Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0005400

Physical Location & Seq

Genomic Coordinates Forward (+)

26134028 .. 26139578

Gene Structure 5551 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGCAGGGGAGGCGCTGGAGTGATGGACTTCACCAAGCAGTTGAAGCAAAAGAAGGTCTGCCCATTCAAAATGAAACAGTGACACTTGCTTCAATTAGCTACCAAAATTTCTTTCTCCAGTTCCCAAAACTTTGTGGGATGACTGGCACTGCAGCAACTGAAAGCACAGAATTTGAAAGTATATACAAGCTTAAAGTTACAATTGTTCCAACAAACAAGCCTATGATTAGAAAGGATGAATCTGATGTAGTTTTCAGGGCAACTAAAGGAAAATGGCGGGCTGTTGTAGTAGAGATTTCTAGAATGAACAAGACAGGTCGTCCTGTACTTGTTGGTACAACTAGTGTTGAGCAGAGTGACTCATTGTCTGAGCAATTGCAAGAAGTTGGAATTCCCCATGAGGTTCTCAATGCAAAGCCAGAGAATGTGGAGAGGGAAGCAGAAATTGTAGCACAAAGTGGACGTCTCGGGGCAGTGACTATTGCGACCAATATGGCAGGTCGAGGAACTGACATTATCCTTGGTGGGAATGCTGAATTTATGGCAAGGCTGAAGCTACGTGAGATGCTTATGCCAAGAGTTGTTAAACTAACAGAAGGTGGTTATGTGTCAGTGAAAAAACTTCCCCCAAAGAAATCATGGAAGGTCAATGAAAATCTATTTCCATGCAAACTATCCAATGAAAAGGCCAAGTTGGCTGAGGAAGCTGTAAAGTTAGCTGTTGAAACGTGGGGTCAGAGGTCATTAAATGAGCTTGAAGCAGAGGAGCGTTTATCTTATTCTTGTGAAAAGGGCCCTGCTGAGGACCAAGTCATAGCCAAACTGCGGAGTGCATTTCTAGAAATTGTTAAAGAATATAAGGTCTACACAGAGGAAGAAAGAAAGAAGGTTGTGTCATCTGGTGGGCTTCATGTGGTGGGGACAGAACGCCATGAATCTCGTCGAATCGATAATCAGCTTCGTGGTCGAACTGGAAGGCAGGGGGATCCTGGAAGTTCTCGGTTCTTCTTAAGTCTTGAAGACAACATCTTTCGTATATTTGGTGGAGACCGTATTCAGGGTTTAATGAGAGCTTTCAGAGTTGAGGACCTGCCAATTGAGTCCAAGATGCTAACCAAAGCACTAGATGAAGCTCAACGGAAAGTGGAAAATTATTTCTTTGATATCCGAAAGCAATTATTTGAGTTTGATGAAGTGTTAAACAGCCAAAGAGACCGTGTCTATACAGAAAGAAGACGAGCCCTTGAATCTGACAATCTCCAATCACTTATTATTGAATATGCTGAACTAACAATGGATGATATCTTGGAGGCAAATATTGGGTCAGATGCTTCAAAAGAAAGTTGGGATCTTGAGAAGCTCATCAAGAAACTTCAACAATATTGCTACCTATTGAATGATCTGACACCAGACTTGCTGAGGAGCAATTGTTCAAGTTATGAGGATTTGCAAGAGTACCTTCGTCTCCGTGGCCGTGAAGCATATTTGCAGAAAAGGGATATTATTGAGAGCAAAGCACCAGGCTTGATGAAGGATGCTGAAAGGTTCTTGGTTTTGAGCAATATTGATCGCCTGTGGAAGGAGCACTTGCAAGCACTCAAGTTTGTTCAACAGGCTGTTGGTTTACGTGGATACGCACAACGGGATCCACTTATTGAATACAAGCTTGAAGGCTATAATCTTTTCTTAGAGATGATGGCACAGATAAGAAGAAATGTTATATATTCCATATACCAGTTTCAACCGGTGATGGTAAAGAAGGATGGAGACCAAAGAGAGAGTAACAATTCAGTTGTCACAAATGGTAGGAGTAATAATAACCCTGATCCATTGAGCTCTGTCGATCCTTCAGCAGCTGCGACCCCCCAATCTAGTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005524 GO:0006810 GO:0008104 GO:0008144 GO:0008150 GO:0008320 GO:0008565 GO:0015031 GO:0015399 GO:0015405 GO:0015440 GO:0015450 GO:0015462 GO:0015833 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022804 GO:0022857 GO:0022884 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033220 GO:0035639 GO:0036094 GO:0042623 GO:0042626 GO:0042886 GO:0042887 GO:0043167 GO:0043168 GO:0043492 GO:0045184 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071806 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1904680

