RchiOBHm_Chr6g0312101

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0007813
Physical Location & Seq
Forward (+)
68812999 .. 68818703
5705 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2820 bp
ATGCACCCAAGAAATAATGCAGCTGCAGACCAATCTCCGACCCAAATTAATTTTCTTCTTCACCAAAAACCCGAAAACCCTCTCCCTCTCTTCAATTTCTCCTCTGTCTCCAACCCCATCTCTCACTCGCAACCCTCTTCTCCATGGTTCTCTATCCTCCGCACCGCCATTGCCAATACAGACTTGCCCCTCGGAAAGCGCGCCCACGCCCTTATGTTAACCTCAGGGGAATGCCAAGATCATTTTCTAATCAACAATCTCATCACCATGTATTCGAAATGCAGGTCGCTCACATATGCACGCCATCTGTTCGATAAAAGTCCTGACCGAGACCTGGTCACCTGGAATGCCATTCTAGCAGCCTATGCACAAGCTGGGGGCCCTGTGGTTGAGAATGTTCAAGAGGGACTCGGCCTTTTCCGGCGGCTTCGTGAGTCTGTTGTGTTCACCAGTCGGCACACTTTGGCTTCCGTTTTGAAGCTGTGTTTGCTGTCAGGGCGTGTTTGGATTTCGGAGGCTGTTCAGGGTTACGCTCTGAAAATTGGGTTGGAGTGGGATGTGTTTGTTTCGGGTACCCTGGTGAATGTGTATTGTAAACTCAGAAGAGTTAAGGAGGCTCGGGCTTTGTTTGATGGGATGCTGGAACGGGATGTTGTGTTGTGGAACACAATGCTGAAGGCATATGTGGAAATGGGTCTTCAGGAAGAAGCACTTGCTCTTTTCTCCAAGTTTCATCAAAGTGGATTAGGTCCTGACCATGTTAGTGTGCGTTGTGTTCTTAGTGGGATTCACAAAGTTGATTATGTTGAAGGCAAGAGGTACATGGAGGAGGTTCAAGCATATGCAGCAAAGCTGGGGGAGTTTATTATAACTAATGTGGATGATGATGCCCATCCAACGAGTTTATGTGATCCTACTACTAATTCCGACATATTTCTGTGGAACAAGAAGTTGTCTAAGTATATCCGAGCTGGTGAAAATTGGGCTGCAATAGATTGCTTTAGAAATATGATTATATCGAAAGTTGGATATGACAAGGTGACATTAGTTATCATTCTATCTGCGATTGTGGACACAAATAATTTGGAGGTGGGGAAACAGATTCATGGTGCTGCTTTGAAATCAGATTTTGATTCTGTTCTTTTGGTAGCAAATAGCCTTATCAACATGTATTCAAAGGCTCGCTGTGTTCACTTTGCGAGAGAAGTATTCAATCACATGAAAGAAGTGGACCTAGTTTCATGGAACTCGATGATATCATGTTATGTGCAAAGCGGTTCAGGAGAGGAATCAGTAAACCTATTTATTGGTTTATTACGGGATGGTCTAAGACCTGATCAATTTACAATTGCAAGTATTTTAAGGGCTTGCTCCTCTCTTCAAGAAGGGCTGCATCTCAGTAAACAGGTTCATGTTCATGCAATAAAAACTGGTATTGCTGCTGACAGATTTGTTTCAACAGCTCTTATTGATGTTTATTCCAGAAGTGGAAAGATGGAGGAAGTGGAGCCCCTTTTAGAAAACAAAGTTAATTTCGATCTGCCATCTTGGAATGCATTGATGTTTGGGTACATAAAGAGTAATGACGGTCACAAAGCACTACAACTTATGAGGATGATTCATGAAGGTGGAAAGAGGGGAGACGAGATTACTTTGGCAACTGTTGCTAAGGCCACTAGTTGCCTGGTAGCGTTGGTACCGGGGAAGCAAATTCATGCTCATGTCATAAAAACAGGGTATTCAAAGGACTTATATGTTAACAGCAGTATTCTAGATATGTACATAAAATGTGGAGACATGGGAAGTGCGCACACAGTTTTCAATGACATTCCTGCACCTGATGATGTTGCGTGGACAACTCTAATCTCAGGATGTCTAGAAAATGGAGATGAAGGGCGCTCAGTGTCTATATACCATCAGATGAGGCAGTCAGGAGTTCATCCCGATGAATACACCTTAGCTACCCTCGTCAAAGCCGCCTCTTGTCTGACAGCATTGGAACAAGGGAAACAGATACATGCAGATGCAATAAAGTTGGAATATTCCTCAGACCCTTATGTTGCGACATCACTTGTTGACATGTATGCCAAGTGCGGTAATATAGAAGATGCATATCGTTTATTTAGAAGGATGGATGTCGGGAGCATTGTCCTGTGGAATGCCATGTTGGTGGGCTTTGCTCAACATGGAGACGCTGAAGAAGCACTAAATCTTTTCAGAGTCATGAAATCTAATAACATTTTGCCTGATAGAGTTACTTTCATTGGAGTTCTTTCTGCTTGCAGCCACTCTGGTTTAGTTTCTGAAGCTTACGAGCATTTTTCTTCAATGCAAAGAGATTACGGCATTGAACCTGAGATCGAGCACTACTCTTGTCTAGTCAATGCCCTTAGCCGCGCAGGGCGTGTTCAAGAGGCAGAAAAGCTGATAGCATCAATGCCATTTGAAGCTTCTGCTTCAATGTACAGAGCCCTGCTTGGTGCTTGCAGGGTTCAAGGGGACACAGAAACAGGAAAACGAGTAGCAGAACAGCTCTTGGCTATTGAGCCAACTGACTCATTGGCTTATGTTCTCATATCCAATATGAATGCTGCTGCCAACCAGTGGGATGCTGTGAAAGATGCTCGACGAATGATGAAACAGAAGAATGTAAAGAAAGAACCAGGTTTCAGTTGGATAGATGTGAAGAACAAGGTCCATTTGTTTCTGGTAGATGATAAATCCCATCCTGAAGCCGATTTGATATACGACAAGTTGGAGGACTTGATGAGATGGATCAGCGAAGAAGGGTATGTCCCTGATACAGAGTGTGCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1771 PAM2 PPR PPR_2 Smr

Protein Analysis

939

Amino Acids

104.54

Weight (kDa)

6.05

Isoelectric Point (pI)

41.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 216 - 263 7.1e-07 PPR repeat family
PPR_2 PF13041 411 - 458 6.9e-07 PPR repeat family
PPR_2 PF13041 613 - 659 1.1e-08 PPR repeat family
PPR_2 PF13041 715 - 762 2.5e-10 PPR repeat family
PPR PF01535 717 - 747 1.5e-06 PPR repeat
E_motif PF20431 834 - 894 1.3e-14 E motif
Eplus_motif PF20430 899 - 924 3.9e-08 E+ motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 869
Acc16I TGCGCA 1 cut(s) 1809
Acc36I ACCTGC 1 cut(s) 273
Acc65I GGTACC 2 cut(s) 572, 1696
AccB1I GGYRCC 2 cut(s) 572, 1696
AccB7I CCANNNNNTGG 1 cut(s) 2604
AccII CGCG 2 cut(s) 201, 2397
AciI CCGC 7 cut(s) 160, 165, 424, 1275, 1977, 2094, 2395
AclWI GGATC 2 cut(s) 905, 2783
AcsI RAATTY 1 cut(s) 1710
AcuI CTGAAG 5 cut(s) 683, 695, 2217, 2325, 2751
AfaI GTAC 6 cut(s) 574, 821, 1571, 1698, 1781, 2465
AfiI CCNNNNNNNGG 2 cut(s) 334, 2604
AflIII ACRYGT 2 cut(s) 1167, 2079
AhlI ACTAGT 1 cut(s) 1676
AjnI CCWGG 5 cut(s) 333, 341, 576, 1683, 2662
AjuI GAANNNNNNNTTGG 8 cut(s) 36, 68, 228, 260, 530, 562, 2150, 2182
Alw21I GWGCWC 1 cut(s) 2367
Alw26I GTCTC 5 cut(s) 112, 324, 1635, 1788, 2184
AlwI GGATC 2 cut(s) 905, 2783
Ama87I CYCGRG 1 cut(s) 618
AoxI GGCC 3 cut(s) 379, 412, 1671
ApaI GGGCCC 1 cut(s) 383
ApoI RAATTY 1 cut(s) 1710
ArsI GACNNNNNNTTYG 2 cut(s) 269, 301
