTGG 2 cut(s) 246, 2260
XmiI GTMKAC 3 cut(s) 105, 1266, 2498
XmnI GAANNNNTTC 2 cut(s) 889, 910
XspI CTAG 7 cut(s) 228, 1395, 1449, 1506, 2126, 2222, 2393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.