KEGG Pathways

Metabolic & Signaling

ko02024 ko03060 ko03070 map02024 map03060 map03070

Pfam Domains

Protein Families

SecA_DEAD SecA_PP_bind SecA_SW

Protein Analysis

627

Amino Acids

71.25

Weight (kDa)

6.64

Isoelectric Point (pI)

46.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SecA_DEAD	PF07517	9 - 59	4.1e-15	SecA DEAD-like domain
P-loop_SecA	PF21090	74 - 363	1.2e-82	SecA P-loop domain
SecA_SW	PF07516	365 - 581	5.7e-57	SecA Wing and Scaffold domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005400)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01800 AT4G01800 AT4G01800
fragaria_vesca	FvH4_1g26240
malus_domestica	MD17G1285000.v1.1
prunus_persica	Prupe.3G002700_v2.0.a1
pyrus_communis	pycom09g19850 pycom17g28080 pycom17g28090
rosa_chinensis	RchiOBHm_Chr3g0485781
rosa_laevigata	RLG00000023125
rosa_multiflora	Rmu_co8471925.1_g000001 Rmu_sc0012870.1_g000002
rosa_roxburghii	Rroxscaffold_2G00123840
rosa_rugosa	Rorug03G0221400
rosa_samantha	Rh1AG180100 Rh1CG167100 Rh3AG270700 Rh3BG306200 Rh3BG306300 Rh3CG304600 Rh3DG300700 Rh4AG241300 Rh4AG241400 Rh4BG244600 Rh4BG244700 Rh4CG255400 Rh7CG119700
rosa_wichuraiana	Rw3G024110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	466
Acc36I	ACCTGC	2 cut(s)	488, 1098
AccI	GTMKAC	1 cut(s)	864
AciI	CCGC	2 cut(s)	277, 826
AclWI	GGATC	7 cut(s)	980, 993, 1356, 1640, 1653, 1820, 1838
AcoI	YGGCCR	1 cut(s)	1471
AcsI	RAATTY	4 cut(s)	106, 170, 390, 536
AcuI	CTGAAG	2 cut(s)	572, 1833
AcyI	GRCGYC	1 cut(s)	463
AdeI	CACNNNGTG	1 cut(s)	458
AfaI	GTAC	3 cut(s)	327, 337, 1457
AfiI	CCNNNNNNNGG	4 cut(s)	802, 825, 1057, 1579
AflII	CTTAAG	1 cut(s)	1009
AgeI	ACCGGT	1 cut(s)	1744
AhdI	GACNNNNNGTC	2 cut(s)	318, 364
AhlI	ACTAGT	1 cut(s)	341
AjnI	CCWGG	2 cut(s)	988, 1519
AjuI	GAANNNNNNNTTGG	2 cut(s)	96, 128
AloI	GAACNNNNNNTCC	2 cut(s)	1414, 1446
Alw21I	GWGCWC	2 cut(s)	1587, 1838
Alw26I	GTCTC	5 cut(s)	470, 1041, 1206, 1469, 1761
AlwI	GGATC	7 cut(s)	980, 993, 1356, 1640, 1653, 1820, 1838
AlwNI	CAGNNNCTG	2 cut(s)	158, 1856
Ama87I	CYCGRG	1 cut(s)	467
AoxI	GGCC	3 cut(s)	687, 793, 1471
ApaI	GGGCCC	1 cut(s)	797
ApeKI	GCWGC	3 cut(s)	152, 1853, 1856
ApoI	RAATTY	4 cut(s)	106, 170, 390, 536
