Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0131821 RchiOBHm_Chr2g0162631 RchiOBHm_Chr4g0410331 RchiOBHm_Chr4g0420191 RchiOBHm_Chr5g0010521 |
| rosa_laevigata | RLG00000016801 RLG00000023312 |
| rosa_roxburghii | Rroxscaffold_2G00085420 |
| rosa_samantha | Rh1AG135000 Rh1AG162200 Rh1AG256800 Rh1AG295900 Rh1CG151700 Rh1DG235900 Rh2BG384100 Rh2CG632200 Rh3BG375400 Rh3CG255600 Rh5AG535000 Rh5DG090700 Rh5DG473500 Rh6AG293000 Rh7BG431900 |
| rosa_wichuraiana | Rw2G003760 Rw5G026980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 2 cut(s) | 22, 110 |
| Bse3DI | GCAATG | 1 cut(s) | 75 |
| BseMI | GCAATG | 1 cut(s) | 75 |
| BsrDI | GCAATG | 1 cut(s) | 75 |
| CviJI | RGCY | 3 cut(s) | 26, 58, 102 |
| CviKI_1 | RGCY | 3 cut(s) | 26, 58, 102 |
| FaiI | YATR | 1 cut(s) | 87 |
| FspEI | CC | 9 cut(s) | 8, 34, 37, 53, 72, 94, 97, 105, 116 |
| HincII | GTYRAC | 1 cut(s) | 31 |
| HindII | GTYRAC | 1 cut(s) | 31 |
| Hpy166II | GTNNAC | 2 cut(s) | 31, 73 |
| Hpy188I | TCNGA | 1 cut(s) | 39 |
| Hpy8I | GTNNAC | 2 cut(s) | 31, 73 |
| HpyAV | CCTTC | 1 cut(s) | 16 |
| LpnPI | CCDG | 3 cut(s) | 72, 105, 116 |
| MnlI | CCTC | 1 cut(s) | 45 |
| MseI | TTAA | 1 cut(s) | 5 |
| SaqAI | TTAA | 1 cut(s) | 5 |
| SetI | ASST | 2 cut(s) | 18, 86 |
| SgeI | CNNG | 4 cut(s) | 26, 58, 71, 115 |
| TaqI | TCGA | 1 cut(s) | 9 |
| Tru1I | TTAA | 1 cut(s) | 5 |
| Tru9I | TTAA | 1 cut(s) | 5 |