AseI ATTAAT 1 cut(s) 48
Asp718I GGTACC 2 cut(s) 572, 1696
AspLEI GCGC 5 cut(s) 201, 203, 1810, 1899, 2399
AspS9I GGNCC 5 cut(s) 379, 380, 749, 1231, 2695
AsuC2I CCSGG 1 cut(s) 1701
AsuHPI GGTGA 7 cut(s) 53, 256, 331, 439, 592, 986, 1051
AsuII TTCGAA 1 cut(s) 275
AvaI CYCGRG 1 cut(s) 618
AvaII GGWCC 3 cut(s) 749, 1231, 2695
AxyI CCTNAGG 1 cut(s) 223
BaeGI GKGCMC 1 cut(s) 383
BaeI ACNNNNGTAYC 2 cut(s) 564, 597
BanI GGYRCC 2 cut(s) 572, 1696
BanII GRGCYC 3 cut(s) 383, 1512, 2473
BbsI GAAGAC 1 cut(s) 689
Bbv12I GWGCWC 1 cut(s) 2367
BceAI ACGGC 1 cut(s) 2359
BciT130I CCWGG 5 cut(s) 335, 343, 578, 1685, 2664
BclI TGATCA 1 cut(s) 1336
BcnI CCSGG 1 cut(s) 1701
BcoDI GTCTC 5 cut(s) 112, 324, 1635, 1788, 2184
BcuI ACTAGT 1 cut(s) 1676
BfaI CTAG 6 cut(s) 356, 1235, 1677, 1772, 1877, 2378
BfmI CTRYAG 1 cut(s) 24
BfoI RGCGCY 1 cut(s) 1900
BfuAI ACCTGC 1 cut(s) 273
Bme1390I CCNGG 6 cut(s) 335, 343, 578, 1685, 1701, 2664
Bme18I GGWCC 3 cut(s) 749, 1231, 2695
BmeT110I CYCGRG 1 cut(s) 618
BmgT120I GGNCC 5 cut(s) 379, 380, 749, 1231, 2695
BmiI GGNNCC 5 cut(s) 380, 381, 574, 1509, 1698
BmrFI CCNGG 6 cut(s) 335, 343, 578, 1685, 1701, 2664
BmsI GCATC 8 cut(s) 627, 877, 1402, 2014, 2098, 2441, 2599, 2611
BpiI GAAGAC 1 cut(s) 689
BplI GAGNNNNNCTC 2 cut(s) 2354, 2386
Bpu10I CCTNAGC 3 cut(s) 1668, 1957, 2390
Bpu14I TTCGAA 1 cut(s) 275
BpuMI CCSGG 1 cut(s) 1701
BsaBI GATNNNNATC 2 cut(s) 891, 2112
BsaI GGTCTC 1 cut(s) 324
BsaJI CCNNGG 4 cut(s) 143, 190, 576, 1700
Bsc4I CCNNNNNNNGG 2 cut(s) 334, 2604
Bse1I ACTGG 3 cut(s) 450, 1435, 2602
Bse21I CCTNAGG 1 cut(s) 223
Bse3DI GCAATG 1 cut(s) 168
Bse8I GATNNNNATC 2 cut(s) 891, 2112
BseBI CCWGG 5 cut(s) 335, 343, 578, 1685, 2664
BseDI CCNNGG 4 cut(s) 143, 190, 576, 1700
BseJI GATNNNNATC 2 cut(s) 891, 2112
BseLI CCNNNNNNNGG 2 cut(s) 334, 2604
BseMI GCAATG 1 cut(s) 168
BseMII CTCAG 7 cut(s) 237, 613, 1411, 1881, 1914, 2061, 2346
BseNI ACTGG 3 cut(s) 450, 1435, 2602
BsePI GCGCGC 1 cut(s) 199
BseRI GAGGAG 3 cut(s) 91, 842, 1363
BseSI GKGCMC 1 cut(s) 383
BseYI CCCAGC 2 cut(s) 374, 853
BsgI GTGCAG 1 cut(s) 1818
Bsh1236I CGCG 2 cut(s) 201, 2397
BshFI GGCC 3 cut(s) 381, 414, 1673
BshNI GGYRCC 2 cut(s) 572, 1696
BsiHKAI GWGCWC 1 cut(s) 2367
BsiHKCI CYCGRG 1 cut(s) 618