ArsI	GACNNNNNNTTYG	4 cut(s)	448, 480, 1307, 1339
AsiGI	ACCGGT	1 cut(s)	1744
AspLEI	GCGC	1 cut(s)	15
AspS9I	GGNCC	4 cut(s)	793, 794, 805, 1087
AsuHPI	GGTGA	2 cut(s)	23, 1759
AvaI	CYCGRG	1 cut(s)	467
AvaII	GGWCC	2 cut(s)	805, 1087
BaeGI	GKGCMC	1 cut(s)	797
BamHI	GGATCC	2 cut(s)	985, 1645
BanII	GRGCYC	3 cut(s)	797, 1243, 1838
BbsI	GAAGAC	2 cut(s)	1026, 1240
Bbv12I	GWGCWC	2 cut(s)	1587, 1838
BbvCI	CCTCAGC	3 cut(s)	699, 801, 1418
BbvI	GCAGC	3 cut(s)	164, 1843, 1865
BccI	CCATC	4 cut(s)	17, 1690, 1744, 1757
BceAI	ACGGC	1 cut(s)	1458
BciT130I	CCWGG	2 cut(s)	990, 1521
BciVI	GTATCC	1 cut(s)	1625
BcoDI	GTCTC	5 cut(s)	470, 1041, 1206, 1469, 1761
BcuI	ACTAGT	1 cut(s)	341
BfaI	CTAG	5 cut(s)	300, 342, 839, 1124, 1872
BfmI	CTRYAG	1 cut(s)	150
BfoI	RGCGCY	1 cut(s)	16
BfrI	CTTAAG	1 cut(s)	1009
BfuAI	ACCTGC	2 cut(s)	488, 1098
BfuI	GTATCC	1 cut(s)	1625
BglI	GCCNNNNNGGC	1 cut(s)	695
BisI	GCNGC	3 cut(s)	153, 1854, 1857
BlsI	GCNGC	3 cut(s)	154, 1855, 1858
Bme1390I	CCNGG	2 cut(s)	990, 1521
Bme18I	GGWCC	2 cut(s)	805, 1087
BmeRI	GACNNNNNGTC	2 cut(s)	318, 364
BmeT110I	CYCGRG	1 cut(s)	467
BmgT120I	GGNCC	4 cut(s)	793, 794, 805, 1087
BmiI	GGNNCC	3 cut(s)	795, 987, 1647
BmrFI	CCNGG	2 cut(s)	990, 1521
BmsI	GCATC	4 cut(s)	555, 1098, 1318, 1525
BpiI	GAAGAC	2 cut(s)	1026, 1240
BpmI	CTGGAG	2 cut(s)	37, 101
Bpu10I	CCTNAGC	3 cut(s)	699, 801, 1418
BpuEI	CTTGAG	2 cut(s)	1373, 1583
Bsa29I	ATCGAT	1 cut(s)	948
BsaAI	YACGTR	2 cut(s)	560, 1628
BsaHI	GRCGYC	1 cut(s)	463
BsaI	GGTCTC	3 cut(s)	1041, 1206, 1761
BsaJI	CCNNGG	2 cut(s)	520, 1468
BsaWI	WCCGGW	1 cut(s)	1744
BsaXI	ACNNNNNCTCC	2 cut(s)	1414, 1444
Bsc4I	CCNNNNNNNGG	4 cut(s)	802, 825, 1057, 1579
Bse118I	RCCGGY	1 cut(s)	1744
Bse1I	ACTGG	4 cut(s)	118, 148, 976, 1735
BseBI	CCWGG	2 cut(s)	990, 1521
BseCI	ATCGAT	1 cut(s)	948
BseDI	CCNNGG	2 cut(s)	520, 1468
BseGI	GGATG	5 cut(s)	144, 241, 1303, 1540, 1768
BseLI	CCNNNNNNNGG	4 cut(s)	802, 825, 1057, 1579
BseMII	CTCAG	4 cut(s)	360, 690, 792, 1409
BseNI	ACTGG	4 cut(s)	118, 148, 976, 1735
BseRI	GAGGAG	2 cut(s)	779, 1435
BseSI	GKGCMC	1 cut(s)	797
BseXI	GCAGC	3 cut(s)	164, 1843, 1865
BshFI	GGCC	3 cut(s)	689, 795, 1473
BshTI	ACCGGT	1 cut(s)	1744
BshVI	ATCGAT	1 cut(s)	948
