protein At5g03900, chloroplastic-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0131821 RchiOBHm_Chr2g0162631 RchiOBHm_Chr4g0410331 RchiOBHm_Chr4g0420191 RchiOBHm_Chr5g0010521 |
| rosa_laevigata | RLG00000016801 RLG00000023312 |
| rosa_roxburghii | Rroxscaffold_2G00085420 |
| rosa_samantha | Rh1AG135000 Rh1AG162200 Rh1AG256800 Rh1AG295900 Rh1CG151700 Rh1DG235900 Rh2BG384100 Rh2CG632200 Rh3BG375400 Rh3CG255600 Rh5AG535000 Rh5DG090700 Rh5DG473500 Rh6AG293000 Rh7BG431900 |
| rosa_wichuraiana | Rw2G003760 Rw5G026980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 296 |
| AcoI | YGGCCR | 1 cut(s) | 136 |
| AfaI | GTAC | 1 cut(s) | 55 |
| AluBI | AGCT | 3 cut(s) | 37, 227, 325 |
| AluI | AGCT | 3 cut(s) | 37, 227, 325 |
| AoxI | GGCC | 1 cut(s) | 136 |
| ApeKI | GCWGC | 1 cut(s) | 322 |
| BauI | CACGAG | 1 cut(s) | 6 |
| BbvI | GCAGC | 1 cut(s) | 334 |
| BfaI | CTAG | 2 cut(s) | 224, 228 |
| BisI | GCNGC | 1 cut(s) | 323 |
| BlsI | GCNGC | 1 cut(s) | 324 |
| BpuEI | CTTGAG | 1 cut(s) | 176 |
| Bse1I | ACTGG | 1 cut(s) | 175 |
| Bse3DI | GCAATG | 1 cut(s) | 111 |
| BseGI | GGATG | 1 cut(s) | 352 |
| BseMI | GCAATG | 1 cut(s) | 111 |
| BseNI | ACTGG | 1 cut(s) | 175 |
| BseXI | GCAGC | 1 cut(s) | 334 |
| BshFI | GGCC | 1 cut(s) | 138 |
| BsnI | GGCC | 1 cut(s) | 138 |
| Bsp143I | GATC | 1 cut(s) | 262 |
| BspANI | GGCC | 1 cut(s) | 138 |
| BsrDI | GCAATG | 1 cut(s) | 111 |
| BsrI | ACTGG | 1 cut(s) | 175 |
| BssMI | GATC | 1 cut(s) | 262 |
| BssSI | CACGAG | 1 cut(s) | 6 |
| Bst2BI | CACGAG | 1 cut(s) | 6 |
| Bst6I | CTCTTC | 1 cut(s) | 331 |
| BstDEI | CTNAG | 1 cut(s) | 272 |
| BstF5I | GGATG | 1 cut(s) | 352 |
| BstKTI | GATC | 1 cut(s) | 265 |
| BstMBI | GATC | 1 cut(s) | 262 |
| BstV1I | GCAGC | 1 cut(s) | 334 |
| BsuRI | GGCC | 1 cut(s) | 138 |
| BtsCI | GGATG | 1 cut(s) | 352 |
| BtsIMutI | CAGTG | 1 cut(s) | 182 |
| Csp6I | GTAC | 1 cut(s) | 54 |
| CviJI | RGCY | 5 cut(s) | 37, 94, 138, 227, 325 |
| CviKI_1 | RGCY | 5 cut(s) | 37, 94, 138, 227, 325 |
| CviQI | GTAC | 1 cut(s) | 54 |
| DdeI | CTNAG | 1 cut(s) | 272 |
| DpnI | GATC | 1 cut(s) | 264 |
| DpnII | GATC | 1 cut(s) | 262 |
| EaeI | YGGCCR | 1 cut(s) | 136 |
| Eam1104I | CTCTTC | 1 cut(s) | 331 |
| EarI | CTCTTC | 1 cut(s) | 331 |
| FaiI | YATR | 5 cut(s) | 33, 47, 123, 147, 209 |
| Fnu4HI | GCNGC | 1 cut(s) | 323 |
| Fsp4HI | GCNGC | 1 cut(s) | 323 |
| FspBI | CTAG | 2 cut(s) | 224, 228 |
| GluI | GCNGC | 1 cut(s) | 323 |
| HaeIII | GGCC | 1 cut(s) | 138 |
| HinfI | GANTC | 1 cut(s) | 339 |
| Hpy166II | GTNNAC | 1 cut(s) | 109 |
| Hpy188I | TCNGA | 1 cut(s) | 262 |
| Hpy188III | TCNNGA | 1 cut(s) | 193 |
| Hpy8I | GTNNAC | 1 cut(s) | 109 |
| HpyAV | CCTTC | 1 cut(s) | 308 |
| HpyCH4IV | ACGT | 1 cut(s) | 296 |
| HpyCH4V | TGCA | 3 cut(s) | 88, 302, 322 |
| HpyF3I | CTNAG | 1 cut(s) | 272 |
| HpySE526I | ACGT | 1 cut(s) | 296 |
| Kzo9I | GATC | 1 cut(s) | 262 |
| LpnPI | CCDG | 5 cut(s) | 108, 135, 152, 188, 318 |
| Lsp1109I | GCAGC | 1 cut(s) | 334 |
| MaeI | CTAG | 2 cut(s) | 224, 228 |
| MaeII | ACGT | 1 cut(s) | 296 |
| MalI | GATC | 1 cut(s) | 264 |
| MboI | GATC | 1 cut(s) | 262 |
| MboII | GAAGA | 1 cut(s) | 348 |
| MluCI | AATT | 3 cut(s) | 162, 236, 254 |
| MlyI | GAGTC | 1 cut(s) | 348 |
| MnlI | CCTC | 2 cut(s) | 79, 177 |
| MseI | TTAA | 1 cut(s) | 352 |
| NdeII | GATC | 1 cut(s) | 262 |
| PkrI | GCNGC | 1 cut(s) | 324 |
| PleI | GAGTC | 1 cut(s) | 347 |
| PpsI | GAGTC | 1 cut(s) | 347 |
| Psp1406I | AACGTT | 1 cut(s) | 296 |
| RsaI | GTAC | 1 cut(s) | 55 |
| RsaNI | GTAC | 1 cut(s) | 54 |
| SaqAI | TTAA | 1 cut(s) | 352 |
| SatI | GCNGC | 1 cut(s) | 323 |
| Sau3AI | GATC | 1 cut(s) | 262 |
| SchI | GAGTC | 1 cut(s) | 348 |
| SetI | ASST | 6 cut(s) | 39, 122, 229, 285, 299, 327 |
| SmlI | CTYRAG | 1 cut(s) | 191 |
| SmoI | CTYRAG | 1 cut(s) | 191 |
| Sse9I | AATT | 3 cut(s) | 162, 236, 254 |
| SspMI | CTAG | 2 cut(s) | 224, 228 |
| TaiI | ACGT | 1 cut(s) | 299 |
| TasI | AATT | 3 cut(s) | 162, 236, 254 |
| Tru1I | TTAA | 1 cut(s) | 352 |
| Tru9I | TTAA | 1 cut(s) | 352 |
| TscAI | CASTG | 1 cut(s) | 182 |
| TseI | GCWGC | 1 cut(s) | 322 |
| TspDTI | ATGAA | 3 cut(s) | 12, 144, 267 |
| TspRI | CASTG | 1 cut(s) | 182 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 146 |
| XspI | CTAG | 2 cut(s) | 224, 228 |