BsiSI CCGG 2 cut(s) 421, 1700
BslFI GGGAC 3 cut(s) 420, 2513, 2780
BslI CCNNNNNNNGG 2 cut(s) 334, 2604
BsmAI GTCTC 5 cut(s) 112, 324, 1635, 1788, 2184
BsmBI CGTCTC 2 cut(s) 1635, 2184
BsmFI GGGAC 3 cut(s) 420, 2513, 2780
BsmI GAATGC 5 cut(s) 236, 352, 1558, 2164, 2593
BsnI GGCC 3 cut(s) 381, 414, 1673
Bso31I GGTCTC 1 cut(s) 324
BsoBI CYCGRG 1 cut(s) 618
Bsp119I TTCGAA 1 cut(s) 275
Bsp120I GGGCCC 1 cut(s) 379
Bsp1286I GDGCHC 4 cut(s) 383, 1512, 2367, 2473
Bsp1407I TGTACA 2 cut(s) 1779, 2463
Bsp143I GATC 6 cut(s) 238, 910, 1336, 1537, 2358, 2775
Bsp19I CCATGG 1 cut(s) 143
BspACI CCGC 7 cut(s) 160, 165, 424, 1275, 1977, 2094, 2395
BspANI GGCC 3 cut(s) 381, 414, 1673
BspCNI CTCAG 7 cut(s) 236, 612, 1410, 1880, 1913, 2060, 2347
BspFNI CGCG 2 cut(s) 201, 2397
BspHI TCATGA 2 cut(s) 1621, 2223
BspLI GGNNCC 5 cut(s) 380, 381, 574, 1509, 1698
BspMAI CTGCAG 1 cut(s) 28
BspMI ACCTGC 1 cut(s) 273
BspPI GGATC 2 cut(s) 905, 2783
BspT104I TTCGAA 1 cut(s) 275
BspT107I GGYRCC 2 cut(s) 572, 1696
BspTNI GGTCTC 1 cut(s) 324
BsrDI GCAATG 1 cut(s) 168
BsrGI TGTACA 2 cut(s) 1779, 2463
BsrI ACTGG 3 cut(s) 450, 1435, 2602
BssECI CCNNGG 4 cut(s) 143, 190, 576, 1700
BssHII GCGCGC 1 cut(s) 199
BssMI GATC 6 cut(s) 238, 910, 1336, 1537, 2358, 2775
BssT1I CCWWGG 1 cut(s) 143
Bst2UI CCWGG 5 cut(s) 335, 343, 578, 1685, 2664
Bst4CI ACNGT 3 cut(s) 1589, 1663, 1816
Bst6I CTCTTC 4 cut(s) 95, 142, 598, 1383
BstAPI GCANNNNNTGC 2 cut(s) 365, 1664
BstAUI TGTACA 2 cut(s) 1779, 2463
BstBI TTCGAA 1 cut(s) 275
BstC8I GCNNGC 7 cut(s) 201, 301, 1183, 1369, 2281, 2485, 2815
BstDSI CCRYGG 1 cut(s) 143
BstEII GGTNACC 1 cut(s) 337
BstFNI CGCG 2 cut(s) 201, 2397
BstH2I RGCGCY 1 cut(s) 1900
BstHHI GCGC 5 cut(s) 201, 203, 1810, 1899, 2399
BstKTI GATC 6 cut(s) 241, 913, 1339, 1540, 2361, 2778
BstMAI GTCTC 5 cut(s) 112, 324, 1635, 1788, 2184
BstMBI GATC 6 cut(s) 238, 910, 1336, 1537, 2358, 2775
BstMWI GCNNNNNNNGC 7 cut(s) 356, 365, 487, 496, 845, 1664, 2201
BstNI CCWGG 5 cut(s) 335, 343, 578, 1685, 2664
BstNSI RCATGY 3 cut(s) 1171, 2021, 2083
BstPI GGTNACC 1 cut(s) 337
BstSCI CCNGG 6 cut(s) 333, 341, 576, 1683, 1699, 2662
BstSFI CTRYAG 1 cut(s) 24
BstSLI GKGCMC 1 cut(s) 383
BstUI CGCG 2 cut(s) 201, 2397
BstV2I GAAGAC 1 cut(s) 689
BstXI CCANNNNNNTGG 1 cut(s) 2170