BsiHKAI	GWGCWC	2 cut(s)	1587, 1838
BsiHKCI	CYCGRG	1 cut(s)	467
BsiSI	CCGG	1 cut(s)	1745
BslFI	GGGAC	1 cut(s)	934
BslI	CCNNNNNNNGG	4 cut(s)	802, 825, 1057, 1579
BsmAI	GTCTC	5 cut(s)	470, 1041, 1206, 1469, 1761
BsmBI	CGTCTC	2 cut(s)	470, 1469
BsmFI	GGGAC	1 cut(s)	934
BsmI	GAATGC	1 cut(s)	535
BsnI	GGCC	3 cut(s)	689, 795, 1473
Bso31I	GGTCTC	3 cut(s)	1041, 1206, 1761
BsoBI	CYCGRG	1 cut(s)	467
Bsp120I	GGGCCC	1 cut(s)	793
Bsp1286I	GDGCHC	4 cut(s)	797, 1243, 1587, 1838
Bsp143I	GATC	7 cut(s)	985, 1348, 1399, 1567, 1645, 1825, 1843
BspACI	CCGC	2 cut(s)	277, 826
BspANI	GGCC	3 cut(s)	689, 795, 1473
BspCNI	CTCAG	4 cut(s)	361, 691, 793, 1410
BspDI	ATCGAT	1 cut(s)	948
BspLI	GGNNCC	3 cut(s)	795, 987, 1647
BspMAI	CTGCAG	1 cut(s)	154
BspMI	ACCTGC	2 cut(s)	488, 1098
BspPI	GGATC	7 cut(s)	980, 993, 1356, 1640, 1653, 1820, 1838
BspTI	CTTAAG	1 cut(s)	1009
BspTNI	GGTCTC	3 cut(s)	1041, 1206, 1761
BsrFI	RCCGGY	1 cut(s)	1744
BsrI	ACTGG	4 cut(s)	118, 148, 976, 1735
BssAI	RCCGGY	1 cut(s)	1744
BssECI	CCNNGG	2 cut(s)	520, 1468
BssMI	GATC	7 cut(s)	985, 1348, 1399, 1567, 1645, 1825, 1843
BssNI	GRCGYC	1 cut(s)	463
BssT1I	CCWWGG	1 cut(s)	520
Bst2UI	CCWGG	2 cut(s)	990, 1521
Bst4CI	ACNGT	3 cut(s)	79, 1052, 1217
BstACI	GRCGYC	1 cut(s)	463
BstAFI	CTTAAG	1 cut(s)	1009
BstBAI	YACGTR	2 cut(s)	560, 1628
BstC8I	GCNNGC	2 cut(s)	279, 1593
BstDEI	CTNAG	5 cut(s)	369, 699, 801, 1418, 1687
BstDSI	CCRYGG	1 cut(s)	1468
BstENI	CCTNNNNNAGG	1 cut(s)	1577
BstF5I	GGATG	5 cut(s)	144, 241, 1303, 1540, 1768
BstH2I	RGCGCY	1 cut(s)	16
BstHHI	GCGC	1 cut(s)	15
BstKTI	GATC	7 cut(s)	988, 1351, 1402, 1570, 1648, 1828, 1846
BstMAI	GTCTC	5 cut(s)	470, 1041, 1206, 1469, 1761
BstMBI	GATC	7 cut(s)	985, 1348, 1399, 1567, 1645, 1825, 1843
BstMWI	GCNNNNNNNGC	4 cut(s)	10, 44, 695, 704
BstNI	CCWGG	2 cut(s)	990, 1521
BstSCI	CCNGG	2 cut(s)	988, 1519
BstSFI	CTRYAG	1 cut(s)	150
BstSLI	GKGCMC	1 cut(s)	797
BstV1I	GCAGC	3 cut(s)	164, 1843, 1865
BstV2I	GAAGAC	2 cut(s)	1026, 1240
BstX2I	RGATCY	3 cut(s)	985, 1348, 1645
BstYI	RGATCY	3 cut(s)	985, 1348, 1645
Bsu15I	ATCGAT	1 cut(s)	948
BsuI	GTATCC	1 cut(s)	1625
BsuRI	GGCC	3 cut(s)	689, 795, 1473
BsuTUI	ATCGAT	1 cut(s)	948
BtgI	CCRYGG	1 cut(s)	1468
BtsCI	GGATG	5 cut(s)	144, 241, 1303, 1540, 1768
BtsI	GCAGTG	2 cut(s)	147, 480
BtsIMutI	CAGTG	4 cut(s)	84, 147, 480, 618
BveI	ACCTGC	2 cut(s)	488, 1098
Cac8I	GCNNGC	2 cut(s)	279, 1593
CaiI	CAGNNNCTG	2 cut(s)	158, 1856
CfoI	GCGC	1 cut(s)	15
Cfr10I	RCCGGY	1 cut(s)	1744
Cfr13I	GGNCC	4 cut(s)	793, 794, 805, 1087
ClaI	ATCGAT	1 cut(s)	948
Csp6I	GTAC	3 cut(s)	326, 336, 1456
CspAI	ACCGGT	1 cut(s)	1744
CviAII	CATG	5 cut(s)	398, 639, 666, 911, 932
CviQI	GTAC	3 cut(s)	326, 336, 1456
DdeI	CTNAG	5 cut(s)	369, 699, 801, 1418, 1687
DpnI	GATC	7 cut(s)	987, 1350, 1401, 1569, 1647, 1827, 1845
DpnII	GATC	7 cut(s)	985, 1348, 1399, 1567, 1645, 1825, 1843
DraIII	CACNNNGTG	1 cut(s)	458
DriI	GACNNNNNGTC	2 cut(s)	318, 364
EaeI	YGGCCR	1 cut(s)	1471
Eam1105I	GACNNNNNGTC	2 cut(s)	318, 364
Ecl136II	GAGCTC	1 cut(s)	1836
Eco130I	CCWWGG	1 cut(s)	520
Eco24I	GRGCYC	3 cut(s)	797, 1243, 1838
Eco31I	GGTCTC	3 cut(s)	1041, 1206, 1761
Eco32I	GATATC	2 cut(s)	1165, 1303
Eco47I	GGWCC	2 cut(s)	805, 1087
Eco53kI	GAGCTC	1 cut(s)	1836
Eco57I	CTGAAG	2 cut(s)	572, 1833
Eco88I	CYCGRG	1 cut(s)	467
EcoICRI	GAGCTC	1 cut(s)	1836
EcoNI	CCTNNNNNAGG	1 cut(s)	1577
EcoO109I	RGGNCCY	3 cut(s)	793, 794, 1087
EcoRI	GAATTC	1 cut(s)	390
EcoRII	CCWGG	2 cut(s)	988, 1519
EcoRV	GATATC	2 cut(s)	1165, 1303
EcoT14I	CCWWGG	1 cut(s)	520
EcoT38I	GRGCYC	3 cut(s)	797, 1243, 1838
ErhI	CCWWGG	1 cut(s)	520
Esp3I	CGTCTC	2 cut(s)	470, 1469
FaeI	CATG	5 cut(s)	401, 642, 669, 914, 935
FalI	AAGNNNNNCTT	4 cut(s)	1443, 1475, 1571, 1603
FaqI	GGGAC	1 cut(s)	934
FatI	CATG	5 cut(s)	397, 638, 665, 910, 931
FauI	CCCGC	1 cut(s)	270
FblI	GTMKAC	1 cut(s)	864
Fnu4HI	GCNGC	3 cut(s)	153, 1854, 1857
FokI	GGATG	5 cut(s)	151, 248, 1310, 1547, 1775
FriOI	GRGCYC	3 cut(s)	797, 1243, 1838
Fsp4HI	GCNGC	3 cut(s)	153, 1854, 1857
FspBI	CTAG	5 cut(s)	300, 342, 839, 1124, 1872
GlaI	GCGC	1 cut(s)	14
GluI	GCNGC	3 cut(s)	153, 1854, 1857
GsuI	CTGGAG	2 cut(s)	37, 101
HaeII	RGCGCY	1 cut(s)	16
HaeIII	GGCC	3 cut(s)	689, 795, 1473
HapII	CCGG	1 cut(s)	1745
HhaI	GCGC	1 cut(s)	15
Hin1I	GRCGYC	1 cut(s)	463
Hin1II	CATG	5 cut(s)	401, 642, 669, 914, 935
Hin6I	GCGC	1 cut(s)	13
HinP1I	GCGC	1 cut(s)	13
HindIII	AAGCTT	2 cut(s)	188, 1664