Bsu36I CCTNAGG 1 cut(s) 223
BsuRI GGCC 3 cut(s) 381, 414, 1673
BtgI CCRYGG 1 cut(s) 143
BtsIMutI CAGTG 2 cut(s) 1908, 2609
BveI ACCTGC 1 cut(s) 273
Cac8I GCNNGC 7 cut(s) 201, 301, 1183, 1369, 2281, 2485, 2815
CciI TCATGA 2 cut(s) 1621, 2223
CfoI GCGC 5 cut(s) 201, 203, 1810, 1899, 2399
Cfr13I GGNCC 5 cut(s) 379, 380, 749, 1231, 2695
CseI GACGC 1 cut(s) 2201
CsiI ACCWGGT 2 cut(s) 333, 2662
Csp6I GTAC 6 cut(s) 573, 820, 1570, 1697, 1780, 2464
CviQI GTAC 6 cut(s) 573, 820, 1570, 1697, 1780, 2464
DpnI GATC 6 cut(s) 240, 912, 1338, 1539, 2360, 2777
DpnII GATC 6 cut(s) 238, 910, 1336, 1537, 2358, 2775
Eam1104I CTCTTC 4 cut(s) 95, 142, 598, 1383
EarI CTCTTC 4 cut(s) 95, 142, 598, 1383
Eco130I CCWWGG 1 cut(s) 143
Eco24I GRGCYC 3 cut(s) 383, 1512, 2473
Eco31I GGTCTC 1 cut(s) 324
Eco32I GATATC 1 cut(s) 1257
Eco47I GGWCC 3 cut(s) 749, 1231, 2695
Eco57I CTGAAG 5 cut(s) 683, 695, 2217, 2325, 2751
Eco81I CCTNAGG 1 cut(s) 223
Eco88I CYCGRG 1 cut(s) 618
Eco91I GGTNACC 1 cut(s) 337
EcoO109I RGGNCCY 3 cut(s) 379, 380, 749
EcoO65I GGTNACC 1 cut(s) 337
EcoRII CCWGG 5 cut(s) 333, 341, 576, 1683, 2662
EcoRV GATATC 1 cut(s) 1257
EcoT14I CCWWGG 1 cut(s) 143
EcoT22I ATGCAT 2 cut(s) 1558, 2113
EcoT38I GRGCYC 3 cut(s) 383, 1512, 2473
ErhI CCWWGG 1 cut(s) 143
Esp3I CGTCTC 2 cut(s) 1635, 2184
FalI AAGNNNNNCTT 2 cut(s) 696, 728
FaqI GGGAC 3 cut(s) 420, 2513, 2780
FauNDI CATATG 3 cut(s) 295, 682, 841
FbaI TGATCA 1 cut(s) 1336
FriOI GRGCYC 3 cut(s) 383, 1512, 2473
FspAI RTGCGCAY 1 cut(s) 1809
FspBI CTAG 6 cut(s) 356, 1235, 1677, 1772, 1877, 2378
FspI TGCGCA 1 cut(s) 1809
GlaI GCGC 5 cut(s) 200, 202, 1809, 1898, 2398
GsaI CCCAGC 2 cut(s) 378, 857
HaeII RGCGCY 1 cut(s) 1900
HaeIII GGCC 3 cut(s) 381, 414, 1673
HapII CCGG 2 cut(s) 421, 1700
HgaI GACGC 1 cut(s) 2201
HhaI GCGC 5 cut(s) 201, 203, 1810, 1899, 2399
Hin6I GCGC 5 cut(s) 199, 201, 1808, 1897, 2397
HinP1I GCGC 5 cut(s) 199, 201, 1808, 1897, 2397
HincII GTYRAC 3 cut(s) 219, 1759, 2077
HindII GTYRAC 3 cut(s) 219, 1759, 2077
HindIII AAGCTT 2 cut(s) 2307, 2448
HinfI GANTC 9 cut(s) 408, 434, 787, 1102, 1133, 1289, 1618, 2220, 2555
HpaI GTTAAC 2 cut(s) 219, 1759
HpaII CCGG 2 cut(s) 421, 1700
HphI GGTGA 7 cut(s) 53, 256, 331, 439, 592, 986, 1051
Hpy99I CGWCG 1 cut(s) 2631