HinfI	GANTC	6 cut(s)	239, 359, 935, 945, 1100, 1247
HpaII	CCGG	1 cut(s)	1745
HphI	GGTGA	2 cut(s)	23, 1759
Hpy166II	GTNNAC	3 cut(s)	461, 865, 1625
Hpy188I	TCNGA	8 cut(s)	244, 370, 738, 1079, 1169, 1252, 1327, 1404
Hpy188III	TCNNGA	5 cut(s)	300, 839, 1016, 1352, 1366
Hpy8I	GTNNAC	3 cut(s)	461, 865, 1625
Hpy99I	CGWCG	1 cut(s)	945
HpyCH4III	ACNGT	3 cut(s)	79, 1052, 1217
HpyCH4IV	ACGT	4 cut(s)	463, 559, 728, 1627
HpyCH4V	TGCA	9 cut(s)	4, 152, 379, 413, 669, 833, 1450, 1489, 1591
HpyF10VI	GCNNNNNNNGC	4 cut(s)	10, 44, 695, 704
HpyF3I	CTNAG	5 cut(s)	369, 699, 801, 1418, 1687
HpySE526I	ACGT	4 cut(s)	463, 559, 728, 1627
Hsp92I	GRCGYC	1 cut(s)	463
Hsp92II	CATG	5 cut(s)	401, 642, 669, 914, 935
HspAI	GCGC	1 cut(s)	13
Kzo9I	GATC	7 cut(s)	985, 1348, 1399, 1567, 1645, 1825, 1843
LmnI	GCTCC	3 cut(s)	766, 1422, 1582
Lsp1109I	GCAGC	3 cut(s)	164, 1843, 1865
LweI	GCATC	4 cut(s)	555, 1098, 1318, 1525
MaeI	CTAG	5 cut(s)	300, 342, 839, 1124, 1872
MaeII	ACGT	4 cut(s)	463, 559, 728, 1627
MaeIII	GTNAC	6 cut(s)	79, 196, 356, 475, 1781, 1795
MalI	GATC	7 cut(s)	987, 1350, 1401, 1569, 1647, 1827, 1845
MboI	GATC	7 cut(s)	985, 1348, 1399, 1567, 1645, 1825, 1843
MboII	GAAGA	5 cut(s)	887, 997, 1031, 1245, 1722
MfeI	CAATTG	4 cut(s)	201, 374, 1095, 1426
MflI	RGATCY	3 cut(s)	985, 1348, 1645
MhlI	GDGCHC	4 cut(s)	797, 1243, 1587, 1838
MlyI	GAGTC	2 cut(s)	353, 1109
MmeI	TCCRAC	2 cut(s)	233, 367
MseI	TTAA	8 cut(s)	192, 585, 746, 849, 1010, 1064, 1199, 1879
MspA1I	CMGCKG	1 cut(s)	1856
MspCI	CTTAAG	1 cut(s)	1009
MspI	CCGG	1 cut(s)	1745
MspR9I	CCNGG	2 cut(s)	990, 1521
MunI	CAATTG	4 cut(s)	201, 374, 1095, 1426
Mva1269I	GAATGC	1 cut(s)	535
MvaI	CCWGG	2 cut(s)	990, 1521
MwoI	GCNNNNNNNGC	4 cut(s)	10, 44, 695, 704
NdeII	GATC	7 cut(s)	985, 1348, 1399, 1567, 1645, 1825, 1843
NlaIII	CATG	5 cut(s)	401, 642, 669, 914, 935
NlaIV	GGNNCC	3 cut(s)	795, 987, 1647
NmuCI	GTSAC	4 cut(s)	79, 356, 475, 1795
PctI	GAATGC	1 cut(s)	535
PfeI	GAWTC	4 cut(s)	239, 935, 945, 1247
PflFI	GACNNNGTC	2 cut(s)	809, 1217
PfoI	TCCNGGA	1 cut(s)	988
PinAI	ACCGGT	1 cut(s)	1744
PkrI	GCNGC	3 cut(s)	154, 1855, 1858
PleI	GAGTC	2 cut(s)	353, 1108
PpsI	GAGTC	2 cut(s)	353, 1108
Ppu21I	YACGTR	2 cut(s)	560, 1628