HpyAV CCTTC 7 cut(s) 670, 803, 1379, 1619, 1886, 2121, 2780
HpyCH4III ACNGT 3 cut(s) 1589, 1663, 1816
HpyF10VI GCNNNNNNNGC 7 cut(s) 356, 365, 487, 496, 845, 1664, 2201
HspAI GCGC 5 cut(s) 199, 201, 1808, 1897, 2397
KpnI GGTACC 2 cut(s) 576, 1700
Ksp22I TGATCA 1 cut(s) 1336
KspAI GTTAAC 2 cut(s) 219, 1759
Kzo9I GATC 6 cut(s) 238, 910, 1336, 1537, 2358, 2775
LmnI GCTCC 3 cut(s) 1376, 1507, 2142
LweI GCATC 8 cut(s) 627, 877, 1402, 2014, 2098, 2441, 2599, 2611
MabI ACCWGGT 2 cut(s) 333, 2662
MaeI CTAG 6 cut(s) 356, 1235, 1677, 1772, 1877, 2378
MaeIII GTNAC 5 cut(s) 337, 527, 1039, 1589, 2254
MalI GATC 6 cut(s) 240, 912, 1338, 1539, 2360, 2777
MboI GATC 6 cut(s) 238, 910, 1336, 1537, 2358, 2775
MfeI CAATTG 1 cut(s) 1347
MhlI GDGCHC 4 cut(s) 383, 1512, 2367, 2473
MlyI GAGTC 4 cut(s) 402, 443, 2229, 2549
MmeI TCCRAC 9 cut(s) 62, 135, 528, 920, 951, 1006, 2016, 2654, 2736
Mph1103I ATGCAT 2 cut(s) 1558, 2113
MseI TTAA 6 cut(s) 48, 218, 609, 1361, 1530, 1758
MslI CAYNNNNRTG 9 cut(s) 266, 738, 762, 1416, 1626, 1719, 1944, 2022, 2168
MspA1I CMGCKG 1 cut(s) 23
MspI CCGG 2 cut(s) 421, 1700
MspR9I CCNGG 6 cut(s) 335, 343, 578, 1685, 1701, 2664
MunI CAATTG 1 cut(s) 1347
Mva1269I GAATGC 5 cut(s) 236, 352, 1558, 2164, 2593
MvaI CCWGG 5 cut(s) 335, 343, 578, 1685, 2664
MvnI CGCG 2 cut(s) 201, 2397
MwoI GCNNNNNNNGC 7 cut(s) 356, 365, 487, 496, 845, 1664, 2201
NciI CCSGG 1 cut(s) 1701
NcoI CCATGG 1 cut(s) 143
NdeI CATATG 3 cut(s) 295, 682, 841
NdeII GATC 6 cut(s) 238, 910, 1336, 1537, 2358, 2775
NlaIV GGNNCC 5 cut(s) 380, 381, 574, 1509, 1698
NmeAIII GCCGAG 1 cut(s) 390
NmuCI GTSAC 3 cut(s) 337, 1039, 1589
NsbI TGCGCA 1 cut(s) 1809
NsiI ATGCAT 2 cut(s) 1558, 2113
NspI RCATGY 3 cut(s) 1171, 2021, 2083
NspV TTCGAA 1 cut(s) 275
PagI TCATGA 2 cut(s) 1621, 2223
PauI GCGCGC 1 cut(s) 199
PciI ACATGT 2 cut(s) 1167, 2079
PctI GAATGC 5 cut(s) 236, 352, 1558, 2164, 2593
PfeI GAWTC 5 cut(s) 787, 1102, 1133, 1289, 1618
PflFI GACNNNGTC 1 cut(s) 335
PflMI CCANNNNNTGG 1 cut(s) 2604
PleI GAGTC 4 cut(s) 402, 442, 2228, 2549
PpsI GAGTC 4 cut(s) 402, 442, 2228, 2549
PpuMI RGGWCCY 1 cut(s) 749
PscI ACATGT 2 cut(s) 1167, 2079
PshBI ATTAAT 1 cut(s) 48
PsiI TTATAA 1 cut(s) 869
Psp5II RGGWCCY 1 cut(s) 749
Psp6I CCWGG 5 cut(s) 333, 341, 576, 1683, 2662