PpuMI	RGGWCCY	1 cut(s)	1087
Psp124BI	GAGCTC	1 cut(s)	1838
Psp5II	RGGWCCY	1 cut(s)	1087
Psp6I	CCWGG	2 cut(s)	988, 1519
PspGI	CCWGG	2 cut(s)	988, 1519
PspN4I	GGNNCC	3 cut(s)	795, 987, 1647
PspOMI	GGGCCC	1 cut(s)	793
PspPI	GGNCC	4 cut(s)	793, 794, 805, 1087
PspPPI	RGGWCCY	1 cut(s)	1087
PstI	CTGCAG	1 cut(s)	154
PstNI	CAGNNNCTG	2 cut(s)	158, 1856
PsuI	RGATCY	3 cut(s)	985, 1348, 1645
PsyI	GACNNNGTC	2 cut(s)	809, 1217
PvuII	CAGCTG	1 cut(s)	1856
RsaI	GTAC	3 cut(s)	327, 337, 1457
RsaNI	GTAC	3 cut(s)	326, 336, 1456
SacI	GAGCTC	1 cut(s)	1838
SaqAI	TTAA	8 cut(s)	192, 585, 746, 849, 1010, 1064, 1199, 1879
SatI	GCNGC	3 cut(s)	153, 1854, 1857
Sau3AI	GATC	7 cut(s)	985, 1348, 1399, 1567, 1645, 1825, 1843
Sau96I	GGNCC	4 cut(s)	793, 794, 805, 1087
SchI	GAGTC	2 cut(s)	353, 1109
ScrFI	CCNGG	2 cut(s)	990, 1521
SduI	GDGCHC	4 cut(s)	797, 1243, 1587, 1838
SfaNI	GCATC	4 cut(s)	555, 1098, 1318, 1525
SfcI	CTRYAG	1 cut(s)	150
SinI	GGWCC	2 cut(s)	805, 1087
SmlI	CTYRAG	3 cut(s)	1009, 1352, 1598
SmoI	CTYRAG	3 cut(s)	1009, 1352, 1598
SpeI	ACTAGT	1 cut(s)	341
SsiI	CCGC	2 cut(s)	277, 826
SspI	AATATT	3 cut(s)	1318, 1382, 1564
SspMI	CTAG	5 cut(s)	300, 342, 839, 1124, 1872
SstI	GAGCTC	1 cut(s)	1838
StyD4I	CCNGG	2 cut(s)	988, 1519
StyI	CCWWGG	1 cut(s)	520
TaaI	ACNGT	3 cut(s)	79, 1052, 1217
TaiI	ACGT	4 cut(s)	466, 562, 731, 1630
TaqI	TCGA	5 cut(s)	502, 943, 948, 967, 1842
TatI	WGTACW	1 cut(s)	325
TfiI	GAWTC	4 cut(s)	239, 935, 945, 1247
Tru1I	TTAA	8 cut(s)	192, 585, 746, 849, 1010, 1064, 1199, 1879
Tru9I	TTAA	8 cut(s)	192, 585, 746, 849, 1010, 1064, 1199, 1879
TscAI	CASTG	4 cut(s)	84, 154, 480, 618
TseFI	GTSAC	4 cut(s)	79, 356, 475, 1795
TseI	GCWGC	3 cut(s)	152, 1853, 1856
Tsp45I	GTSAC	4 cut(s)	79, 356, 475, 1795
TspGWI	ACGGA	2 cut(s)	1153, 1457
TspRI	CASTG	4 cut(s)	84, 154, 480, 618
Tth111I	GACNNNGTC	2 cut(s)	809, 1217
Vha464I	CTTAAG	1 cut(s)	1009
VpaK11BI	GGWCC	2 cut(s)	805, 1087
XagI	CCTNNNNNAGG	1 cut(s)	1577
XapI	RAATTY	4 cut(s)	106, 170, 390, 536
XbaI	TCTAGA	2 cut(s)	299, 838
XcmI	CCANNNNNNNNNTGG	1 cut(s)	636
XmiI	GTMKAC	1 cut(s)	864
XspI	CTAG	5 cut(s)	300, 342, 839, 1124, 1872
ZraI	GACGTC	1 cut(s)	464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.