PspEI GGTNACC 1 cut(s) 337
PspFI CCCAGC 2 cut(s) 374, 853
PspGI CCWGG 5 cut(s) 333, 341, 576, 1683, 2662
PspN4I GGNNCC 5 cut(s) 380, 381, 574, 1509, 1698
PspOMI GGGCCC 1 cut(s) 379
PspPI GGNCC 5 cut(s) 379, 380, 749, 1231, 2695
PspPPI RGGWCCY 1 cut(s) 749
PstI CTGCAG 1 cut(s) 28
PsyI GACNNNGTC 1 cut(s) 335
PteI GCGCGC 1 cut(s) 199
PvuII CAGCTG 1 cut(s) 23
RsaI GTAC 6 cut(s) 574, 821, 1571, 1698, 1781, 2465
RsaNI GTAC 6 cut(s) 573, 820, 1570, 1697, 1780, 2464
RseI CAYNNNNRTG 9 cut(s) 266, 738, 762, 1416, 1626, 1719, 1944, 2022, 2168
SaqAI TTAA 6 cut(s) 48, 218, 609, 1361, 1530, 1758
Sau3AI GATC 6 cut(s) 238, 910, 1336, 1537, 2358, 2775
Sau96I GGNCC 5 cut(s) 379, 380, 749, 1231, 2695
SchI GAGTC 4 cut(s) 402, 443, 2229, 2549
ScrFI CCNGG 6 cut(s) 335, 343, 578, 1685, 1701, 2664
SduI GDGCHC 4 cut(s) 383, 1512, 2367, 2473
SexAI ACCWGGT 2 cut(s) 333, 2662
SfaNI GCATC 8 cut(s) 627, 877, 1402, 2014, 2098, 2441, 2599, 2611
SfcI CTRYAG 1 cut(s) 24
SfuI TTCGAA 1 cut(s) 275
SinI GGWCC 3 cut(s) 749, 1231, 2695
SmiMI CAYNNNNRTG 9 cut(s) 266, 738, 762, 1416, 1626, 1719, 1944, 2022, 2168
SpeI ACTAGT 1 cut(s) 1676
SsiI CCGC 7 cut(s) 160, 165, 424, 1275, 1977, 2094, 2395
SspI AATATT 1 cut(s) 2042
SspMI CTAG 6 cut(s) 356, 1235, 1677, 1772, 1877, 2378
StyD4I CCNGG 6 cut(s) 333, 341, 576, 1683, 1699, 2662
StyI CCWWGG 1 cut(s) 143
TaaI ACNGT 3 cut(s) 1589, 1663, 1816
TaqI TCGA 7 cut(s) 275, 312, 1019, 1250, 1536, 2361, 2626
TaqII GACCGA 1 cut(s) 342
TatI WGTACW 2 cut(s) 1779, 2463
TauI GCSGC 3 cut(s) 427, 1979, 2397
TfiI GAWTC 5 cut(s) 787, 1102, 1133, 1289, 1618
Tru1I TTAA 6 cut(s) 48, 218, 609, 1361, 1530, 1758
Tru9I TTAA 6 cut(s) 48, 218, 609, 1361, 1530, 1758
TscAI CASTG 2 cut(s) 1908, 2609
TseFI GTSAC 3 cut(s) 337, 1039, 1589
Tsp45I GTSAC 3 cut(s) 337, 1039, 1589
TspGWI ACGGA 1 cut(s) 460
TspRI CASTG 2 cut(s) 1908, 2609
Tth111I GACNNNGTC 1 cut(s) 335
Van91I CCANNNNNTGG 1 cut(s) 2604
VpaK11BI GGWCC 3 cut(s) 749, 1231, 2695
VspI ATTAAT 1 cut(s) 48
XapI RAATTY 1 cut(s) 1710
XbaI TCTAGA 2 cut(s) 1771, 1876
XceI RCATGY 3 cut(s) 1171, 2021, 2083
XcmI CCANNNNNNNNNTGG 2 cut(s) 1681, 2670
XspI CTAG 6 cut(s) 356, 1235, 1677, 1772, 1877, 2378
Zsp2I ATGCAT 2 cut(s) 1558, 2113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.